Peptide boronic acids useful in making salts thereof

Information

  • Patent Application
  • 20050176651
  • Publication Number
    20050176651
  • Date Filed
    September 08, 2004
    20 years ago
  • Date Published
    August 11, 2005
    19 years ago
Abstract
Tripeptide boronic acids of (R,S,R) configuration, for example Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, and their use to make base addition salts of such acids. The salts are formulated into anti-thrombotic pharmaceutical formulations.
Description
BACKGROUND

The present disclosure relates to boronic acids, particularly peptide boronic acids. It relates also to pharmaceutically useful products obtainable from organoboronic acids. The disclosure also relates to the use of members of the aforesaid class of products, to their formulation, their preparation, their synthetic intermediates and to other subject matter.


Boronic Acid Compounds


It has been known for some years that boronic acid compounds and their derivatives, e.g. esters, have biological activities, notably as inhibitors or substrates of proteases. For example, Koehler et al. Biochemistry 10: 2477, 1971 report that 2-phenylethane boronic acid inhibits the serine protease chymotrypsin at millimolar levels. The inhibition of chymotrypsin and subtilisin by arylboronic acids (phenylboronic acid, m-nitro-phenylboronic acid, m-aminophenylboronic acid, m-bromophenylboronic acid) is reported by Phillip et al, Proc. Nat. Acad. Sci. USA 68: 478-480, 1971. A study of the inhibition of subtilisin Carlsberg by a variety of boronic acids, especially phenyl boronic acids substituted by Cl, Br, CH3, H2N, MeO and others, is described by Seufer-Wasserthal et al, Biorg. Med. Chem. 2(1): 35-48, 1994.


In describing inhibitors or substrates of proteases, P1, P2, P3, etc. designate substrate or inhibitor residues which are amino-terminal to the scissile peptide bond, and S1, S2, S3, etc., designate the corresponding subsites of the cognate protease in accordance with: Schechter, I. and Berger, A. On the Size of the Active Site in Proteases, Biochem. Biophys. Res. Comm., 27: 157-162, 1967. In thrombin, the S1 binding site or “specificity pocket” is a well defined slit in the enzyme, whilst the S2 and S3 binding subsites (also respectively called the proximal and distal hydrophobic pockets) are hydrophobic and interact strongly with, respectively, Pro and (R)-Phe, amongst others.


Pharmaceutical research into serine protease inhibitors has moved from the simple arylboronic acids to boropeptides, i.e. peptides containing a boronic acid analogue of an α-amino carboxylic acid. The boronic acid may be derivatised, often to form an ester. Shenvi (EP-A-145441 and U.S. Pat. No. 4,499,082) disclosed that peptides containing an α-aminoboronic acid with a neutral side chain were effective inhibitors of elastase and has been followed by numerous patent publications relating to boropeptide inhibitors of serine proteases. Specific, tight binding boronic acid inhibitors have been reported for elastase (Ki, 0.25 nM), chymotrypsin (Ki, 0.25 nM), cathepsin G (Ki, 21 nM), α-lytic protease (Ki, 0.25 nM), dipeptidyl aminopeptidase type IV (Ki, 16 pM) and more recently thrombin (Ac-D-Phe-Pro-boroArg-OH (DuP 714 initial Ki 1.2 nM).


Claeson et al (U.S. Pat. No. 5,574,014 and others) and Kakkar et al (WO 92/07869 and family members including U.S. Pat. No. 5,648,338) disclose thrombin inhibitors having a neutral C-terminal side chain, for example an alkyl or alkoxyalkyl side chain.


Modifications of the compounds described by Kakkar et al are included in WO 96/25427, directed to peptidyl serine protease inhibitors in which the P2-P1 natural peptide linkage is replaced by another linkage. As examples of non-natural peptide linkages may be mentioned —CO2—, —CH2O—, —NHCO—, —CHYCH2—, —CH═CH—, —CO(CH2)pCO— where p is 1, 2 or 3, —COCHY—, —CO2—CH2NH—, —CHY—NX—, —N(X)CH2—N(X)CO—, —CH═C(CN)CO—, —CH(OH)—NH—, —CH(CN)—NH—, —CH(OH)—CH2— or —NH—CHOH—, where X is H or an amino protecting group and Y is H or halogen, especially F. Particular non-natural peptide linkages are —CO2— or —CH2O—.


Metternich (EP 471651 and U.S. Pat. No. 5,288,707, the latter being assigned to Trigen Limited) discloses variants of Phe-Pro-BoroArg boropeptides in which the P3 Phe is replaced by an unnatural hydrophobic amino acid such as trimethylsilylalanine, p-tert.butyl-diphenyl-silyloxymethyl-phenylalanine or p-hydroxymethylphenylalanine and the P1 side chain may be neutral (alkoxyalkyl, alkylthioalkyl or trimethylsilylalkyl).


The replacement of the P2 Pro residue of borotripeptide thrombin inhibitors by an N-substituted glycine is described in Fevig J M et al Bioorg. Med. Chem. 8: 301-306 and Rupin A et al Thromb. Haemost 78(4): 1221-1227, 1997. See also U.S. Pat. No. 5,585,360 (de Nanteuil et al).


Amparo (WO 96/20698 and family members including U.S. Pat. No. 5,698,538) discloses peptidomimetics of the structure Aryl-linker-Boro(Aa), where Boro(Aa) may be an aminoboronate residue with a non-basic side chain, for example BoroMpg. The linker is of the formula —(CH2)mCONR— (where m is 0 to 8 and R is H or certain organic groups) or analogues thereof in which the peptide linkage —CONR— is replaced by —CSNR—, —SO2NR—, —CO2—, —C(S)O— or —SO2O—. Aryl is phenyl, naphthyl or biphenyl substituted by one, two or three moieties selected from a specified group. Most typically these compounds are of the structure Aryl-CH2)n—CONH—CHR2—BY1Y2, where R2 is for example a neutral side chain as described above and n is 0 or 1.


Non-peptide boronates have been proposed as inhibitors of proteolytic enzymes in detergent compositions. WO 92/19707 and WO 95/12655 report that arylboronates can be used as inhibitors of proteolytic enzymes in detergent compositions. WO 92/19707 discloses compounds substituted meta to the boronate group by a hydrogen bonding group, especially acetamido (—NHCOCH3), sufonamido (—NHSO2CH3) and alkylamino. WO 95/12655 teaches that ortho-substituted compounds are superior.


Boronate enzyme inhibitors have wide application, from detergents to bacterial sporulation inhibitors to pharmaceuticals. In the pharmaceutical field, there is patent literature describing boronate inhibitors of serine proteases, for example thrombin, factor Xa, kallikrein, elastase, plasmin as well as other serine proteases like prolyl endopeptidase and Ig AI Protease. Thrombin is the last protease in the coagulation pathway and acts to hydrolyse four small peptides form each molecule of fibrinogen, thus deprotecting its polymerisation sites. Once formed, the linear fibrin polymers may be cross-linked by factor XIIIa, which is itself activated by thrombin. In addition, thrombin is a potent activator of platelets, upon which it acts at specific receptors. Thrombin also potentiates its own production by the activation of factors V and VIII.


Other aminoboronate or peptidoboronate inhibitors or substrates of serine proteases are described in:

    • U.S. Pat. No. 4,935,493
    • EP 341661
    • WO 94/25049
    • WO 95/09859
    • WO 96/12499
    • WO 96/20689
    • Lee S-L et al, Biochemistry 36: 13180-13186, 1997
    • Dominguez C et al, Bioorg. Med. Chem. Lett. 7: 79-84, 1997
    • EP 471651
    • WO 94/20526
    • WO 95/20603
    • WO97/05161
    • U.S. Pat. No. 4,450,105
    • U.S. Pat. No. 5,106,948
    • U.S. Pat. No. 5,169,841.


Peptide boronic acid inhibitors of hepatic C virus protease are described in WO 01/02424.


Matteson D S Chem. Rev. 89: 1535-1551, 1989 reviews the use of α-halo boronic esters as intermediates for the synthesis of inter alia amino boronic acids and their derivatives. Matteson describes the use of pinacol boronic esters in non-chiral synthesis and the use of pinanediol boronic esters for chiral control, including in the synthesis of amino and amido boronate esters.


Contreras et al J. Organomet. Chem. 246: 213-217, 1983 describe how intramolecular N→B coordination was demonstrated by spectroscopic studies on cyclic boronic esters prepared by reacting Me2CHCMe2—BH2 with diethanolamines.


Boronic acid and ester compounds have displayed promise as inhibitors of the proteasome, a multicatalytic protease responsible for the majority of intracellular protein turnover. Ciechanover, Cell, 79: 13-21, 1994, teaches that the proteasome is the proteolytic component of the ubiquitin-proteasome pathway, in which proteins are targeted for degradation by conjugation to multiple molecules of ubiquitin. Ciechanover also teaches that the ubiquitin-proteasome pathway plays a key role in a variety of important physiological processes.


Adams et al, U.S. Pat. No. 5,780,454 (1998), U.S. Pat. No. 6,066,730 (2000), U.S. Pat. No. 6,083,903 (2000) and equivalent WO 96/13266, and U.S. Pat. No. 6,297,217 (2001) describe peptide boronic ester and acid compounds useful as proteasome inhibitors. These documents also describe the use of boronic ester and acid compounds to reduce the rate of muscle protein degradation, to reduce the activity of NF-κB in a cell, to reduce the rate of degradation of p53 protein in a cell, to inhibit cyclin degradation in a cell, to inhibit the growth of a cancer cell, to inhibit antigen presentation in a cell, to inhibit NF-κB dependent cell adhesion, and to inhibit HIV replication. Brand et al, WO 98/35691, teaches that proteasome inhibitors, including boronic acid compounds, are useful for treating infarcts such as occur during stroke or myocardial infarction. Elliott et al, WO 99/15183, teaches that proteasome inhibitors are useful for treating inflammatory and autoimmune diseases.


Unfortunately, organoboronic acids can be relatively difficult to obtain in analytically pure form. Thus, alkylboronic acids and their boroxines are often air-sensitive. Korcek et al, J. Chem. Soc. Perkin Trans. 2: 242, 1972, teaches that butylboronic acid is readily oxidized by air to generate 1-butanol and boric acid.


It is known that derivatisation of boronic adds as cyclic esters provides oxidation resistance. For example, Martichonok V et al J. Am. Chem. Soc. 118: 950-958, 1996 state that diethanolamine derivatisation provides protection against possible boronic acid oxidation. U.S. Pat. No. 5,681,978 (Matteson D S et al) teaches that 1,2-diols and 1,3 diols, for example pinacol, form stable cyclic boronic esters that are not easily oxidised.


Wu et al, J. Pharm. Sci., 89: 758-765, 2000, discuss the stability of the compound N-(2-pyrazine) carbonyl-phenylalanine-leucine boronic add (LDP-341, also known as bortezomib), an anti-cancer agent. It is described how “during an effort to formulate [LDP-341] for parenteral administration, the compound showed erratic stability behaviour”. The degradation pathways were investigated and it was concluded that the degradation was oxidative, the initial oxidation being attributed to peroxides or molecular oxygen and its radicals.


WO 02/059131 discloses boronic acid products which are described as stable. In particular, these products are certain boropeptides and/or boropeptidomimetics in which the boronic acid group has been derivatised with a sugar. The disclosed sugar derivatives, which have hydrophobic amino acid side chains, are of the formula
embedded image

wherein:

    • P is hydrogen or an amino-group protecting moiety;
    • R is hydrogen or alkyl;
    • A is 0, 1 or 2;
    • R1, R2 and R3 are independently hydrogen, alkyl, cycloalkyl, aryl or —CH2—R5;
    • R5, in each instance, is one of aryl, aralkyl, alkaryl, cycloalkyl, heterocyclyl, heteroaryl, or —W—R6, where W is a chalcogen and R6 is alkyl;
    • where the ring portion of any of said aryl, aralkyl, alkaryl, cycloalkyl, heterocyclyl, or heteroaryl in R1, R2, R3 or R5 can be optionally substituted; and
    • Z1 and Z2 together form a moiety derived from a sugar, wherein the atom attached to boron in each case is an oxygen atom.


Some of the disclosed compounds are sugar derivatives of LDP-341 (see above).


Many drugs comprise an active moiety which is a carboxylic acid. There are a number of differences between carboxylic acids and boronic acids, whose effects on drug delivery, stability and transport (amongst others) have not been investigated. One feature of trivalent boron compounds is that the boron atom is sp2 hybridised, which leaves an empty 2pz orbital on the boron atom. A molecule of the type BX3 can therefore act as an electron-pair acceptor, or Lewis acid. It can use the empty 2pz orbital to pick up a pair of nonbonding electrons from a Lewis base to form a covalent bond. BF3 therefore reacts with Lewis bases such as NH3 to form acid-base complexes in which all of the atoms have a filled shell of valence electrons.


Boric acid, accordingly, can act as a Lewis acid, accepting OH:

B(OH)3+H2O→B(OH)4+H+


Further, boronic acids of the type RB(OH)2 are dibasic and have two pKa's. Another point of distinction about boron compounds is the unusually short length of bonds to boron, for which three factors may be responsible:

  • 1. Formation of pΠ-pΠ bonds;
  • 2. Ionic-covalent resonance;
  • 3. Reduced repulsions between non-bonding electrons.


The presumed equilibria of boronic and carboxylic acids in aqueous KOH are shown below (excluding formation of RBO22−):
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Aminoboronate Synthesis


It is known in the prior art to synthesise TRI 50c esters via the following process:
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The product of the above step is then converted by known methods to, for example, TRI 50b. See for example Deadman J et al, J. Medicinal Chemistry 1995, 38, 1511-1522.


Thrombosis


Hemostasis is the normal physiological condition of blood in which its components exist in dynamic equilibrium. When the equilibrium is disturbed, for instance following injury to a blood vessel, certain biochemical pathways are triggered leading, in this example, to arrest of bleeding via clot formation (coagulation). Coagulation is a dynamic and complex process in which proteolytic enzymes such as thrombin play a key role. Blood coagulation may occur through either of two cascades of zymogen activations, the extrinsic and intrinsic pathways of the coagulation cascade. Factor VIIa in the extrinsic pathway, and Factor IXa in the intrinsic pathway are important determinants of the activation of factor X to factor Xa, which itself catalyzes the activation of prothrombin to thrombin, whilst thrombin in turn catalyses the polymerization of fibrinogen monomers to fibrin polymer. The last protease in each pathway is therefore thrombin, which acts to hydrolyze four small peptides (two FpA and two FpB) from each molecule of fibrinogen, thus deprotecting its polymerization sites. Once formed, the linear fibrin polymers may be cross-linked by factor XIIIa, which is itself activated by thrombin. In addition, thrombin is a potent activator of platelets, upon which it acts at specific receptors. Thrombin activation of platelets leads to aggregation of the cells and secretion of additional factors that further accelerate the creation of a hemostatic plug. Thrombin also potentiates its own production by the activation of factors V and VIII (see Hemker and Beguin in: Jolles, et. al., “Biology and Pathology of Platelet Vessel Wall Interactions,” pp. 219-26 (1986), Crawford and Scrutton in: Bloom and Thomas, “Haemostasis and Thrombosis,” pp. 47-77, (1987), Bevers, et. al., Eur. J. Biochem. 122: 429-36, 1982, Mann, Trends Biochem. Sci. 12: 229-33, 1987).


Proteases are enzymes which cleave proteins at specific peptide bonds. Cuypers et al., J. Biol. Chem. 257: 7086, 1982, and the references cited therein, classify proteases on a mechanistic basis into five classes: serine, cysteinyl or thiol, acid or aspartyl, threonine and metalloproteases. Members of each class catalyse the hydrolysis of peptide bonds by a similar mechanism, have similar active site amino acid residues and are susceptible to class-specific inhibitors. For example, all serine proteases that have been characterised have an active site serine residue.


The coagulation proteases thrombin, factor Xa, factor VIIa, and factor IXa are serine proteases having trypsin-like specificity for the cleavage of sequence-specific Arg-Xxx peptide bonds. As with other serine proteases, the cleavage event begins with an attack of the active site serine on the scissile bond of the substrate, resulting in the formation of a tetrahedral intermediate. This is followed by collapse of the tetrahedral intermediate to form an acyl enzyme and release of the amino terminus of the cleaved sequence. Hydrolysis of the acyl enzyme then releases the carboxy terminus.


As indicated above, platelets play two important roles in normal hemostasis. First, by aggregating, they constitute the initial hemostatic plug which immediately curtails bleeding from broken blood vessels. Secondly, the platelet surface can become activated and potentiate blood clotting, a property referred to as platelet procoagulant activity. This may be observed as an increase in the rate of activation of prothrombin by factor Xa in the presence of factor Va and Ca2+, referred to as the prothrombinase reaction. Normally, there are few (if any) clotting factors on the surface of unstimulated platelets but, when platelets are activated, negatively charged phospholipids (phosphatidylserine and phospatidylinositol) that are normally on the cytoplasmic side of the membrane become available and provide a surface on which two steps of the coagulation sequence occur. The phospholipid on the surface of activated platelets profoundly accelerates the reactions leading to the formation of thrombin, so that thrombin can be generated at a rate faster than its neutralisation by antithrombin III. The reactions that occur on the platelet surfaces are not easily inhibited by the natural anticoagulants in blood such as antithrombin III, either with or without heparin. (See Kelton and Hirsch in: Bloom and Thomas, “Haemostasis and Thrombosis,” pp. 737-760, (1981); Mustard et al in: Bloom and Thomas, “Haemostasis and Thrombosis,” pp. 503526, (1981); Goodwin et al; Biochem. J. 308: 15-21, 1995).


A thrombus can be considered as an abnormal product of a normal mechanism and can be defined as a mass or deposit formed from blood constituents on a surface of the cardiovascular system, for example of the heart or a blood vessel. Thrombosis can be regarded as the pathological condition wherein improper activity of the hemostatic mechanism results in intravascular thrombus formation. Three basic types of thrombi are recognised:

    • the white thrombus which is usually seen in arteries and consists chiefly of platelets;
    • the red thrombus which is found in veins and is composed predominantly of fibrin and red cells;
    • the mixed thrombus which is composed of components of both white and red thrombi.


The composition of thrombi is influenced by the velocity of blood flow at their sites of formation. In general white platelet-rich thrombi form in high flow systems, while red coagulation thrombi form in regions of stasis. The high shear rate in arteries prevents the accumulation of coagulation intermediates on the arterial side of the circulation: only platelets have the capacity to form thrombi binding to the area of damage via von Willebrand factor. Such thrombi composed only of platelets are not stable and disperse. If the stimulus is strong then the thrombi will form again and then disperse continually until the stimulus has diminished. For the thrombus to stabilise, fibrin must form. In this respect, small amounts of thrombin can accumulate within the platelet thrombus and activate factor Va and stimulate the platelet procoagulant activity. These two events lead to an overall increase in the rate of activation of prothrombin by factor Xa of 300,000 fold. Fibrin deposition stabilises the platelet thrombus. Indirect thrombin inhibitors, for example heparin, are not clinically effective at inhibiting stimulation of platelet procoagulant activity. Accordingly, a therapeutic agent which inhibits platelet procoagulant activity would be useful for treating or preventing arterial thrombotic conditions.


On the venous side of circulation, the thrombus is comprised of fibrin: thrombin can accumulate because of the slower flow on the venous side and platelets play only a minor role.


Thrombosis is thus not considered to be a single indication but, rather, is a class of indications embracing distinct sub-classes for which differing therapeutic agents and/or protocols may be appropriate. Thus, regulatory authorities treat disorders such as, for example, deep vein thrombosis, cerebrovascular arterial thrombosis and pulmonary embolism as distinct indications for the purposes of licensing medicines. Two main sub-classes of thrombosis are arterial thrombosis and venous thrombosis. Arterial thrombosis includes such specific disorders as acute coronary syndromes [for example acute myocardial infarction (heart attack, caused by thrombosis in a coronary artery)], cerebrovascular arterial thrombosis (stroke, caused by thrombosis in the cerebrovascular arterial system) and peripheral arterial thrombosis. Examples of conditions caused by venous thrombosis are deep vein thrombosis and pulmonary embolism.


The management of thrombosis commonly involves the use of antiplatelet drugs (inhibitors of platelet aggregation) to control future thrombogenesis and thrombolytic agents to lyse the newly formed clot, either or both such agents being used in conjunction or combination with anticoagulants. Anticoagulants are used also preventatively (prophylactically) in the treatment of patients thought susceptible to thrombosis.


Currently, two of the most effective classes of drugs in clinical use as anticoagulants are the heparins and the vitamin K antagonists. The heparins are ill-defined mixtures of sulfated polysaccharides that bind to, and thus potentiate, the action of antithrombin III. Antithrombin III is a naturally occurring inhibitor of the activated clotting factors IXa, Xa, XIa, thrombin and probably XIIa (see Jaques, Pharmacol. Rev. 31: 99-166, 1980). The vitamin K antagonists, of which warfarin is the most well-known example, act indirectly by inhibiting the post-ribosomal carboxylations of the vitamin K dependent coagulation factors II, VII, IX and X (see Hirsch, Semin. Thromb. Hemostasis 12: 1-11, 1986). While effective therapies for the treatment of thrombosis, heparins and vitamin K antagonists have the unfortunate side effects of bleeding, heparin-induced thrombocytopenia (in the case of heparin) and marked interpatient variability, resulting in a small and unpredictable therapeutic safety margin.


The use of direct acting inhibitors of thrombin and other serine protease enzymes of the coagulation system is expected to alleviate these problems. To that end, a wide variety of serine protease inhibitors have been tested, including boropeptides, i.e. peptides containing a boronic acid analogue of an α-amino acid. Whilst direct acting boronic acid thrombin inhibitors have been discussed earlier in this specification, they are further described in the following section.


Neutral P1 Residue Boropeptide Thrombin Inhibitors


Claeson et al (U.S. Pat. No. 5,574,014 and others) and Kakkar et al (WO 92/07869 and family members including U.S. Pat. No. 5,648,338) disclose lipophilic thrombin inhibitors having a neutral (uncharged) C-terminal (P1) side chain, for example an alkoxyalkyl side chain.


The Claeson et al and Kakkar et al patent families disclose boronate esters containing the amino acid sequence D-Phe-Pro-BoroMpg [(R)-Phe-Pro-BoroMpg], which are highly specific inhibitors of thrombin. Of these compounds may be mentioned in particular Cbz-(R)-Phe-Pro-BoroMpg-OPinacol (also known as TRI 50b). The corresponding free boronic add is known as TRI 50c. For further information relating to TRI 50b and related compounds, the reader is referred to the following documents:

  • Elgendy S et al., in The Design of Synthetic Inhibitors of Thrombin, Claeson G et al Eds, Advances in Experimental Medicine, 340: 173-178, 1993.
  • Claeson G et al, Biochem J. 290: 309-312, 1993
  • Tapparelli C et al, J Biol Chem, 268: 4734-4741, 1993
  • Claeson G, in The Design of Synthetic Inhibitors of Thrombin, Claeson G et al Eds, Advances in Experimental Medicine, 340: 83-91, 1993
  • Phillip et al, in The Design of Synthetic Inhibitors of Thrombin, Claeson G et al Eds, Advances in Experimental Medicine, 340: 67-77, 1993
  • Tapparelli C et al, Trends Pharmacol. Sci. 14: 366-376, 1993
  • Claeson G, Blood Coagulation and Fibrinolysis 5: 411-436, 1994
  • Elgendy et al, Tetrahedron 50: 3803-3812, 1994
  • Deadman J et al, J. Enzyme Inhibition 9: 29-41, 1995
  • Deadman J et al, J. Medicinal Chemistry 38: 1511-1522, 1995.


The tripeptide sequence of TRI 50b has three chiral centres. The Phe residue is considered to be of (R)-configuration and the Pro residue of natural (S)-configuration, at least in compounds with commercially useful inhibitor activity; the Mpg residue is believed to be of (R)-configuration in isomers with commercially useful inhibitor activity. Thus, the active, or most active, TRI 50b stereoisomer is considered to be of R,S,R configuration and may be represented as:
embedded image


Whilst indirect acting thrombin inhibitors have been found useful parenterally for the treatment of patients susceptible to or suffering from venous thrombosis, the same is not true of arterial thrombosis, because it would be necessary to raise the dosage used in the treatment of venous thrombosis by many times in order to treat (prevent) arterial thrombosis. Such raised dosages typically cause bleeding, which makes indirect acting thrombin inhibitors unsuitable or less preferable for treating arterial thrombosis. Heparin and its low molecular weight derivatives are indirect thrombin inhibitors, and so are unsuitable to treat arterial thrombosis. Oral direct thrombin inhibitors are in development for arterial indications but may have lower than desirable therapeutic indices, i.e. may have higher than desirable levels of bleeding at therapeutic doses.


