ORGANO-METALLIC FRAMEWORKS AND METHODS OF MAKING SAME

Information

  • Patent Application
  • 20120259117
  • Publication Number
    20120259117
  • Date Filed
    June 19, 2010
    14 years ago
  • Date Published
    October 11, 2012
    12 years ago
Abstract
The disclosure provides organic frameworks comprising increased stability.
Description
TECHNICAL FIELD

The disclosure provides organometallic frameworks for gas separation, storage, and for use as sensors with chemical stability.


BACKGROUND

Frameworks for gas separation, storage and purification are important.


SUMMARY

The disclosure provides chemically stable open frameworks comprising designated elements including, but not limited to, zirconium, titanium, aluminum, and magnesium ions. The disclosure encompasses all open framework materials that are constructed from organic links bridged by multidentate organic or inorganic cores. Including all classes of open framework materials; covalent organic frameworks (COFs), zeolitic imidazolate frameworks (ZIFs) and metal organic frameworks (MOFs) and all possible resulting net topologies as described within the reticular chemistry structure resource (http://rcsr.anu.edu.au/). The disclosure provides stable frameworks utilizing these materials in industrial harsh conditions. Such material will have a variety of uses in applications such as gas storage and separation, chemical and biological sensing, molecular reorganization and catalysis.


The disclosure provides an organo-metallic framework comprising the general structure M-L-M, wherein M is a framework metal and wherein L is a linking moiety having an heterocyclic carbene or an imine group linked to a modifying metal. In one embodiment, the imine group comprises a chelating group. In yet another embodiment, the linking moiety is metallated prior to reacting with the framework metal. In yet a further embodiment, the linking moiety comprises an N-heterocyclic carbene. In one embodiment, the framework comprises a covalent organic framework (COF), a zeolitic imidizole framework (ZIF), or a metal organic framework (MOF). In yet another embodiment, the imine group is post-framework chelated to a metal. In one embodiment, the framework metal is selected from the group consisting of Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, W3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si4+, Si2+, Ge4+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+. In yet another embodiment, the modifying metal is selected from the group consisting of Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, W3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si4+, Si 2+, Ge4+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+. In yet a further embodiment, the modifying metal extends into a pore of the framework. In some embodiments the framework comprises a guest species, however, in other embodiments, the framework lacks a guest species while remaining stable.


The disclosure provides a method of making an organo-metallic framework described above comprising reacting a linking moiety comprising a heterocyclic carbene and comprising a protected linking cluster with a modifying metal to obtain a metallated linking moiety, deprotecting the linking cluster and reacting the metallated linking moiety with a framework metal.


The disclosure also provides a method of making an organo-metallic framework comprising reacting an organic framework comprising an amine group with a 2-pyridinecarboxaldehyde to obtain an imine functionalized linking moiety and contacting the framework with a metal that chelates to the imine functionalized linking moiety.


The organo-metallic frameworks of the disclosure are useful for gas separation and catalysis. Accordingly, the disclosure provides gas sorption materials and devices comprising an organo-metallic framework of the disclosure as well as catalytic compositions and devices.


The details of one or more embodiments of the invention are set forth in the accompanying drawings and the description below. Other features, objects, and advantages of the invention will be apparent from the description and drawings, and from the claims.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1 shows PXRD patterns for A, B, and C along with a simulated pattern for A (bottom).



FIG. 2 shows Ar gas adsorption isotherms for A (solid circles top portion of graph), B (open circles top portion), and C (lower line) at 87 K, with adsorption and desorption points represented by solid and open circles, respectively.



FIG. 3 shows Pd K-edge EXAFS Fourier transforms and (inset) EXAFS spectra for C. Solid lines show the experimental data and dotted lines show the best fits using the parameters given in Table 1.



FIG. 4 shows Pd K-edge near edge spectra of: Dichloro(N-(2-pyridylmethylene)aniline-N,N′)Palladium(II) (a) (Zn4O)3(BDC—C6H5N2PdCl2)3(BTB)4 (b) and PdCl2(CH3CN) (c).



FIG. 5 shows ESI mass spectrum of imine ligand fragment.



FIG. 6A-C show structures of IRMOF-76 and -77. (a) Single crystal structure of IRMOF-76 (Zn4O(C23H15N2O4)3 (X═BF4, PF6, OH)). (b) Single crystal structure of IRMOF-77 (Zn4O(C28H21I2N3O4Pd)3) shown with only one pcu net. Atom colors: tetrahedron: Zn, I, Pd, O, sphere: N. The spheres represent the largest spheres that would occupy the cavity without contacting the interior van der Waals surface for IRMOF-76 and the single framework of IRMOF-77 (ca. 19 Å and 15 Å, respectively). All hydrogen atoms, counter-anions (X), and guest molecules have been omitted for clarity. (c) Space-filling illustration of IRMOF-77. Two interwoven pcu nets are shown with blue and gold colors, respectively.



FIG. 7 shows N2 isotherm measurements for IRMOF-77 measured at 77 K.



FIG. 8 shows PXRD patterns of as-synthesized IRMOF-77 (middle), quinoline-exchanged IRMOF-77 (bottom), and simulated PXRD pattern from single crystal X-ray structure (top).



FIG. 9 is an ORTEP drawing of the asymmetric unit of the IRMOF-76. All ellipsoids are displayed at the 10% probability level except for hydrogen atoms.



FIG. 10 is an ORTEP drawing of the IRMOF-77, with a half of Zn4O unit and one link. All ellipsoids are displayed at the 30% probability level except for hydrogen atoms.



FIG. 11 shows PXRD patterns of as-synthesized IRMOF-76 (black) and simulated IRMOF-15, 16 (blue and red, respectively) from single crystal X-ray structures.



FIG. 12 is a TGA trace of as-synthesized IRMOF-76. The huge weight loss up to 150° C. corresponds to the loss of guest solvents (DMF, H2O). A significant weight loss from 300 to 400° C. indicates the decomposition of the material.



FIG. 13 is a TGA trace of as-synthesized IRMOF-77. The huge weight loss up to 150° C. corresponds to the loss of guest solvents (DEF, pyridine, and H2O). Presumably the material loses coordinated molecules (pyridines) up to 250° C., and a significant weight loss from 300 to 400° C. indicates the decomposition of the material.



FIG. 14 is a TGA trace of activated IRMOF-77. The weight loss around 180° C. is attributed to the partial loss of coordinated pyridine (calcd. 8.6% for full loss).



FIG. 15 is a TGA trace of organometallic linker L1. The weight loss (9.7%) up to 250° C. is in accordance with the loss of pyridine (calcd. 9.3%) to form dimer S4.



FIG. 16 shows an activated Zr-MOF.



FIG. 17 shows a stability test in the presence of various chemicals.



FIG. 18 shows reactions useful for generating imines as chelators.



FIG. 19 shows a reversible imine formation in a framework.



FIG. 20 shows PXRD data for imines.



FIG. 21 shows solid state NMR data for imines.



FIG. 22A-B shows SA of imine reactions.



FIG. 23 shows data on reversal of imine reactions.



FIG. 24 shows ligands useful in the methods and compositions of the disclosure.





DETAILED DESCRIPTION

As used herein and in the appended claims, the singular forms “a,” “and,” and “the” include plural referents unless the context clearly dictates otherwise. Thus, for example, reference to “a framework” includes a plurality of such frameworks and reference to “the metal” includes reference to one or more metals and equivalents thereof known to those skilled in the art, and so forth.


Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood to one of ordinary skill in the art to which this disclosure belongs. Although any methods and reagents similar or equivalent to those described herein can be used in the practice of the disclosed methods and compositions, the exemplary methods and materials are now described.


Also, the use of “or” means “and/or” unless stated otherwise. Similarly, “comprise,” “comprises,” “comprising” “include,” “includes,” and “including” are interchangeable and not intended to be limiting.


It is to be further understood that where descriptions of various embodiments use the term “comprising,” those skilled in the art would understand that in some specific instances, an embodiment can be alternatively described using language “consisting essentially of” or “consisting of.”


All publications mentioned herein are incorporated herein by reference in full for the purpose of describing and disclosing the methodologies, which are described in the publications, which might be used in connection with the description herein. The publications discussed above and throughout the text are provided solely for their disclosure prior to the filing date of the present application. Nothing herein is to be construed as an admission that the inventors are not entitled to antedate such disclosure by virtue of prior disclosure.


Metal-organic frameworks (MOFs) have been synthesized in the art, however, these prior MOFs lack chemical stability or suffer from low porosity and restricted cages/channels, which drastically limit their use in industry.


Precise control of functionality in metal complexes is commonly achieved in molecular coordination chemistry. Developing the analogous chemistry within extended crystalline structures remains a challenge because of their tendency to lose order and connectivity when subjected to chemical reactions. Metal-organic frameworks (MOFs) are ideal candidates for performing coordination chemistry in extended structures because of their highly ordered nature and the flexibility with which the organic links can be modified. This is exemplified by the successful application of the isoreticular principle, where the functionality and metrics of an extended porous structure can be altered without changing its underlying topology.


The disclosure provides a method of generating organo-metallic frameworks via two methods. A first method utilizes a post-framework synthesis reaction, wherein a reactive side-group a linking ligand serves as a metal chelator to chelate a metal into the framework. The second method utilizes a pre-framework synthesis methodology wherein the linking ligand is modified to comprise a metal, wherein the metal-ligand is then reacted to form the framework. The disclosure also includes compositions that result from these methods as well as devices incorporating the compositions.


The disclosure provides a method of generating stable organo-metallic frameworks comprising MOFs, ZIFs, or COFs using a sequence of chemical reactions. One advantage of the frameworks of the disclosure is that the desired metal centers and organic links can be easily incorporated so that the porosity, functionality and channel environment can be readily adjusted and tuned for targeted functions and application.


In one embodiment of the invention, the disclosure provides a precursor organic framework comprising a linking moiety having a reactive side group useful for chelating a metal. In one embodiment, the reactive side group comprises an amine group. The precursor organic framework can then be reacted with a metal to form an organo-metallic framework through reaction of the framework with a post-framework reaction chelating process.


The disclosure demonstrates that MOF material, chosen from the vast number reported in the literature, can be subjected to a sequence of chemical reactions to make a covalently bound chelating ligand, which can subsequently be used for the complexation of Pd(II). The framework comprising the chelated metal can then be further reacted to incorporate additional functionality (e.g., space constraints, charge and the like) oto the pores of the framework.


As an example, crystals of (Zn4O)3(BDC—NH2)3(BTB)4 (A) (Scheme 1) were reacted with 2-pyridinecarboxaldehyde to form the covalently bound iminopyridine chelate derivative (Zn4O)3—(BDC—C6H5N2)3(BTB)4 (B), which was reacted with PdCl2(CH3CN)2 to give the metal-complexed MOF (Zn4O)3(BDC—C6H5N2PdCl2)3—(BTB)4 (C). These reactions and their respective products were achieved without loss of structural order or framework connectivity. This isoreticular metalation is a significant first step in harnessing the intrinsic advantages of molecular coordination chemistry for functionalization of extended solids. The metal-complexed MOF, can then serve as an building block for additional reactions of the chelated-metal to form further functionalized frameworks.




text missing or illegible when filed


Two reports on covalent metalation describe materials that have not been demonstrated to be permanently porous. The strategy delineated in Scheme 1 overcomes these limitations. Iminopyridine moieties have proved to be a versatile ligand system for binding a variety of transition metals in known coordination environments. The disclosure incorporates such a moiety through condensation of the amine-functionalized framework and 2-pyridinecarboxaldehyde (Scheme 1).