Many organoboronic acid compounds may be classified as lipophilic or hydrophobic. Typically, such compounds include amongst others:

    • boropeptides of which all or a majority of the amino acids are hydrophobic
    • boropeptides of which at least half of the amino acids are hydrophobic and which have a hydrophobic N-terminal substituent (amino protecting group)
    • non-peptides based on hydrophobic moieties.


GUIDE TO THE SPECIFICATION

This specification, as described in more detail below, concerns in particular various subject matters relating to novel compounds and compositions. For convenience, the term “Novel Products” is sometimes (but not always) used in the description to refer to products comprising these novel compounds and compositions; for example the term is used in headings.


The subject matters of the disclosure include synthetic methods devised in an earlier part of the research and development programme concerning the Novel Products, which methods generated one or more impurities and were otherwise not usable as such on an industrial scale. The term “Synthetic Methods I” is sometimes (but not always) used in the description to refer to such earlier methods; for example the term is used in headings. The subject matters relating to the Novel Products also include various aspects of subsequently devised synthetic techniques for making the novel compounds (or intermediates therefor) and relatively high purity products obtainable using these techniques; the term “Synthetic Methods II” is sometimes (but not always) used in the description to refer to such subsequent methods; for example the term is used in headings. At least in certain aspects, Synthetic Methods II represent a sub-set of Synthetic Methods I. The specific products of Synthetic Methods II are for convenience sometimes referred to as “High Purity Products”. The High Purity Products are a sub-set of the Novel Products.


The phrases Novel Products, Synthetic Methods I, Synthetic Methods II and High Purity Products are used solely for convenience and are not to be understood as limiting the scope of the invention, which includes the entire subject matter of the disclosure, including all materials, species, processes and uses thereof.


BRIEF SUMMARY OF THE DISCLOSURE

1. Novel Products


It has been discovered that TRI 50b tends to hydrolyse. Thus in acid conditions, for example of an HPLC assay, TRI 50b is converted to the acid form with a short half life, which implies potential hydrolysis in parenteral preparations containing water into species, comprising the free add and its corresponding boronate anions in equilibrium therewith, taught in the literature to be unstable to degradation via de-boronation (carbon-boron bond cleavage), by an oxidative pathway (see e.g. Wu et al, discussed above).


The instability of TRI 50b to hydrolysis also presents potential disadvantages in preparation of the compound and its formulation, as well as in the storage of pharmaceutical formulations containing it.


TRI 50c suffers further from instability, in that there is a problematic tendency for the boropeptide moiety itself to degrade via de-boronation (carbon-boron bond cleavage), such deboronation being taught by the literature to be oxidative (e.g. Wu et al, discussed above). The level of degradation can be remarkably high.


The properties discussed above of TRI 50b and TRI 50c will not be restricted to such compounds but will be shared by other boropeptide esters and acids, even if the properties of such other boropeptides differ quantitatively.


The present disclosure provides a solution to the problem of boronate diol ester and especially TRI50b instability which also provides the corresponding boronic acid with resistance to deboronation.


The present disclosure is predicated on, amongst other things, the finding that certain organoboronic acid products are indicated to be of enhanced stability.


The benefits of the present disclosure include a solution to the problem of boronate diol ester and especially TRI 50b instability, that is to say the presently disclosed products provide inter alia pharmacologically active compounds which are more stable than TRI 50b and other comparable esters in the sense of stability to hydrolysis. The disclosure further includes a solution to the problem of organoboronic acid instability, that is to say the presently disclosed products provide inter alia pharmacologically active compounds which are more stable to deboronation than TRI 50c. The stability provided within the framework of the disclosure is not absolute but is improved relative to the comparator compounds. The benefits offered by the disclosure further include the provision of products which have an unexpected usefulness in parenteral formulations.


There is disclosed an amino boronic acid derivative which avoids the disadvantages of pinacol esters. The disclosure further includes a peptide boronic acid derivative which is indicated to be of enhanced stability. In particular, the disclosure includes amongst other subject matter boronic add derivatives which are of relative stability to hydrolysis and deboronation and are useful in parenteral formulations for inhibiting thrombin.


The disclosure concerns a pharmaceutically acceptable base addition salt of certain organoboronic add drugs, specifically hydrophobic boropeptides (e.g. di- or tri-peptides), and more specifically thrombin inhibitors having a non-basic P1 group. As a class, such salts are not only contrary to the direction of the prior art but additionally have an improved level of stability which cannot be explained or predicted on the basis of known chemistry.


In one aspect, the disclosure relates to base addition salts of boronic acids which have a neutral aminoboronic acid residue capable of binding to the thrombin S1 subsite linked through a peptide linkage to a hydrophobic moiety capable of binding to the thrombin S2 and S3 subsites. In a first embodiment, there is disclosed a parenteral pharmaceutical formulation that includes a pharmaceutically acceptable base addition salt of a boronic acid of, for example, formula (I):
embedded image

wherein

  • Y comprises a hydrophobic moiety which, together with the aminoboronic acid residue —NHCH(R9)—B(OH)2, has affinity for the substrate binding site of thrombin; and
  • R9 is a straight chain alkyl group interrupted by one or more ether linkages (e.g. 1 or 2) and in which the total number of oxygen and carbon atoms is 3, 4, 5 or 6 (e.g. 5) or R9 is —(CH2)m—W where m is 2, 3, 4 or 5 (e.g. 4) and W is —OH or halogen (F, Cl, Br or I). R9 is an alkoxyalkyl group in one subset of compounds, e.g. alkoxyalkyl containing 4 carbon atoms.


Disclosed as certain examples are base addition salts of hydrophobic boronic acid inhibitors of thrombin. Such inhibitors may contain hydrophobic amino acids, and this class of amino acids includes those whose side chain is hydrocarbyl, hydrocarbyl containing an in-chain oxygen and/or linked to the remainder of the molecule by an in-chain oxygen or heteroaryl, or any of the aforesaid groups when substituted by hydroxy, halogen or trifluoromethyl. Representative hydrophobic side chains include alkyl, alkoxyalkyl, either of the aforesaid when substituted by at least one aryl or heteroaryl, aryl, heteroaryl, aryl substituted by at least one alkyl and heteroaryl substituted by at least one alkyl. Proline and other imino acids which are ring-substituted by nothing or by one of the moieties listed in the previous sentence are also hydrophobic.


Some hydrophobic side chains contain from 1 to 20 carbon atoms, e.g. non-cyclic moieties having 1, 2, 3 or 4 carbon atoms. Side chains comprising a cyclic group typically but not necessarily contain from 5 to 13 ring members and in many cases are phenyl or alkyl substituted by one or two phenyls.


Included are inhibitors which contain hydrophobic non-peptide moieties, which are typically based on moieties which may form a side chain of a hydrophobic amino acid, as described above.


Hydrophobic compounds may contain, for example, one amino group and/or one acid group (e.g. —COOH, —B(OH)2). Generally, they do not contain multiple polar groups of any one type.


The disclosure comprises base addition salts of hydrophobic boronic acid inhibitors of thrombin, and therefore includes such salts of peptide boronic acids which have a partition coefficient between 1-n-octanol and water expressed as log P of greater than 1.0 at physiological pH and 25° C. Some peptide boronic acids useful in the invention have a partition coefficient of at least 1.5. A class of hydrophobic peptide boronic acids useful in the invention has a partition coefficient of no more than 5.


Some sub-classes of hydrophobic organoboronic acids are those described by Formulae (I) and (III) below, under the heading “Detailed Description of Several Examples”.


Also disclosed as another embodiment is a pharmaceutically acceptable base addition salt of a peptide boronic acid of formula (II):
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where:

  • X is a moiety bonded to the N-terminal amino group and may be H to form NH2. The identity of X is not critical but may be a particular X moiety described above. In one example there may be mentioned benzyloxycarbonyl.


aa1 is an amino acid having a hydrocarbyl side chain containing no more than 20 carbon atoms (e.g. up to 15 and optionally up to 13 C atoms) and comprising at least one cyclic group having up to 13 carbon atoms. In certain examples, the cyclic group(s) of aa1 have/has 5 or 6 ring members. For instance, the cyclic group(s) of aa1 may be aryl groups, particularly phenyl. Typically, there are one or two cyclic groups in the aa1 side chain. Certain side chains comprise, or consist of, methyl substituted by one or two 5- or 6-membered rings.


More particularly, aa1 is Phe, Dpa or a wholly or partially hydrogenated analogue thereof. The wholly hydrogenated analogues are Cha and Dcha.


aa2 is an imino acid having from 4 to 6 ring members. Alternatively, aa2 is Gly N-substituted by a C3-C13 hydrocarbyl group, e.g. a C3-C8 hydrocarbyl group comprising a C3-C6 hydrocarbyl ring; the hydrocarbyl group may be saturated, for example exemplary N-substituents are cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl. As a hydrocarbyl group containing one or more unsaturated bonds may be mentioned phenyl and methyl or ethyl substituted by phenyl, e.g. 2-phenylethyl, as well as β,β-dialkylphenylethyl.


There is a debate in the literature as to whether boronates in aqueous solution form the ‘trigonal’ B(OH)2 or ‘tetrahedral’ B(OH)3 boron species, but NMR evidence seems to indicate that at a pH below the first pKa of the boronic acid the main boron species is the neutral B(OH)2. In the duodenum the pH is likely to be between 6 and 7, so the trigonal species is likely to be predominant here. In any event, the symbol —B(OH)2 includes tetrahedral as well as trigonal boron species, and throughout this specification symbols indicating trigonal boron species embrace also tetrahedral species. The symbol may further include boronic groups in anhydride form.


The salts may be in the form of solvates, particularly hydrates.


The salts may comprise, or consist essentially of, acid salts in which the boronic acid is singly deprotonated. The disclosure therefore includes products having a metal/boronate stoichiometry consistent with the boronate groups in the product predominantly (more than 50 mol %) carrying a single negative charge.


The salts may be in isolated form. The salts may have a purity, e.g. as determined by the method of Example 34, of at least about 90%, e.g. of greater than or equal to about 95%. In the case of pharmaceutical formulations, such salt forms may be combined with pharmaceutically acceptable diluents, excipients or carriers.


Parenteral formulations of the salts are also provided herein. In particular, there are provided parenteral formulations comprising the salts in the solid phase, for example particulate salts for reconstitution as aqueous solutions prior to administration by injection or infusion. Such reconstituted solutions are also included in the disclosure.


According to a further aspect of the present disclosure, there is provided a method of treatment of a condition where anti-thrombotic activity is required which method comprises parenteral administration of a therapeutically effective amount of a pharmaceutically acceptable base addition salt of a boronic add of formula (I) to a person suffering from, or at risk of suffering from, such a condition.


The disclosure includes subject matter relating to Synthetic Methods I, including a method for preparing the salts from the corresponding boronic acid as an intermediate, as well as the intermediate boronic acid of Formula (I) and a method for preparing it.


An aspect of the disclosure resides in a class of tripeptide boronates useful for making salts described herein and having (R,S,R) stereochemistry. Accordingly, there is provided an isolated compound selected from boronic acids of formula (IIIa):
embedded image

where:

  • X is H (to form NH2) or an amino-protecting group;
  • aa1 is an amino acid having a hydrocarbyl side chain containing no more than 20 carbon atoms and comprising at least one cyclic group having up to 13 carbon atoms;
  • aa2 is an imino acid having from 4 to 6 ring members;
  • R9 is a straight chain alkyl group interrupted by one or more ether linkages and in which the total number of oxygen and carbon atoms is 3, 4, 5 or 6 or R9 is —(CH2)m—W where m is from 2, 3, 4 or 5 and W is —OH or halogen (F, Cl, Br or I).


A further aspect resides in a process for making a pharmaceutically acceptable base addition salt of an organoboronic acid inhibitor of thrombin having a neutral thrombin S1-binding moiety linked through a peptide linkage to a hydrophobic thrombin 52/53-binding moiety, comprising combining a solution of the organoboronic add in a water-miscible organic solvent with an aqueous solution or suspension of the base, causing or allowing the acid and the base to react, and recovering the salt.


Additionally included is a solution whose solvent is a water-miscible organic solvent and which contains species selected from an organoboronic add inhibitor of thrombin having a neutral thrombin S1-binding moiety linked through a peptide linkage to a hydrophobic thrombin S2/S3-binding moiety, and equilibrium forms of the organoboronic acid, the term “equilibrium foms” meaning differing forms of the same organoboronic acid which may be represented in an equilibrium equation (as in the organoboronic acid in equilibrium with an organoboronic anhydride and in equilibrium with different organoboronate ions).


2. Synthetic Methods II


TRI 50c salts are obtained via TRI 50c esters. However, published synthetic routes to TRI 50c esters and thus to TRI 50c give rise to one or more impurities. Synthetic Methods I (unpublished as of filing this application) for making the salts give rise to one or more impurities and very high purity salts were not obtained. Further, the salts have proved most challenging to obtain in high purity. Thus, purification techniques which were applied failed to produce very high purity salts. HPLC will not be usable on an industrial scale to purify salts made via published TRI 50c ester syntheses and the salt preparation techniques of Synthetic Methods I. In other words, in order for the therapeutic benefits of TRI 50c salts to be provided to those in need thereof, the salts must be obtainable industrially in adequately pure form and the pure form must be attainable without the use of excessively expensive purification techniques.


The disclosure provides techniques for purifying organoboronic compounds and techniques for helping to maintain the purity of organoboronic compounds, and the products of such techniques. The present disclosure further provides a method of making such high purity salts and the high purity salts themselves. In particular, disclosed herein in one embodiment is a method comprising a chirally-selective precipitation step which results in a precipitated boronic acid derivative of high purity. Further provided is a method for hydrolysing organoboronate that can be used to help obtain high purity salts. In another embodiment, there is disclosed a method for preparing the salts described in the previous paragraph in high purity and wherein selected solvents are used to help achieve high purity levels.


In another aspect there is provided a novel synthesis useful in the preparation of the TRI 50c boropeptide and other compounds; also provided are aminoboronates and boropeptides obtainable indirectly from the synthesis.


There are further provided boronic add salts of specified purity and pharmaceutical formulations containing them.


In one aspect, the disclosure provides the use of diethanolamine to resolve by precipitation boronic add compounds (whether provided as the acid or, for example, an ester), wherein the add is of the formula X-(R)-aa1-(S)-aa2-NH—C*(R1)H—B(OH)2, where aa1, aa2 and R1 are as described below and C* is a chiral centre present initially in both chiralities. The disclosure further provides a method of resolving the chiral isomers, in which the diethanolamine is used in an amount of 1.25±0.1 equivalents per equivalent of the boronic acid compound having chiral centre C* in (R)-configuration.


Another aspect of the disclosure relates to the protection of organoboronic compounds from degradation by C—B bond cleavage, using a technique not designed to be protective against the previously known oxidative mechanism of C—B bond cleavage. The method comprises the aqueous hydrolysis of a boronic compound, e.g. boronic ester, for a period sufficiently short substantially to avoid cleavage of the C—B bond. By way of example, a period of no more than about 30 minutes at about room temperature may be mentioned.


Further included is the use of acetonitrile as a solvent in the preparation of organoboronate salts. In particular, an organoboronic acid is dissolved in acetonitrile and contacted with a base to form the corresponding organoboronate salt. A solid organoboronate salt containing water may be dried by azeodrying using acetonitrile.


Also provided is a process for separating diastereomers of a boronic acid of formula (XX):
embedded image

    • where:
    • X is H (to form NH2) or an amino-protecting group;
    • aa1 is an amino acid residue of (R) configuration selected from Phe, Dpa and wholly or partially hydrogenated analogues thereof;
    • aa2 is an imino acid residue of (S) configuration having from 4 to 6 ring members;
    • R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen (F, Cl, Br or I),
    • and where C* is a chiral centre,


      the process comprising:
    • combining (A) a starting solution in diethylether of a boronic species selected from the boronic acid (I) and its esters with alcohols selected from alcohols in which the sole potential electron donor heteroatoms are oxygens which, in the boronic ester, correspond to the oxygens of the ester functional group, the starting solution containing both boronic species having a chiral centre C* of (R) configuration and boronic species having a chiral centre C* of (S) configuration; and (B) diethanolamine, the diethanolamine being in an amount of 1.25±0.1 equivalents based on the boronic species in which chiral centre C* is of (R) configuration, and mixing to form a mixture;
    • causing or allowing the boronic species and the diethanolamine to react until a precipitate forms; and
    • recovering the precipitate.


The precipitation step is selective for species having a chiral centre C* of (R) configuration, which are recovered in high purity.


The process may comprise converting the recovered precipitate to the acid of formula (I) by dissolving the precipitate in an organic solvent selected from halohydrocarbons and combinations thereof, agitating the resulting solution with an aqueous medium, for example an aqueous acid having a pH of below 3, whereby the dissolved precipitate is converted to the formula (I) acid, and recovering the formula (I) acid by evaporation.


One process of the disclosure comprises hydrolysing, e.g. allowing the hydrolysis of, a diethanolamine ester of an acid of formula (I) with an aqueous medium for a time sufficiently short for the product acid to be substantially free of impurity resulting from carbon-boron bond cleavage.


One class of processes further comprises converting the recovered acid of formula (I) to a pharmaceutically acceptable base addition salt thereof by dissolving the acid in acetonitrile, combining the resultant solution with an aqueous solution or suspension of a pharmaceutically acceptable base, and causing or allowing the base and the add to react, then evaporating to dryness to obtain an evaporation residue.


The base addition salt may thereafter be incorporated in a pharmaceutical formulation.


The invention further includes a process for making a boronic add of Formula (I) in which R1 is of the formula —(CH2)s—O—R3 wherein R3 is methyl or ethyl and s is independently 2, 3 or 4, or for making a synthetic intermediate for such an add, the process comprising:

    • reacting a 1-metalloalkoxyalkane, where the alkoxyalkane is of the formula —(CH2)s—O—R3, and a borate ester to form a compound of Formula (VI):

      (HO)2B—(CH2)s—O—R3  (VI),

      the process optionally further comprising converting the compound of Formula (VI) into an acid of formula (I), for example by a known process.


In one class of processes, the compound of Formula (VI) is converted into an ester of the Formula (I) acid, which ester is transesterified with diethanolamine to form a precipitate. The precipitate may then be recovered for further processing. Suitably, the diethanolamine transesterification is used for resolving chiral isomers, as described herein. The resolved active R,S,R isomer may then be converted from the diethanolamine ester to the free acid, for example as described herein, and the free acid may if desired be converted to a salt, for example as described herein.


The disclosure includes the products of the aforesaid processes. Further products are described and claimed in the following specification.


The Synthetic Methods II and products thereof may be performed or, as the case may be, provided on mass or commercial scale.


3. General


The salts described herein include products obtainable by (having the characteristics of a product obtained by) reaction of the boronic acid with a strong base and the term “salt” herein is to be understood accordingly. The term “salt” in relation to the disclosed products, therefore, does not necessarily imply that the products contain discrete cations and anions and is to be understood as embracing products which are obtainable using a reaction of a boronic acid and a base. The disclosure embraces products which, to a greater or lesser extent, are in the form of a coordination compound. The disclosure thus provides also products obtainable by (having the characteristics of a product obtained by) reaction of a boronic acid (I) with a strong base a well as the therapeutic, including prophylactic, use of such products.


The present disclosure is not limited as to the method of preparation of the salts, provided that they contain a boronate species derived from boronic acid (I) and a counter-ion. Such boronate species may be boronate anions in any equilibrium form thereof. The term “equilibrium form” refers to differing forms of the same compounds which may be represented in an equilibrium equation (e.g. boronic acid in equilibrium with a boronic anhydride and in equilibrium with different boronate ions). Boronates in the solid phase may form anhydrides and the disclosed boronate salts when in the solid phase may comprise boronate anhydrides, as a boronic equilibrium species. It is not required that the salts be prepared by reaction of a base containing the counter-ion and the boronic add (I). Further, the disclosure includes salt products which might be regarded as indirectly prepared by such an acid/base reaction as well as salts obtainable by (having the characteristics of products obtained by) such indirect preparation. As examples of possibly indirect preparation may be mentioned processes in which, after initial recovery of the salt, it is purified and/or treated to modify its physicochemical properties, for example to modify solid form or hydrate form, or both.


In some embodiments, the cations of the salts are monovalent.


In some embodiments the salts comprise anhydride species; in others they are essentially free of anhydride species.


Further aspects and embodiments of the disclosure are set forth in the following description and claims. Also included as such are the salts described herein.


Throughout the description and claims of this specification, the words “comprise” and “contain” and variations of the words, for example “comprising” and “comprises”, mean “including but not limited to”, and are not intended to (and do not) exclude other moieties, additives, components, integers or steps.


This patent application contains data indicating that the stability (resistance to deboronation) of organoboronic acids may be increased by providing them in the form of salts, e.g. metal salts. In single experiments, the ammonium salt of TRI 50c appeared to decompose on drying to yield ammonia, whilst the choline salt demonstrated rapid decomposition to a deboronated impurity. Although experiments have not been conducted to reproduce these unrepeated observations, there is provided a sub-class in which the ammonium and choline salts are excluded. The salt may be an acid salt. In any event, this stabilisation technique forms part of the disclosure and is applicable, inter alia, to organoboronic acids described under the heading “BACKGROUND” and to organoboronic adds described in publications mentioned under that heading.




BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1 is a chart referred to in Example 35, showing the results of a thrombin amidolytic assay of TRI 1405 (TRI 50c magnesium salt) and TRI 50b, where Vmax is the maximum rate of reaction measured by amidolytic assay.



FIG. 2 is a plot referred to in Example 39, showing intravenous phase clearance and kinetics following a single dose of TRI 50b or TRI 50c.




DETAILED DESCRIPTION OF SEVERAL EXAMPLES

Glossary


The following terms and abbreviations are used in this specification:


The expression “acid salt” as applied to a salt of a boronic acid refers to salts of which a single —OH group of the trigonally-represented acid group —B(OH)2 is deprotonated. Thus salts wherein the boronate group carries a single negative charge and may be represented as —B(OH)(O—) or as [—B(OH)3] are acid salts. The expression encompasses salts of a cation having a valency n wherein the molar ratio of boronic acid to cation is approximately n to 1. In practical terms, the observed stoichiometry is unlikely to be exactly n:1 but will be consistent with a notional n:1 stoichiometry. For example, the observed mass of the cation might vary from the calculated mass for a n:1 stoichiometry by no more than about 10%, e.g. no more than about 7.5%; in some cases an observed mass of a cation might vary from the calculated mass by no more than about 1%. Calculated masses are suitably based on the trigonal form of the boronate. (At an atomic level, a salt stoichiometrically consistent with being an acid salt might contain boronates in a mix of protonation states, whose average approximates to single deprotonation and such “mixed” salts are included in the term “acid salt”). Examples of acid salts are monosodium salts and hemicalcium salts.


α-Aminoboronic acid or Boro(aa) refers to an amino acid in which the CO2 group has been replaced by BO2.


The term “amino-group protecting moiety” refers to any group used to derivatise an amino group, especially an N-terminal amino group of a peptide or amino acid. Such groups include, without limitation, alkyl, acyl, alkoxycarbonyl, aminocarbonyl, and sulfonyl moieties. However, the term “amino-group protecting moiety” is not intended to be limited to those particular protecting groups that are commonly employed in organic synthesis, nor is it intended to be limited to groups that are readily cleavable.


The term “equilibrium form” refers to differing forms of the same compounds which may be represented in an equilibrium equation, as in the case of a boronic add in equilibrium with a boronic anhydride and/or in equilibrium with one or more different boronate ions or as in the case of an organic base in equilibrium with a protonated form thereof.


The phrase “pharmaceutically acceptable” is employed herein to refer to those compounds, materials, compositions, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings or animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio.


The expression “thrombin inhibitor” refers to a product which, within the scope of sound pharmacological judgement, is potentially or actually pharmaceutically useful as an inhibitor of thrombin, and includes reference to substance which comprises a pharmaceutically active species and is described, promoted or authorised as a thrombin inhibitor. Such thrombin inhibitors may be selective, that is they are regarded, within the scope of sound pharmacological judgement, as selective towards thrombin in contrast to other proteases; the term “selective thrombin inhibitor” includes reference to substance which comprises a pharmaceutically active species and is described, promoted or authorised as a selective thrombin inhibitor.


The term “heteroaryl” refers to a ring system which has at least one (e.g. 1, 2 or 3) in-ring heteroatoms and has a conjugated in-ring double bond system. The term “heteroatom” includes oxygen, sulfur and nitrogen, of which sulfur is sometimes less preferred.