In yet another embodiment of the invention, the disclosure provides an alternative method for generating organo-metallic frameworks. In this embodiment, covalently linked organometallic complexes within the pores of MOFs are generated. The method metalates a reactive carbene on a linking ligand, followed by deprotecting the linking clusters and reacting the metalated linking ligand with a metal. For example, a carbene (NHC) 5 precursor is metalated (L1, Scheme 2) and then assembled into the desired metalated MOF structure (e.g., IRMOF-77, Scheme 2). Also demonstrated by the disclosure is that these metalated MOFs can be further modified to increase the functionality (size, charge etc.) of the pores of the framework.

  • Scheme 2: Convergent synthesis of new dicarboxylic acid links (L0, L1) and preparation of IRMOF-76, 77:




embedded image


In one embodiment, the methods of the disclosure utilize process depicted in Scheme 3 to produce an organo-metallic MOF.




embedded image


The term “cluster” refers to identifiable associations of 2 or more atoms. Such associations are typically established by some type of bond-ionic, covalent, Van der Waal, and the like.


A “linking cluster” refers to one or more reactive species capable of condensation comprising an atom capable of forming a bond between a linking moiety substructure and a metal group or between a linking moiety and another linking moiety. Examples of such species are selected from the group consisting of boron, oxygen, carbon, nitrogen, and phosphorous atoms. In some embodiments, the linking cluster may comprise one or more different reactive species capable of forming a link with a bridging oxygen atom. For example, a linking cluster can comprise CO2H, CS2H, NO2, SO3H, Si(OH)3, Ge(OH)3, Sn(OH)3, Si(SH)4, Ge(SH)4, Sn(SH)4, PO3H, AsO3H, AsO4H, P(SH)3, As(SH)3, CH(RSH)2, C(RSH)3, CH(RNH2)2, C(RNH2)3, CH(ROH)2, C(ROH)3, CH(RCN)2, C(RCN)3, CH(SH)2, C(SH)3, CH(NH2)2, C(NH2)3, CH(OH)2, C(OH)3, CH(CN)2, and C(CN)3, wherein R is an alkyl group having from 1 to 5 carbon atoms, or an aryl group comprising 1 to 2 pheny rings and CH(SH)2, C(SH)3, CH(NH2)2, C(NH2)3, CH(OH)2, C(OH)3, CH(CN)2, and C(CN)3. Typically ligans for MOFs contain carboxylic acid functional grapus. The disclosure includes cycloalkyl or aryl substructures that comprise 1 to 5 rings that consist either of all carbon or a mixture of carbon, with nitrogen, oxygen, sulfur, boron, phosphorous, silicon and aluminum atoms making up the ring.


A “linking moiety” refers to a mono-dentate or polydentate compound that bind a transition metal or a plurality of transition metals, respectively. Generally a linking moiety comprises a substructure comprising an alkyl or cycloalkyl group, comprising 1 to 20 carbon atoms, an aryl group comprising 1 to 5 phenyl rings, or an alkyl or aryl amine comprising alkyl or cycloalkyl groups having from 1 to 20 carbon atoms or aryl groups comprising 1 to 5 phenyl rings, and in which a linking cluster (e.g., a multidentate function groups) are covalently bound to the substructure. A cycloalkyl or aryl substructure may comprise 1 to 5 rings that comprise either of all carbon or a mixture of carbon with nitrogen, oxygen, sulfur, boron, phosphorus, silicon and/or aluminum atoms making up the ring. Typically the linking moiety will comprise a substructure having one or more carboxylic acid linking clusters covalently attached. In some embodiments the carboxylic acid cluster may be protected during certain reactions and then deprotected prior to reaction with a metal.


As used herein, a line in a chemical formula with an atom on one end and nothing on the other end means that the formula refers to a chemical fragment that is bonded to another entity on the end without an atom attached. Sometimes for emphasis, a wavy line will intersect the line.


In one aspect, the linking moiety substructure is selected from any of the following:




embedded image


In specific embodiments, the linking moiety has a structure:




embedded image


Other linking moieties include those set forth below:




embedded image




embedded image


embedded image


wherein R1-R15 is H, NH2, COOH, CN, NO2, F, Cl, Br, I, S, O, SH, SO3H, PO3H2, OH, CHO, CS2H, SO3H, Si(OH)3, Ge(OH)3, Sn(OH)3, Si(SH)4, Ge(SH)4, PO3H, AsO3H, AsO4H, P(SH)3, As(SH)3, CH(RSH)2, C(RSH)3, CH(RNH2)2, C(RNH2)3, CH(ROH)2, C(ROH)3, CH(RCN)2, C(RCN)3,




embedded image


wherein X=1, 2, or 3.


Multidentate cores of the disclosure can comprise substituted or unsubstituted aromatic rings, substituted or unsubstituted heteroaromatic rings, substituted or unsubstituted nonaromatic rings, substituted or unsubstituted nonaromatic heterocyclic rings, or saturated or unsaturated, substituted or unsubstituted, hydrocarbon groups. The saturated or unsaturated hydrocarbon groups may include one or more heteroatoms. For example, the multidentate core can comprise the following examples:




embedded image


wherein R1-R15 are each independently H, alkyl, aryl, OH, alkoxy, alkenes, alkynes, phenyl and substitutions of the foregoing, sulfur-containing groups (e.g., thioalkoxy), silicon-containing groups, nitrogen-containing groups (e.g., amides), oxygen-containing groups (e.g., ketones, and aldehydes), halogen, nitro, amino, cyano, boron-containing groups, phosphorous-containing groups, carboxylic acids, or esters, A1, A2, A3, A4, A5 and A6 are each independently absent or any atom or group capable of forming a stable ring structure, and T is a tetrahedral atom(e.g., a carbon, silicon, germanium, tin and the like) or a tetrahedral group or cluster.


Linking moieties for MOF structure that may be functionalized to include a reactive imine group for chelating a metal include those below:




embedded image


embedded image


wherein R1-R15 are selected from: H, NH2, CN, OH, ═O, ═S, Cl, I, F,




embedded image


wherein X=1, 2, or 3. In certain embodiments, the R group is imine functionalized to promote chelating of a post-synthesis metal.


Linking moieties for ZIF structures that may be functionalized to include a reactive imine group or which may be modified to form an N-heterocyclic carbene for include those below:




embedded image


R1-R5

H , NH2, COOH, CN, NO2, F, Cl, Br, I, S, O, SH, SO3H.PO3H2.OH, CHO, CS2H.SO3H, Si(OH)3, Ge(OH)3, Sn(OH)3, Si(SH)4, Ge(SH)4, Sn(SH)4, PO3H, AsO3H, AsO4H, P(SH)3, As(SH)3, CH(RSH)2, C(RSH)3, CH(RNH2)2.C(RNH2)3, CH(ROH)2, C(ROH)3, CH(RCH)2, C(RCN)3,




embedded image


Linking moieties for COF structures that may be functionalized to include a reactive imine group or which may be modified to form an N-heterocyclic carbene for include those below:




embedded image


wherein R1-R15 are each independently H, alkyl, aryl, OH, alkoxy, alkenes, alkynes, phenyl and substitutions of the foregoing, sulfur-containing groups (e.g., thioalkoxy), silicon-containing groups, nitrogen-containing groups (e.g., amides), oxygen-containing groups (e.g., ketones, and aldehydes), halogen, nitro, amino, cyano, boron-containing groups, phosphorous-containing groups, carboxylic acids, or esters, A1, A2, A3, A4, A5 and A6 are each independently absent or any atom or group capable of forming a stable ring structure, and T is a tetrahedral atom(e.g., a carbon, silicon, germanium, tin and the like) or a tetrahedral group or cluster.


All the aforementioned organic links that possess appropriate reactive functionalities can be chemically transformed by a suitable reactant post framework synthesis to further functionalize the pores. by modifying the organic links within the framework post-synthetically, access to functional groups that were previously inaccessible or accessible only through great difficulty and/or cost is possible and facile. Post framework reactants include all known organic transformations and their respective reactants; rings of 1-20 carbons with functional groups including atoms such as N, S, O. In a specific embodiment, the post-framework reactant is used to generate a chelating group for the addition of a metal. The disclosure includes the chelation of all metals that may chelate to and add a functional group or a combination of previously existing and newly added functional groups. All reactions that result in tethering an organometallic complex to the framework for use, for example, as a heterogenous catalyst.


In addition, metal and metal containing compounds that may chelate to and add functional groups or a combination of previously existing and newly added functional groups are also useful. Reaction that result in the tethering of organometallic complexes to the framework for use as, for example, a heterogeneous catalyst can be used. Examples of post framework reactants include, but are not limited to, heterocyclic compounds. In one embodiment, the post framework reactant can be a saturated or unsaturated heterocycle. The term “heterocycle” used alone or as a suffix or prefix, refers to a ring-containing structure or molecule having one or more multivalent heteroatoms, independently selected from N, O and S, as a part of the ring structure and including at least 3 and up to about 20 atoms in the ring(s).


Heterocycle may be saturated or unsaturated, containing one or more double bonds, and heterocycle may contain more than one ring. When a heterocycle contains more than one ring, the rings may be fused or unfused. Fused rings generally refer to at least two rings share two atoms therebetween. Heterocycle may have aromatic character or may not have aromatic character. The terms “heterocyclic group”, “heterocyclic moiety”, “heterocyclic”, or “heterocyclo” used alone or as a suffix or prefix, refers to a radical derived from a heterocycle by removing one or more hydrogens therefrom. The term “heterocyclyl” used alone or as a suffix or prefix, refers a monovalent radical derived from a heterocycle by removing one hydrogen therefrom. The term “heteroaryl” used alone or as a suffix or prefix, refers to a heterocyclyl having aromatic character. Heterocycle includes, for example, monocyclic heterocycles such as: aziridine, oxirane, thiirane, azetidine, oxetane, thietane, pyrrolidine, pyrroline, imidazolidine, pyrazolidine, pyrazoline, dioxolane, sulfolane 2,3-dihydrofuran, 2,5-dihydrofuran tetrahydrofuran, thiophane, piperidine, 1,2,3,6-tetrahydro-pyridine, piperazine, morpholine, thiomorpholine, pyran, thiopyran, 2,3-dihydropyran, tetrahydropyran, 1,4-dihydropyridine, 1,4-dioxane, 1,3-dioxane, dioxane, homopiperidine, 2,3,4,7-tetrahydro-1H-azepine homopiperazine, 1,3-dioxepane, 4,7-dihydro-1,3-dioxepin, and hexamethylene oxide. In addition, heterocycle includes aromatic heterocycles (heteroaryl groups), for example, pyridine, pyrazine, pyrimidine, pyridazine, thiophene, furan, furazan, pyrrole, imidazole, thiazole, oxazole, pyrazole, isothiazole, isoxazole, 1,2,3-triazole, tetrazole, 1,2,3-thiadiazole, 1,2,3-oxadiazole, 1,2,4-triazole, 1,2,4-thiadiazole, 1,2,4-oxadiazole, 1,3,4-triazole, 1,3,4-thiadiazole, and 1,3,4-oxadiazole.


Additionally, heterocycle encompass polycyclic heterocycles, for example, indole, indoline, isoindoline, quinoline, tetrahydroquinoline, isoquinoline, tetrahydroisoquinoline, 1,4-benzodioxan, coumarin, dihydrocoumarin, benzofuran, 2,3-dihydrobenzofuran, isobenzofuran, chromene, chroman, isochroman, xanthene, phenoxathiin, thianthrene, indolizine, isoindole, indazole, purine, phthalazine, naphthyridine, quinoxaline, quinazoline, cinnoline, pteridine, phenanthridine, perimidine, phenanthroline, phenazine, phenothiazine, phenoxazine, 1,2-benzisoxazole, benzothiophene, benzoxazole, benzthiazole, benzimidazole, benztriazole, thioxanthine, carbazole, carboline, acridine, pyrolizidine, and quinolizidine.


In addition to the polycyclic heterocycles described above, heterocycle includes polycyclic heterocycles wherein the ring fusion between two or more rings includes more than one bond common to both rings and more than two atoms common to both rings. Examples of such bridged heterocycles include quinuclidine, diazabicyclo[2.2.1]heptane and 7-oxabicyclo[2.2.1]heptane.


Heterocyclyl includes, for example, monocyclic heterocyclyls, such as: aziridinyl, oxiranyl, thiiranyl, azetidinyl, oxetanyl, thietanyl, pyrrolidinyl, pyrrolinyl, imidazolidinyl, pyrazolidinyl, pyrazolinyl, dioxolanyl, sulfolanyl, 2,3-dihydrofuranyl, 2,5-dihydrofuranyl, tetrahydrofuranyl, thiophanyl, piperidinyl, 1,2,3,6-tetrahydro-pyridinyl, piperazinyl, morpholinyl, thiomorpholinyl, pyranyl, thiopyranyl, 2,3-dihydropyranyl, tetrahydropyranyl, 1,4-dihydropyridinyl, 1,4-dioxanyl, 1,3-dioxanyl, dioxanyl, homopiperidinyl, 2,3,4, 7-tetrahydro-1H-azepinyl, homopiperazinyl, 1,3-dioxepanyl, 4,7-dihydro-1,3-dioxepinyl, and hexamethylene oxidyl.


In addition, heterocyclyl includes aromatic heterocyclyls or heteroaryl, for example, pyridinyl, pyrazinyl, pyrimidinyl, pyridazinyl, thienyl, furyl, furazanyl, pyrrolyl, imidazolyl, thiazolyl, oxazolyl, pyrazolyl, isothiazolyl, isoxazolyl, 1,2,3-triazolyl, tetrazolyl, 1,2,3-thiadiazolyl, 1,2,3-oxadiazolyl, 1,2,4-triazolyl, 1,2,4-thiadiazolyl, 1,2,4-oxadiazolyl, 1,3,4-triazolyl, 1,3,4-thiadiazolyl, and 1,3,4 oxadiazolyl.


Additionally, heterocyclyl encompasses polycyclic heterocyclyls (including both aromatic or non-aromatic), for example, indolyl, indolinyl, isoindolinyl, quinolinyl, tetrahydroquinolinyl, isoquinolinyl, tetrahydroisoquinolinyl, 1,4-benzodioxanyl, coumarinyl, dihydrocoumarinyl, benzofuranyl, 2,3-dihydrobenzofuranyl, isobenzofuranyl, chromenyl, chromanyl, isochromanyl, xanthenyl, phenoxathiinyl, thianthrenyl, indolizinyl, isoindolyl, indazolyl, purinyl, phthalazinyl, naphthyridinyl, quinoxalinyl, quinazolinyl, cinnolinyl, pteridinyl, phenanthridinyl, perimidinyl, phenanthrolinyl, phenazinyl, phenothiazinyl, phenoxazinyl, 1,2-benzisoxazolyl, benzothiophenyl, benzoxazolyl, benzthiazolyl, benzimidazolyl, benztriazolyl, thioxanthinyl, carbazolyl, carbolinyl, acridinyl, pyrolizidinyl, and quinolizidinyl.


In addition to the polycyclic heterocyclyls described above, heterocyclyl includes polycyclic heterocyclyls wherein the ring fusion between two or more rings includes more than one bond common to both rings and more than two atoms common to both rings. Examples of such bridged heterocycles include quinuclidinyl, diazabicyclo[2.2.1]heptyl; and 7-oxabicyclo[2.2.1]heptyl.


Metal ions that can be used in the synthesis of frameworks of the disclosure include Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, W3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si4+, Si2+, Ge4+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+, and combinations thereof, along with corresponding metal salt counter-anions.


Metal ions can be introduced into open frameworks, MOFs, ZIFs and COFs, via complexation with the functionalized organic linkers (e.g., imine or N-heterocyclic carbene) in framework backbones or by simple ion exchange. Therefore, any metal ions from the periodic table can be introduced.


The preparation of the frameworks of the disclosure can be carried out in either an aqueous or non-aqueous system. The solvent may be polar or non-polar as the case may be. The solvent can comprise the templating agent or the optional ligand containing a monodentate functional group. Examples of non-aqueous solvents include n-alkanes, such as pentane, hexane, benzene, toluene, xylene, chlorobenzene, nitrobenzene, cyanobenzene, aniline, naphthalene, naphthas, n-alcohols such as methanol, ethanol, n-propanol, isopropanol, acetone, 1,3,-dichloroethane, methylene chloride, chloroform, carbon tetrachloride, tetrahydrofuran, dimethylformamide, dimethylsulfoxide, N-methylpyrollidone, dimethylacetamide, diethylformamide, thiophene, pyridine, ethanolamine, triethylamine, ethlenediamine, and the like. Those skilled in the art will be readily able to determine an appropriate solvent based on the starting reactants and the choice of solvent is not believed to be crucial in obtaining the materials of the disclosure.


Templating agents can be used in the methods of the disclosure. Templating agents employed in the disclosure are added to the reaction mixture for the purpose of occupying the pores in the resulting crystalline base frameworks. In some variations of the disclosure, space-filling agents, adsorbed chemical species and guest species increase the surface area of the metal-organic framework. Suitable space-filling agents include, for example, a component selected from the group consisting of: (i) alkyl amines and their corresponding alkyl ammonium salts, containing linear, branched, or cyclic aliphatic groups, having from 1 to 20 carbon atoms; (ii) aryl amines and their corresponding aryl ammonium salts having from 1 to 5 phenyl rings; (iii) alkyl phosphonium salts, containing linear, branched, or cyclic aliphatic groups, having from 1 to 20 carbon atoms; (iv) aryl phosphonium salts, having from 1 to 5 phenyl rings; (v) alkyl organic acids and their corresponding salts, containing linear, branched, or cyclic aliphatic groups, having from 1 to 20 carbon atoms; (vi) aryl organic acids and their corresponding salts, having from 1 to 5 phenyl rings; (vii) aliphatic alcohols, containing linear, branched, or cyclic aliphatic groups, having from 1 to 20 carbon atoms; or (viii) aryl alcohols having from 1 to 5 phenyl rings.


Crystallization can be carried out by leaving the solution at room temperature or in isothermal oven for up to 300° C.; adding a diluted base to the solution to initiate the crystallization; diffusing a diluted base into the solution to initiate the crystallization; and/or transferring the solution to a closed vessel and heating to a predetermined temperature.


Also provided are devices for the sorptive uptake of a chemical species. The device includes a sorbent comprising a framework provided herein or obtained by the methods of the disclosure. The uptake can be reversible or non-reversible. In some aspects, the sorbent is included in discrete sorptive particles. The sorptive particles may be embedded into or fixed to a solid liquid- and/or gas-permeable three-dimensional support. In some aspects, the sorptive particles have pores for the reversible uptake or storage of liquids or gases and wherein the sorptive particles can reversibly adsorb or absorb the liquid or gas.


In some embodiments, a device provided herein comprises a storage unit for the storage of chemical species such as ammonia, carbon dioxide, carbon monoxide, hydrogen, amines, methane, oxygen, argon, nitrogen, argon, organic dyes, polycyclic organic molecules, and combinations thereof.


Also provided are methods for the sorptive uptake of a chemical species. The method includes contacting the chemical species with a sorbent that comprises a framework provided herein. The uptake of the chemical species may include storage of the chemical species. In some aspects, the chemical species is stored under conditions suitable for use as an energy source.


Also provided are methods for the sorptive uptake of a chemical species which includes contacting the chemical species with a device provided described herein.


Natural gas is an important fuel gas and it is used extensively as a basic raw material in the petrochemical and other chemical process industries. The composition of natural gas varies widely from field to field. Many natural gas reservoirs contain relatively low percentages of hydrocarbons (less than 40%, for example) and high percentages of acid gases, principally carbon dioxide, but also hydrogen sulfide, carbonyl sulfide, carbon disulfide and various mercaptans. Removal of acid gases from natural gas produced in remote locations is desirable to provide conditioned or sweet, dry natural gas either for delivery to a pipeline, natural gas liquids recovery, helium recovery, conversion to liquefied natural gas (LNG), or for subsequent nitrogen rejection. CO2 is corrosive in the presence of water, and it can form dry ice, hydrates and can cause freeze-up problems in pipelines and in cryogenic equipment often used in processing natural gas. Also, by not contributing to the heating value, CO2 merely adds to the cost of gas transmission.


An important aspect of any natural gas treating process is economics. Natural gas is typically treated in high volumes, making even slight differences in capital and operating costs of the treating unit significant factors in the selection of process technology. Some natural gas resources are now uneconomical to produce because of processing costs. There is a continuing need for improved natural gas treating processes that have high reliability and represent simplicity of operation.


In addition, removal of carbon dioxide from the flue exhaust of power plants, currently a major source of anthropogenic carbon dioxide, is commonly accomplished by chilling and pressurizing the exhaust or by passing the fumes through a fluidized bed of aqueous amine solution, both of which are costly and inefficient. Other methods based on chemisorption of carbon dioxide on oxide surfaces or adsorption within porous silicates, carbon, and membranes have been pursued as means for carbon dioxide uptake. However, in order for an effective adsorption medium to have long term viability in carbon dioxide removal it should combine two features: (i) a periodic structure for which carbon dioxide uptake and release is fully reversible, and (ii) a flexibility with which chemical functionalization and molecular level fine-tuning can be achieved for optimized uptake capacities.


A number of processes for the recovery or removal of carbon dioxide from gas steams have been proposed and practiced on a commercial scale. The processes vary widely, but generally involve some form of solvent absorption, adsorption on a porous adsorbent, distillation, or diffusion through a semipermeable membrane.


The following examples are intended to illustrate but not limit the disclosure. While they are typical of those that might be used, other procedures known to those skilled in the art may alternatively be used.


EXAMPLES
Example 1
Post-Synthesis Metalation

All reagents unless otherwise stated were obtained from commercial sources (Alfa Aesar, Cambridge isotope laboratories, Sigma Aldrich) and were used without further purification and all manipulations were carried out in an Ar atmosphere. Yields reported were unoptimized. Elemental microanalyses were performed at the University of California, Los Angeles, Department of Chemistry and Biochemistry.


Synthesis of (Zn4O)3(BDC—C6H5N2)3(BTB)4 and (Zn4O)3(BDC—C6H5N2PdCl2)3(BTB)4.


Synthetic procedure for (Zn4O)3(BDC—C6H5N2)3(BTB)4. 200 mg (Zn4O)3(BDC—NH2)3(BTB)4 was placed in a 20 ml glass vial and immersed in 10 ml of anhydrous toluene. 0.3 ml of 2-pyridinecarboxaldehyde was added to the vial and allowed to stand unperturbed for 5 days. The resultant yellow crystals were washed with CH2Cl2 and dried under vacuum to yield of (Zn4O)3(BDC—C6H5N2)3(BTB)4 (0.190 g, 87%).


Synthetic procedure for (Zn4O)3(BDC—C6H5N2PdCl2)3(BTB)4. 100 mg of (Zn4O)3(BDC—C6H5N2)3(BTB)4 was placed in a 20 ml vial immersed in 10 ml of anhydrous CH2Cl2. 0.20 g of PdCl2(CH3CN)2 was added causing the yellow crystals to turn dark purple. The reaction mixture was allowed to stand unperturbed for 12 hours after which the dark purple crystals were washed with CH2Cl2 and dried to yield (Zn4O)3(BDCC6H5N2PdCl2)3(BTB)4 (0.098 g, 85%).


Synthetic procedure for model compound: Dichloro(N-(2-pyridylmethylene)aniline-N,N′)Palladium(II). 2.0 g of (E)-N-((Pyridin-2-yl)methylene)benzenamine was reacted with PdCl2(CH3CN)2 in acetone for 2 hrs. The resulting orange powder, dichloro(N-(2-pyridylmethylene)aniline-N,N′)Palladium(II) (1.45 g), was filtered dried in air and used without further purification.