“Natural amino acid” means an L-amino acid (or residue thereof) selected from the following group of neutral (hydrophobic or polar), positively charged and negatively charged amino acids:


Hydrophobic Amino Acids

    • A=Ala=alanine
    • V=Val=valine
    • I=Ile=isoleucine
    • L=Leu=leucine
    • M=Met=methionine
    • F=Phe=phenylalanine
    • P=Pro=proline
    • W=Trp=tryptophan


Polar (Neutral or Uncharged) Amino Adds

    • N=Asn=asparagine
    • C=Cys=cysteine
    • Q=Gln=glutamine
    • G=Gly=glycine
    • S=Ser=serine
    • T=Thr=threonine
    • Y=Tyr=tyrosine


Positively Charged (Basic) Amino Acids

    • R=Arg=arginine
    • H=His=histidine
    • K=Lys=lysine


Negatively Charged Amino Acids

    • D=Asp=aspartic acid
    • E=Glu=glutamic acid.
  • ACN=acetonitrile
  • Amino acid=α-amino acid
  • Base addition salt=a salt which is prepared from addition of an inorganic base or an organic base to a free acid (in this case the boronic acid).
  • Cbz=benzyloxycarbonyl
  • Cha=cyclohexylalanine (a hydrophobic unnatural amino acid)
  • Charged (as applied to drugs or fragments of drug molecules, e.g. amino acid residues)=carrying a charge at physiological pH, as in the case of an amino, amidino or carboxy group
  • Dcha=dicyclohexylalanine (a hydrophobic unnatural amino acid)
  • Dpa=diphenylalanine (a hydrophobic unnatural amino acid)
  • Drug=a pharmaceutically useful substance, whether the active in vivo principle or a prodrug i.v.=intravenous
  • Mpg=3-methoxypropylglycine (a hydrophobic unnatural amino acid)
  • Multivalent=valency of at least two, for example two or three
  • Neutral (as applied to drugs or fragments of drug molecules, e.g. amino add residues)=uncharged=not carrying a charge at physiological pH
  • Pinac=Pinacol=2,3-dimethyl-2,3-butanediol
  • Pinanediol=2,3-pinanediol=2,6,6-trimethylbicyclo [3.1.1]heptane-2,3-diol
  • Pip=pipecolinic acid
  • Room temperature=25° C.±2° C.
  • s.c.=subcutaneous
  • Strong base=a base having a sufficiently high pKb to react with a boronic add. Suitably such bases have a pKb of 7 or more, e.g. 7.5 or more, for example about 8 or more
  • THF=tetrahydrofuran
  • Thr=thrombin


    Novel Products—The Compounds


The products of the disclosure comprise salts of boronic acids which have a neutral aminoboronic add residue capable of binding to the thrombin S1 subsite linked through a peptide linkage to a hydrophobic moiety capable of binding to the thrombin S2 and S3 subsites. The disclosure includes salts of acids of formula (I):
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wherein

  • Y comprises a hydrophobic moiety which, together with the aminoboronic acid residue —NHCH(R9)—B(OH)2, has affinity for the substrate binding site of thrombin; and
  • R9 is a straight chain alkyl group interrupted by one or more ether linkages and in which the total number of oxygen and carbon atoms is 3, 4, 5 or 6 (e.g. 5) or R9 is —(CH2)m—W where m is from 2, 3, 4 or 5 (e.g. 4) and W is —OH or halogen (F, Cl, Br or I). As examples of straight chain alkyl interrupted by one or more ether linkages (—O—) may be mentioned alkoxyalkyl (one interruption) and alkoxyalkoxyalkyl (two interruptions). R9 is an alkoxyalkyl group in one subset of compounds, e.g. alkoxyalkyl containing 4 carbon atoms.


Typically, YCO— comprises an amino acid residue (whether natural or unnatural) which binds to the S2 subsite of thrombin, the amino acid residue being N-terminally linked to a moiety which binds the S3 subsite of thrombin.


In one class of Formula (I) acids, YCO— is an optionally N-terminally protected dipeptide residue which binds to the S3 and S2 binding sites of thrombin and the peptide linkages in the acid are optionally and independently N-substituted by a C1-C13 hydrocarbyl group optionally containing in-chain and/or in-ring nitrogen, oxygen or sulfur and optionally substituted by a substituent selected from halo, hydroxy and trifluoromethyl. The N-terminal protecting group, when present, may be a group X as defined above (other than hydrogen). Normally, the acid contains no N-substituted peptide linkages; where there is an N-substituted peptide linkage, the substituent is often 1C to 6C hydrocarbyl, e.g. saturated hydrocarbyl; the N-substituent comprises a ring in some embodiments, e.g. cycloalkyl, and may be cyclopentyl, for example. One class of adds has an N-terminal protecting group (e.g. an X group) and unsubstituted peptide linkages.


Where YCO— is a dipeptide residue (whether or not N-terminally protected), the S3-binding amino acid residue may be of R configuration and/or the S2-binding residue may of S configuration. The fragment —NHCH(R9)—B(OH) may of R configuration. The disclosure is not restricted to chiral centres of these conformations, however.


In one class of compounds, the side chain of P3 (S3-binding) amino acid and/or the P2 (S2-binding) amino acid is a moiety other than hydrogen selected from a group of formula A or B:

—(CO)a—(CH2)b-Dc-(CH2)d-E  (A)
—(CO)a—(CH2)b-Dc-Ce(E1)(E2)(E3)  (B)

wherein

  • a is 0 or 1;
  • e is 1;
  • b and d are independently 0 or an integer such that (b+d) is from 0 to 4 or, as the case may be, (b+e) is from 1 to 4;
  • c is 0 or 1;
  • D is O or S;
  • E is H, C1-C6 alkyl, or a saturated or unsaturated cyclic group which normally contains up to 14 members and particularly is a 5-6 membered ring (e.g. phenyl) or an 8-14 membered fused ring system (e.g. naphthyl), which alkyl or cyclic group is optionally substituted by up to 3 groups (e.g. 1 group) independently selected from C1-C6 trialkylsilyl, —CN, —R13, —R12OR13, —R12COR13, —R12CO2R13 and —R12O2CR13, wherein R12 is —(CH2)f— and R13 is —(CH2)gH or by a moiety whose non-hydrogen atoms consist of carbon atoms and in-ring heteroatoms and number from 5 to 14 and which contains a ring system (e.g. an aryl group) and optionally an alkyl and/or alkylene group, wherein f and g are each independently from 0 to 10, g particularly being at least 1 (although —OH may also be mentioned as a substituent), provided that (f+g) does not exceed 10, more particularly does not exceed 6 and most particularly is 1, 2, 3 or 4, and provided that there is only a single substituent if the substituent is a said moiety containing a ring system, or E is C1-C6 trialkylsilyl; and E1, E2 and E3 are each independently selected from —R15 and -J-R15, where J is a 5-6 membered ring and R15 is selected from C1-C6 trialkylsilyl, —CN, —R13, —R12OR13, —R12COR13, —R12CO2R13, —R12O2CR13, and one or two halogens (e.g. in the latter case to form a -J-R15 moiety which is dichlorophenyl), where R12 and R13 are, respectively, an R12 moiety and an R13 moiety as defined above (in some acids where E1, E2 and E3 contain an R13 group, g is 0 or 1);
  • in which moiety of Formula (A) or (B) any ring is carbocyclic or aromatic, or both, and any one or more hydrogen atoms bonded to a carbon atom is optionally replaced by halogen, especially F.


In certain examples, a is 0. If a is 1, c may be 0. In particular examples, (a+b+c+d) and (a+b+c+e) are no more than 4 and are more especially 1, 2 or 3. (a+b+c+d) may be 0.


Exemplary groups for E, E1, E2 and E3 include aromatic rings such as phenyl, naphthyl, pyridyl, quinolinyl and furanyl, for example; non-aromatic unsaturated rings, for example cyclohexenyl; saturated rings such as cyclohexyl, for example. E may be a fused ring system containing both aromatic and non-aromatic rings, for example fluorenyl. One class of E, E1, E2 and E3 groups are aromatic (including heteroaromatic) rings, especially 6-membered aromatic rings. In some compounds, E1 is H whilst E2 and E3 are not H; in those compounds, examples of E2 and E3 groups are phenyl (substituted or unsubstituted) and C1-C4 alkyl, e.g. methyl.


In one class of embodiments, E contains a substituent which is C1-C6 alkyl, (C1-C5 alkyl)carbonyl, carboxy C1-C5 alkyl, aryl (including heteroaryl), especially 5-membered or preferably 6-membered aryl (e.g. phenyl or pyridyl), or arylalkyl (e.g. arylmethyl or arylethyl where aryl may be heterocyclic and is preferably 6-membered).


In another class of embodiments, E contains a substituent which is OR13, wherein R13 can be a 6-membered ring, which may be aromatic (e.g. phenyl) or is alkyl (e.g. methyl or ethyl) substituted by such a 6-membered ring.


A class of moieties of formula A or B are those in which E is a 6-membered aromatic ring optionally substituted, particularly at the 2-position or 4-position, by —R13 or —OR13.


The disclosure includes salts in which the P3 and/or P2 side chain comprises a cyclic group in which 1 or 2 hydrogens have been replaced by halogen, e.g. F or Cl.


The disclosure includes a class of salts in which the side chains of formula (A) or (B) are of the following formulae (C), (D) or (E):
embedded image

wherein q is from 0 to 5, e.g. is 0, 1 or 2, and each T is independently hydrogen, one or two halogens (e.g. F or Cl), —SiMe3, —CN, —R13, —OR13, —COR13, —CO2R13 or —O2CR13. In some embodiments of structures (D) and (E), T is at the 4-position of the phenyl group(s) and is —R13, —OR13, —COR13, —CO2R13 or —O2CR13, and R13 is C1-C10 alkyl and more particularly C1-C6 alkyl.


In one sub-class, T is —R13 or —OR13, for example in which f and g are each independently 0, 1, 2 or 3; in some side chains groups of this sub-class, T is —R12OR13 and R13 is H.


In one class of the moieties, the side chain is of formula (C) and each T is independently R13 or OR13 and R13 is C1-C4 alkyl. In some of these compounds, R13 is branched alkyl and in others it is straight chain. In some moieties, the number of carbon atoms is from 1 to 4.


In many dipeptide fragments YCO— (which dipeptides may be N-terminally protected or not), the P3 amino acid has a side chain of formula (A) or (B) as described above and the P2 residue is of an imino acid.


The disclosure therefore includes medicaments comprising salts, e.g. metal salts, of organoboronic acids which are thrombin inhibitors, particularly selective thrombin inhibitors, having a neutral P1 (S1-binding) moiety. For more information about moieties which bind to the S3, S2 and S1 sites of thrombin, see for example Tapparelli C et al, Trends Pharmacol. Sci. 14: 366-376, 1993; Sanderson P et al, Current Medicinal Chemistry, 5: 289-304, 1998; Rewinkel J et al, Current Pharmaceutical Design, 5: 1043-1075, 1999; and Coburn C Exp. Opin. Ther. Patents 11(5): 721-738, 2001. The thrombin inhibitory salts of the disclosure are not limited to those having S3, S2 and S1 affinity groups described in the publications listed in the preceding sentence.


The boronic acids may have a Ki for thrombin of about 100 nM or less, e.g. about 20 nM or less.


A subset of the Formula (I) acids comprises the acids of Formula (III):
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X is a moiety bonded to the N-terminal amino group and may be H to form NH2. The identity of X is not critical but may be a particular X moiety described above. In one example there may be mentioned benzyloxycarbonyl.


In certain examples X is R6—(CH2)p—C(O)—, R6—(CH2)P—S(O)2—, R6—(CH2)p—NH—C(O)— or R6—(CH2)p—O—C(O)— wherein p is 0, 1, 2, 3, 4, 5 or 6 (of which 0 and 1 are preferred) and R6 is H or a 5 to 13-membered cyclic group optionally substituted by 1, 2 or 3 substituents selected from halogen, amino, nitro, hydroxy, a C5-C6 cyclic group, C1-C4 alkyl and C1-C4 alkyl containing, and/or linked to the 5 to 13-membered cyclic group through, an in-chain O, the aforesaid alkyl groups optionally being substituted by a substituent selected from halogen, amino, nitro, hydroxy and a C5-C6 cyclic group. More particularly X is R6—(CH2)p—C(O)— or R6—(CH2)p—O—C(O)— and p is 0 or 1. Said 5 to 13-membered cyclic group is often aromatic or heteroaromatic, for example is a 6-membered aromatic or heteroaromatic group. In many cases, the group is not substituted.


Exemplary X groups are (2-pyrazine)carbonyl, (2-pyrazine)sulfonyl and particularly benzyloxycarbonyl.


aa1 is an amino acid residue having a hydrocarbyl side chain containing no more than 20 carbon atoms (e.g. up to 15 and optionally up to 13 C atoms) and comprising at least one cyclic group having up to 13 carbon atoms. In certain examples, the cyclic group(s) of aa1 have/has 5 or 6 ring members. For instance, the cyclic group(s) of aa1 may be aryl groups, particularly phenyl. Typically, there are one or two cyclic groups in the aa1 side chain. Certain side chains comprise, or consist of, methyl substituted by one or two 5- or 6-membered rings.


More particularly, aa1 is Phe, Dpa or a wholly or partially hydrogenated analogue thereof. The wholly hydrogenated analogues are Cha and Dcha.


aa2 is an imino acid residue having from 4 to 6 ring members. Alternatively, aa2 is Gly N-substituted by a C3-C13 hydrocarbyl group, e.g. a C3-C8 hydrocarbyl group comprising a C3-C6 hydrocarbyl ring; the hydrocarbyl group may be saturated, for example exemplary N-substituents are cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl. As a hydrocarbyl group containing one or more unsaturated bonds may be mentioned phenyl and methyl or ethyl substituted by phenyl, e.g. 2-phenylethyl, as well as β,β-dialkylphenylethyl.


An exemplary class of products comprises those in which aa2 is a residue of an imino acid of formula (IV)
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where R11 is —CH2—, CH2—CH2—, —S—CH2— or —CH2—CH2—CH2—, which group when the ring is 5 or 6-membered is optionally substituted at one or more —CH2— groups by from 1 to 3 C1-C3 alkyl groups, for example to form the R11 group —S—C(CH3)2—. Of these imino acids, azetidine-2-carboxylic acid, especially (s)-azetidine-2-carboxylic acid, and more particularly proline are illustrative.


It will be appreciated from the above that a very preferred class of products consists of those in which aa1-aa2 is Phe-Pro. In another preferred class, aa1-aa2 is Dpa-Pro. In other products, aa1-aa2 is Cha-Pro or Dcha-Pro. Of course, also included are corresponding product classes in which Pro is replaced by (s)-azetidine-2-carboxylic acid.


R9 is as defined previously and may be a moiety R1 of the formula —(CH2)s-Z. Integer s is 2, 3 or 4 and W is —OH, —OMe, —OEt or halogen (F, Cl, I or, preferably, Br). Particularly illustrative Z groups are —OMe and —OEt, especially —OMe. In certain examples s is 3 for all Z groups and, indeed, for all compounds of the disclosure. Particular R1 groups are 2-bromoethyl, 2-chloroethyl, 2-methoxyethyl, 4-bromobutyl, 4-chlorobutyl, 4-methoxybutyl and, especially, 3-bromopropyl, 3-chloropropyl and 3-methoxypropyl. Most preferably, R1 is 3-methoxypropyl. 2-Ethoxyethyl is another preferred R1 group.


Accordingly, a specific class of salts consists of those of acids of the formula X-Phe-Pro-Mpg-B(OH)2, especially Cbz-Phe-Pro-Mpg-B(OH)2; also included are analogues of these compounds in which Mpg is replaced by a residue with another of the R1 groups and/or Phe is replaced by Dpa or another aa1 residue.


The aa1 moiety of the salt is preferably of R configuration. The aa2 moiety is preferably of (S)-configuration. Particularly preferred salts have aa1 of (R)-configuration and aa2 of (S)-configuration. The chiral centre —NH—CH(R1)—B— is preferably of (R)-configuration. It is considered that commercial formulations will have the chiral centres in (R,S,R) arrangement, as for example in the case of salts of Cbz-Phe-Pro-BoroMpg-OH:
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The disclosure includes salts of Cbz-(R)-Phe-(S)-Pro-(R)-boroMpg-OH (and of other compounds of the formula X-(R)-Phe-(S)-Pro-(R)-boroMpg-OH) which are at least 90% pure, e.g. at least 95% pure.


In broad terms, the salts described herein may be considered to correspond to reaction products of an organoboronic acid as described above with a strong base, e.g. a basic metal compound; the salts are however not limited to products resulting from such a reaction and may be obtained by alternative routes.


The salts are therefore obtainable by contacting an add of formula (I) with a strong base. The disclosure thus contemplates products (compositions of matter) having the characteristics of a reaction product of an acid of formula (I) and a strong base. The base is pharmaceutically acceptable.


As suitable salts may be mentioned salts of metals, e.g. of monovalent or divalent metals, and stronger organic bases, for example:

  • 1. Alkali metal salts;
  • 2. Divalent, e.g. alkaline earth metal, salts;
  • 3. Group III metals;
  • 4. Salts of strongly basic organic nitrogen-containing compounds, including:
    • 4A. Salts of guanidines and their analogues;
    • 4B. Salts of strongly basic amine, examples of which include (i) aminosugars and (ii) other amines.


Of the above salts, particularly illustrative are alkali metals, especially Na and Li. Also illustrative are aminosugars.


Specific salts are of the acid boronate though in practice the acid salts may contain a very small proportion of the doubly deprotonated boronate. The term “acid boronate” refers to trigonal —B(OH)2 groups in which one of the B—OH groups is deprotonated as well as to corresponding tetrahedral groups in equilibrium therewith. Acid boronates have a stoichiometry consistent with single deprotonation.


The disclosure includes therefore products (compositions of matter) which comprise salts which may be represented by formula (V):
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where Yn+ is a pharmaceutically acceptable cation obtainable from a strong base, and aa1, aa1, X and R1 are as defined above. Also included are products in which R1 is replaced by another R9 group.


One class of salts have a solubility of about 10 mM or more, e.g. of at least about 20 mM, when their solubility is determined as described in the examples at a dissolution of 25 mg/ml. More particularly yet they have a solubility of least 50 mM when their solubility is determined as described in the examples at a dissolution of 50 mg/ml.


The disclosure includes salts of boronic acids (I) having an observed stoichiometry consistent with the salt being of (being representable by) the formula “(boronate)ncationn+”. One class of such salts are represented by the formula:

[Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)(O)]M+

where M+ represents a monovalent cation, especially an alkali metal cation. It will be understood that the above representation is a notional representation of a product whose observed stoichiometry is unlikely to be literally and exactly 1:1. In any event, a particular salt is Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 monosodium salt (TGN 255). In the above formula, the trigonally-represented boronate represents, as always, boronates which are trigonal, tetrahedral or mixed trigonal/tetrahedral.


Particularly exemplary are products which comprise:

  • (i) species selected from (a) acids of formula (VIII): X-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 where X is H or an amino-protecting group, especially Cbz, (b) boronate anions thereof, and (c) any equilibrium form of the aforegoing (e.g. an anhydride); and
  • (ii) ions having a valency n in combination with said species, the species and said ions having an observed stoichiometry consistent with a notional species:ion stoichiometry of n:1. In one class of salts, n is 1.


Considering the counter-ions in turn:


1. Monovalent Metal, Especially Alkali Metal Salts


Suitable alkali metals include lithium, sodium and potassium. All of these are remarkably soluble. Lithium and sodium are illustrative because of their high solubility. The lithium and particularly sodium salts are of surprisingly high solubility in relation to potassium amongst others. Sodium is most used in many instances. Salts containing mixtures of alkali metals are contemplated by the disclosure.


The disclosure includes products comprising salts of the formula (VI)
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where M+ is an alkali metal ion and aa1, aa2, X and R1 are as defined above, as well as salts in which both hydroxy groups of the boronate group are in salt form (preferably with another identical M+ group) and mixtures of such salts. Included also are products wherein R1 is replaced by another R9 group.


2. Divalent, e.g. Alkaline Earth Metal (Group II Metal) Salts


One example of a divalent metal is calcium. Another suitable divalent metal is magnesium. Also contemplated is zinc. The divalent metals are usually used in a boronic acid:metal ratio of substantially 2:1, in order to achieve the preferred monovalent boronate moiety. Salts containing mixtures of divalent metals, e.g. mixtures of alkaline earth metals, are also contemplated.


Further disclosed are products (compositions of matter) which comprise salts which may be represented by the formula (VII):
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where M2+ is a divalent metal cation, e.g. an alkaline earth metal or zinc cation, and aa1, aa2′, X and R9 are as defined above, as well as salts in which both hydroxy groups of the boronate group are deprotonated and mixtures of such salts. As previously indicated, the boronate may comprise a tetrahedral species.


3. Group III Metals


Suitable Group III metals include aluminium and gallium. Salts containing mixtures of Group III metals are also contemplated.


The disclosure includes products comprising salts of the formula (VIII):
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where M3+ is a Group III metal ion and aa1, aa2′, X and R9 are as defined above, as well as salts in which both hydroxy groups of the boronate group are in salt form and mixtures of such salts. As previously indicated, the boronate may comprise a tetrahedral species.


4. Strongly Basic Organic Nitrogen-Containing Compounds


The disclosure includes products obtainable by (having the characteristics of a product obtained by) reaction of a peptide boronic acid as defined above and a strong organic base. Two illustrative classes of organic base are described in sections 4A and 4B below. Particularly preferred are add salts (in which one of the two boronic —OH groups is deprotonated). Most commonly, the salts contain a single type of organic counter-ion (disregarding trace contaminants) but the disclosure contemplates salts containing mixtures of organic counter-ions; in one sub-class, the different counter-ions all fall within the section 4A family described below or, as the case may be, in the section 2B family below; in another subclass, the salts comprise a mixture of organic counter-ions which are not all from the same family (4A or 4B).


Suitable organic bases include those with a pKb of 7 or more, e.g. 7.5 or more, for example in the region of 8 or more. Bases which are less lipophilic [e.g. have at least one polar functional group (e.g. 1, 2 or 3 such groups) for example hydroxy] are favoured; thus aminosugars are one favoured class of base.


4A. Guanidines and Their Analogues


The guanidino compound (guanidine) may in principle be any soluble and pharmaceutically acceptable compound having a guanidino or a substituted guanidino group, or a substituted or unsubstituted guanidine analogue. Suitable substituents include aryl (e.g. phenyl), alkyl or alkyl interrupted by an ether or thioether linkage and, in any event, typically contain from 1 to 6 and especially 1, 2, 3, or 4 carbon atoms, as in the case of methyl or ethyl. The guanidino group may have 1, 2, 3 or 4 substituent groups but more usually has 1 or 2 substituent groups, for instance on a terminal nitrogen. One class of guanidines is monoalkylated; another class is dialkylated. As guanidine analogues may be mentioned thioguanidines and 2-amino pyridines. Compounds having unsubstituted guanidino groups, for example guanidine and arginine, form one particular class.


Salts containing mixtures of guanidines are contemplated by the disclosure.


A particular guanidino compound is L-arginine or an L-arginine analogue, for example D-arginine, or the D- or, preferably, L-isomers of homoarginine or agmatine [(4-aminobutyl) guanidine]. Less preferred arginine analogues are NG-nitro-L-arginine methyl ester, for example, and constrained guanidine analogues, particularly 2-amino pyrimidines, for example 2,6-quinazolinediamines such as 5,6,7,8-tetrahydro-2,6-quinazolinediamine, for example. The guanidino compound may also be a peptide, for example a dipeptide, containing arginine; one such dipeptide is L-tyrosyl-L-arginine.


Some particular guanidino compounds are compounds of formula (VII):
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where n is from 1 to 6 and for example at least 2, e.g. 3 or more, and in many instances no more than 5. Most particularly, n is 3, 4 or 5. R2 is H or carboxylate or derivatised carboxylate, for example to form an ester (e.g. a C1-C4 alkyl ester) or amide. R3 is H, C1-C4 alkyl or a residue of a natural or unnatural amino acid (e.g. tyrosine). The compounds of formula (IV) are usually of L-configuration. The compounds of formula (IV) are arginine (n=3; R2=carboxyl; R3═H) and arginine derivatives or analogues.


The disclosure includes products comprising salts of the formula (IX)
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where aa1, aa2, X and R1 are as defined previously and G+ is the protonated form of a pharmaceutically acceptable organic compound comprising a guanidino group or an analogue thereof, as well as salts in which both hydroxy groups of the boronate group are in salt form (preferably with another identical G+ group) and mixtures of such salts. Also included are products wherein R1 is replaced by another R9 group.


4B. Strongly Basic Amines


The disclosure includes products obtainable by (having the characteristics of a product obtained by) reaction of a peptide boronic acid as defined above and a strong organic base which is an amine. The amine may in principle be any soluble and pharmaceutically acceptable amine.


It is envisaged that a desirable class of amine includes those having polar functional groups in addition to a single amine group, as such compounds will be more hydrophilic and thus more soluble than others. In certain salts, the or each additional functional group is hydroxy. Some amines have 1, 2, 3, 4, 5 or 6 additional functional groups, especially hydroxy groups. In one illustrative class of amines the ratio of (amino plus hydroxy groups):carbon atoms is from 1:2 to 1:1, the latter ratio being particularly preferred. These amines with one or more additional polar functional groups may be a hydrocarbon, especially an alkane, substituted by the amino group and the additional polar group(s). The amino group may be substituted or unsubstituted and, excluding amino substituents, the polar base may contain, for example, up to 10 carbon atoms; usually there are no less than three such carbon atoms, e.g. 4, 5 or 6. Aminosugars are included in this category of polar bases.