XAS Data collection. XAS measurements were conducted at the Stanford Synchrotron Radiation Laboratory (SSRL) with the SPEAR storage ring containing between 80 and 100 mA at 3.0 GeV. Pd Kedge data were collected on the structural molecular biology XAS beamline 7-3 operating with a wiggler field of 2 T. A Si(220) double-crystal monochromator was used. Beamline 7-3 is equipped with a rhodium-coated vertical collimating mirror upstream of the monochromator, and a downstream bent-cylindrical focusing mirror (also rhodium-coated). Harmonic rejection was accomplished by detuning the intensity of the incident radiation at the end of the scan by 50%. Incident and transmitted X-ray intensities were monitored using argon or nitrogen-filled ionization chambers. X-ray absorption was measured in transmittance mode. During data collection, samples were maintained at a temperature of approximately 10K using an Oxford instruments liquid helium flow cryostat. For each sample, three scans were accumulated, and the energy was calibrated by reference to the absorption of a Pd foil measured simultaneously with each scan, assuming a lowest energy inflection point of 24349.0 eV. The energy threshold of the extended X-ray absorption fine structure (EXAFS) oscillations was assumed to be 24370 eV.


XAS data analysis. The EXAFS oscillations χ(k) were quantitatively analyzed by curve-fitting using the EXAFSPAK suite of computer programs using ab-initio theoretical phase and amplitude functions calculated using the program FEFF version 8.25. No smoothing, filtering or related operations were performed on the data.









TABLE 1







EXAFS curve-fitting parametersa.



















N
R
σ3
N
R
σ3
N
R
σ3















Pd—Cl
Pd—N
Pd—C
ΔEtext missing or illegible when filed
F






















MOFYY
2
2.276(2)
0.0052(1)
2
1.993(2)
0.0013(1)
2
2.793(4)
0.0040(7)
−17.4(9)
0.273






aCoordination numbers, N, interatomic distances R (Å), Debye-Waller factors σ2 (Å2), and threshold energy shifts ΔE0 (eV). Values in parentheses are the estimated standard deviations (precisions) obtained from the diagonal elements of the covariance matrix. The accuracies will be much greater than these values, and numbers and Debye-Waller factors. The fit-error function F is defined as F = {square root over (Σk6text missing or illegible when filed  − χexpt)/Σχexptz)}, where the summations are over all data points included in the refinement.




text missing or illegible when filed indicates data missing or illegible when filed







XANES measurements. FIG. 4 compares the Near edge regions of Pd Model compound, PdCl2(CH3CN)2 and (Zn4O)3(BDC—C6H5N2PdCl2)3(BTB)4. This stacked plot highlights the similarities between the model complex and (Zn4O)3(BDC—C6H5N2PdCl2)3(BTB)4 indicating that the palladium, in both cases, is in a very similar chemical and electronic environment.


Powder X-Ray diffraction. Powder X-ray data were collected using a Bruker D8-Discover θ-2θ diffractometer in reflectance Bragg-Brentano geometry employing Ni filtered Cu Kα line focused radiation at 1600 W (40 kV, 40 mA) power and equipped with a Vantec Line detector. Radiation was focused using parallel focusing Gobel mirrors. The system was also outfitted with an antiscattering shield that prevents incident diffuse radiation from hitting the detector, preventing the normally large background at 2θ<3. Samples were mounted on zero background sample holders by dropping powders from a wide-blade spatula and then leveling the sample with a razor blade. Samples were prepared by dissolving small amounts of the material in methanol followed by sonication for 10 min. The precipitate was then filtered before collecting data.


Mass spectrometry. Samples of (Zn4O)3(BDC—C6H5N2)3(BTB)4 were dissolved in MeOH and ESI-MS was run in the negative ion mode. (see, e.g., FIG. 5).


Gas adsorption measurements. Low pressure Ar adsorption isotherms were measured volumetrically on an Autosorb-1 analyzer (Quantachrome Instruments). A liquid argon bath (87 K) was used for the measurements. The Ar and He gases used were UHP grade. From the Ar adsorption isotherms, the BET surface areas (accessible surface area) and total pore volumes of each material have been calculated (Table 2). The pore volume of each material was estimated from the Dubinin-Radushkevich (DR) model with the assumption that the adsorbate is in the liquid state and the adsorption involves a pore-filling process. To estimate pore size distributions for MOFs, Ar isotherms were analyzed using nonlocal density functional theory (NLDFT) implementing a hybrid kernel for Ar adsorption at 87 K based on a zeolite/silica model containing cylindrical pores.









TABLE 2







Summary of Porosity Measurements for MOFs.













BET surface
Pore volume/
Pore size



Compound
area/m2 g−1
cm3 g−1
distributions/Å







A
3200
1.74
13.6, 30.7



B
3200
1.74
13.6, 30.7



C
1700
0.89
13.0, 29.6










For porosity measurements, as-synthesized (Zn4O)3(BDC—C6H5N2)3 (BTB)4 was immersed in acetone for 24 h, during which the activation solvent was replenished three times. The sample was evacuated with supercritical CO2 in a Tousimis Samdri PVT-3D critical point dryer. Briefly, the acetone-containing sample was placed in the chamber and acetone was exchanged with liquid CO2. After that the chamber containing the sample and liquid CO2 was heated up around 40° C. and kept under the supercritical condition (typically 1300 psi) for 1 h. The CO2 was slowly vented (ca. 1 h) from the chamber at around 40° C., yielding porous material.


Iminopyridine moieties have proved to be a versatile ligand system for binding a variety of transition metals in known coordination environments. The disclosure demonstrates incorporation of such a moiety into A through condensation of the amine-functionalized framework and 2-pyridinecarboxaldehyde (Scheme 1). The isoreticular functionalized MOF B was synthesized by adding 1.5 equiv of 2-pyridinecarboxaldehyde to A in anhydrous toluene and allowing the reaction to proceed for 5 days, during which the needleshaped crystals changed color from clear to yellow to give a product having a composition that coincided well with the expected formula, thus indicating quantitative conversion. Powder X-ray diffraction (PXRD) studies (FIG. 1) showed that B maintained crystallinity and possessed the same underlying topology as A subsequent to the covalent transformation. The presence of the iminopyridine unit was confirmed by mass spectrometry of digested samples of B, which showed a parent ion peak at m/z 269 ([M-H]-) attributable to the ligand fragment.


Isoreticular metalation was achieved by adding 1.5 equiv of PdCl2(CH3CN)2 to B in anhydrous CH2Cl2, whereupon the yellow crystalline material became dark-purple within several minutes. After 12 h, the material was washed three times with 10 mL portions of CH2Cl2; the crystals were then immersed in dry CH2Cl2, and the solvent was refreshed every 24 h for 3 days to yield C. Again, the PXRD pattern of C (FIG. 1) confirmed that it retained crystallinity and possessed a framework topology identical to those of A and B. Removal of guest species from the pores was achieved by evacuating the crystals at 80° C. for 12 h. Elemental analysis performed on the guest-free framework of C gave a molecular formula C50H28N2O13Zn4PdCl2, whose Pd/Zn ratio of 1:4 is consistent with quantitative metalation of the iminopyridine sites.


The porosities of B and C were assessed by performing an 87 K Ar isotherm (FIG. 2). Notably, both materials maintained porosity after two subsequent chemical transformations. Additionally, analogous profiles were observed for A-C; however, the small hysteresis present in the isotherm of C implies the presence of defects, presumably resulting from the sequence of chemical reactions carried out on the crystals.


To confirm that the Pd is complexed to the iminopyridine unit and to precisely determine the Pd coordination environment within the framework, Pd K-edge extended X-ray absorption fine structure (EXAFS) spectroscopy was performed on samples of C. FIG. 3 shows the EXAFS Fourier transform of C together with the results of the curve-fitting analysis. The data analysis indicated the presence of two Pd—Cl and two 2 Pd—N ligands at 2.276(2) and 1.993(2) Å, respectively. A survey of the Cambridge Structural Database showed that both of these distances are consistent with crystallographic data for analogous Pd compounds. Additionally, two Pd—C interactions at 2.793(4) Å, belonging to the ligand backbone, were required for the best data fit. The EXAFS data analysis provides a quantitative structural description of the Pd coordination environment within the MOF and clearly demonstrates that Pd is bound to the framework via the iminopyridine moiety. Furthermore, analysis of the X-ray absorption near-edge structure (XANES) spectrum indicated that the major chemical form of Pd within the framework of C was consistent with an iminopyridine-bound moiety and not the starting material, PdCl2(CH3CN)2.


Example 2
Pre-Synthesis Metalation

Synthesis and Analytical Data for the Linkers (L0-L2) and IRMOF-76, 77. Chemicals were purchased from commercial suppliers and used as received unless otherwise noted. Dry solvents were obtained from an EMD Chemicals DrySolv® system. Thin-layer chromatography (TLC) was carried out using glass plates precoated with silica gel 60 with fluorescent indicator (Whatman LK6F). The plates were inspected by UV light (254 nm) and iodine/silica gel. Column chromatography was carried out using silica gel 60F (230-400 mesh). 1H, 13C and 19F solution NMR spectra were recorded on Bruker ARX400 (400 MHz) or AV600 (600 MHz) spectrometers. The residual solvents are used as the internal standard for 1H and 13C NMR. Trifluoroacetic acid (δ=−76.5 ppm) is used as the external standard for 19F NMR. The chemical shifts were listed in ppm on the 6 scale and coupling constants were recorded in hertz (Hz). The following abbreviations were used to denote the multiplicities: s, singlet; d, doublet; t, triplet; q, quartet; b, broad peaks; m, multiplet or overlapping peaks.



13C CP/MAS solid state NMR spectra were collected on a Bruker DSX-300 spectrometer using a standard Bruker magic angle spinning (MAS) probe with 4 mm (outside diameter) zirconia rotors. Cross-polarization with MAS (CP/MAS) was used to acquire at 75.47 MHz (13C). The 1H and 13C ninety-degree pulse widths were both 4 ps. The CP contact time was 1.5 ms. High power two-pulse phase modulation (TPPM) 1H decoupling was applied during data acquisition. The decoupling frequency corresponded to 72 kHz. The MAS sample spinning rate was 10 kHz. Recycle delays betweens scans varied between 10 and 30 s, depending upon the compound as determined by observing no apparent loss in the signal intensity from one scan to the next. The 13C chemical shifts are given relative to tetramethylsilane as zero ppm calibrated using the methyne carbon signal of adamantane assigned to 29.46 ppm as a secondary reference.


FT-IR spectra were collected on a Shimazu FT-IR Spectrometer. Electrospray ionization mass spectra (ESI-MS), matrix-assisted laser desorption ionization mass spectra (MALDI-MS) and chemical ionization mass spectra with gas chromatography (CI/GC-MS) were conducted at Molecular Instrumentation Center in of the University of California, Los Angeles.


Elemental microanalyses were performed on a Thermo Flash EA1112 combustion CHNS analyzer. Inductively coupled plasma (ICP) anaylses for IRMOF-76 and 77 were performed by Intertek QTI.




embedded image


S1: Starting material (1) was prepared following the reported procedure.1 Reduction of 1 was performed following the published procedures1, 2 with slight modification in the work-up process. To a 2000 mL flask were added 1 (20.5 g, 70 mmol), CoCl2 (91 mg, 0.7 mmol), THF (200 mL) and EtOH (450 mL). The mixture was refluxed. NaBH4 (2.65 g, 70 mmol for each portion) was added three times (total 8.0 g) every hour. After consumption of 1 was confirmed by TLC analysis, the mixture was cooled to room temperature. After addition of water (300 mL) and vigorous stirring for 10 min, gummy precipitate was filtered off using Celite. Organic solvent was evaporated and product was extracted with dichloromethane three times. Combined organic layer was washed with water and brine and dried over Na2SO4. The extract was filtered off, evaporated, and the crude mixture was purified with short pad silica gel chromatography (eluent: hexane/acetone=5/1). Combined solution was evaporated to give diamine as an orange solid.