The disclosure includes products comprising salts of the formula (X)
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where aa1, aa2, X and R1 are as defined previously and A+ is the protonated form of a pharmaceutically acceptable amine, as well as salts in which both hydroxy groups of the boronate group are in salt form (preferably with another identical A+ group) and mixtures of such salts. In one class of such products, A+ is the protonated form of an amine described in section 2B(i) below; in another class A+ is the protonated form of an amine described in 2B(ii) below. Also included are products in which R1 is replaced by another R9 group.


Two illustrative classes of amine base are described in sections 4B(i) and 4B(ii) below. Particularly preferred are acid salts (in which one of the two boronic —OH groups is deprotonated). Most commonly, the salts contain a single type of amine counter-ion (disregarding trace contaminants) but the disclosure contemplates salts containing mixtures of amine counter-ions; in one sub-class, the different counter-ions all fall within the sub-section 4B(i) family described below or, as the case may be, in the sub-section 4B(ii) family below; in another subclass, the salts comprise a mixture of organic counter-ions which are not all from the same family (4B(i) or 4B(ii)).


4B(i) Aminosugars


The identity of the aminosugar is not critical. Preferred aminosugars include ring-opened sugars, especially glucamines. Cyclic aminosugars are also envisaged as useful. One class of the aminosugars is N-unsubstituted and another, preferred, class is N-substituted by one or two N-substituents (e.g. one). Suitable substituents are hydrocarbyl groups, for example and without limitation containing from 1 to 12 carbon atoms; the substituents may comprise alkyl or aryl moieties or both. Exemplary substituents are C1, C2, C3, C4, C5, C6, C7 and C8 alkyl groups, in particular methyl and ethyl, of which methyl is illustrative. Data indicate that aminosugars, especially N-methyl-D-glucamine, are of surprisingly high solubility.


A most preferred aminosugar is N-methyl-D-glucamine:
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4B(ii) Other Amines


Other suitable amines include amino acids (whether naturally occurring or not) whose side chain is substituted by an amino group, especially lysine.


Some amines are compounds of formula (XI):
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where n, R2 and R3 are as defined in relation to formula (IV). The compounds of formula (VI) are usually of L-configuration. The compounds of formula (VI) are lysine (n=4; R2=carboxyl; R3═H) and lysine derivatives or analogues. A most preferred amine is L-lysine.


Other suitable amines are nitrogen-containing heterocycles. At least usually, such heterocyclic compounds are alicyclic; one class of the heterocyclic compounds is N-substituted and another, preferred, class is N-unsubstituted. The heterocycles may contain 6 ring-forming atoms, as in the cases of piperidine, piperazine and morpholine. One class of amines includes N-containing heterocycles substituted by polar substituents, especially hydroxy, e.g. 1, 2 or 3 times.


The disclosure therefore includes amines other than aminosugars which have one or more (e.g. 1, 2, 3, 4, 5 or 6) polar substituents, especially hydroxy, in addition to one amine group. Such compounds may have a ratio of (amino plus hydroxy groups):carbon atoms of 1:2 to 1:1, the latter ratio being particularly preferred.


The disclosure includes mixed salts, i.e. salts containing a mixture of boropeptide moieties and/or counterions but single salts are preferred.


The salts in solid form may contain a solvent, e.g. water. There are included a class of products in which the salts are essentially anhydrous. Also included is a class in which the salts are hydrates.


Synthetic Methods I


1. Peptide/Peptidomimetic Synthesis


The synthesis of boropeptides, including, for example, Cbz-D-Phe-Pro-BoroMpg-OPinacol is familiar to those skilled in the art and described in the prior art mentioned above, including Claeson et al (U.S. Pat. No. 5,574,014 and others) and Kakkar et al (WO 92/07869 and family members including U.S. Pat. No. 5,648,338). It is described also by Elgendy et al Adv. Exp. Med. Biol. (USA) 340: 173-178, 1993; Claeson, G. et al Biochem. J. 290: 309-312, 1993; Deadman et al J. Enzyme Inhibition 9: 29-41, 1995, and by Deadman et al J. Med. Chem. 38: 1511-1522, 1995.


Stereoselective synthesis with S or R configuration at the chiral B-terminal carbon may be conducted using established methodology (Elgendy et al Tetrahedron. Lett. 33: 4209-4212, 1992; WO 92/07869 and family members including U.S. Pat. No. 5,648,338) using (+) or (−)-pinanediol as the chiral director (Matteson et al J. Am. Chem. Soc. 108: 810-819, 1986; Matteson et al Organometallics. 3: 1284-1288, 1984). Another approach is to resolve the requisite aminoboronate intermediate (e.g. Mpg-BOPinacol) to selectively obtain the desired (R)-isomer and couple it to the dipeptide moiety (e.g. Cbz-(R)-Phe-(S)-Pro, which is the same as Cbz-D-Phe-L-Pro) which will form the remainder of the molecule.


The boropeptides may be synthesised initially in the form of boronic acid esters, particularly esters with diols. Such diol esters may be converted to the peptide boronic acid as described next.


2. Ester to Acid Conversion


A peptide boronate ester such as Cbz-(R)-Phe-Pro-BoroMpg-OPinacol may be hydrolysed to form the corresponding acid.


A novel technique for converting a diol ester of a peptide boronic acid of formula (I) into the acid comprises dissolving the diol ester in an ether and particularly a dialkyl ether, reacting the thus-dissolved diol with a diolamine, for example a dialkanolamine, to form a product precipitate, recovering the precipitate, dissolving it in a polar organic solvent and reacting the thus-dissolved product with an aqueous medium, e.g. an aqueous acid, to form the peptide boronic add. The boronic acid may be recovered from the organic layer of the mixture resulting from the reaction, for example by removing the solvent, e.g. by evaporation under vacuum or distillation. The reaction between the diol ester and the diolamine may be carried out under reflux, for example.


The identity of the diol is not critical. As suitable diols may be mentioned aliphatic and aromatic compounds having hydroxy groups that are substituted on adjacent carbon atoms or on carbon atoms substituted by another carbon. That is to say, suitable diols include compounds having at least two hydroxy groups separated by at least two connecting carbon atoms in a chain or ring. One class of diols comprises hydrocarbons substituted by exactly two hydroxy groups. One such diol is pinacol and another is pinanediol; there may also be mentioned neopentylglycol, 1,2-ethanediol, 1,2-propanediol, 1,3-propanediol, 2,3-butanediol, 1,2-diisopropylethanediol, 5,6-decanediol and 1,2-dicyclohexylethanediol.


The alkyl groups of the dialkyl ether preferably have 1, 2, 3 or 4 carbon atoms and the alkyl groups may be the same or different. An exemplary ether is diethyl ether.


The alkyl groups of the dialkanolamine preferably have 1, 2, 3 or 4 carbon atoms and the alkyl groups may be the same or different. An exemplary dialkanolamine is diethanolamine. The diethanolamine/boronic acid reaction product hydrolyses in water at room temperature and the rate of hydrolysis may be accelerated by adding acid or base.


The polar organic solvent is preferably CHCl3. Other examples are polyhalogenated alkanes generally and ethyl acetate. In principle, any polar organic solvent is acceptable other than alcohols.


The aqueous acid is suitably a strong inorganic acid at a pH in the region of 1 such as hydrochloric acid, for example.


After reaction with the acid, the reaction mixture is suitably washed with, for example, NH4Cl or another mild base.


An example of a specific procedure is as follows

  • 1. The pinacol or pinanediol ester of the selected peptide boronic acid is dissolved in diethylether.
  • 2. Diethanolamine is added and the mixture is refluxed at 40° C.
  • 3. The precipitated product is removed (filtered), washed (usually several times) with diethyl ether or another polar organic solvent other than an alcohol, and dried (e.g. by evaporation under vacuum).
  • 4. The dry product is dissolved in a polar organic solvent other than an alcohol, e.g. CHCl3. Aqueous acid or base is added, e.g. hydrochloric add (pH 1), and the mixture is stirred for e.g. approximately 1 h at room temperature.
  • 5. The organic layer is removed and washed with NH4Cl solution.
  • 6. The organic solvent is distilled off and the residual solid product is dried.


The above process results in the formation of what may conveniently be referred to as a “diolamine adduct” of the peptide boronic acids of formula (I), especially such adducts with diethanolamine, and such adducts are themselves included in the disclosure. The molecular structure of such adducts is not known: they might comprise a compound in which the two oxygens and the nitrogen of the diolamine are all coordinated to the boron; they might comprise ions. The adducts are however considered to be esters. A particular novel product included in the disclosure is that obtainable by reacting a pinacol or pinanediol ester of a compound of Formula VIII, particularly (R,S,R)-TRI 50c, and diethanolamine, i.e. the novel product is an (R,S,R)-TRI 50c/diethanolamine “adduct” where the acid is (R,S,R)-TRI 50c.


The diolamine materials of the disclosure may be defined as a composition of matter comprising:

    • (i) a species of formula (XII)
      embedded image

      wherein X is H or an amino protecting group, the boron atom is optionally coordinated additionally with a nitrogen atom, and the valency status of the terminal oxygens is open (they may be attached to a second covalent bond, be ionised as —O, or have some other, for example intermediate, status); and, in bonding association therewith
    • (ii) a species of formula (XIII)
      embedded image

      wherein the valency status of the nitrogen atom and the two oxygen atoms is open. It will be appreciated that the terminal oxygen atoms of the species of formula (IX) and the oxygen atoms of the species of formula (X) may be the same oxygen atoms, in which case the species of formula (X) forms a diol ester with the species of formula (IX).


It will be appreciated that the aforegoing technique comprises an example of a method for recovering an organoboronic acid product, the method comprising providing in a solvent a dissolved mixture comprising the organoboronic acid in a soluble form and a compound having two hydroxy groups and an amino group (i.e. a diolamine), causing or allowing the organoboronic acid and the diolamine to react to form a precipitate, and recovering the precipitate. The soluble form of the organoboronic add may be a diol ester, as discussed above. The solvent may be an ether, as discussed above. The organoboronic acid may be one of the organoboronic adds referred to in this specification, for example it may be of Formula (I) or (III).


The method described in this paragraph is novel and forms an aspect of the disclosure. A recovery method is filtration.


The reaction between the diolamine and the soluble form of the organoboronic add is suitable carried out at an elevated temperature, for example under reflux.


Another aspect of the disclosure is a method for recovering an organoboron species, comprising

    • providing, in a form soluble in an ether, an organoboronic acid, for example a drug such as, e.g., a compound of formula (III);
    • forming a solution of the soluble form in the ether;
    • combining the solution with a dialkanolamine and allowing or causing the dialkanolamine to react with the soluble form of the organoboronic acid to form an insoluble precipitate; and
    • recovering the precipitate.


The term “soluble” in the preceding paragraph refers to species which are substantially more soluble in the reaction medium than is the precipitated product. In variants of the method, the ether is replaced by toluene or another aromatic solvent.


The diethanolamine precipitation technique described above is an example of another novel method, which is a method for recovering from ether solution a pinacol or pinanediol ester of a peptide boronic acid, comprising dissolving diethanolamine in the solution, allowing or causing a precipitate to form and recovering the precipitate. The disclosure encompasses variants of this methods in which another diol than pinacol or pinanediol is used.


The precipitated material, i.e. the “adduct”, may be converted into the free organoboronic acid, for example by contacting it with an acid. The acid may be an aqueous acid, for example an aqueous inorganic acid, e.g. as described above. The precipitate may be dissolved, for example in an organic solvent, prior to being contacted with the acid.


The disclosure therefore provides a method for making an organoboronic acid, comprising converting its diolamine reaction product to the acid.


The acid resulting from the methods described in the previous two paragraphs may be converted to a salt of the acid with a multivalent metal, which salt may in turn be formulated into a pharmaceutical composition in parenteral dosage form.


3. Salt Synthesis


In general, the salts may be prepared by contacting the relevant peptide boronic add with a strong base appropriate to form the desired salt. In the case of metal salts, the metal hydroxides are suitable bases (alternatively, metal carbonates might be used, for example), whilst sometimes it is more convenient to contact the acid with a relevant metal alkoxide (e.g. methoxide), for which purpose the corresponding alkanol is a suitable solvent. Salts with organic bases may be prepared by contacting the peptide boronic acid with the organic base itself. Illustrative salts are acid salts (one —BOH proton replaced) and, to make acid salts with a monovalent cation, the acid and the base are suitably reacted in substantially equimolar quantities. Generally stated, therefore, the usual acid:base molar ratio is substantially n:1, where n is the valency of the cation of the base.


In one procedure, a solution of the peptide boronic acid in a water-miscible organic solvent, for example acetonitrile or an alcohol (e.g. ethanol, methanol, a propanol, for example iso-propanol, or another alkanol), is combined with an aqueous solution of the base. The acid and the base are allowed to react and the salt is recovered. The reaction is typically carried out at ambient temperature (e.g. at a temperature of from 15 to 30° C., e.g. 15 to 25° C.), but an elevated temperature may be used, for example up to the boiling point of the reaction mixture but more usually lower, e.g. a temperature of up to 40° C. or 50° C. The reaction mixture may be allowed to stand or be agitated (usually stirred).


The time during which the acid and the base are allowed to react is not critical but it has been found desirable to maintain the reaction mixture for at least one hour. A period of from one to two hours is usually suitable but longer reaction times may be employed.


The salt may be recovered from the reaction mixture by any suitable method, for example evaporation or precipitation. Precipitation may be carried out by adding an excess of a miscible solvent in which the salt has limited solubility. In one preferred technique, the salt is recovered by evacuating the reaction mixture to dryness. The salt is preferably thereafter purified, for example by redissolving the salt before filtering the resulting solution and drying it, for example by evacuating it to dryness. The redissolution may be performed using water, e.g. distilled water. The salt may then be further purified, for example in order to remove residual water by further redissolution in a suitable solvent, which is advantageously ethyl acetate or THF followed by evaporating to dryness. The purification procedure may be carried out at ambient temperature (say, 15 to 30° C., e.g. 15 to 25° C.), or at a modestly elevated temperature, such as e.g. a temperature not exceeding 40° C. or 50° C.; for example the salt may be dissolved in water and/or solvent by agitating with or without warming to, for example, 37° C.


Also included is a method for drying the salts of the disclosure and other peptide boronic acid salts, comprising dissolving them in an organic solvent, e.g. ethyl acetate or THF, and then evaporating to dryness, e.g. by evacuation.


Generally, preferred solvents for use in purifying the salts are ethyl acetate or THF, or perhaps another organic solvent.


A general procedure for synthesising salts of Cbz-Phe-Pro-BoroMpg-OH is as follows:


Cbz-Phe-Pro-BoroMpg-OH (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added the requisite base in solution in distilled water (190 ml); the base is added as a 0.2M solution for a monovalent cation. The resultant clear solution is allowed to react for example by being left to stand or being agitated, for a usual period, in either case, of from one to two hours. The reaction is typically carried out at ambient temperature (e.g. 15-30° C., e.g. 15 to 25° C.) but alternatively the temperature may be elevated (e.g. up to 30° C., 40° C. or 50° C.). The reaction mixture is then evacuated to dryness under vacuum with its temperature not exceeding 37° C., typically to yield a white brittle solid or an oil/tacky liquid. The oil/tacky liquid is redissolved in the minimum amount of distilled water necessary (200 ml to 4 L), typically with warming (e.g. to 30-40° C.), usually for up to 2 hours. The solution is filtered, suitably through filter paper, and evacuated to dryness, again with the temperature of the solution not exceeding 37° C., or freeze dried. The resultant product is dried under vacuum overnight to normally yield a white brittle solid. If the product is present as an oil or tacky solid then it is dissolved in ethyl acetate and evacuated to dryness to produce the product as a white solid. The white solid is typically a coarse, amorphous powder.


In variations of the aforegoing general procedure, the acetonitrile is replaced by another water-miscible organic solvent, notably an alcohol, as discussed above, especially ethanol, methanol, iso-propanol or another propanol.


Where a boronic acid salt is less soluble in a selected reaction medium for salt formation such that its direct preparation from the corresponding acid and base is inconvenient, the less soluble salt may be prepared from a salt more soluble in the reaction medium.


There is provided also the use of a boronic acid to make a salt of the disclosure. Included also is a method of preparing a product of the disclosure, comprising contacting a boronic acid, e.g. of formula (I), (II) or (III), with a base capable of making such a salt.


The peptide boronic add of formula (I) used to prepare the pharmaceutical preparations is typically of GLP or GMP quality, or in compliance with GLP (good laboratory practice) or GMP (good manufacturing practice); such acids are included in the disclosure.


Similarly the acids are usually sterile and/or acceptable for pharmaceutical use, and one aspect of the disclosure reside in a composition of matter which is sterile or acceptable for pharmaceutical use, or both, and comprises a peptide boronic acid of formula (I). Such a composition of matter may be in particulate form or in the form of a liquid solution or dispersion.


The intermediate acid may be in isolated form and such isolated acids are included in the disclosure, especially isolated acids which are a peptide boronic add of formula (VIII):

X-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2  (VIII)

wherein X is H (to form NH2) or an amino-protecting group.


One typical way of providing the intermediate adds is as a particulate composition consisting predominantly of such a peptide boronic acid, and these compositions are included in the disclosure. The peptide boronic acid often forms at least 75% by weight of the composition and typically at least 85% by weight of the composition, e.g. at least 95% by weight of the composition.


Another typical way of providing the intermediate acids is as a liquid composition consisting of, or consisting essentially of, a peptide boronic acid of formula (II) and a liquid vehicle in which it is dissolved or suspended. The liquid vehicle may be an aqueous medium, e.g. water, or an alcohol, for example methanol, ethanol, isopropanol, or another propanol, another alkanol or a mixture of the aforegoing.


The compositions of the intermediate acids are generally sterile. The compositions may contain the peptide boronic acid in finely divided form, to facilitate further processing.


4. Separation of Stereoisomers


The stereoisomers of a peptide boronic ester or a synthetic intermediate aminoboronate may be resolved in, for example, any known way. In particular, stereoisomers of boronic esters may be resolved by HPLC.


Synthetic Methods II—Stability and Purity of the Compounds


Existing publications teach that organoboronic acids are degraded by oxidation of the C—B bond. See for example Wu et al (see above). Earlier work on the salts of TRI 50c confirmed that these salts and/or intermediates in their preparation are slightly unstable, to the extent that the salts were found to contain a boron-free impurity, designated impurity I, which was evidently generated by C—B bond cleavage. The salts as a class are significantly more stable to such degradation than the free acid.


These earlier TRI 50c salts were made via the general methods described in Examples 5 and 9 of this specification. Impurity I has the following structure:
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For example, an HPLC chromatogram, prepared using a reverse phase method more particularly described in Example 34, produced the following data for the monosodium salt of TRI 50c, made by following the procedures of Examples 5 and 9 herein:

RT%Name(min)AreaHeightAmountUnitsArea1Benzalde-6.145 24872240.39hyde2Impurity I11.022 63795391.003TRI50c11.67962887251108946,063ug/mL98.61


Attempts to purify salts contaminated with Impurity I were not successful, and it appeared that, for example, Impurity I was generated from the salts in HPLC columns.


Relative chiral purity of salts made following the general procedure of Examples 5 and 9 was achieved by resolving by HPLC the pinacol ester of TRI 50c, designated TRI 50b, and converting the thus-resolved TRI 50b into the salts. Such an HPLC procedure is not acceptable for normal commercial drug production.


It has further been found that the prior art synthesis summarised earlier under the heading “Aminoboronate Procedure” results, when applied to the synthesis of TRI 50c or an ester thereof, in formation of an impurity designated Impurity IV:
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Attempts to separate Impurity IV from TRI 50c have not succeeded. The same applies to TRI 50c salts and esters and the corresponding salts and esters of Impurity IV. No purification technique which has been tried can prevent the presence of Impurity IV if said prior art synthesis is used.


Synthetic Method II—The Methods


Amongst other things, the present disclosure addresses the problems of controlling C—B bond cleavage in organoboronic compounds as well as providing chirally purified salts of TRI 50c and other organoboronic acids on a commercial scale. In this regard, it has been found that C—B bonds seem to be cleaved by a non-oxidative mechanism which occurs in the presence of many solvents, including water and e.g. aqueous acids and bases, amongst others.


It has also been found that chirally-selective precipitation can be used to recover organoboronic acids in high purity.


Thus C—B bond cleavage (and hence in particular generation of Impurity I) may be controlled by:

    • Selection of acetonitrile as a solvent, where a solvent is required in processing and acetonitrile has the necessary solvation power; in particular acetonitrile is selected in process where a polar solvent is desirable or necessary.
    • Avoiding excessive contact with water.


In terms of TRI 50c salt production, therefore, the disclosure includes processes comprising one, two or three of the following features:

    • (i) resolution of the (R,S,S) and (R,S,R) epimers of TRI 50c by chirally selective precipitation using diethanolamine and conveniently, but not necessarily, using as starting material TRI 50c in the form of an ester, for example the pinacol ester;
    • (ii) control of the duration and/or conditions of hydrolysis of TRI 50c diethanolamine ester, for example as obtained by such precipitation, to control C—B bond breakage;
    • (iii) use of acetonitrile as solvent for TRI 50c, for example as obtained by such hydrolysis, for the purposes of reacting the TRI 50c with a base to form the salt. Another favourable solvent can be tetrahydrofuran.


As an optional, or even stand-alone, fourth feature, TRI 50c salts may be dried by azeodrying using acetonitrile.


It is considered that C—B bond cleavage may occur by a nucleophilic mechanism, and the disclosure therefore includes methods in which opportunities for nucleophilic attack are minimised.


The above four features, or any one, two or three of them, may be applied to the manufacture and processing of other boronic compounds, particularly acids of formula (I) and their derivatives (e.g. esters and salts).


The disclosure provides in one aspect, therefore, the use of diethanolamine to resolve by selective precipitation the diastereomers of boronic acids of formula (Ia):
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    • where:
    • X is H (to form NH2) or an amino-protecting group;
    • aa1 is an amino acid of (R) configuration selected from Phe, Dpa and wholly or partially hydrogenated analogues thereof;
    • aa2 is an imino acid of (S) configuration having from 4 to 6 ring members;
    • R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen selected from F, Cl, Br or I,
    • and where C* is a chiral centre.


The starting material may be an acid (Ia) or a derivative thereof capable of forming a diethanolamine ester of the boronic acid. The precipitation selects acids having a chiral centre C* of (R) configuration as precipitate. The precipitate may be recovered and converted to the corresponding boronic acid or a salt thereof. The salt may be made into a pharmaceutical formulation. In practice, the starting material may contain trace amounts of acid in which the fragment aa1-aa2 is not of (R,S) configuration, e.g. it may be at least 99.5% (R,S), and in some cases at least 99.7% (R,S).


For optimised chiral purity and yield, the diethanolamine may be used in an amount of about 1.25±0.1 equivalents based on initial equivalents of boronic acid having a chiral centre C* of (R) configuration.


The initial boronic acid or acid derivative may for example comprise from 50% to 60% molecules having chiral centre C* of (R)-configuration and from 40% to 50% molecules having chiral centre C* of (S)-configuration.


The method opens the way to commercialisation of the boronic acids (Ia) and their derivatives, particularly salts, as pharmaceuticals. Commercial scale products and activities using the boronic acids (Ia) and their derivatives are therefore provided.


In one embodiment, there is provided a process for separating diastereomers of a boronic acid of formula (Ia), comprising:

    • combining in diethylether solution (A) a boronic species selected from the boronic acid (I) and its esters, the boronic species including molecules having a chiral centre C* of (R) configuration and molecules having a chiral centre C* of (S) configuration, and (B) diethanolamine, the diethanolamine being in an amount of about 1.25±0.1 equivalents based on the boronic species in which the chiral centre C* is of (R) configuration, and mixing to form a mixture;
    • causing or allowing the boronic species and the diethanolamine to react until a precipitate forms; and
    • recovering the precipitate.


When the starting material is an ester, it may be an ester of the boronic add with an alcohol selected from the group consisting of alcohols whose sole potential electron donor heteroatoms are oxygens which, in the boronic ester, correspond to the oxygens of the ester functional group.


In some methods, the diethanolamine is in an amount of from 1.2 to 1.3 equivalents based on the boronic species in which chiral centre C* is of (R) configuration.


There are included processes in which the boronate species is an ester of the boronic acid and a diol, in particular a diol which is not sterically hindered. As exemplary diols may be mentioned pinacol, neopentylglycol, 1,2-ethanediol, 1,2-propanediol, 1,3-propanediol, 2,3-butanediol, 1,2-diisopropylethanediol, or 5,6-decanediol. A particular diol is pinacol.


The boronic species and the diethanolamine may be caused to react by heating the mixture to an elevated temperature, for example the mixture may be refluxed. e.g. for at least 10 hours.


The precipitate may be recovered by filtration. The recovered precipitate may be washed with diethylether. The recovered precipitate, after washing if such takes places, may be dissolved in a solvent selected from CH2Cl2 and CHCl3 and reprecipitated by combining the resulting solution with diethylether. A particular solvent is CH2Cl2.


The recovered precipitate (consisting substantially exclusively of an adduct between diethanolamine and the (R,S,R) isomer of the acid) may be converted to the acid of formula (Ia), suitably by hydrolysis, for example by dissolving the precipitate in an organic solvent selected from e.g. halohydrocarbons and combinations thereof, agitating the resulting solution with an aqueous liquid, e.g. an aqueous acid having a pH of below 3, whereby the dissolved precipitate is converted to the formula (Ia) acid, and recovering the formula (Ia) acid by evaporation. The organic solvent may be CH2Cl2 or CHCl3. A particular solvent is CH2Cl2. In some processes, organic solvent is further evaporated from the recovered formula (Ia) acid.


The disclosure includes methods in which an ester (particularly a diethanolamine ester) of a organoboronic acid, for example an aminoboronate or peptide boronate such as, e.g. a boronic acid of formula (I) or formula (Ia), is hydrolysed in a manner which controls C—B bond cleavage. In particular, this involves limiting the period of hydrolysis at the selected temperature. In the case of diethanolamine ester hydrolysis, the hydrolysis is suitably carried out at room temperature, or less, for a period not exceeding about 30 minutes, e.g. not exceeding about 20 minutes, and optimally of about 20 minutes. In more general terms, the duration of hydrolysis of the ester is limited to avoid substantial C—B bond breakage, i.e. substantially to avoid generation of the degradation product resulting from such bond breakage. By way of example, the product add (or a salt produced therefrom) may contain at most about 0.5% of such degradation product by weight of the total product, e.g. less than about 0.3 wt % and often less than about 0.2 wt %. The content of C—B bond degradation product may be about 0.1 wt % or less. In particular instances, there is no more than about 0.05% degradation product as determined by reverse phase HPLC (see Example 43 below). Included are boronic acids and their base addition salts in which there is no C—B degradation product detectable by the HPLC technique of Example 43, or about such amount; of course, hydrolysis methods which result in boronic acids having such a level of purity are also included. In the case of TRI 50c and its salts, the degradation product of C—B bond cleavage of which it is substantially free is Impurity I; base addition salts of TRI 50c have been prepared in which Impurity I was not detected with the initial HPLC analysis.


The disclosure includes methods in which an ester of a boronic acid (I) or formula (Ia), particularly a diethanolamine ester, is hydrolysed in a manner which controls C—B bond cleavage. In particular, this involves limiting the period of hydrolysis at the selected temperature. In the case of diethanolamine ester hydrolysis, the hydrolysis is suitably carried out at room temperature, or less, for a period not exceeding about 30 minutes, e.g. not exceeding about 20 minutes, and optimally of about 20 minutes.


Thus the recovered precipitate referred to in the last paragraph but one may be hydrolysed using an aqueous acid, particularly 2% hydrochloric acid or another mineral acid of similar pH, for no more than about 30 minutes at about room temperature, or less. Suitably, the precipitate is dissolved in a non-nucleophilic organic solvent (e.g. a halohydrocarbon or halohydrocarbon mixture for example CH2Cl2) and the resulting solution is contacted with the aqueous acid for a period as previously described. The precipitate is thereby hydrolysed to form the free acid of formula (I) or (Ia), which remains in the organic solvent. The organic solvent may be separated from the aqueous medium and then evaporated to obtain solid acid of formula (I) or (Ia).


There are included processes in which a formula (I) or formula (Ia) acid, for example obtained as described in the preceding paragraph, is dried. In a class of processes, the formula (I) add is dried when it is in the organic solvent by contacting the solvent with a hygroscopic solid.


Included are processes in which the formula (I) or formula (Ia) add, when in the organic solvent, is washed with an aqueous ammonium salt.


Chirally purified boronic acid may be converted to a pharmaceutically acceptable base addition salt thereof, in particular by dissolving the add in acetonitrile, combining the resultant solution with an aqueous solution or suspension of a pharmaceutically acceptable base, and causing or allowing the base and the acid to react, then evaporating to dryness to obtain an evaporation residue. The step of causing or allowing the acid and the base to react may comprise agitating the combination of the acetonitrile solution of the acid and the aqueous solution or suspension of the base at a temperature of not more than 35° C. and often of not more than 30° C., e.g. not more than 25° C.; an optimal temperature is room temperature, in which case a reaction time of about 2 hours might be appropriate. The process may further comprise:

    • (i) redissolving the evaporation residue in acetonitrile and evaporating the resulting solution to dryness; and
    • (ii) repeating step (i) as often as necessary to obtain a dry evaporation residue.


In some processes the dry evaporation residue is dissolved in acetonitrile or tetrahydrofuran to form a solution, and the solution is combined with (e.g. slowly added to, at a rate sufficiently slow to avoid lump formation) a 3:1 to 1:3 v/v mixture of diethylether and an aliphatic or cycloaliphatic solvent to form a precipitate, said solution being added to the diethylether/(cyclo)aliphatic solvent mixture in a ratio (solution:mixture) of from 1:5 to 1:15 v/v. The precipitate is recovered and some or substantially all remaining solvent is removed from the recovered precipitate whilst maintaining the temperature at no more than 35° C., e.g. is removed under reduced pressure. Included are processes in which the temperature at the start of the drying process is about 10° C. and is increased during the process to 35° C. The aliphatic or cycloaliphatic solvent may have 6, 7 or 8 carbon atoms; the solvent may be an alkane, for example an n-alkane, e.g. n-heptane. Some reactions may be carried out at ambient temperature, which may e.g. be 15-30° C., e.g. 20-30° C.; sometimes ambient temperature may be room temperature.


The salts produced by the invention may contain a trace amount of the aliphatic or cycloaliphatic solvent, e.g. an amount of less than 0.1%, particularly less than 0.01%, for example an amount of about 0.005%.


In the process for making the salt, the base may comprise a cation of valency n and be used in a stoichiometry (boronic acid:base) of about n:1. In particular processes, the base is an alkali metal or alkaline earth metal base, for example an alkali metal hydroxide or an alkaline earth metal hydroxide. As one base may be mentioned sodium hydroxide. As another base may be mentioned calcium hydroxide. The disclosure includes processes in which the base is sodium hydroxide and the dry evaporation residue is dissolved in acetonitrile. The disclosure includes processes in which the base is calcium hydroxide and the dry evaporation residue is dissolved in tetrahydrofuran.


The disclosure is not limited as to the method by which the boronic acids of Formula (I) or Formula (Ia) are obtained (for example as an ester thereof). However, in one class of subject matter, the Formula (I) acid has an R1 group of the formula —(CH2)S—O—R3 in which R3 is methyl or ethyl and s is independently 2, 3 or 4, and the Formula (I) acid is prepared via an intermediate of Formula (XXV):

(HO)2B—(CH2)S—O—R3  (XXV),

which intermediate is made by reaction between a borate ester and a suitable 1-metalloalkoxyalkane.


A novel aspect of the disclosure comprises the Formula (XXV) intermediates.


The Formula (XXV) intermediates may be made by reacting a 1-metalloalkoxyalkane, where the alkoxyalkane is of the formula —(CH2)s—O—R3, with a borate ester to form a compound of Formula (XXV).


It will be appreciated that the above method provides a general procedure for making alkoxyalkylboronic acids, which may be presented by the formula RZ—O—RY—B(OH)2. Such alkoxyalkylboronic acids may be converted to aminoboronates, and the aminoboronates may be derivatised at their amino group to form an amide bond linked to another moiety. In other words, the aminoboronates may be converted to boropeptides. The method will now be described further with non-limiting reference to compounds of Formula (XXV).


The starting materials for the reaction may be a metalloalkoxyalkane, e.g. a Grignard reagent, obtainable from 1-haloalkoxyalkane of the formula Hal-(CH2)S—O—R3 (where Hal is a halogen) and a borate ester. The metal is in particular magnesium. Another metal is lithium, in which case the metallo reagent may be prepared by reacting the 1-haloalkoxyalkane with butyl lithium. Where the method includes preparation of the metallo reagent from the haloalkoxyalkane, the haloalkoxyalkane may be a chloroalkoxyalkane; the corresponding bromo compounds may also be used. To make a Grignard reagent, magnesium may be reacted with the haloalkoxyalkane.


Suitable borate esters are esters of mono- and di-functional alcohols (e.g. of EtOH, MeOH, BuOH, pinacol, glycol, pinanediol etc). For example, the ester may be of the formula B(ORa)(ORb)(ORc) where Ra, Rb and Rc and C1-C4 alkyl and may be the same as each other.


An exemplary procedure for making a Formula (XXV) intermediate, illustrated with reference to methoxypropane as the alkoxyalkane species, is:
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The reactions are suitably carried out in an organic solvent, e.g. THF.


The above-described procedure for making alkoxyalkylboronic acids avoids generation of Impurity IV (see above), or its analogues in those cases where the end product is not TRI 50c or a derivative (salt, ester etc) thereof. The procedure therefore provides a unique route to making TRI 50c, its esters and salts, uncontaminated by Impurity IV, and for making other aminoboronic acids which are substituted α- to the boron by an alkoxyalkyl group and are uncontaminated by impurities analogous to Impurity IV.


An alkoxyalkylboronic acid, i.e. a compound which may be represented by the formula RZO—RY—B(OH)2, may be converted to an aminoboronic compound, for example a boropeptide, by any suitable procedure, e.g. one known in the art. A reaction scheme for making alkoxyalkylboronic acids into aminoboronates, and for converting aminoboronates into peptide boronates is illustrated with reference to synthesis of TRI 50c at the start of the Examples of this specification. The reaction scheme may be modified as desired, e.g.: diethanolamine precipitation and subsequent steps may be omitted, and/or reagent substitutions may be made. For example, pinacol may be replaced by another diol. LDA is a non-nucleophilic strong base and may be replaced by another such base. Other examples include, but are not limited to, lithium diisopropylamide, lithium 2,2,6,6-tetramethylpiperidine, 1-lithium 4-methylpiperazide, 1,4-dilithium piperazide, lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, potassium bis(trimethylsilyl)amide, isopropyl magnesium chloride, phenyl magnesium chloride, lithium diethylamide, and potassium tert-butoxide. The reactions may be carried out in any suitable solvent: where n-heptane is used in the Examples, it may be replaced by another inert non-polar solvent, e.g. another aliphatic or cycloaliphatic solvent, for example an alkane, e.g. an n-alkane.


Thus, the disclosure includes a process for making an aminoboronate of Formula (XXI)
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wherein

  • RX is H or a substituent which does not prevent synthesis;
  • RY is alkylene; and
  • RZ is alkyl,


    the process comprising reacting a 1-metalloalkoxyalkane with a borate ester to form a boronic add of the formula RZ—O—RY—B(OH)2, esterifying the add, contacting the esterified acid with CH2Cl2 and ZnCl2 in the presence of a strong base, contacting the resultant produce with LiHMDS and in turn contacting the resultant product with hydrogen chloride.


The product is free of contaminant of Formula (XXII):

H2N—C(RX)(RY)—B(OH)2  (XXII).


The aminoboronate (XXI) may be reacted with an amino acid or peptide (which in either case may be suitably protected) to form a peptide boronate. In general terms, therefore, the disclosure includes peptidoboronic acids of Formula (XXIII):
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  • Q-CO comprises at least an amino acid residue;
  • RX is H or a substituent which does not prevent synthesis;
  • RY is alkylene;
  • RZ is alkyl,


    which organoboronic acid is free of an impurity of Formula (XXIV):
    embedded image


The disclosure further includes derivatives of Formula (XXIII) acids (e.g. acid or base addition salts, esters) which are free of Formula (XXIV) impurity and derivatives thereof.


The exact identity of RY and RZ is dependent on the identity of the end product, and not part of the process or its benefits.


It will be appreciated from the aforegoing that the above described methods may be used in the manufacture of organoboronic acids salts as described. It is not necessary for sequential steps to be carried out as one operation or at the same site: they may be performed in this way or different processes (different parts of the overall synthesis) may be distributed in time and/or space. Particular end product salts are monosodium, monolithium, hemicalcium and hemimagnesium salts, for example of TRI 50c.


Generally, the reactions may suitably be carried out with a non-nucleophilic solvent. Where a nucleophilic solvent is present, minimum contact is preferred, for example in the case of hydrolysis of diethanolamine esters.


The High Purity Products


The “high purity products” of the invention include inter alia boronic acids, diethanolamine esters and salts obtainable by (having the characteristics of a product obtained by) the disclosed methods. Also included are products obtained directly or indirectly by the disclosed methods.


Particular products of the disclosure are base addition salts of a boronic acid of formula (I) having the chiral purity of such salt when prepared by a method described herein, as well as such boronic acids having a chiral purity obtainable by a method described herein.


Included are esters of boronic acids of formula I (for example, diethanolamine esters), the free acids of formula (I) and salts of the free acid which comprise the (R,S,R) diastereomer in a diastereomeric excess over the (R,S,S) diastereomer of about 95% or more. The (R,S,R) isomer may be in a diastereomeric excess of at least about 98%, and optionally of about 99% or more, e.g. about 99.5% or more. Further included are salts having a diastereomeric excess [(R,S,R) over (R,S,S)] of about 99.5% or more and purity as measured by % HPLC peak area of at least 95% when determined by the method of Example 5; in particular, the salt is a metal salt of TRI 50c, e.g. an alkali metal or alkaline earth metal salt.


Other products are base addition salts of a boronic acid of formula (I) having the purity of such salt when prepared by a method described herein.


Product identities will be apparent from the preceding description and the following examples. In addition, products of the disclosure are described in the claims. Of particular note are the data in Example 43, indicating that the processes of the invention can remarkably achieve end product salts free of impurities detectable by the described HPLC method. In other instances, the salts are substantially free of impurities, e.g. at least 98% pure, more usually at least 99% pure, e.g. at least 99.5% pure, in terms of reverse phase (RP) HPLC percentage peak area. Salts may at least 99.3%, 99.4%, 99.5% 99.6%, 99.7%, 99.8% or 99.9% pure, in terms of reverse phase (RP) HPLC percentage peak area. Suitable RP HPLC procedures comply with reference 1 and/or reference 2 and/or reference 3 of Example 43. Included also are products at least substantially free of Impurity I and analogues, products free of Impurity IV and analogues, and products containing small traces of non-polar solvent, e.g. n-heptane. The trace amount of non-polar solvent may be less than 0.2%, 0.1%, 0.05%, 0.01% or 0.005% as determined by GC-headspace chromatography.


Also to be mentioned is Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, and the salts thereof, substantially free of Impurity I, i.e. the compound:
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A further class of compounds comprises Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, and the esters and salts thereof, substantially free of Impurity IV, i.e. the compound:
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Included also are salts containing less than 410 ppm acetonitrile.


Some salts contain impurities of less than 10,000 ppm, 5000 ppm, 1000 ppm, or 500 ppm.


Use of the Products of the Disclosure


The salts of the disclosure are thrombin inhibitors. They are therefore useful for inhibiting thrombin. There are therefore provided compounds which have potential for controlling haemostasis and especially for inhibiting coagulation, for example in the treatment or prevention of secondary events after myocardial infarction. The medical use of the compounds may be prophylactic (including to treat thrombosis as well as to prevent occurrence of thrombosis) as well as therapeutic (including to prevent re-occurrence of thrombosis or secondary thrombotic events).


The salts may be employed when an anti-thrombogenic agent is needed. Further, it has been found that the salts, including those of boronic adds of Formula (III), are beneficial in that the class is useful for treating arterial thrombosis by therapy or prophylaxis. The disclosed salts are thus indicated in the treatment or prophylaxis of thrombosis and hypercoagulability in blood and tissues of animals including man. The term “thrombosis” includes inter alia atrophic thrombosis, arterial thrombosis, cardiac thrombosis, coronary thrombosis, creeping thrombosis, infective thrombosis, mesenteric thrombosis, placental thrombosis, propagating thrombosis, traumatic thrombosis and venous thrombosis.


It is known that hypercoagulability may lead to thromboembolic diseases.


Examples of venous thromboembolism which may be treated or prevented with compounds of the disclosure include obstruction of a vein, obstruction of a lung artery (pulmonary embolism), deep vein thrombosis, thrombosis associated with cancer and cancer chemotherapy, thrombosis inherited with thrombophilic diseases such as Protein C deficiency, Protein S deficiency, antithrombin III deficiency, and Factor V Leiden, and thrombosis resulting from acquired thrombophilic disorders such as systemic lupus erythematosus (inflammatory connective tissue disease). Also with regard to venous thromboembolism, compounds of the disclosure are useful for maintaining patency of indwelling catheters.


Examples of cardiogenic thromboembolism which may be treated or prevented with compounds of the disclosure include thromboembolic stroke (detached thrombus causing neurological affliction related to impaired cerebral blood supply), cardiogenic thromboembolism associated with atrial fibrillation (rapid, irregular twitching of upper heart chamber muscular fibrils), cardiogenic thromboembolism associated with prosthetic heart valves such as mechanical heart valves, and cardiogenic thromboembolism associated with heart disease.


Examples of conditions involving arterial thrombosis include unstable angina (severe constrictive pain in chest of coronary origin), myocardial infarction (heart muscle cell death resulting from insufficient blood supply), ischemic heart disease (local ischemia due to obstruction (such as by arterial narrowing) of blood supply), reocclusion during or after percutaneous transluminal coronary angioplasty, restenosis after percutaneous transluminal coronary angioplasty, occlusion of coronary artery bypass grafts, and occlusive cerebrovascular disease. Also with regard to arterio-venous (mixed) thrombosis, anti-thrombotic compounds of the disclosure are useful for maintaining patency in arteriovenous shunts.


Other conditions associated with hypercoagulability and thromboembolic diseases which may be mentioned inherited or acquired deficiencies in heparin cofactor II, circulating antiphospholipid antibodies (Lupus anticoagulant), homocysteinemia, heparin induced thrombocytopenia and defects in fibrinolysis.


Particular uses which may be mentioned include the therapeutic and/or prophylactic treatment of venous thrombosis and pulmonary embolism. Preferred indications envisaged for the products of the disclosure (notably the salts of TRI 50c) include:

    • Prevention of venous thromboembolic events (e.g. deep vein thrombosis and/or pulmonary embolism). Examples include patients undergoing orthopaedic surgery such as total hip replacement, total knee replacement, major hip or knee surgery; patients undergoing general surgery at high risk for thrombosis, such as abdominal or pelvic surgery for cancer; and in patients bedridden for more than 3 days and with acute cardiac failure, acute respiratory failure, infection.
    • Prevention of thrombosis in the haemodialysis circuit in patients, in patients with end stage renal disease.
    • Prevention of cardiovascular events (death, myocardial infarction, etc) in patients with end stage renal disease, whether or not requiring haemodialysis sessions.
    • Prevention of venous thrombo-embolic events in patients receiving chemotherapy through an indwelling catheter.
    • Prevention of thromboembolic events in patients undergoing lower limb arterial reconstructive procedures (bypass, endarteriectomy, transluminal angioplasty, etc).
    • Treatment of venous thromboembolic events.
    • Prevention of cardiovascular events in acute coronary syndromes (e.g. unstable angina, non Q wave myocardial ischaemia/infarction), in combination with another cardiovascular agent, for example aspirin (acetylsalicylic acid; aspirin is a registered trade mark in Germany), thrombolytics (see below for examples), antiplatelet agents (see below for examples).
    • Treatment of patients with acute myocardial infarction in combination with acetylsalicylic add, thrombolytics (see below for examples).


The thrombin inhibitors of the disclosure are thus indicated both in the therapeutic and/or prophylactic treatment of all the aforesaid disorders.


In one method, the products of the disclosure are used for the treatment of patients by haemodialysis, by providing the product in the dialysis solution, as described in relation to other thrombin inhibitors in WO 00/41715. The disclosure therefore includes dialysing solutions and dialysing concentrates which comprise a product of the disclosure, as well as a method of treatment by dialysis of a patient in need of such treatment, which method comprises the use of a dialysing solution including a low molecular weight thrombin inhibitor. Also included is the use of an anti-thrombotic product of the disclosure for the manufacture of a medicament for the treatment by dialysis of a patient, in which the anti-thrombotic product of the disclosure is provided in the dialysing solution.


In another method, the products of the disclosure are used to combat undesirable cell proliferation, as described in relation to other thrombin inhibitors in WO 01/41796. The undesirable cell proliferation is typically undesirable hyperplastic cell proliferation, for example proliferation of smooth muscle cells, especially vascular smooth muscle cells. The products of the disclosure particularly find application in the treatment of intimal hyperplasia, one component of which is proliferation of smooth muscle cells. Restenosis can be considered to be due to neointimal hyperplasia; accordingly intimal hyperplasia in the context of the disclosure includes restenosis.


The products of the disclosure are also contemplated for the treatment of ischemic disorders. More particularly, they may be used in the treatment (whether therapeutic or prophylactic) of an ischemic disorder in a patient having, or at risk of, non-valvular atrial fibrillation (NVAF) as described in relation to other thrombin inhibitors in WO 02/36157. Ischemic disorders are conditions whose results include a restriction in blood flow to a part of the body. The term will be understood to include thrombosis and hypercoagulability in blood, tissues and/or organs. Particular uses that may be mentioned include the prevention and/or treatment of ischemic heart disease, myocardial infarction, systemic embolic events in e.g. the kidneys or spleen, and more particularly of cerebral ischemia, including cerebral thrombosis, cerebral embolism and/or cerebral ischemia associated with non-cerebral thrombosis or embolism (in other words the treatment (whether therapeutic or prophylactic) of thrombotic or ischemic stroke and of transient ischemic attack), particularly in patients with, or at risk of, NVAF.


The products of the disclosure are also contemplated for the treatment of rheumatic/arthritic disorders, as described in relation to other thrombin inhibitors in WO 03/007984. Thus, the products of the disclosure may be used in the treatment of chronic arthritis, rheumatoid arthritis, osteoarthritis or ankylosing spondylitis.


Moreover, the products of the disclosure are expected to have utility in prophylaxis of re-occlusion (i.e. thrombosis) after thrombolysis, percutaneous trans-luminal angioplasty (PTA) and coronary bypass operations; the prevention of re-thrombosis after microsurgery and vascular surgery in general. Further indications include the therapeutic and/or prophylactic treatment of disseminated intravascular coagulation caused by bacteria, multiple trauma, intoxication or any other mechanism; anticoagulant treatment when blood is in contact with foreign surfaces in the body such as vascular grafts, vascular stents, vascular catheters, mechanical and biological prosthetic valves or any other medical device; and anticoagulant treatment when blood is in contact with medical devices outside the body such as during cardiovascular surgery using a heart-lung machine or in haemodialysis.


The products of the disclosure are further indicated in the treatment of conditions where there is an undesirable excess of thrombin without signs of hypercoagulability, for example in neurodegenerative diseases such as Alzheimer's disease. In addition to its effects on the coagulation process, thrombin is known to activate a large number of cells (such as neutrophils, fibroblasts, endothelial cells and smooth muscle cells). Therefore, the compounds of the disclosure may also be useful for the therapeutic and/or prophylactic treatment of idiopathic and adult respiratory distress syndrome, pulmonary fibrosis following treatment with radiation or chemotherapy, septic shock, septicaemia, inflammatory responses, which include, but are not limited to, edema, acute or chronic atherosclerosis such as coronary arterial disease, cerebral arterial disease, peripheral arterial disease, reperfusion damage, and restenosis after percutaneous trans-luminal angioplasty (PTA).


The salts may also be useful in the treatment of pancreatitis.


The salts described herein are further considered to be useful for inhibiting platelet procoagulant activity. The disclosure provides a method for inhibiting platelet pro-coagulant activity by administering a salt of a boronic acid described herein to a mammal at risk of, or suffering from, arterial thrombosis, particularly a human patient. Also provided is the use of such salts for the manufacture of medicaments for inhibiting platelet procoagulant activity.


The use of products of the disclosure as inhibitors of platelet pro-coagulant activity is predicated on the observation that the boronic acids described herein are indicated to be effective at inhibiting arterial thrombosis as well as venous thrombosis.


Indications involving arterial thrombosis include acute coronary syndromes (especially myocardial infarction and unstable angina), cerebrovascular thrombosis and peripheral arterial occlusion and arterial thrombosis occurring as a result of atrial fibrillation, valvular heart disease, arterio-venous shunts, indwelling catheters or coronary stents. Accordingly, in another aspect there is provided a method of treating a disease or condition selected from this group of indications, comprising administering to a mammal, especially a human patient, a salt of the disclosure. The disclosure includes products for use in an arterial environment, e.g. a coronary stent or other arterial implant, having a coating which comprises a salt according to the disclosure.