Obtained diamine was immediately used for the next step. To the diamine dissolved in MeOH (350 mL) were added HC(OEt)3 (13.9 mL, 84 mmol) and sulfamic acid (340 mg, 3.5 mmol). The mixture was stirred overnight and powder precipitate formed. Solvent was evaporated and the residue was rinsed with ether. Drying under air gave S1 as a yellow powder (10.1 g, 52% yield for 2 steps).



1H NMR (400 MHz, DMSO-d6): δ=7.35 (s, 2H), 8.36 (s, 1H), 13.2 (brs, 1H); 13C NMR (100 MHz, DMSO-d6): δ=113.75, 126.21, 132.75, 144.05; IR (KBr, cm−1) ν=630, 792, 912, 956, 1163, 1217, 1259, 1284, 1340, 1381, 1433, 1489, 1616, 2823, 3062; CI/GC-MS [M]+ C7H4Br2N2+ m/z=276; Elemental analysis: C7H4Br2N2 Calcd. C, 30.47; H, 1.46; N, 10.15%, Found: C, 30.21; H, 1.64; N, 10.94%.




embedded image


2: To a 1000 mL flask were added S1 (19.7 g, 71.4 mmol), K2CO3 (29.6 g, 214 mmol) and EtOH (500 mL). The mixture was heated at reflux. To the hot mixture, MeI (8.8 mL, 142.8 mmol) was added dropwise and the mixture was maintained at reflux for 1 h. After consumption of S2 was confirmed by TLC analysis, the mixture was cooled to room temperature. After addition of water (200 mL) and evaporation of EtOH, the powdered precipitate was collected, washed with water and hexane/Et2O (1/1), and dried to give 2 as a brown powder (21.0 g, 100% yield).



1H NMR (400 MHz, DMSO-d6): δ=4.05 (s, 3H), 7.34 (s, 2H), 8.32 (s, 1H); 13C NMR (100 MHz, DMSO-d6): δ=34.51, 102.75, 112.82, 126.14, 128.05, 132.44, 143.80, 147.96; IR (KBr, cm−1) ν=524, 623, 719, 781, 918, 1058, 1105, 1186, 1219, 1273, 1301, 1332, 1390, 1465, 1500, 1604, 1816, 2940, 3086; CI/GC-MS [M]+ C8H6Br2N2+ m/z=290; Elemental analysis: C8H6Br2N2 Calcd. C, 33.14; H, 2.09; N, 9.66%, Found C, 31.92; H, 2.13; N, 9.50%.




embedded image


S2: To a 1000 mL flask were added 4-methoxyphenylboronic acid (20.5 g, 113 mmol), pinacol (14.0 g, 118 mmol) and THF (500 mL). The mixture was heated to reflux, stirred for 2 h, and then cooled to room temperature. The solution is filtered over short pad basic aluminum oxide and the solvent was evaporated to give S2 as a white powder (26.0 g, 85% yield).



1H NMR (400 MHz, CDCl3): δ=1.34 (s, 12H), 3.83 (s, 3H), 7.86 (d, J=6.7 Hz, 2H), 8.01 (d, J=6.7 Hz, 2H). 13C NMR (100 MHz, CDCl3): δ=24.88, 52.13, 84.16, 128.59, 132.32, 134.66, 167.12; IR (KBr, cm−1) ν=486, 520, 576, 651, 709, 771, 806, 856, 1018, 1109, 1140, 1278, 1373, 1508, 1562, 1614, 1724 (s), 1950, 2985 (s); CI/GC-MS [M]+ C14H19BO4+ m/z=262; Elemental analysis: C14H19BO4 Calcd. C, 64.15; H, 7.31%, Found C, 64.81; H, 7.30%.




embedded image


3: Transesterification was conducted following published procedure.3 To the stirred solution of S2 (13.2 g, 50 mmol) in 500 mL of anhydrous diethyl ether was added t-BuOK (28.0 g, 250 mmol) portionwise over 30 min under nitrogen atmosphere. Stirring was continued for 2 h. The suspension was poured into water (1000 mL). After the organic layer was separated, the compound was extracted with ethyl acetate three times. The combined organic layer was dried over Na2SO4, filtered off, and evaporated to give 3 as a white powder (12.2 g, 80% yield). 3 was used for next step without further purification.



1H NMR (400 MHz, CDCl3): δ=1.35 (s, 12H), 1.63 (s, 9H), 7.85 (d, J=6.7 Hz, 2H), 7.96 (d, J=6.7 Hz, 2H); 13C NMR (100 MHz, CDCl3): δ=24.87, 28.19, 81.08, 84.09, 128.42, 134.25, 134.52, 165.80; IR (KBr, cm−1) ν=522, 578, 651, 709, 777, 815, 854, 960, 1016, 1116, 1141, 1170, 1296, 1359, 1508, 1560, 1612, 1705 (s), 1957, 1981 (s); CI/GC-MS [M-(CH2═C(CH3)2)]+ C13H18BO4+ m/z=249. Elemental analysis: C17H25BO4 Calcd. C, 67.12; H, 8.28%, Found C, 67.60; H, 8.23%.




embedded image


4: The stirred solution of 2 (1.93 g, 6.67 mmol), 3 (4.67 g, 15.35 mmol), Pd(PPh3)4 (385 mg, 0.33 mmol) and K2CO3 (2.76 g, 20 mmol) in 50 mL of 1,4-dioxane and 12 mL of water was heated to 100° C. under nitrogen atmosphere. Stirring was continued overnight, and then the mixture was cooled to room temperature. Water was added and organic compounds were extracted with ethyl acetate three times. The combined organic layer was washed with brine and dried over Na2SO4. The extract was filtered through short pad basic aluminum oxide and evaporated. The obtained residue was rinsed with hexane/Et2O (2/1) to give 4 as a brown powder (2.0 g, 62% yield).



1H NMR (400 MHz, CDCl3) : δ=1.62 (s, 9H) , 1.64 (s, 9H), 3.42 (s, 3H), 7.23 (d, J=7.6 Hz, 1H), 7.49 (d, J=7.6 Hz, 1H), 7.52 (d, J=8.1 Hz, 2H), 7.87 (s, 1H), 8.05-8.16 (m, 6H); 13C NMR (100 MHz, CDCl3): δ=28.26, 34.50, 80.79, 81.38, 121.52, 125.04, 125.99, 129.10, 129.59, 129.80, 130.79, 131.51, 131.68, 132.38, 142.32, 142.40, 145.54, 165.45, 165.87; IR (KBr, cm−1) ν=509, 592, 630, 661, 704, 731, 769, 825, 848, 867, 1018, 1118, 1168, 1294, 1369, 1471, 1500, 1608, 1708 (s), 2978 (s); CI/GC-MS [M-CH2═C(CH3)2]+ C26H25N2O4+ m/z=429.; Elemental analysis: C30H32N2O4 Calcd. C, 74.36; H, 6.66; N, 5.78%, Found: C, 73.05; H, 6.50; N, 6.06%.




embedded image


5: A solution of 4 (570 mg, 1.17 mmol) and MeI (0.73 mL, 11.7 mmol) in 12 mL of acetonitrile was heated to reflux and stirred overnight. After cooling the mixture to room temperature, volatiles were evaporated. The obtained residue was rinsed with hexane/ethyl acetate (2/1) to give 5 as a brown powder (689 mg, 94% yield).



1H NMR (400 MHz, CDCl3): δ=1.61 (s, 18H), 3.87 (s, 6H), 7.41 (s, 2H), 7.53 (d, J=6.6 Hz, 4H), 8.10 (d, J=6.6 Hz, 4H), 10.64 (s, 1H); 13C NMR (100 MHz, CDCl3): δ=28.17, 37.56, 81.79, 128.44, 128.88, 129.59, 129.77, 129.88, 132.87, 139.20. 145.38, 164.91; IR (KBr, cm−1) ν=621, 709, 773, 846, 1012, 1118, 1165, 1296, 1369, 1456, 1608, 1710 (s), 2976, 3435 (br); ESI-TOF-MS [M-I]+ C31H35N2O4+ m/z=499. Elemental analysis: C31H35IN2O4 Calcd. C, 59.43; H, 5.63; N, 4.47%, Found: C, 56.83; H, 5.70; N, 4.72%.




embedded image


L0: To a solution of 5 (2.1 g, 3.35 mmol) in dichloromethane (35 mL) was added HBF4.OEt2 (2.26 mL, 16.5 mmol). The mixture was stirred for 2 h at room temperature. After dilution with diethyl ether the precipitates were filtered and washed with thoroughly with dichloromethane and diethyl ether. Toluene was added to the powder and evaporated. This is repeated twice to remove residual water as an azeotropic mixture. After drying in vacuo at 50° C., L0 was obtained as gray powder (1.7 g, 100% yield).



1H NMR (400 MHz, DMSO-d6): δ=3.50 (s, 6H), 7.54 (s, 2H), 7.72 (d, J=9.2 Hz, 4H), 8.03 (d, J=9.2 Hz, 4H), 9.63 (s, 1H), 13.2 (brs, 2H); 13C NMR (100 MHz, DMSO-d6): δ=37.94, 128.58, 128.72, 129.72, 130.07, 130.70, 131.10, 140.12, 145.82, 163.18; 19F NMR (376.5 MHz, DMSO-d6): δ=−148.9 (s, BF4); MALDI-MS: [M-BF4] C23H19N2O4+ m/z=387.




embedded image


S3: A solution of 5 (1.87 g, 3 mmol), Pd(CH3CN)2Cl2 (900 mg, 3.3 mmol), NaI (750 mg, 6 mmol), and K2CO3 (2.07 g, 15 mmol) in 30 mL of pyridine was heated to reflux and stirred overnight. After cooling the mixture to room temperature, all volatiles were evaporated. The obtained residue was dissolved in chloroform (200 mL) and water (100 mL). The separated organic layer was washed with 5% CuSO4 aq. (30 mL, twice) and brine (30 mL), and then dried over Na2SO4. The extract was filtered over short pad silica gel and washed thoroughly with hexane/acetone (2/1). The combined organic solutions were evaporated to give S3 as an orange powder (2.5 g, 88% yield).



1H NMR (400 MHz, CDCl3): δ=1.64 (s, 18H), 3.79 (s, 6H), 7.09 (s, 2H), 7.25-7.34 (m, 2H), 7.51 (d, J=8.2 Hz, 4H), 7.70-7.77 (m, 1H), 8.11 (d, J=8.2 Hz, 4H), 8.97-9.01 (m, 2H) 13C NMR (100 MHz, CDCl3): δ=28.24, 40.04, 81.53, 124.60, 125.01, 125.80, 129.27, 129.93, 132.06, 132.87, 141.45, 153.85 (NHC carbon), 165.29; IR (KBr, cm−1) ν=675, 692, 769, 848, 1012, 1116, 1165, 1294, 1388, 1446, 1604, 1710 (s), 2974, 3445; Elemental analysis: C36H39I2N3O4Pd l Calcd. C, 46.10; H, 4.19; N, 4.48%, Found: C, 43.64; H, 4.02; N, 4.79%.




embedded image


L1: To a solution of S3 (2.5 g, 2.64 mmol) in dichloromethane (15 mL) was added Me3SiOTf (1.67 mL, 9.24 mmol). The mixture was stirred for 2 h at room temperature. After addition of water the brown precipitates were filtered and washed thoroughly with water and dichloromethane. To the brown powder (S4) in CHCl3/MeOH (1/1, 25 mL) was added pyridine (1 mL, 13.2 mmol). The mixture was stirred for 30 min at room temperature. Volatiles were evaporated and the residue was suspended in dichloromethane. To the suspension was added 5% CuSO4 aq. The mixture was stirred for 10 min and the orange powder was filtered and washed with water. Toluene was added to the orange powder and evaporated. This is repeated twice to remove residual water as an azeotropic mixture. After drying in vacuo, L1 was obtained as an orange powder (1.62 g, 74% yield).



1H NMR (400 MHz, DMSO-d6): δ=3.68 (s, 6H), 7.21 (s, 2H), 7.48-7.52 (m, 2H), 7.63 (d, J=7.6 Hz, 4H), 7.87-7.93 (m, 1H), 8.03 (d, J=7.6 Hz, 4H), 8.83-8.86 (m, 2H), 13.1 (brs, 2H) ; 13C NMR (150 MHz, 80° C., DMSO-d6): δ=125.54, 125.72, 126.05, 130.00, 130.61, 132.67, 138.50, 141.55, 153.13 (NHC carbon), 166.57, methyl carbon peak substituted on nitrogen (˜40 ppm) was overlapped by residual peak of DMSO; 13C CP/MAS solid state NMR (75 M Hz): δ=42.15, 125.00, 129.27, 142.18, 153.28 (NHC carbon), 172.74; IR (KBr, cm−1) ν=549, 594, 673, 692, 769, 825, 862, 920, 1012, 1078, 1109, 1176, 1290, 1386, 1444, 1606, 1685 (s), 2546, 2663, 3448; ESI-TOF-MS (anion mode) [M-pyridine-H] C23H17I2N2O4Pd m/z=744 and isotopic patterns were well-matched to simulated ones.; Elemental analysis: C28H23I2N3O4Pd Calcd. C, 40.73; H, 2.81; N, 5.09%, Found: C, 40.22; H, 2.91; N, 5.20%.




embedded image


L2: To a suspension of L1 (˜80 mg) in 5 mL chloroform was added quinoline (0.2 mL). The mixture was stirred for 1 h at room temperature. Volatiles were evaporated and the residue was suspended in chloroform and filtered off to collect L2 as an orange powder, which was used as a reference compound for digestion studies.




embedded image


IRMOF-76: A solid mixture of L0 (47 mg, 0.1 mmol), Zn(BF4)2 hydrate (72 mg, 0.3 mmol), KPF6 (186 mg, 1 mmol) was dissolved in N,N-dimethylformamide (DMF, 15 mL) in a capped vial. The reaction was heated to 100° C. for 24-48 h yielding block crystals on the wall of the vial. The vial was then removed from the oven and allowed to cool to room temperature naturally. After opening and removal of mother liquor from the mixture, colorless crystals were collected and rinsed with DMF (3×4 mL). Powder and single X-ray diffractions for this material were measured immediately. The sample dried in vacuo after solvent exchange with chloroform was used for CP/MAS NMR and IR measurements.


Analytical data for IRMOF-76: 19F NMR of digested IRMOF-76 in DCl/DMSO-d6 (1/20). Presence of BF4 (−149.2 ppm, s) and PF6 (−71.1 ppm, d, JPF=707 Hz) was confirmed.

  • IR (KBr, cm−1) ν=557, 715, 783, 843, 1012, 1406, 1544, 1608 (s), 3421
  • 13C CP/MAS solid state NMR (75 MHz) 36.10 (methyl), 129.06*, 138.69*, 143.60 (C2 of benzimidazole), 174.11 (CO2Zn).*broadened overlapped peaks in aromatic regions.


ICP analysis. Measured elemental ratio: C69H54.5B0.53P1.89F10.9N6.1Zn4.3. Estimated formula: Zn4O(C23H17N2O5)3(BF4)0.5(PF6)1.6(OH)0.9═C69H51.9B0.5P1.6F11.6N6O17.9Zn4


Neither potassium (K) nor iodine (I) were detected in more than trace amount.


Following examined postsynthetic generations of NHC from IRMOF-76 were not successful:

  • Treatment with Brönsted base (Potasssium/sodium/lithium tert-butoxide, DBU, Et3N)
  • Treatment with Ag2O or Ag2CO3
  • Formation of CN/CCl3/alkoxide adduct for thermal α-elimination




embedded image


IRMOF-77: A solid mixture of L1 (16.6 mg, 0.02 mmol) and Zn(NO3)2.6H2O (18 mg, 0.06 mmol) was dissolved in N,N-diethylformamide (DEF, 1.5 mL) and pyridine (0.02 mL) in a capped vial. The reaction was heated to 100° C. for 24-36 h yielding block crystals on the bottom of the vial. The vial was then removed from the oven and allowed to cool to room temperature naturally. After opening and removal of mother liquor from the mixture, light orange crystals were collected and rinsed with DEF (3×4 mL). Powder and single X-ray diffractions for this material were measured immediately.


Any impurities were separated using the difference in the crystal densities. After decanting the mother liquor, DMF and CHBr3 (1:2 ratio) were added to crystals. Floating orange crystals were collected and used.


Activation of IRMOF-77: IRMOF-77 was activated on a Tousimis Samdri PVT-3D critical point dryer. Prior to drying, the solvated MOF samples were soaked in dry acetone, replacing the soaking solution for three days, during which the activation solvent was decanted and freshly replenished three times. Acetone-exchanged samples were placed in the chamber and acetone was completely exchanged with liquid CO2 over a period of 2.5 h. During this time the liquid CO2 was renewed every 30 min. After the final exchange the chamber was heated up around 40° C., which brought the chamber pressure to around 1300 psi (above the critical point of CO2). The chamber was held under supercritical condition for 2.5 h, and CO2 was slowly vented from the chamber over the course of 1-2 h. The dried samples were placed in a quartz adsorption tube and tested for porosity. Solid state CP/MAS NMR, IR and elemental analysis were also recorded.


Analytical data for IRMOF-77:


Elemental Analysis

Zn4O(C28H21I2N3O4Pd)3(H2O)4 Calcd.: C, 35.77; H, 2.54; I, 26.99; N, 4.47; Pd, 11.32; Zn, 9.28 Found: C, 35.04; H, 2.62; I, 26.92; N, 4.71; Pd, 9.67; Zn, 9.32.


IR (KBr, cm −1)

ν=597, 673, 694, 719, 756, 783, 846, 1012, 1070, 1176, 12215, 1386 (s), 1446, 1541, 1604 (s), 3396



13C CP/MAS solid state NMR (75 MHz)


IRMOF-77: 40.36 (methyl), 125.97*, 130.47*, 140.86 (pyridine), 154.10 (NHC carbon), 175.37 (CO2Zn).


Link L1: 42.15 (methyl), 125.03*, 129.31*, 142.20 (pyridine), 153.29 (NHC carbon), 173.00 (CO2H)


*broadened overlapped peaks in aromatic regions.


Postsynthetic ligand exchange of IRMOF-77: Crystals of IRMOF-77 were immersed in 4% v/v quinoline/DMF solution in a 20-mL vial, capped, and let stand for one day. The quinoline solution was decanted and the crystals were rinsed with DMF (3×4 mL) after which the PXRD pattern was immediately measured. After exchange with chloroform for one day, the solvent was evacuated overnight at room temperature. Solid state CP/MAS NMR spectra were recorded using the dried compound.



13C CP/MAS solid state NMR (75 MHz) for quinoline-exchanged IRMOF-77:


MOF: 39.63 (methyl), 128.81*, 140.19*, 146.19 (quinoline), 152.86 (NHC carbon), 174.38 (CO2Zn).


Link L2: 40.14 and 43.43 (non-equivalent methyl), 128.16*, 143.14*, 146.32 (quinoline), 153.59 (NHC carbon), 173.42 (CO2H)


*broadened overlapped peaks in aromatic regions.


Single Crystal X-ray Diffraction Data Collection, Structure Solution and Refinement Procedures for IRMOF-76 and IRMOF-77. Initial scans of each specimen were performed to obtain preliminary unit cell parameters and to assess the mosaicity (breadth of spots between frames) of the crystal to select the required frame width for data collection. In every case frame widths of 0.5° were judged to be appropriate and full hemispheres of data were collected using the Bruker APEX24 software suite to carry out overlapping φ and ω scans at two different detector (2θ) settings (2θ=28, 60°). Following data collection, reflections were sampled from all regions of the Ewald sphere to redetermine unit cell parameters for data integration and to check for rotational twinning using CELL_NOW. Following exhaustive review of the collected frames the resolution of the dataset was judged. Data were integrated using Bruker APEX2 V 2.1 software with a narrow frame algorithm and a 0.400 fractional lower limit of average intensity. Data were subsequently corrected for absorption by the program SADABS. The space group determinations and tests for merohedral twinning were carried out using XPREP.


All structures were solved by direct methods and refined using the SHELXTL 97 software suite. Atoms were located from iterative examination of difference F-maps following least-squares refinements of the earlier models. Final models were refined anisotropically (if the number of data permitted and stable refinement could be reached) until full convergence was achieved. Hydrogen atoms were placed in calculated positions and included as riding atoms with isotropic displacement parameters 1.2-1.5 times Ueq of the attached carbon atoms.


IRMOF-76: A colorless block-shaped crystal (0.60×0.60×0.40 mm) of IRMOF-76 was placed in a 1.0 mm diameter borosilicate capillary containing a small amount of mother liquor to prevent desolvation during data collection. The capillary was flame sealed and mounted on a SMART APEXII three circle diffractometer equipped with a CCD area detector and operated at 1200 W power (40 kV, 30 mA) to generate Cu κα radiation (λ=1.5418 Å) while being cooled to 258(2) K in a liquid N2 cooled stream of nitrogen, and data were collected at this temperature.


Full hemispheres of data were collected using the Bruker APEX2 software suite to carry out overlapping φ and ω scans at two different detector (2θ) settings (2θ=28, 60°). A total of 96360 reflections were collected, of which 1260 were unique and 913 of these were greater than 2σ(I). The range of θ was from 1.78° to 40.06°. Analysis of the data showed negligible decay during collection. The program scale was performed to minimize differences between symmetry-related or repeatedly measured reflections.


The structure was solved in the cubic Fm 3m space group with Z=8. All non-hydrogen atoms except C8, C9, N1 are refined anisotropically. Others are not possible because of crystal grade and stable isotropical refinement was achieved. Atoms in the dimethylimidazolium ring (C8, C9, and N1) are found to be disordered, and they are refined as half occupancy in each component. Hydrogen atoms were placed in calculated positions and included as riding atoms with isotropic displacement parameters 1.2-1.5 times Ueq of the attached C atoms. The structures were examined using the Adsym subroutine of PLATON10 to assure that no additional symmetry could be applied to the models.


Modeling of electron density within the voids of the frameworks did not lead to identification of guest entities in this structure due to the disordered contents of the large pores in the frameworks. Diffuse scattering from the highly disordered solvent in the void space within the crystal and from the capillary used to set to mount the crystal contributes to the background noise and the ‘washing out’ of high angle data. Solvents were not modeled in the crystal structure. Constraints were used for the dimethylimidazolium ring (bond lengths of C7-N1, C8-N1 and C9-N1 were fixed). Considering the poor data, the structure was expected to have elevated reliability factors. Some atoms showed high Uiso due to low quality of the diffraction data. Poor lengths and angles are due to insufficient constraints and the esd's are also high.