The salts of the disclosure may be used prophylactically to treat an individual believed to be at risk of suffering from arterial thrombosis or a condition or disease involving arterial thrombosis or therapeutically (including to prevent re-occurrence of thrombosis or secondary thrombotic events).


There is therefore included the use of selective thrombin inhibitors (organoboronic acid salts) described herein for treatment of the above disorders by prophylaxis or therapy as well as their use in pharmaceutical formulations and the manufacture of pharmaceutical formulations.


Administration and Pharmaceutical Formulations


The salts may be administered to a host, for example, in the case where the drug has anti-thrombogenic activity, to obtain an anti-thrombogenic effect. In the case of larger animals, such as humans, the compounds may be administered alone or in combination with pharmaceutically acceptable diluents, excipients or carriers. The term “pharmaceutically acceptable” includes acceptability for both human and veterinary purposes, of which acceptability for human pharmaceutical use is preferred.


The salts of the disclosure may be combined and/or co-administered with any cardiovascular treatment agent. There are large numbers of cardiovascular treatment agents available in commercial use, in clinical evaluation and in pre-clinical development, which could be selected for use with a product of the disclosure for the prevention of cardiovascular disorders by combination drug therapy. Such agent can be one or more agents selected from, but not limited to several major categories, namely, a lipid-lowering drug, including an IBAT (ileal Na+/bile acid cotransporter) inhibitor, a fibrate, niacin, a statin, a CETP (cholesteryl ester transfer protein) inhibitor, and a bile acid sequestrant, an anti-oxidant, including vitamin E and probucol, a IIb/IIIa antagonist (e.g. abciximab, eptifibatide, tirofiban), an aldosterone inhibitor (e.g. spirolactone and epoxymexrenone), an adenosine A2 receptor antagonist (e.g. losartan), an adenosine A3 receptor agonist, a beta-blocker, acetylsalicylic acid, a loop diuretic and an ACE (angiotensin converting enzyme) inhibitor.


The salts of the disclosure may be combined and/or co-administered with any antithrombotic agent with a different mechanism of action, such as the antiplatelet agents acetylsalicylic add, tidopidine, clopidogrel, thromboxane receptor and/or synthetase inhibitors, prostacyclin mimetics and phosphodiesterase inhibitors and ADP-receptor (P2 T) antagonists.


The products of the disclosure may further be combined and/or co-administered with thrombolytics such as tissue plasminogen activator (natural, recombinant or modified), streptokinase, urokinase, prourokinase, anisoylated plasminogen-streptokinase activator complex (APSAC), animal salivary gland plasminogen activators, and the like, in the treatment of thrombotic diseases, in particular myocardial infarction.


The salts of the disclosure may be combined and/or co-administered with a cardioprotectant, for example an adenosine A1 or A3 receptor agonist.


There is also provided a method for treating an inflammatory disease in a patient that comprises treating the patient with a product of the disclosure and an NSAID, e.g., a COX-2 inhibitor. Such diseases include but are not limited to nephritis, systemic lupus, erythematosus, rheumatoid arthritis, glomerulonephritis, vasculitis and sarcoidosis. Accordingly, the anti-thrombotic salts of the disclosure may be combined and/or co-administered with an NSAID.


Typically, therefore, the salts described herein may be administered to a host to obtain a thrombin-inhibitory effect, or in any other thrombin-inhibitory or anti-thrombotic context mentioned herein.


Actual dosage levels of active ingredients in the pharmaceutical compositions of this disclosure may be varied so as to obtain an amount of the active compound(s) that is effective to achieve the desired therapeutic response for a particular patient, composition, and mode of administration (referred to herein as a “therapeutically effective amount”). The selected dosage level will depend upon the activity of the particular compound, the severity of the condition being treated and the condition and prior medical history of the patient being treated. However, it is within the skill of the art to start doses of the compound at levels lower than required for to achieve the desired therapeutic effect and to gradually increase the dosage until the desired effect is achieved.


According to a further aspect there is provided a parenteral formulation including a salt as described herein. The formulation may consist of the salt alone or it may contain additional components, in particular the salt may be in combination with a pharmaceutically acceptable diluent, excipient or carrier, for example a tonicity agent for the purpose of making the formulation substantially isotonic with the body of the subject to receive the formulation, e.g. with human plasma. The formulation may be in ready-to-use form or in a form requiring reconstitution prior to administration.


It is currently contemplated that, in the case of parenteral administration, for example i.v. administration, of salts of TRI 50c, the salts might for instance be administered in an amount of from 0.5 to 2.5 mg/Kg e.g. over a maximum period of 72 hours, calculated as TRI 50c. Other salts might be administered in equivalent molar amounts. The disclosure is not limited to administration in such quantities or regimens and includes dosages and regimens outside those described in the previous sentence.


Parenteral preparations can be administered by one or more routes, such as intravenous, subcutaneous, intradermal and infusion; a particular example is intravenous. A formulation disclosed herein may be administered using a syringe, injector, plunger for solid formulations, pump, or any other device recognized in the art for parenteral administration.


Liquid dosage forms for parenteral administration may include solutions, suspensions, liposome formulations, or emulsions in oily or aqueous vehicles. In addition to the active compounds, the liquid dosage forms may contain other compounds. Tonicity agents (for the purpose of making the formulations substantially isotonic with the subject's body, e.g. with human plasma) such as, for instance, sodium chloride, sodium sulfate, dextrose, mannitol and/or glycerol may be optionally added to the parenteral formulation. A pharmaceutically acceptable buffer may be added to control pH. Thickening or viscosity agents, for instance well known cellulose derivatives (e.g. methylcellulose, carboxymethylcellulose, hydroxyethylcellulose and hydroxypropylmethylcellulose), gelatin and/or acacia, may optionally be added to the parenteral formulation.


Solid dosage forms for parenteral administration may encompass solid and semi-solid forms and may include pellets, powders, granules, patches, and gels. In such solid dosage forms, the active compound is typically mixed with at least one inert, pharmaceutically acceptable excipient or carrier.


The disclosed salts may be presented as solids in finely divided solid form, for example they may be milled or micronised.


The formulations may also include antioxidants and/or preservatives. As antioxidants may be mentioned thiol derivatives (e.g. thioglycerol, cysteine, acetylcysteine, cystine, dithioerythreitol, dithiothreitol, glutathione), tocopherols, butylated hydroxyanisole, butylated hydroxytoluene, sulfurous acid salts (e.g. sodium sulfate, sodium bisulfite, acetone sodium bisulfite, sodium metabisulfite, sodium sulfite, sodium formaldehyde sulfoxylate, sodium thiosulfate) and nordihydroguaiaretic acid. Suitable preservatives may for instance be phenol, chlorobutanol, benzylalcohol, methyl paraben, propyl paraben, benzalkonium chloride and cetylpyridinium chloride.


The parenteral formulations may be prepared as large volume parenterals (LVPs), e.g. larger than 100 ml, more particularly about 250 ml, of a liquid formulation of the active compound. Examples of LVPs are infusion bags. The parenteral formulations may alternatively be prepared as small volume parenterals (SVPs), e.g. about 100 ml or less of a liquid formulation of the active compound. Examples of SVPs are vials with solution, vials for reconstitution, prefilled syringes for injection and dual chamber syringe devices.


The formulations of the disclosure include those in which the salt is an alkali metal salt, for example a lithium, sodium or potassium salt, of which sodium salts may be mentioned as particular salts. Another class of formulations contains aminosugar salts of the disclosed boronic adds, for example N-methyl-D-glucamine salts. The salts mentioned in this paragraph may be administered as solutions in water, typically containing one or more additives, for example isotonicity agent(s) and/or antioxidant(s). A suitable way to store the salts is in solid form, for example as dry powder, and to make them up into solutions for administration prior to administration.


One class of formulations disclosed herein is intravenous formulations. For intravenously administered formulations, the active compound or compounds can be present at varying concentrations, with a carrier acceptable for parenteral preparations making up the remainder. Particularly, the carrier is water, particularly pyrogen free water, or is aqueous based. Particularly, the carrier for such parenteral preparations is an aqueous solution comprising a tonicity agent, for example a sodium chloride solution.


By “aqueous based” is meant that formulation comprises a solvent which consists of water or of water and water-miscible organic solvent or solvents; as well as containing a salt of disclosure in dissolved form, the solvent may have dissolved therein one or more other substances, for example an antioxidant and/or an isotonicity agent. As organic cosolvents may be mentioned those water-miscible solvents commonly used in the art, for example propyleneglycol, polyethyleneglycol 300, polyethyleneglycol 400 and ethanol. Preferably, organic co-solvents are only used in cases where the active agent is not sufficiently soluble in water for a therapeutically effective amount to be provided in a single dosage form. As previously indicated, the disclosure includes formulations of alkali metal salts of the disclosed boronic acids, e.g. TRI 50c, having a solvent which consists of water.


The solubility of the active compound in the present formulations may be such that the turbidity of the formulation is lower than 50 NTU, e.g. lower than 20 NTU such as lower than 10 NTU.


It is desirable that parenteral formulations are administered at or near physiological pH. It is believed that administration in a formulation at a high pH (i.e., greater than 8) or at a low pH (i.e., less than 5) is undesirable. In particular, it is contemplated that the formulations would be administered at a pH of between 6.0 and 7.0 such as a pH of 6.5.


The parenteral formulation may be purged of air when being packaged. The parenteral formulation may be packaged in a sterile container, e.g. vial, as a solution, suspension, gel, emulsion, solid or a powder. Such formulations may be stored either in ready-to-use form or in a form requiring reconstitution prior to administration.


Parenteral formulations according to the disclosure may be packaged in containers. Containers may be chosen which are made of material which is non-reactive or substantially non-reactive with the parenteral formulation. Glass containers or plastics containers, e.g. plastics infusion bags, may be used. A concern of container systems is the protection they afford a solution against UV degradation. If desired, amber glass employing iron oxide or an opaque cover fitted over the container may afford the appropriate UV protection.


Plastics containers such as plastics infusion bags are advantageous in that they are relatively light weight and non-breakable and thus more easily stored. This is particularly the case for Large Volume parenterals.


The intravenous preparations may be prepared by combining the active compound or compounds with the carrier. After the formulation is mixed, it may be sterilized, for example using known methods. Once the formulation has been sterilized, it is ready to be administered or packaged, particularly in dark packaging (e.g. bottles or plastics packaging), for storage. It is envisaged, however, that the disclosed salts might not be stored in solution but as dry solids, particularly a finely divided form such as, for example, a lyophilisate, in order to prolong shelf life; this would of course apply to other parenteral formulations, not only intravenous ones.


The intravenous preparations may take the form of large volume parenterals or of small volume parenterals, as described above.


In a specific embodiment, the present disclosure is directed to products, particularly kits, for producing a single-dose administration unit. The products (kits) may each contain both a first container having the active compound (optionally combined with additives, for example anti-oxidant, preservative and, in some instances, tonicity agent) and a second container having the carrier/diluent (for example water, optionally containing one or more additives, for example tonicity agent). As examples of such products may be mentioned single and multi-chambered (e.g. dual-chamber) pre-filled syringes; exemplary pre-filled syringes are available from Vetter GmbH, Ravensburg, Germany. Such dual chamber syringes or binary syringes will have in one chamber a dry preparation including or consisting of the active compound and in another chamber a suitable carrier or diluent such as described herein. The two chambers are joined in such a way that the solid and the liquid mix to form the final solution.


One class of formulations disclosed herein comprises subcutaneous or intradermal formulations (for example formulations for injection) in which the active salt (or active agent combination) is formulated into a parenteral preparation that can be injected subcutaneously or intradermally. The formulation for administration will comprise the active salt and a liquid carrier.


The carrier utilized in a parenteral preparation that will be injected subcutaneously or intradermally may be an aqueous carrier (for example water, typically containing an additive e.g. an antioxidant and/or an isotonicity agent) or a nonaqueous carrier (again one or more additives may be incorporated). As a non-aqueous carrier for such parenteral preparations may be mentioned highly purified olive oil.


The active compound and the carrier are typically combined, for example in a mixer. After the formulation is mixed, it is preferably sterilized, such as with U.V. radiation. Once the formulation has been sterilized, it is ready to be injected or packaged for storage. It is envisaged, however, that the disclosed salts will not be stored in liquid formulation but as dry solids, in order to prolong shelf life.


For making subcutaneous implants, the active salt may suitably be formulated together with one or more polymers that are gradually eroded or degraded when in use, e.g. silicone polymers, ethylene vinylacetate, polyethylene or polypropylene.


Transdermal formulations may be prepared in the form of matrices or membranes, or as fluid or viscous formulations in oil or hydrogels or as a compressed powder pellet. For transdermal patches, an adhesive which is compatible with the skin may be included, such as polyacrylate, a silicone adhesive or polyisobutylene, as well as a foil made of, e.g., polyethylene, polypropylene, ethylene vinylacetate, polyvinylchloride, polyvinylidene chloride or polyester, and a removable protective foil made from, e.g., polyester or paper coated with silicone or a fluoropolymer. For the preparation of transdermal solutions or gels, water or organic solvents or mixtures thereof may be used. Transdermal gels may furthermore contain one or more suitable gelling agents or thickeners such as silicone, tragacanth, starch or starch derivatives, cellulose or cellulose derivatives or polyacrylic acids or derivatives thereof. Transdermal formulations may also suitably contain one or more substances that enhance absorption though the skin, such as bile salts or derivatives thereof and/or phospholipids. Transdermal formulations may be prepared according to a method disclosed in, e.g., B W Barry, “Dermatological Formulations, Percutaneous Absorption”, Marcel Dekker Inc., New York—Basel, 1983, or Y W Chien, “Transdermal Controlled Systemic Medications”, Marcel Dekker Inc., New York—Basel, 1987.


It will be understood from the aforegoing that there are provided pharmaceutical products comprising an alkali metal salt, particularly sodium salt, of a boronic acid of Formula (I) in dry fine particle form, suitable for reconstitution into an aqueous read-to-use parenteral formulation. The alkali metal salt is suitably an acid salt. The alkali metal salt may be in a small volume parenteral unit dosage form. The alkali metal salt may be presented in a form, e.g. dry powder form, suitable for reconstituting as a large volume parenteral. One example is a sodium salt of a boronic acid of Formula (I), particularly TRI 50c, in dry powder form for reconstitution as a liquid intravenous formulation (solution) containing a tonicity agent, particularly sodium chloride. The dry powder form of a salt used in a parenteral formulation may be a lyophilisate. The reconstituted solution may be administered by injection or infusion.


In the case of oral administration, the compounds, particularly the salts of amino- or peptido-boronic acids, may be administered in a form which prevents the salt from contact with the acidic gastric juice, such as enterically coated formulations, which thus prevent release of the salt until it reaches the duodenum.


The enteric coating is suitably made of carbohydrate polymers or polyvinyl polymers, for example. Examples of enteric coating materials include, but are not limited to, cellulose acetate phthalate, cellulose acetate succinate, cellulose hydrogen phthalate, cellulose acetate trimellitate, ethyl cellulose, hydroxypropyl-methylcellulose phthalate, hydroxypropylmethylcellulose acetate succinate, carboxymethyl ethylcellulose, starch acetate phthalate, amylose acetate phthalate, polyvinyl acetate phthalate, polyvinyl butyrate phthalate, styrene-maleic acid copolymer, methyl-acrylate-methacrylic acid copolymer (MPM-05), methylacrylate-methacrylic acid-methylmethacrylate copolymer (MPM-06), and methylmethacrylate-methacrylic acid co-polymer (Eudragit® L & S). Optionally, the enteric coating contains a plasticiser. Examples of the plasticiser include, but are not limited to, triethyl citrate, triacetin, and diethyl phthalate.


It is currently contemplated that, in the case of oral administration of salts of TRI 50c, the salts might for instance be administered in an amount of from 0.5 to 2.5 mg/Kg twice daily, calculated as TRI 50c. Other salts might be administered in equivalent molar amounts. However, the presently described methods are not limited to administration in such quantities or regimens and includes dosages and regimens outside those described in the previous sentence.


According to a further aspect there is provided an oral pharmaceutical formulation including a product as described herein, in admixture with a pharmaceutically acceptable adjuvant, diluent or carrier.


Solid dosage forms for oral administration include capsules, tablets (also called pills), powders and granules. In such solid dosage forms, the active compound is typically mixed with at least one inert, pharmaceutically acceptable excipient or carrier such as sodium citrate or dicalcium phosphate and/or one or more: a) fillers or extenders such as starches, lactose, sucrose, glucose, mannitol and silicic add; b) binders such as carboxymethylcellulose, alginates, gelatin, polyvinylpyrrolidone, sucrose and acacia; c) humectants such as glycerol; d) disintegrating agents such as agar-agar, calcium carbonate, potato or tapioca starch, alginic acid, certain silicates and sodium carbonate; e) solution retarding agents such as paraffin; f) absorption accelerators such as quaternary ammonium compounds; g) wetting agents such as cetyl alcohol and glycerol monostearate; h) absorbents such as kaolin and bentonite clay and i) lubricants such as talc, calcium stearate, magnesium stearate, solid polyethylene glycols, sodium lauryl sulfate and mixtures thereof. In the case of capsules and tablets, the dosage form may also comprise buffering agents. Solid compositions of a similar type may also be employed as fillers in soft and hard-filled gelatin capsules using such excipients as lactose or milk sugar as well as high molecular weight polyethylene glycol, for example.


Suitably, the oral formulations may contain a dissolution aid. The dissolution aid is not limited as to its identity so long as it is pharmaceutically acceptable. Examples include nonionic surface active agents, such as sucrose fatty acid esters, glycerol fatty acid esters, sorbitan fatty acid esters (e.g., sorbitan trioleate), polyethylene glycol, polyoxyethylene hydrogenated castor oil, polyoxyethylene sorbitan fatty acid esters, polyoxyethylene alkyl ethers, methoxypolyoxyethylene alkyl ethers, polyoxyethylene alkylphenyl ethers, polyethylene glycol fatty acid esters, polyoxyethylene alkylamines, polyoxyethylene alkyl thioethers, polyoxyethylene polyoxypropylene copolymers, polyoxyethylene glycerol fatty acid esters, pentaerythritol fatty acid esters, propylene glycol monofatty acid esters, polyoxyethylene propylene glycol monofatty acid esters, polyoxyethylene sorbitol fatty acid esters, fatty acid alkylolamides, and alkylamine oxides; bile acid and salts thereof (e.g., chenodeoxycholic acid, cholic acid, deoxycholic acid, dehydrocholic acid and salts thereof, and glycine or taurine conjugate thereof); ionic surface active agents, such as sodium laurylsulfate, fatty acid soaps, alkylsulfonates, alkylphosphates, ether phosphates, fatty acid salts of basic amino acids; triethanolamine soap, and alkyl quaternary ammonium salts; and amphoteric surface active agents, such as betaines and aminocarboxylic acid salts.


The active compounds may also be in micro-encapsulated form, if appropriate, with one or more of the above-mentioned excipients.


Liquid dosage forms for oral administration include pharmaceutically acceptable emulsions, solutions, suspensions, syrups and elixirs. In addition to the active compounds, the liquid dosage forms may contain inert diluents commonly used in the art such as water or other solvents, solubilizing agents and emulsifiers such as ethyl alcohol, isopropyl alcohol, ethyl carbonate, ethyl acetate, benzyl alcohol, benzyl benzoate, propylene glycol, 1,3-butylene glycol, dimethyl formamide, oils (in particular, cottonseed, groundnut, corn, germ, olive, castor, and sesame oils), glycerol, tetrahydrofurfuryl alcohol, polyethylene glycols and fatty add esters of sorbitan and mixtures thereof. Besides inert diluents, the oral compositions may also include adjuvants such as wetting agents, emulsifying and suspending agents, sweetening, flavouring and perfuming agents. Suspensions, in addition to the active compounds, may contain suspending agents such as ethoxylated isostearyl alcohols, polyoxyethylene sorbitol and sorbitan esters, microcrystalline cellulose, aluminium metahydroxide, bentonite, agar-agar, and tragacanth and mixtures thereof.


The presently disclosed product may be presented as solids in finely divided solid form, for example they may be micronised. Powders or finely divided solids may be encapsulated.


The active compound may be given as a single dose, in multiple doses or as a sustained release formulation.


It will be understood from the aforegoing that there are provided pharmaceutical products comprising an alkaline earth metal salt, particularly calcium salt, of a boronic acid of Formula (IIIa) in dry fine particle form, suitable for oral administration. The alkaline earth metal salt is suitably an acid salt.


EXAMPLES
Guide to the Examples

All the Examples relate to the Novel Products of the disclosure. Specifically, the Examples relate to the different categories mentioned in the “Guide to the Specification” as follows:

    • Examples 1 to 4 and 42 to 44 relate to Synthetic Methods II and thus to the High Purity Products (a class of Novel Product)
    • Examples 5 to 35 and 40 relate to Synthetic Methods I and to the characterisation and testing of the Novel Products made using the techniques of Synthetic Methods I
    • Examples 36 to 39 and 41 contain unpublished material serving to verify that TRI 50c, and hence the Novel Products (including therefore the High Purity Products), are effective in arterial as well as venous contexts.


Examples 1 to 4
Introductory Remarks

Apparatus


Throughout the following procedures of Examples 1 to 4, standard laboratory glassware and, where appropriate, specialised apparatus for handling and transferring of air sensitive reagents are used.


All glassware is heated at 140-160° C. for at least 4 hours before use and then cooled either in a desiccator or by assembling hot and purging with a stream of dry nitrogen.


Solvents


The organic solvents used in the procedures of Examples 1 to 4 are all dry. Suitably, they are dried over sodium wire before use.


Dryness


In the drying procedures of Example 1 to 4, products are tested for dryness (including dryness in terms of organic solvent) by observing weight loss on drying. The following procedure was followed to determine loss on drying: a sample was placed in a vacuum drier and dried at 40° C. at 100 mbar for 2 hours. Products are considered dry when the decrease in weight upon drying is less than 0.5% of the total weight of the starting material.


Examples 1 to 4 describe performance of the following reaction scheme and conversion of the resultant TRI 50c to sodium and calcium salts thereof:
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  • LDA=lithium diisopropylamide
  • LiHMDS=lithium hexamethyldisilazane, also known as lithium bis(trimethylsilyl)amide


Intermediate Cbz-(R)-Phe-(S)-Pro-OH (“Z-DIPIN H” in the above scheme) may be purchased commercially in a form containing about 99.7% (R,S) isomer.


Example 1
Synthesis of TRI 50D

Step 1: Z-DIPIN B


Procedure A


17.8 g (732.5 mmole) magnesium turnings, 0.1 g (0.4 mmole) iodine and 127 ml dry tetrahydrofuran are charged and heated to reflux. Then 15 ml of a solution of 66 g (608 mmole) 1-chloro-3-methoxypropane in 185 ml dry tetrahydrofuran are added and stirred under reflux until the vigorous reaction starts. After the initial exotherm ceases, the solution of 1-chloro-3-methoxypropane is added slowly to maintain gentle reflux until all the magnesium is consumed. After the reaction is finished, the reaction mixture is cooled to ambient temperature and slowly added to a solution of 64.4 g (620 mmole) trimethylborate in 95 ml dry tetrahydrofuran; the latter solution is cooled to below 0° C. and, if it warms up during the course of the reaction, the reaction mixture must be added to it sufficiently slowly to maintain the temperature of this solution below 65° C. Upon complete addition, the reaction mixture is allowed to warm to about 0° C. and stirred for another 60 minutes. Then a solution of 22.4 ml sulfuric acid in 400 ml water is added slowly so as to maintain the temperature below 20° C. The layers are allowed to settle and the phases are separated. The aqueous layer is rewashed three times with 200 ml tert.-butylmethylether. The combined organic layers are allowed to settle and additional water separated from this solution is removed. The organic layer is dried over magnesium sulfate, filtered and evaporated to dryness. The evaporation residue is filtered from the precipitated solid and the filtrate dissolved in 175 ml toluene. 34.8 g (292 mmole) pinacol is charged to the solution followed by stirring at ambient temperature for not less than 10 hours. The solution is evaporated to dryness, dissolved in 475 ml n-heptane and washed three times with 290 ml saturated aqueous solution of sodium hydrogen carbonate. The n-heptane solution is evaporated to dryness and the evaporation residue distilled and the fraction with Bp 40-50° C. at 0.1-0.5 mbar recovered.


Boiling point: 40-50° C./0.1-0.5 mbar


Yield: 40.9 g (70%) Z-DIPIN B (oil)


Procedure B


17.8 g (732.5 mmole) magnesium turnings, 0.1 g (0.4 mmole) iodine and 127 ml dry tetrahydrofuran are charged and heated to reflux. Then 15 ml of a solution of 66 g (608 mmole) 1-chloro-3-methoxypropane in 185 ml dry tetrahydrofuran are added and stirred under reflux until the vigorous reaction starts. After the initial exotherm ceases, the solution of 1-chloro-3-methoxypropane is added slowly to maintain gentle reflux. After the reaction is finished, the reaction mixture is cooled to ambient temperature and slowly added to a solution of 64.4 g (620 mmole) trimethylborate in 95 ml dry tetrahydrofuran, maintaining the temperature of this solution below minus 65° C. Upon complete addition, the reaction mixture is allowed to warm to about 0° C. and stirred for another 60 minutes. Then a solution of 22.4 ml sulfuric acid in 400 ml water is added slowly so as to maintain the temperature below 20° C. The organic solvent is removed by distillation under vacuum. 300 ml n-heptane is charged to the aqueous solution of the evaporation residue followed by addition of 34.8 g (292 mmole) pinacol. The two-phase-mixture is stirred at ambient temperature for not less than 2 hours. After allowing the layers to settle, the aqueous phase is separated. 300 ml n-heptane is charged to the aqueous solution and the two-phase-mixture is stirred at ambient temperature for not less than 2 hours. After allowing the layers to settle, the aqueous phase is separated. The organic layers are combined and washed once with 200 ml water, followed by 200 ml saturated sodium hydrogen carbonate solution and two further washes with 200 ml water each. The n-heptane solution is evaporated to dryness and the evaporation residue distilled and the fraction with Bp 40-50° C. at 0.1-0.5 mbar recovered.


Boiling point: 40-50° C./0.1-0.5 mbar


Yield: 40.9 g (70-85%) Z-DIPIN B (oil)


Step 2: Z-DIPIN C


16.6 g (164 mmole) diisopropylamine and 220 ml tetrahydrofuran are charged and cooled to −30 to −40° C. To this solution 41.8 g (163 mmole) n-butyl lithium, 25% in n-heptane is added, followed by stirring at 0 to −5° C. for one hour. This freshly prepared solution of lithium diisopropylamide is cooled to −30° C. and then added to a solution of 27.9 g (139 mmole) Z-DIPIN B in 120 ml tetrahydrofuran and 35.5 g (418 mmole) dichloromethane at a temperature between −60 and −75° C. The solution is stirred at that temperature for half an hour followed by addition of 480 ml (240 mmole) 0.5N anhydrous Zinc(II)-chloride in tetrahydrofuran or 32.5 g (240 mmole) anhydrous solid Zinc(II)-chloride. After stirring at −65° C. for one hour, the reaction mixture is allowed to warm to ambient temperature and stirred for another 16-18 hours. The reaction mixture is evaporated to dryness (i.e. until solvent is removed) and followed by addition of 385 ml n-heptane. The reaction mixture is washed with 150 ml 5% sulfuric acid, with 190 ml saturated sodium hydrogen carbonate solution, and 180 ml saturated sodium chloride solution. The organic layer is dried over magnesium sulfate, filtered and evaporated to dryness (i.e. until solvent is removed). The oily residue is transferred into the next step without further purification.


Yield: 19 g (55%) Z-DIPIN C


Step 3: Z-DIPIN D


To a solution of 23.8 g (148 mmole) hexamethyldisilazane in 400 ml tetrahydrofuran at −15° C. is added 34.7 g (136 mmole) n-butyl lithium, 25% in n-heptane and stirred for one hour. The solution is cooled to −55° C. followed by the addition of 30.6 g (123 mmole) Z-DIPIN C dissolved in 290 ml tetrahydrofuran and 35 ml tetrahydrofuran to this freshly prepared solution of LiHMDS. The solution is allowed to warm to ambient temperature and stirred for 12 hours. The reaction mixture is evaporated to dryness, the evaporation residue dissolved in 174 ml n-heptane, washed with 170 ml water and 75 ml saturated sodium chloride solution. The organic phase is dried over magnesium sulfate, filtered and evaporated to complete dryness (i.e. until solvent is removed). The oily residue is dissolved in 100 g n-heptane. This solution is carried over into the next step without further purification.


Yield: 32.2 g (70%) Z-DIPIN D


Step 4: Z-DIPIN (TRI50b, Crude)


A solution of 26.6 g (71 mmole) Z-DIPIN D in 82.6 g n-heptane is diluted with 60 ml n-heptane and cooled to −60° C. followed by introduction of 10.5 g (285 mmole) hydrogen chloride. The reaction mixture is subsequently evacuated and flushed with nitrogen, while the temperature is increased in increments of about 20° C. to ambient temperature. The solvent is removed from the oily precipitate and replaced several times by 60 ml fresh n-heptane. The oily residue is dissolved in 60 ml tetrahydrofuran (Solution A).


To a different flask 130 ml tetrahydrofuran, 24.5 g (61.5 mmole) Z-D-Phe-Pro-OH and 6.22 g (61.5 mmole) N-methylmorpholine are charged and cooled to −20° C. To this solution a solution of 8.4 g (61.5 mmole) isobutylchloroformate in 20 ml tetrahydrofuran is added and stirred for 30 minutes, followed by addition of Solution A at −25° C. Upon complete addition, up to 16 ml (115 mmole) triethylamine is added to adjust the pH to 9-10, measured using a pH stick. The reaction mixture is allowed to warm to ambient temperature and stirred for 3 hours, still under nitrogen. The solvent is evaporated to dryness and the evaporation residue dissolved in 340 ml tert.-butylmethylether (t-BME). The solution of Z-DIPIN in t-BME is washed twice with 175 ml 1.5% hydrochloric acid. The combined acidic washes are given a rewash with 175 ml t-BME. The combined organic layers are washed with 175 ml water, with 175 ml saturated sodium hydrogen carbonate solution, with 175 ml 25% sodium chloride solution, dried over magnesium sulfate and filtered. This solution is carried over into the next step without further purification.


Yield: 29.9 g (80%) Z-DIPIN


Example 2
Synthesis of TRI 50d (Diethanolamine Adduct of TRI 50c)

The starting material used in this Example is the solution of TRI 50b (“Z-DIPIN”) obtained in Example 1. The solution is carried forward to the synthesis of TRI 50d without further purification. The solution of Z-DIPIN in t-BME (containing 7.0 g (11.5 mmole) (R,S,R) TRI 50b, calculated based on HPLC results of Z-DIPIN) is evaporated to dryness and the evaporation residue dissolved in 80 ml diethylether. 1.51 g (14.4 mmole) diethanolamine is added and the mixture heated at reflux for at least 10 hours, during which process the product precipitates. The suspension is cooled to 5-10° C., filtered and the filter residue washed with diethylether.


To improve chiral and chemical purity the wet filter cake (7 g) is dissolved in 7 ml dichloromethane, cooled to 0-5° C. and the product precipitated by addition of 42 ml diethylether and filtered. The isolated wet product is dried at 35° C. in vacuum or at least 4 hours, until day.


Yield: 5.5 g (80%) Tri50d


Melting Point: 140-145° C.


Example 3
Preparation of Sodium Salt of TRI 50c

1.5 kg (2.5 mole) TRI 50d from Example 2 is dissolved in 10.5 L dichloromethane. 11 L 2% hydrochloric acid is added and the mixture is stirred for at most 30 minutes (optimally about 20 minutes) at room temperature. A precipitate forms in the organic phase. After stirring, the layers are allowed to settle and separated. The aqueous layer is rewashed twice with 2.2 L dichloromethane. The combined organic layers are washed with a solution of 625 g ammonium chloride in 2.25 L water. (The ammonium chloride buffers the pH of the aqueous extractions to be within a range of from about pH 1-2 to about pH 4-5, as strongly acidic conditions might cleave peptide bonds). The organic phase is dried over magnesium sulfate, filtered and the filtrate evaporated to dryness. An assay of the free boronic acid is performed (by the RP HPLC method of Example 43 for at most 30 mins (optionally about 20 min) at room temperature) and the amounts of the solvents and base for conversion of the acid to the salt are calculated. If 2.5 mol of the free acid is obtained, the evaporation residue is dissolved in 5 L acetonitrile followed by addition of a solution of 100 g (2.5 mole) sodium hydroxide as a 5% solution in 2.2 L water. The solution is stirred for two hours at ambient temperature (e.g. 15-30° C., optimally room temperature) and then evaporated in vacuum (of ca. 10 mmHg) at a temperature not exceeding 35° C. The evaporation residue is repeatedly dissolved in 3.5 L fresh acetonitrile and evaporated to dryness to remove traces of water. If the evaporation residue is dry, it is dissolved in 3 L acetonitrile (or alternatively in 6 L THF) and slowly added to a mixture of 32 L n-heptane and 32 L diethylether. The addition is performed slowly enough to avoid lumping or sticking of the product and is carried out over a period of not less than 30 minutes. The precipitated product is filtered off, washed with n-heptane and dried under vacuum at a temperature initially of about 10° C. and then increasing to a limit of about 35° C., until dry.


Yield: 1.0 kg (70%) Tri50c sodium salt.


Example 4
Preparation of Calcium Salt of TRI 50c

1.5 kg (2.5 mole) TRI 50d from Example 2 is dissolved in 10.5 L dichloromethane. 11 L 2% hydrochloric acid is added and the mixture is stirred for at most 30 minutes (optimally about 20 minutes) at room temperature. After stirring the layers are allowed to settle and separated. The aqueous layer is given a rewashed twice with 2.2 L dichloromethane. The combined organic layers are washed with a solution of 625 g ammonium chloride in 2.25 L water. The organic phase is dried over magnesium sulfate, filtered and the filtrate evaporated to dryness. An assay of the free boronic add is performed and the amounts of the solvents and base for conversion of the acid to the salt are calculated. If 2.5 mol of the free acid is obtained, the evaporation residue is dissolved in 5 L acetonitrile followed by addition of a suspension of 93 g (1.25 mole) calcium hydroxide in 1 L water. The solution is stirred for two hours at ambient temperature (e.g. 15-30° C., optimally room temperature) and then evaporated under vacuum (of ca. 10 mmHg) at a temperature initially of about 10° C. and then increasing to a limit of about 35° C. The evaporation residue is repeatedly dissolved in 3.5 L fresh acetonitrile and evaporated to dryness to remove traces of water. If the evaporation residue is dry, it is dissolved in 6 L tetrahydrofuran and slowly added to a mixture of 32 L n-heptane and 32 L diethylether. The addition is performed slowly enough to avoid lumping or sticking of the product and is carried out over a period of not less than 30 minutes. The precipitated product is filtered off, washed with n-heptane and dried under vacuum (of ca. 10 mmHg) at a temperature below 35° C. until dry.


Yield: 0.98 kg (70%) Tri50c calcium salt.


The procedures of Examples 1 to 4 may be scaled up and, if operated carefully, will produce highly pure salts. In the diethanolamine precipitation step it is important to use 1.25 equivalents of diethanolamine per equivalent of (R,S,R) TRI 50b. In the hydrolysis of the diethanolamine ester, it is important to avoid excessively long contact with the aqueous acid. Likewise the TRI 50b should be synthesised via the Grignard reaction to Z-DIPIN A.


Example 5
Alternative Conversion of TRI 50B to TRI 50C

The synthetic procedures described in this and subsequent synthetic examples were generally performed under nitrogen and using dry solvents as supplied from commercial sources.

  • 1. Approximately 300 g of TRI 50b, obtained by the HPLC purification of racemic TRI 50b) were dissolved in approximately 2.5 L diethylether. It is estimated that different batches of TRI 50b had isomeric purities ranging from 85% R,S,R to in excess of 95% R,S,R.
  • 2. Approximately 54 ml diethanolamine were added (1:1 stoichiometry with total TRI 50b content), and the mixture was refluxed at 40° C.
  • 3. The precipitated product was removed, washed several times with diethylether and dried.
  • 4. The dry product was dissolved in CHCl3. Hydrochloric add (pH 1) was added and the mixture was stirred approximately 1 h at room temperature.
  • 5. The organic layer was removed and washed with NH4Cl solution.
  • 6. The organic solvent was distilled off and the residual solid product was dried.


Typical yield: Approximately 230 g


Example 6
Preparation of Lithium Salt of TRI50C

Cbz-Phe-Pro-BoroMpg-OH obtained by the method of Example 5 (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added LiOH as a 0.2M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant oil/tacky liquid is redissolved in 500 ml distilled water necessary with light warming for about 20 minutes. The solution is filtered through filter paper and evacuated to dryness, again with the temperature of the solution not exceeding 37° C. The resultant product is dried under vacuum overnight to normally yield a white brittle solid.


The salt was then dried under vacuum over silica to constant weight (72 h).


Yield 17.89 g.


Microanalysis:

C % FoundH % FoundN % FoundB % FoundMetal % Found(Calc.)(Calc.)(Calc.)(Calc.)(Calc.)57.146.607.342.07Li 1.26(61.03)(6.64)(7.90)(2.03)(1.31)


Example 7
UV/Visible Spectra of Lithium Salt of TRI50C

UV/Visible spectra of the salt resulting from the procedure of Example 6 were recorded in distilled water at 20° C. from 190 nm to 400 nm. The salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=εcl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


Extinction coeffident: 451


Example 8
Aqueous Solubility of Lithium Salt of TRI50C

The salt used in this Example was made using a modification of the process described in Example 6. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt left a white residue of undissolved material. The lithium salt was comparatively soluble and so was redissolved at 50 mg/ml in the same manner previously described.


Solubility when dissolved at 25 mg/ml: 43 mM (23 mg/ml).


Solubility when dissolved at 50 mg/ml: 81 mM (43 mg/ml).


Example 9
Preparation of Sodium Salt of TRI50C

Cbz-Phe-Pro-BoroMpg-OH obtained by the method of Example 5 (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added NaOH as a 0.2M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant oil/tacky liquid is redissolved in 500 ml distilled water with light warming for about 15-20 minutes. The solution is filtered through filter paper and evacuated to dryness, again with the temperature of the solution not exceeding 37° C. The resultant product is dried under vacuum overnight to normally yield a white brittle solid. The product may be present as an oil or tacky solid due to residual water, in which case it is dissolved in ethyl acetate and evacuated to dryness to produce the product as a white solid.


The salt was then dried under vacuum over silica to constant weight (72 h).


Yield: Over 50%.


Microanalysis:

C % FoundH % FoundN % FoundB % FoundMetal % Found(Calc.)(Calc.)(Calc.)(Calc.)(Calc.)59.936.477.311.91Na 3.81(59.24)(6.44)(7.67)(1.98)  (4.20)


Example 10
UV/Visible Spectra of Sodium Salt of TRI50C

UV/Visible spectra of the sodium salt resulting from the procedure of Example 9 were recorded in distilled water at 20° C. from 190 nm to 400 nm. The salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=εcl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


Extinction coefficient: 415.


Example 11
Aqueous Solubility of Sodium Salt of TRI50C

The salt used in this Example was made using a modification of the process described in Example 9. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt left a white residue of undissolved material. The sodium salt was comparatively soluble and so was redissolved at 50 mg/ml in the same manner previously described.


Solubility when dissolved at 25 mg/ml: 44 mM (25 mg/ml).


Solubility when dissolved at 50 mg/ml: 90 mM (50 mg/ml).


Example 12
Preparation of Potassium Salt of TRI50C

Cbz-Phe-Pro-BoroMpg-OH obtained by the method of Example 5 (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added KOH as a 0.2M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant oil/tacky liquid is redissolved in 1 L distilled water with warming to 37° C. for about 2 hours. The solution is filtered through filter paper and evacuated to dryness, again with the temperature of the solution not exceeding 37° C. The resultant product is dried under vacuum overnight to normally yield a white brittle solid.


Yield: 14.45 mg.


The salt was then dried under vacuum over silica to constant weight (72 h).


Microanalysis:

C % FoundH % FoundN % FoundB % FoundMetal % Found(Calc.)(Calc.)(Calc.)(Caic.)(Calc.)54.846.257.022.01K 4.29(57.55)(6.26)(7.45)(1.92)(6.94)


Example 13
UV/Visible Spectra of Potassium Salt of TRI50C

UV/Visible spectra of the potassium salt resulting from the procedure of Example 12 were recorded in distilled water at 20° C. from 190 nm to 400 nm. TRI50C and the salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=εcl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


Extinction coeffident: 438.


Example 14
Aqueous Solubility of Potassium Salt of TRI50C

The salt used in this Example was made using a modification of the process described in Example 12. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt left a white residue of undissolved material.


Solubility when dissolved at 25 mg/ml: 29 mM (16 mg/ml).


Example 15
Preparation of Zinc Salt of TRI 50C

The relative solubility of zinc hydroxide is such that, if the hydroxide had been used to prepare the corresponding TRI 50c salt using the procedure of Example 6, they would not have resulted in homogeneous salt formation. A new method was therefore developed to prepare the zinc salt, as described in this and the next examples.


TRI 50c sodium salt (2.24 g, 4.10 mM) was dissolved in distilled water (100 ml) at room temperature and zinc chloride in THF (4.27 ml, 0.5M) was carefully added with stirring. A white precipitate that immediately formed was filtered off and washed with distilled water. This solid was dissolved in ethyl acetate and washed with distilled water (2×50 ml). The organic solution was evacuated to dryness and the white solid produced dried over silica in a desiccator for 3 days before microanalysis. Yield 1.20 g.



1H NMR 400 MHz, δH(CD3OD) 7.23-7.33 (20H, m, ArH), 5.14 (4H, m, PhCH2O), 4.52 (4H, m, αCH), 3.65 (2H, m), 3.31 (12H, m), 3.23 (6H, s, OCH3), 2.96 (4H, d, J 7.8 Hz), 2.78 (2H, m), 2.58 (2H, m), 1.86 (6H, m), 1.40 (10H, m).



13C NMR 75 MHz δC(CD3OD) 178.50, 159.00, 138.05, 137.66, 130.54, 129.62, 129.50, 129.07, 128.79, 128.22, 73.90, 67.90, 58.64, 58.18, 56.02, 38.81, 30.06, 28.57, 28.36, 25.29. FTIR (KBr disc) νmax (cm−1) 3291.1, 3062.7, 3031.1, 2932.9, 2875.7, 2346.0, 1956.2, 1711.8, 1647.6, 1536.0, 1498.2, 1452.1, 1392.4, 1343.1, 1253.8, 1116.8, 1084.3, 1027.7, 916.0, 887.6, 748.6, 699.4, 595.5, 506.5.


Example 16
Preparation of Arginine Salt of TRI50C

Cbz-Phe-Pro-BoroMpg-OH obtained by the method of Example 5 (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added arginine as a 0.2M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant oil/tacky liquid is redissolved in 2 L distilled water with warming to 37° C. for 2 hours. The solution is filtered through filter paper and evacuated to dryness, again with the temperature of the solution not exceeding 37° C. The resultant product is dried under vacuum overnight to normally yield a white brittle solid.


The salt was then dried under vacuum over silica to constant weight (72 h).


Yield: 10.54 g.


Microanalysis:

C % FoundH % FoundN % FoundB % Found(Calc.)(Calc.)(Calc.)(Calc.)52.477.1215.251.52(56.65)(7.20)(14.01)(1.54)


Example 17
UV/Visible Spectra of Arginine Salt of TRI 50C

UV/Visible spectra of the salt resulting from the procedure of Example 15 were recorded in distilled water at 20° C. from 190 nm to 400 nm. TRI50C and the salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=ε cl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


Extinction coeffident: 406.


Example 18
Aqueous Solubility of Arginine Salt of TRI50C

The salt used in this Example was made using a modification of the process described in Example 16. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt left a white residue of undissolved material.


Solubility when dissolved at 25 mg/ml: 14 mM (10 mg/ml).


Example 19
Preparation of Lysine Salt of TRI50C

Cbz-Phe-Pro-BoroMpg-OH obtained by the method of Example 5 (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added L-lysine as a 0.2M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant oil/tacky liquid is redissolved in 3 L distilled water with warming to 37° C. for 2 hours. The solution is filtered through filter paper and evacuated to dryness, again with the temperature of the solution not exceeding 37° C. The resultant product is dried under vacuum overnight to normally yield a white brittle solid. The product may be present as an oil or tacky solid (due to residual water), in which case it is then dissolved in ethyl acetate and evacuated to dryness to produce the product as a white solid.


The salt was then dried under vacuum over silica to constant weight (72 h).


Yield: 17.89.


Microanalysis:

C % FoundH % FoundN % FoundB % Found(Calc.)(Calc.)(Calc.)(Calc.)57.037.4310.501.72(59.11)(7.36)(10.44)(1.61)


Example 20
UV/Visible Spectra of Lysine Salt of TRI50C

UV/Visible spectra of the salt resulting from the procedure of Example 19 were recorded in distilled water at 20° C. from 190 nm to 400 nm. TRI50C and the salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=εcl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


Extinction coefficient: 437.


Example 21
Aqueous Solubility of Lysine Salt of TRI50C

The salt used in this Example was made using a modification of the process described in Example 19. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt left a white residue of undissolved material.


Solubility when dissolved at 25 mg/ml: 13 mM (8.6 mg/ml).


Example 22
Preparation of N-Methyl-D-Glucamine Salt of TRI50C

Cbz-Phe-Pro-BoroMpg-OH obtained by the method of Example 5 (20.00 g, 38.1 mM) is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added N-methyl-D-glucamine as a 0.2M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant oil/tacky liquid is redissolved in 500 ml distilled water with light warming for about 20 minutes. The solution is filtered through filer paper and evacuated to dryness, again with the temperature of the solution not exceeding 37° C., or freeze dried. The resultant product is dried under vacuum overnight to normally yield a white brittle solid.


The salt was then dried under vacuum over silica to constant weight (72 h).


Yield: 21.31 g.


Microanalysis:

C % FoundH % FoundN % FoundB % Found(Calc.)(Calc.)(Calc.)(Calc.)56.677.287.741.63(56.67)(7.41)(7.77)(1.50)


Example 23
UV/Visible Spectra of N-Methyl-D-Glucamine Salt of TRI50C

UV/Visible spectra of the salt resulting from the procedure of Example 22 were recorded in distilled water at 20° C. from 190 nm to 400 nm. TRI50C and the salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=εcl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


      Extinction coefficient: 433.


Example 24
Aqueous Solubility of N-Methyl-D-Glucamine Salt of TRI50C

The salt used in this Example was made using a modification of the process described in Example 22. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt was observed to fully dissolve. The salt was comparatively soluble and so was redissolved at 50 mg/ml in the same manner previously described.


Solubility when dissolved at 25 mg/ml: 35 mM (25 mg/ml).


Solubility when dissolved at 50 mg/ml: 70 mM (50 mg/ml).


Example 25
Alternative Preparation of Arginine Salt of TRI50C

The arginine salt is formed simply by adding a slight molar excess of L-arginine to a solution of 0.2-0.3 mmol of TRI50c in 10 ml of ethyl acetate. The solvent is evaporated after one hour, and the residue is triturated twice with hexane to remove excess arginine.


Example 26
First Preparation of Calcium Salt of TRI 50C

Cbz-Phe-Pro-BoroMpg-OH (20.00 g, 38.1 mM) obtained by the method of Example 5 is dissolved in acetonitrile (200 ml) with stirring at room temperature. To this solution is added Ca(OH)2 as a 0.1M solution in distilled water (190 ml). The resultant clear solution is stirred for 2 hours at room temperature and then evacuated to dryness under vacuum with its temperature not exceeding 37° C. The resultant product is a white brittle solid.


The salt was then dried under vacuum over silica to constant weight (72 h).


Yield: 17.69 g.


EXAMPLE 27
Second Alternative Preparation of Calcium Salt of TRI 50C

50.0 g TRI 50c (95.2 mmol) were dissolved under stirring in 250 ml acetonitrile at room temperature and then cooled with an ice bath. To this ice cooled solution 100 ml of an aqueous suspension of 3.5 g (47.6 mmol) calcium hydroxide was added dropwise, stirred for 2.5 hours at room temperature, filtered and the resulting mixture evaporated to dryness, the temperature not exceeding 35° C. The clear yellowish oily residue was redissolved in 200 ml acetone and evaporated to dryness. The procedure of redissolving in acetone was repeated one more time to obtain colourless foam.


This foam was redissolved in 100 ml acetone, filtered and added dropwise to an ice cooled solution of 1100 ml petrol ether 40/60 and 1100 ml diethylether. The resulting colourless precipitate was filtered, washed two times with petrol ether 40/60 and dried under high vacuum, yielding 49.48 g of a colourless solid (92%), with a purity of 99.4% according to an HPLC measurement.


Example 28
UV/Visible Spectra of Calcium Salt of TRI 50C

UV/Visible spectra of the salt resulting from the procedure of Example 26 were recorded in distilled water at 20° C. from 190 nm to 400 nm. TRI 50C and the salt gave λmax at 210 and 258 nm. The weight of the dried salt was then measured for the purposes of calculating the extinction coefficient. The λmax at 258 nm was used. The extinction coefficient was calculated using the formula:—

A=εcl where A is the absorbance

    • C is the concentration
    • l the path length of the UV cell
    • and ε is the extinction coefficient.


Extinction coefficient: 955.


EXAMPLE 29
Aqueous Solubility of Calcium Salt of TRI 50C

The salt used in this Example was made using a modification of the process described in Example 27. The modified process differs from that described in that 100 mg of TRI 50c was used as starting material, the product of the redissolution in water was dried by freeze drying and the filtration was carried out through a 0.2 μm filter. The salt is believed to contain about 85% of R,S,R isomer.