The structure has been reported to display the framework of IRMOF-76 as isolated in the crystalline form. The structure is a primitive cubic framework. To prove the correctness of the atomic positions in the framework, the application of the SQUEEZE5 routine of A. Spek has been performed. However atomic co-ordinates for the “non-SQUEEZE” structures are also presented. No absorption correction was performed. Final full matrix least-squares refinement on F2 converged to R1=0.0549 (F>2σ(F)) and wR2=0.2166 (all data) with GOF=0.912 For the structure where the SQUEEZE program has not been employed, final full matrix least-squares refinement on F2 converged to R1=0.1465 (F>2σ(F)) and wR2=0.4378 (all data) with GOF=1.941. For this structure the elevated R-values are commonly encountered in MOF crystallography, for the reasons expressed above, by us and other research groups.


IRMOF-77: A light orange block-shaped crystal (0.30×0.30×0.20 mm) of IRMOF-77 was placed in a 0.4 mm diameter borosilicate capillary containing a small amount of mother liquor to prevent desolvation during data collection. The capillary was flame sealed and mounted on a SMART APEXII three circle diffractometer equipped with a CCD area detector and operated at 1200 W power (40 kV, 30 mA) to generate Cu κα radiation (λ=1.5418 Å) while being cooled to 258(2) K in a liquid N2 cooled stream of nitrogen, and data were collected at this temperature.


Full hemispheres of data were collected using the Bruker APEX2 software suite to carry out overlapping φ and ω scans at two different detector (2θ) settings (2θ=28, 60°). A total of 51319 reflections were collected, of which 3946 were unique and 2238 of these were greater than 2σ(I). The range of e was from 2.06° to 39.74°. Analysis of the data showed negligible decay during collection. The program scale was performed to minimize differences between symmetry-related or repeatedly measured reflections.


The structure was solved by direct method and refined using the SHELXTL 97 software suite. Atoms were located from iterative examination of difference F-maps following least squares refinements of the earlier models. The structure was solved in the trigonal R 3c space group with Z=12. All zinc atoms (Zn1, Zn2), palladium atom (Pd1), iodine atoms (I1, I2) and other non-hydrogen atoms on backbones of the framework (except for C6, C12, C17) are refined anisotropically with hydrogen atoms generated as spheres riding the coordinates of their parent atoms. Others are not possible because of crystal grade and stable isotropical refinement was achieved. Hydrogen atoms were placed in calculated positions and included as riding atoms with isotropic displacement parameters 1.2-1.5 times Ueq of the attached C atoms. The structures were examined using the Adsym subroutine of PLATON to assure that no additional symmetry could be applied to the models.


Modeling of electron density within the voids of the frameworks did not lead to identification of guest entities in this structure due to the disordered contents of the large pores in the frameworks. High esd's make it impossible to determine accurate positions for solvent molecules. Thus, first several unidentified peaks within void spaces which could not be assigned to any definite entity were modeled as isolated oxygen atoms.


The structure has been reported to display the framework of IRMOF-77 as isolated in the crystalline form. The structure is a two-fold interpenetrating cubic framework. To prove the correctness of the atomic positions in the framework, the application of the SQUEEZE routine of A. Spek has been performed. However atomic co-ordinates for the “non-SQUEEZE” structures are also presented. Thus the structure reported after SQUEEZE does not include any solvents. No absorption correction was performed. Final full matrix least-squares refinement on F2 converged to R1=0.0560 (F>2σ(F)) and wR2=0.1389 (all data) with GOF=0.950 For the structure where the SQUEEZE program has not been employed, final full matrix least-squares refinement on F2 converged to R1=0.1039 (F>2σ(F)) and wR2=0.3399 (all data) with GOF=1.141. A final ratio of 12.0 for reflections to parameters was achieved. For this structure the elevated R-values are commonly encountered in MOF crystallography, for the reasons expressed above, by us and other research groups.









TABLE 3





Crystal data and structure refinement for IRMOF-76
















Empirical formula
C69 H45 N6 O13 Zn4


Formula weight
1427.59


Temperature
258(2) K


Wavelength
1.54178 Å


Crystal system
Cubic


Space group
Fm 3m


Unit cell dimensions
a = 42.9245(2) Å α = 90.00°


b = 42.9245(2) Å
β = 90.00°


c = 42.9245(2) Å
γ = 90.00°


Volume
79088.9(6)


Z
8


Density (calculated)
0.240 Mg/m3


Absorption coefficient
0.368 mm−1


F(000)
5800


Crystal size
0.60 × 0.60 × 0.40 mm3


Theta range for data
1.78-40.06°


collection


Index ranges
−35 <= h <= 35, −34 <=



k <= 35, −34 <= l <= 31


Reflections collected
96360


Independent reflections
1260 [R(int) = 0.0707]


Completeness to theta =
40.06° 99.7%


Absorption correction
None


Refinement method
Full-matrix least-squares on F2


Data/restraints/parameters
1260/3/56


Goodness-of-fit on F2
1.941


Final R indices [I > 2sigma(I)]
R1 = 0.1465, wR2 = 0.4135


R indices (all data)
R1 = 0.1669, wR2 = 0.4378


Largest diff. peak and hole
0.450 and −0.278 e.Å−3
















TABLE 4





Crystal data and structure refinement for IRMOF-76 (SQUEEZE).
















Empirical formula
C69 H45 N6 O13 Zn4


Formula weight
1427.59


Temperature
258(2) K


Wavelength
1.54178 Å


Crystal system
Cubic


Space group
Fm 3m


Unit cell dimensions
a = 42.9245(2) Å α = 90.00°


b = 42.9245(2) Å
β = 90.00°


c = 42.9245(2) Å
γ = 90.00°


Volume
79088.9(6)


Z
8


Density (calculated)
0.240 Mg/m3


Absorption coefficient
0.368 mm−1


F(000)
5800


Crystal size
0.60 × 0.60 × 0.40 mm3


Theta range for data
1.78-40.06°


collection


Index ranges
−35 <= h <= 35, −34 <=



k <= 35, −34 <= l <= 31


Reflections collected
96360


Independent reflections
1260 [R(int) = 0.0597]


Completeness to theta =
40.06° 99.7%


Absorption correction
None


Refinement method
Full-matrix least-squares on F2


Data/restraints/parameters
1260/3/56


Goodness-of-fit on F2
0.912


Final R indices [I > 2sigma(I)]
R1 = 0.0549, wR2 = 0.1954


R indices (all data)
R1 = 0.0698, wR2 = 0.2166


Largest diff. peak and hole
0.120 and −0.316 e.Å−3
















TABLE 5





Crystal data and structure refinement for IRMOF-77
















Empirical formula
C84 H63 I6 N9 O14 Pd3 Zn4, 16(O)


Formula weight
3020.51


Temperature
258(2) K


Wavelength
1.54178 Å


Crystal system
Trigonal


Space group
R 3c


Unit cell dimensions
a = 31.0845(4) Å α = 90.00°


b = 31.0845(4) Å
β = 90.00°


c = 71.018(2) Å
γ = 120.00°


Volume
59427(2)


Z
12


Density (calculated)
1.013 Mg/m3


Absorption coefficient
10.364 mm−1


F(000)
17352


Crystal size
0.30 × 0.30 × 0.20 mm3


Theta range for data
2.06-39.74°


collection


Index ranges
−25 <= h <= 24, −25 <=



k <= 25, −55 <= l <= 58


Reflections collected
51319


Independent reflections
3946 [R(int) = 0.1843]


Completeness to theta =
39.74° 99.8%


Absorption correction
None


Refinement method
Full-matrix least-squares on F2


Data/restraints/parameters
3946/0/327


Goodness-of-fit on F2
1.141


Final R indices [I > 2sigma(I)]
R1 = 0.1033, wR2 = 0.2897


R indices (all data)
R1 = 0.1754, wR2 = 0.3399


Largest diff. peak and hole
0.987 and −0.706 e.Å−3
















TABLE 6





Crystal data and structure refinement for IRMOF-77 (SQUEEZE)


















Empirical formula
C84 H63 I6 N9 O13 Pd3 Zn4



Formula weight
2748.51



Temperature
258(2) K



Wavelength
1.54178 Å



Crystal system
Trigonal



Space group
R 3c



Unit cell dimensions
a = 31.0845(4) Å α = 90.00°



b = 31.0845(4) Å
β = 90.00°



c = 71.018(2) Å
γ = 120.00°



Volume
59427(2)



Z
12



Density (calculated)
0.922 Mg/m3



Absorption coefficient
10.259 mm−1



F(000)
15720



Crystal size
0.30 × 0.30 × 0.20 mm3



Theta range for data
2.06-39.74°



collection



Index ranges
−25 <= h <= 24, −25 <=




k <= 25, −55 <= l <= 58



Reflections collected
51319



Independent reflections
3946 [R(int) = 0.1455]



Completeness to theta =
39.74° 99.8%



Absorption correction
None



Refinement method
Full-matrix least-squares on F2



Data/restraints/parameters
3946/0/333



Goodness-of-fit on F2
0.950



Final R indices [I > 2σ(I)]
R1 = 0.0560, wR2 = 0.1239



R indices (all data)
R1 = 0.1070, wR2 = 0.1389



Largest diff. peak and hole
0.958 and −0.350 e.Å−3










The successful isoreticular covalent transformation followed by metalation as demonstrated herein opens a route for incorporating metal ions into a wide range of frameworks. Fundamentally, it expands the reaction space that can be carried out within MOFs.


Synthetic procedure for Zr-aminoterephalate MOF: 40 mg (ZrCl4) with 2-aminoterephalic acid 100 mg was placed in a glass vial with 40 ml of DMF. The reaction was heated at 85° C. for three days. The powder was filtered exchanged in chloroform 3×40 ml.


Experimental and Simulated Powder X-Ray Diffraction Patterns. Powder X-ray diffraction (PXRD) data were collected using a Bruker D8-Discover θ-2θ diffractometer in reflectance Bragg-Brentano geometry. Cu κα1 radiation (λ=1.5406 Å; 1600 W, 40 kV, 40 mA) was focused using a planar Gobel Mirror riding the κα line. A 0.6 mm divergence slit was used for all measurements. Diffracted radiation was detected using a Vantec line detector (Bruker AXS, 6° 2θ sampling width) equipped with a Ni monochromator. All samples were mounted on a glass slide fixed on a sample holder by dropping crystals and then leveling the sample surface with a wide blade spatula. The best counting statistics were achieved by using a 0.02° 2θ step scan from 2-50° with an exposure time of 0.4 s per step.


Thermal Gravimetric Analysis (TGA) Data for IRMOF-76, 77. All samples were run on a TA Instruments Q-500 series thermal gravimetric analyzer with samples held in platinum pan in a continuous flow nitrogen atmosphere. Samples were heated at a constant rate of 5° C./min during all TGA experiments.


Porosity Measurements for IRMOF-77. Low pressure gas adsorption isotherms were measured volumetrically on an Autosorb-1 analyzer (Quantachrome Instruments). A liquid N2 bath (77 K) was used for N2 isotherm measurements. The N2 and He gases used were UHP grade (99.999%). For the calculation of surface areas, the Langmuir and BET methods were applied using the adsorption branches of the N2 isotherms assuming a N2 cross-sectional area of 16.2 Å2/molecule. The Langmuir and BET surface areas are estimated to be 1610 and 1590 m2 g−1, respectively. The pore volume was determined using the Dubinin-Raduskavich (DR) method with the assumption that the adsorbate is in the liquid state and the adsorption involves a pore-filling process. Given the bulk density of IRMOF-77 (0.922 g cm−3), calculated pore volume (0.57 cm3 g−1) corresponds to 0.53 cm3 cm−3.


This example targeted a structure based on the well-known primitive cubic MOF-5 and utilized a linear ditopic carboxylate link that could accommodate an NHC-metal complex or its precursor. The disclosure demonstrates a convergent synthetic route for new links utilizing cross-coupling reactions as the key step to combine the imidazolium core with the carboxylate modules (Scheme 2, above).


The synthesis of 4,7-bis(4-carboxylphenyl)-1,3-dimethylbenzimidazium tetrafluoroborate (L0) starts from the known 4,7-dibromobenzthiaziazole (1). Cobalt-catalyzed reduction with sodium borohydride followed by acid-catalyzed condensation with triethylorthoformate converted thiaziazole to benzimidazole. Successive N-methylation produced a dibromobenzimidazole core (2). Pd(0)-catalyzed Suzuki-Miyaura cross-coupling between 2 and 4-(tert-butoxycarbonyl)phenylpinacolborane (3) resulted in the diester-terminated linear terphenyl strut (4).


In particular, for the synthesis of L0, the module possessing a tert-butyl ester as a masked carboxylic acid was selected because of improved solubility and feasible late-stage unmasking of carboxylic acid. Treatment with an excess of methyl iodide produced 5, possessing the N,N′-dimethylbenzimidazolium moiety. L0 was then obtained by deprotection of two tert-butyl esters using HBF4 concomitant with counteranion substitution from I to BF4. All conversions were feasible on a gram scale.


The synthesis of IRMOF-76 was carried out using a mixture of three equivalents of Zn(BF4)2.xH2O, ten equivalents of KPF6 and L0 in N,N-dimethylformamide (DMF). The mixture was heated at 100° C. for 36 h, whereupon colorless crystals of IRMOF-76 (Zn4O(C23H15N2O4) (X)3 (X=BF4, PF6, OH)) were obtained.


Single crystal X-ray diffraction analysis revealed that IRMOF-76 is isoreticular with MOF-5. Here, Zn4O units are connected to six L0 links to form a cubic framework of pcu topology (FIG. 6a). IRMOF-76 is a non-interpenetrated cationic MOF possessing imidazolium moieties (NHC precursors) on each link. The ICP analysis and 19F NMR spectrum of digested IRMOF-76 reveal that both BF4 and PF6 are included as counter-anions of the imidazolium moieties.


A strategy using a link possessing a metal-NHC complex was developed. The metal-NHC bond is generally stable even under mild acidic conditions, and chemoselective NHC-coordination avoids undesired reactions with metal sources in the construction of secondary building units (SBUs), which, in many cases, relies on oxygen-metal coordination. In the specific example described herein, [4,7-bis(4-carboxylphenyl)-1,3-dimethylbenzimidazole-2-ylidene] (pyridyl) palladium(II) iodide (L1, Scheme 2) was used, which is potentially attractive as a catalyst homologous to known homogeneous catalyst systems.


L1 was prepared from intermediate 5 (Scheme 2). The benzimidazolium moiety of 5 was converted to the NHC—PdI2(py) complex when refluxed in pyridine with a Pd(II) source, a base (K2CO3), and an iodide source (NaI). Deprotection of the tert-butyl esters was achieved with trimethylsilyl trifluoromethanesulfonate (TMSOTf). The covalently formed Pd(II)-NHC bond was surprisingly stable even under the strongly Lewis acidic conditions for deprotection. However, the pyridine co-ligand was removed to form dimeric complexes. Adding pyridine as a ligand was necessary to produce L1 possessing a monomeric NHC—PdI2(py) moiety.


The synthesis of IRMOF-77 was conducted using Zn(NO3)2.6H2O of three equivalents to L1 in a solvent mixture of N,N-diethylformamide (DEF) and pyridine (75/1). The mixture was heated at 100° C. for 30 h, whereupon orange crystals of IRMOF-77 (Zn4O(C28H21I2N3O4Pd)3) were obtained.


X-ray single crystal structure analysis reveals that IRMOF-77 is also isoreticular with MOF-5. The X-ray crystal structure verifies the presence of the NHC—PdI2(py) moiety (FIG. 6b). The Zn ions used for the construction of the framework are not involved in binding with the metal-NHC moiety. Measured elemental compositions in accordance with the expected values confirm the absence of undesired metal exchange on NHC. The observed Pd—C distance (1.925 Å) and coordination geometry match well with those found in the Cambridge Structural Database for NHC—PdX2(py) (X=halide) complexes. The presence of the Pd(II)-NHC bond was further confirmed by the solid state 13C cross-polarization magic angle spinning (CP/MAS) NMR spectrum (δ=154.1 ppm for N—C:—N). NHC—Pd(II) moieties are positioned on every face of the cubic cage within the framework. Two interwoven frameworks were formed with ca. 7 Å offset distance (FIG. 6c), presumably to mitigate the interference of the metal —NHC moieties with each other, with 4.06 Å shortest distances between two methyl carbons from two frameworks. As a result, the catenation is different from that of IRMOF-15, whose link length is the same as L1. Due to the interwoven nature of the structure, the pore aperture is ca. 5 Å×10 Å. All immobilized Pd(II) centers protrude into the pores without blocking each other.


To confirm the presence of void space and the architectural stability of IRMOF-77, the permanent porosity was demonstrated by the N2 adsorption isotherm of the guest-free samples. The isotherm shows steep N2 uptake in the low-pressure region, which indicates that the material is microporous (FIG. 7). The Langmuir and BET surface areas of activated IRMOF-77 are calculated to be 1,610 and 1,590 m2 g−1, respectively. The amount of N2 uptake in the pores (P/P0=0.9) corresponds to 46 N2 molecules per formula unit or 552 per unit cell.


To examine the reactivity of the immobilized Pd(II) centers of IRMOF-77, ligand exchange experiments were carried out by immersing as-synthesized crystals of IRMOF-77 in 4 v/v % quinoline/DMF solution for one day at room temperature. A comparison between the powder X-ray diffraction (PXRD) patterns before and after exchange reveals that the framework remains intact during the exchange process (FIG. 8). No signal from the pyridine protons is observed in the 1H NMR spectrum of the digested MOF after ligand exchange. Only the signals from quinoline are observed with the expected molar stoichiometry (carboxylate link:quinoline=1:1). Retention of the NHC—Pd bond is confirmed by the 13C CP/MAS solid state NMR spectrum (before: 154.1 ppm, after: 152.9 ppm). These results indicate the presence of NHC—PdI2(quinoline) complex after ligand exchange.


The structures of IRMOF-76 and 77 demonstrate the successful application of the methods of the disclosure to immobilize Pd(II) —NHC organometallic complex in MOFs without losing the MOF's porosity and its structural order.


A number of embodiments of the invention have been described. Nevertheless, it will be understood that various modifications may be made without departing from the spirit and scope of the invention. Accordingly, other embodiments are within the scope of the following claims.

Claims
  • 1-14. (canceled)
  • 15. A framework comprising repeating cores, wherein the cores are comprised of one or more organic-based links that are linked to one or more metals, metal ions, metal containing compounds or organic-based links, through one or more linking clusters, and wherein at least one of the organic-based links has at least one functional group that can be reacted with a post framework reactant to afford a reactive side group that can chelate a post-framework metal, metal ion, or metal containing compound.
  • 16. The framework of claim 15, wherein the framework is a MOF or ZIF, and the one or more organic-based links are one or more linking moieties comprising optionally substituted aryls, optionally substituted heterocycles, or a combination thereof, which are linked to one or more framework metals, metal ions, or metal containing compounds through linking clusters; and wherein at least one of the linking moieties of the framework is substituted with at least one functional group that can be reacted with a post-framework reactant to afford a reactive side group which can chelate a post-framework metal, metal ion, or metal containing compound.
  • 17. The framework of claim 15, wherein one or more post-framework metal ions is selected from the group consisting of Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, W3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si4+, Si2+, Ge4+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+.
  • 18. The MOF or ZIF of claim 16, wherein one or more framework metal ions is selected from the group consisting of Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, VV3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si+, Si2+, Gel+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+.
  • 19. The MOF of claim 16, wherein one or more linking moieties are selected from the group consisting of:
  • 20. The MOF or ZIF of claim 16, wherein the functional group is an amine.
  • 21. The MOF or ZIF of claim 20, wherein the amine is reacted with a carbonyl containing post-framework reactant to form an imine-based polydentate ligand, and wherein this imine-based polydentate ligand can complex with a post-framework metal, metal ion, or metal containing compound.
  • 22. The MOF or ZIF of claim 21, wherein the carbonyl containing post-framework reactant is 2-pyridinecarboxaldehyde.
  • 23. A method of making the framework of claim 15, comprising reacting a framework comprising at least one organic-based link that contains at least one amine group with 2-pyridinecarboxaldehyde to obtain an imine functionalized organic-based link and then contacting the framework with one or more post framework metals, metal ions, or metal containing compounds that chelate to the imine functionalized organic-based link.
  • 24. A gas storage composition comprising the framework of claim 15.
  • 25. A catalyst composition comprising the framework of claim 15.
  • 26. A framework comprising repeating cores, wherein the cores are comprised of one or more organic-based links that are linked to one or more metals, metal ions, or organic-based links, through one or more linking clusters, and wherein at least one of the organic-based links has a carbene that can be metallated with a modifying metal, metal ion, or metal containing compound.
  • 27. The framework of claim 26, wherein the framework is a ZIF or MOF, and the one or more organic-based links are one or more linking moieties comprising optionally substituted aryls, optionally substituted heterocycles, or a combination thereof, which are linked to one or more framework metals, metal ions, or metal containing compounds through linking clusters; and wherein at least one of the linking moieties contains at least one carbene that can be metallated with a modifying metal, metal ion, or metal containing compound.
  • 28. The framework of claim 26, wherein one or more modifying metal ions is selected from the group consisting of Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, W3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si4+, Si2+, Ge4+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+.
  • 29. The ZIF or MOF of claim 27, wherein one or more framework metal ions is selected from the group consisting of Li+, Na+, Rb+, Mg2+, Ca2+, Sr2+, Ba2+, Sc3+, Ti4+, Zr4+, Ta3+, Cr3+, Mo3+, W3+, Mn3+, Fe3+, Fe2+, Ru3+, Ru2+, Os3+, Os2+, Co3+, Co2+, Ni2+, Ni+, Pd2+, Pd+, Pt2+, Pt+, Cu2+, Cu+, Au+, Zn2+, Al3+, Ga3+, In3+, Si4+, Si2+, Ge4+, Ge2+, Sn4+, Sn2+, Bi5+, Bi3+.
  • 30. The MOF of claim 27, wherein at least one linking moiety has the structure of:
  • 31. The MOF of claim 30, wherein the MOF has the structure and characteristics of IRMOF-76.
  • 32. The ZIF or MOF of claim 27, wherein the reactive carbine containing linking moiety is metallated with a modifying metal, metal ion, or metal containing compound.
  • 33. The MOF of claim 32, wherein the MOF has the structure and characteristics of IRMOF-77.
  • 34. A method of making the framework of claim 26 comprising reacting at least one organic-based link comprising at least one carbene and comprising a protected linking cluster with a modifying metal, metal ion, or metal containing compound to obtain a metallated linking moiety, deprotecting the linking cluster and reacting the metallated organic-based link with a framework metal, metal ion, or metal containing compound or with another organic-based link that may or may not contain a carbene.
  • 35. A gas storage composition comprising the framework of claim 26.
  • 36. A catalyst composition comprising the framework of claim 26.
CROSS REFERENCE TO RELATED APPLICATIONS

This application claims priority under 35 U.S.C. §119 from Provisional Application Ser. Nos. 61/218,891, filed Jun. 19, 2009, and 61/247,351, filed Sep. 30, 2009, the disclosures of which are incorporated herein by reference.

STATEMENT REGARDING FEDERALLY SPONSORED RESEARCH

This invention was funded by grant number DE-FG36-05GO15001 awarded by the Department of Energy and grant number HDTRA1-08-10023 awarded by the Department of Defense. The U.S. government has certain rights in this invention.

PCT Information
Filing Document Filing Date Country Kind 371c Date
PCT/US10/39284 6/19/2010 WO 00 6/27/2012
Provisional Applications (3)
Number Date Country
61218891 Jun 2009 US
61247351 Sep 2009 US
61302300 Feb 2010 US