To determine maximum aqueous solubility 25 mg of the dried salt were shaken in water at 37° C., the sample filtered and the UV spectrum measured. The salt left a white residue of undissolved material.


Solubility when dissolved at 25 mg/ml: 5 mM (5 mg/ml).


Example 30
In Vitro Activity of Calcium Salt of TRI 50C

TRI 50c calcium salt was assayed as an inhibitor of human α-thrombin by an amidolytic assay (J. Deadman et al, J. Med. Chem. 38: 15111-1522, 1995, which reports a Ki value of 7 nM for TRI 50b).


The inhibition of human α-thrombin therefore, was determined by the inhibition of the enzyme catalysed hydrolysis of three different concentrations of the chromogenic substrate S-2238.


200 μl of sample or buffer and 50 μl of S-2238 were incubated at 37° C. for 1 minute and 50 μl of human α-thrombin (0.25 NIHμ/ml) was added. The initial rate of inhibited and uninhibited reactions were recorded at 4.5 nm. The increase in optical density was plotted according to the method of Lineweaver and Burke. The Km and apparent Km were determined and Ki was calculated using the relationship.
V=Vmax1+Km[S]·(1+[I]Ki)


The buffer used contained 0.1M sodium phosphate, 0.2M NaCl, 0.5% PEG and 0.02% sodium azide, adjusted to pH 7.5 with orthophosphoric acid.


The samples consist of the compound dissolved in DMSO.


The reader is referred to Dixon, M and Webb, E. C., “Enzymes”, third edition, 1979, Academic Press, the disclosure of which is incorporated herein by reference, for a further description of the measurement of Ki.


TRI 50c calcium salt was observed to have a Ki of 10 nM.


Example 31
Preparation of Magnesium Salt of TRI 50C

TRI 50c (1.00 g, 1.90 mM) was dissolved in methanol (10 ml) and stirred at room temperature. To this solution was added magnesium methoxide (Mg(CH3O)2) in methanol (1.05 ml, 7.84 wt %). This solution was stirred for 2 hours at room temperature filtered and evacuated to 5 ml. Water (25 ml) was then added and the solution evacuated down to dryness to yield a white solid. This was dried over silica for 72 hours before being sent for microanalysis. Yield 760 mg.



1H NMR 300 MHz, δH(CD3C(O)CD3) 7.14-7.22 (20H, m), 6.90 (2H, m), 4.89 (4H, m, PhCH2O), 4.38 (2H, m), 3.40 (2H, br s), 2.73-3.17 (20H, broad unresolved multiplets), 1.05-2.10 (16H, broad unresolved multiplets).



13C NMR 75 MHz δC(CD3C(O)CD3) 206.56, 138.30, 130.76, 129.64, 129.31, 129.19, 129.09, 128.20, 128.04, 74.23, 73.55, 67.78, 58.76, 56.37, 56.03, 48.38, 47.87, 39.00, 25.42, 25.29. FTIR (KBr disc) νmax (cm−1) 3331.3, 3031.4, 2935.3, 2876.9, 2341.9, 1956.1, 1711.6, 1639.9, 1534.3, 1498.1, 1453.0, 1255.3, 1115.3, 1084.6, 1027.6, 917.3, 748.9, 699.6, 594.9, 504.5, 467.8.


EXAMPLE 32
Solubility of TRI50C

The UV/visible spectra of TRI50c resulting from the procedure of Example 5 and its solubility were obtained as described above in relation to the salts. The solubility of TRI50c when dissolved at 50 mg/ml was 8 mM (4 mg/ml).


Example 33
Analysis of Sodium, Calcium, Magnesium and Zinc Salts of (R,S,R) TRI 50C

The following salts were prepared using a boronate:metal stoichiometry of n:1, where n is the valency of the metal, using (R,S,R) TRI 50c of higher chiral purity than that used to prepare the salts described in Examples 8, 11, 14, 18, 21, 24 and 29.


A. Sodium Salt (Product of Example 9)

Analytical dataHPLC or LC/MS: HPLC betabasic C18 Column, CH3CN, WaterEstimated Purity: >95% by UV (λ215 nm)Micro analysis:Calcd.Found.C:59.2459.93H:6.446.47N:7.677.31Other: B:1.981.91Na:4.203.81Physical PropertiesForm: Amorphous solidColour: WhiteMelting Point: N/ASolubility: Soluble in aqueous media ca˜50 mg/mlMw: 547.40


B. Calcium Salt (Product of Example 26)

Analytical dataHPLC or LC/MS: HPLC betabasic C18 Column, CH3CN, WaterEstimated Purity: >95% by UV (λ215 nm)Micro analysis:Calcd.Found.C:59.2755.08H:6.486.43N:7.717.08Other: B:1.992.01Ca:3.683.65Physical PropertiesForm: Amorphous solidColour: WhiteMelting Point: N/ASolubility: Soluble in aqueous media ca˜4 mg/mlMw: 1088.89


C. Magnesium Salt (Product of Example 31)

Analytical dataHPLC or LC/MS: HPLC betabasic C18 Column, CH3CN, WaterEstimated Purity: >90% by UV (λ215 nm)Micro analysis:Calcd.Found.C:60.4457.25H:6.576.71N:7.837.45Other: B:2.012.02Mg:2.262.12Physical PropertiesForm: Amorphous solidColour: WhiteMelting Point: N/ASolubility: Soluble in aqueous media ca˜7 mg/mlMw: 1073.12


D. Zinc Salt (Product of Example 15)

Analytical dataHPLC or LC/MS: HPLC betabasic C18 Column, CH3CN, WaterEstimated Purity: >95% by UV (λ215 nm)Micro analysis:Calcd.Found.C:58.2156.20H:6.336.33N:7.547.18Other: B:1.941.84Zn:5.877.26Physical PropertiesForm: Amorphous solidColour: WhiteMelting Point: N/ASolubility: Soluble in aqueous media ca˜2 mg/mlMw: 1114.18


Notes: The trigonal formula of the acid boronate is used in the calculated microanalyses. It is believed that a lower sodium salt solubility is reported in example 11 because the salt tested in example 11 had lower chiral purity.


Conclusion


The zinc, calcium and magnesium salts have all been prepared with a stoichiometry of one metal ion to two molecules of TRI 50c. The values found for the calcium and magnesium salts are close to and thus consistent with those calculated for this 1:2 stoichiometry. For the zinc salt an excess of zinc was found; nonetheless, the zinc salt comprises a significant proportion of acid boronate. The sodium salt has been prepared with a stoichiometry of one metal ion to one molecule of TRI 50c. The value found for the sodium salt is dose to and thus consistent with that calculated for this 1:1 stoichiometry.


Example 34
Stability

An assay of TRI 50c and its sodium and lysine salts before and after drying.


1. Tabulated Results

TABLE 1CompoundAmount [μg/mL]Purity (% area)TRI 50c dry1000.082.00TRI 50c non-dried947.385.54TRI 50c Na salt dry102498.81TRI 50c Na salt non-dried1005.898.61TRI 50c Lys salt dry813.390.17TRI 50c Lys salt non-dried809.892.25


The purity of the acid was lowered by the drying process but the purity of the salts was less affected; the purity of the sodium salt was not significantly reduced. Large differences in response factors will reduce the actual impurity levels, however.


2. Analytical Procedure


2.1 Sample Preparation


TRI 50c and its Na, Li and Lys salts were weighed into HPLC vials and stored in a desiccator over phosphorus pentoxide for 1 week. For sample analysis, 5 mg of dried and non-dried material was weighed in a 5 mL volumetric flask and dissolved in 1 mL acetonitrile and filled up with demineralised water to 5 mL.


3. Data Evaluation


The quantitative evaluation was performed using an HPLC-PDA method.


4. Analytical Parameters

4.1 Equipment and softwareAutosamplerWaters Alliance 2795PumpWaters Alliance 2795Column ovenWaters Alliance 2795DetectionWaters 996 diode array, MS-ZQ 2000 single quadSoftware versionWaters Millennium Release 4.0


4.2 Stationary Phase

Analytical Column IDS71MaterialX-Terra ™ MS C18, 5 μmSupplierWaters, Eschborn, Germany


Dimensions 150 mm×2.1 mm (length, internal diameter)


4.3 Mobile Phase




  • Aqueous phase: A: H2O+0.1%

  • Organic phase: C: ACN



Gradient Conditions:

TimeFlow% A% C0.000.5901027.00.5109027.10.5901030.00.59010


This example indicates that the salts of the disclosure, particularly the metal salts, e.g. alkali metal salts, are more stable than the acids, notably TRI 50c.


Example 35
In-Vitro Assay as Thrombin Inhibitor of Magnesium Salt of TRI 50C

Thrombin Amidolytic Assay


TRI 50c magnesium salt (TRI 1405) was tested in a thrombin amidolytic assay.


Reagents:


Assay Buffer:




  • 100 mM Na phosphate

  • 200 mM NaCl (11.688 g/l)

  • 0.5% PEG 6000 (5 g/l)

  • 0.02% Na azide

  • pH 7.5



Chromogenic substrate S2238 dissolved to 4 mM (25 mg+10 ml) in water. Diluted to 50 uM with assay buffer for use in assay at 5 μM. (S2238 is H-D-Phe-Pip-Arg-pNA).


Thrombin obtained from HTI, via Cambridge Bioscience, and aliquoted at 1 mg/ml with assay buffer. Dilute to 100 ng/ml with assay buffer and then a further 1 in 3 for use in the assay.


Assay:




  • 110 μl assay buffer

  • 50 ul 5 μg/ml thrombin

  • 20 μl vehicle or compound solution

  • 5 min at 37° C.

  • 20 μl 50 μM S2238

  • Read at 405 nm at 37° C. for 10 minutes and record Vmax


    Results:



The results are presented in FIG. 1.


Discussion:


In this assay the magnesium salt of TRI 50c shows the same activity as TRI 50b as an external control.


Example 36
TRI 50B Inhibition of Platelet Procoagulant Activity

Platelet pro-coagulant activity may be observed as the increase, in rate of activation of prothrombin by factor Xa in the presence of factor Va upon the addition of platelets pretreated with thrombin, caused by thrombin alone, collagen alone or a mixture of thrombin and collagen. This property is due to an increase in anionic phospholipid on the surface of the platelet with concomitant release of microvesicle from the surface. This is an essential physiological reaction and people whose platelets have reduced ability to generate procoagulant activity (Scott syndrome) show an increased tendency for bleeding.


Method:


Washed platelets were treated with either 1.15 nM thrombin, 23 μg/ml collagen or a mixture of both at the same concentration at 37° C. TRI 50b was added either for 1 minute prior to the addition of activator or immediately after the incubation with activator. Platelet procoagulant activity was determined as described previously (Goodwin C A et al, Biochem J. 1995 8, 308: 15-21).


TRI 50b proved to be a potent inhibitor of platelet procoagulant activity with IC50's as summarised below:


Table 2: Influence of TRI 50b on the induction of platelet procoagulant activity by various agonists:

TABLE 2IC50 plus pre-IC50 withoutFold accelerationincubationincubationAgonistwithout TRI 50b(nM)(nM)Thrombin3083000Collagen45200300Thrombin/Collagen110380


Table 2 records, for example, that when platelets were treated with thrombin they caused a 30-fold acceleration of the rate of activation of prothrombin in comparison with control platelets. Treatment with TRI 50 reduced such acceleration by half at the various TRI 50 concentration levels given. The significant potency of TRI 50 is evidenced by the fact that the IC50 values are in the nanomolar range.


TRI 50b does not have an effect on ADP, collagen or epinephrine induced aggregation of washed platelets.


Example 37
Rabbit Extracorporeal Shunt Model

Introduction


The technique describes an animal model in which a platelet rich thrombus is produced. The activity of TRI 50b and heparin are compared.


The carotid artery and jugular vein of anaesthetised rabbits were used to create an extracorporeal circuit containing a suspended foreign surface (silk thread). Thrombus deposition is initiated by creation of high sheer stress turbulent arterial blood flow, platelet activation, followed by coagulation in the presence of thrombogenic surfaces. Histopathological studies have shown that the thrombus is platelet rich.


Materials and Methods


Animals:


NZW rabbits (males 2.5-3.5 kg) were used. The animals were allowed food and water up to the induction of anaesthesia.


Anaesthesia:


Animals were premedicated with fontanel/fluanisone (Hypnorm) 0.15 ml total by intramuscular injection. General anaesthesia was induced with methohexitone (10 mg/ml) to effect, followed by endotracheal intubation. Anaesthesia was maintained with isoflurane (1-2.0%) carried in oxygen/nitrous oxide.


Surgical Preparation:


The animals were placed in dorsal recumbency and the ventral cervical region prepared for surgery. The left carotid artery and right jugular vein were exposed. The artery was cannulated with a large Portex® catheter (yellow gauge), cut to a suitable length. The vein was cannulated with a Silastic® catheter. The shunt comprised of a 5 cm length of ‘auto analyser’ line (purple/white gauge). Joins to the shunt on the arterial side were made with intermediate size Silastic® tubing. The shunt was filled with saline before exposure to the circulation. The right femoral artery was cannulated for the measurement of blood pressure.


Thread Preparation and Insertion:


The central section of the shunt contained a thread 3 centimetres in length. This consisted of 000 gauge Gutterman sewing silk so as to give four strands with a single knot at the end. (The knot section was outside the shunt).


Blood Flow


Blood flow velocity was determined by use of ‘Doppler’ probes (Crystal Biotech). A silastic probe was positioned over the carotid artery at the point of insertion of the arterial catheter. Flow was recorded on a chart recorder using heat sensitive paper.


Results











TABLE 3










THROMBUS WEIGHT
ANTITHROMBOTIC


TREATMENT
DOSE
AFTER 20 minute run
ACTIVITY







Control
N/A
22.4 ± 2.2 mg(n = 5)












TRI 50b
10
mg/kg iv
9.78 ± 1.9 mg(n = 5)
Active



3.0
mg/kg iv
15.3 ± 2.2 mg(n = 5)
Active


HEPARIN
100
u/kg iv
22.9 ± 1.65 mg(n = 4)
Inactive



300
u/kg iv
10.5 ± 1.4 mg(n = 4)
Active (Severe






bleeding)










Discussion


Table 3 shows that, under high arterial shear conditions, a TRI 50b dose of 3 mg/kg to 10 mg/kg iv significantly inhibits thrombus formation without bleeding, whereas a heparin dose within the normal clinical range for treating venous thrombosis (100 u/kg iv heparin) was ineffective. The higher dose of heparin, though active, caused severe bleeding. These results, which show TRI 50b effectively inhibiting arterial thrombosis without causing bleeding, are consistent with TRI 50b inhibiting platelet procoagulant activity. In contrast, the thrombin inhibitor heparin, when administered at an approximately equi-effective dose (in terms of inhibition of arterial thrombosis), produced the severe bleeding normal when thrombin inhibitors are used to treat arterial thrombosis.


Example 38
Comparison of Bleeding Times

The aim of the study was to compare the bleeding times of heparin with TRI 50b in a suitable model. It is accepted that heparin is a poor inhibitor of platelet procoagulant activity (J. Biol. Chem. 1978 Oct. 10; 253(19):6908-16; Miletich J P, Jackson C M, Majerus P W1: J. Clin. Invest. 1983 May; 71(5):1383-91).


Bleeding times were determined in a rat tail bleeding model following intravenous administration of heparin and TRI 50b. The doses employed were chosen on the basis of their efficacy in the rat Wessler and dynamic models and were as follows:

TRI 50b:5 and 10mg/kgHeparin:100units/kg


Materials and Methods


Anaesthesia


Rats were anaesthetised with sodium pentabarbitone at 60 mg/kg (2.0 ml/kg of 30 mg/ml solution by i.p. injection). Supplemental anaesthetic was given ip. as required.


Surgical Preparation


A jugular vein was cannulated for the administration of test compound. The trachea was also cannulated with a suitable cannula and the animals allowed to breathe ‘room air’ spontaneously.


Compound Administration


These were given in the appropriate vehicle at 1.0 ml/kg intravenously. Heparin was administered in saline, whilst TRI 50b was dissolved in ethanol, and then the resultant solution added to water for injection (1 part ethanol to 5 parts water).


Technique


Two minutes following compound administration the distal 2 mm of the animal's tail was sectioned with a new scalpel blade and the tail immersed in warm saline (37° C.) contained in a standard ‘universal’ container, so that the blood stream was clearly visible. The bleeding time recording was started immediately following transection until the cessation of blood flow from the tip of the tail. A period of 30 seconds was allowed after the blood flow from the tail had stopped to ensure that bleeding did not re-commence, if bleeding did start again the recording time was continued for up to a maximum of 45 minutes.


Results


Table 4 gives a summary of the bleeding results and shows the increases above base line values.

TABLE 4Summary table of bleeding resultsBleeding time minTreatment(±SEM)Saline 5.1 ± 0.6Heparin 100 u/kg iv>40*TRI 50b 5 mg/kg iv11.3 ± 1.2TRI 50b 10 mg/kg iv30.4 ± 5.2
*Severe bleeding in all animals, with no cessation after 40 minutes.

SEM = standard error of the mean


Discussion


The results show that TRI 50b was superior to heparin (produced less bleeding) at all doses. It should be noted that when 100 u/kg heparin is compared with 5 mg/kg TRI 50b, heparin-treated animals bled more extensively than those receiving TRI 50b; it was previously established (Example 25) that heparin at a dose of 100 u/kg is a less effective inhibitor of arterial thrombosis than TRI 50b at a dose of 3.0 mg/kg. Heparin is primarily a thrombin inhibitor and a poor inhibitor of platelet procoagulant activity; the results are therefore consistent with TRI 50b exerting anti-coagulant activity by inhibition of platelet coagulant activity in addition to thrombin inhibiting activity.


Example 39
TRI 50B as a Prodrug for TRI 50C: Pharmacokinetics and Absorption

Materials and Methods


Animals


Rats, body weight circa 250-300 g were used. The animals were fasted only on the day of use for the iv stage.

TABLE 5iv phaseTreatmentDose mg/kg ivnTRI 50b1.0 mg/kg3TRI 50c1.0 mg/kg3


Dose


Formulation (TRI 50b/TRI 50c)


These were dosed in a formulation prepared as follows: 48 mg/ml of TRI 50b is dissolved in ethanol: PEG 300 (2:3 vol:vol). Just before administration, 5 volumes of this solution is mixed with 3 volumes of 5% kollidon 17 8F.


i.v. Phase


Both compounds were given at a dose of 1.0 mg/kg iv.


The compounds were dosed in a PEG/ethanol/kollidon formulation which was prepared immediately before, as described immediately under the heading “Dose”: Stock 15.0 mg/ml. This was dosed at 1.33 ml/kg (equivalent to 30 mg/kg).


Blood Sampling


A pre dose sample was taken followed by: 0, 2, 5, 10, 20, 30, 40, 60 and 90 minutes post dose.


Plasma


This was obtained by centrifugation (3000 RPM for 10 min) and stored at −20° C. prior to analysis.


Results


Pharmacokinetic Analysis

TABLE 6i.v. pharmacokinetic dataTRI 50bTRI 50cElimination half life: minutes35minutes36.6minutesArea under curve1.681.48Mean Residence Time46minutes45minutesClearance: ml/min/kg1011.3Volume Distribution Litres/kg0.50.59Max Plasma Concentration (observed)2.242.35


The following results are represented in FIG. 2:



FIG. 2: intravenous phase clearance and kinetics following a single dose of TRI 50b or its free acid (TRI 50c). The figure shows the observed assay data.


Conclusion


The i.v. kinetics were similar for both TRI 50b and TRI 50c. The data are consistent with TRI 50b being rapidly hydrolysed in plasma to TRI 50c and with TRI 50c being the active principle.


The results of examples 36 to 39 indicate that administration of TRI 50c as a salt will provide a way to treat arterial thrombosis and/or venous thrombosis.


Example 40
Intravenous Administration of TRI 50C Sodium Salt

The pharmacokinetics (PK) and pharmacodynamics (PD) of TRI 50c sodium salt were studied in beagle dogs following intravenous administration.


The PD was measured as thrombin time and APTT using an automated coagulometer. Plasma concentrations were measured using an LCMS/MS method.


TRI 50c monosodium salt (108.8 g) was dissolved in 0.9% sodium chloride (100 ml) and dosed i.v. at 1.0 mg/kg (1.0 ml/kg over 30 seconds). Blood samples were taken into 3.8% tri-sodium citrate (1+8) at pre dose, 2, 5, 10, 20, 30, minutes post dose and then at 1, 2, 3, 4, 6, 8, 12 and 24 hours post dose. Plasma was prepared by centrifugation and frozen at minus 20° C. pending analysis.


Results


The sodium salt was tolerated well with no adverse events for the total duration of the study.


Male and female dogs responded similarly with a pharmacodynamic C max: at 2 minutes (thrombin time of 154 seconds raised from a base line of 14.3 seconds). Thrombin time was 26 seconds at one hour post dose.


There was an exceptionally good therapeutic ratio between the APTT and thrombin clotting time in dogs receiving the sodium salt at a dose of 1.0 mg/kg i.v. Thrombin dotting time was elevated 10.8 times above base line (154.4 seconds from 14.3 seconds) two minutes following dosing, compared to only 1.3 times elevation in the APTT (19 seconds to 25 seconds post dose).


Example 41
Human Clinical Studies

In human clinical volunteer studies with doses of up to 2.5 mg/kg i.v. (dosages which significantly prolong the thrombin clotting time), TRI 50b had no effect on Simplate bleeding time (i.e. bleeding time measured using a Simplate® bleeding time device).


Example 42
Residual n-Heptane of TRI 50C Calcium Salt

Salt prepared following the methods of Examples 1 and 3 was tested by headspace gas chromatography. Data are shown below:

Residual solvents: Headspace gas chromatographyGC Parameter:Column:DB-wax, 30 m, 0.32 mm ID, 5μCarrier Gas:Helium 5.0, 80 kPasDetector:FID, 220° C.Injector Temp:150° C.Operating Conditions:35° C./7 min; 10° C./min up to 80° C./2 min;40° C. up to 180° C./2 minInjection volume:1 mlSplit:OnHeadspace Parameter:Oven temperature:70° C.Needle temperature:90° C.Transfer temperature:100° C.Other parameters:temper time: 15 min, GC-cycle time: 28 min,injection time: 0.03 min, duration: 0.4 min















Calibration Standards: sample weight/dilution






















concentration
area (average,



weight (mg)
volume (ml)
(mg/ml)
n = 3)















standard






n-heptane
103.12
100
1.0312
2757.74756


sample no.


1
100.84
5
20.17


2
99.12
5
19.82


3
100.03
5
20.01










n-heptane









sample
concentration (mg/ml)
content (%)





1
0.0010
0.0048


2
0.0009
0.0044


3
0.0010
0.0050



0.00095
0.005









Example 43
HPLC Chromatograms

TRI 50c monosodium salt made by the method of Examples 1, 2 & 3 and TRI 50c hemicalcium salt made by the method of Examples 1, 2 & 4 were analysed by HPLC chromatography.


1. Method


1.1 Equipment and Software

AutosamplerWaters Alliance 2795PumpWaters Alliance 2795Column ovenWaters Alliance 2795DetectionWaters 2996 diode array, MS-ZQ single quadSoftware versionWaters Millennium 4.0


1.2 Stationary Phase

Analytical Column IDS-71MaterialXTerra ™ MS C18, 5 μmSupplierWaters, Eschborn, GermanyDimension150 mm × 2.1 mm (length, ID)Pre-column IDno pre-column


Xterra MS C18, 5 μm is a column packing material supplied by Waters Corporation, 34 Maple Street, Milford, Mass. 01757, US and local offices, as in years 2002/2003. It comprises hybrid organic/inorganic particles, consisting of spherical particles of 5 μm size, 125 Å pore size and 15.5% carbon load.


1.3 Mobile Phase

Aqueous phase:A: H2O + 0.1% HCOOHOrganic phase:C: ACN
  • H2O═H2O by Ultra Clear water purification system
  • ACN=gradient grade acetonitrile


Gradient Conditions

timeflowgradient[min]A %C %[mL/min]shape0.090.010.00.527.0010.090.00.5linear27.1090.010.00.5linear30.0090.010.00.5linear


1.4 Instrumental Parameters

Flow0.5 mL-min−1Temperature40 ± 5° C.HPLC controlWaters Millennium Release 4.0CalculationWaters Millenium 4.0


2. Parameters


2.1 Wavelength/Retention Time/Response Factors

Table: retention and detection parameter (k′ F:0.5 ml/min, t0 = 0.9 mL/min)responseReciprocalRetTimeλfactorResponseSubstance[min][nm]m/z[area/μg]factorTRI 50c11.68258508.336601Benzyl alcohol3.862258n.d.19600.337Benzaldehyde6.13258n.d.799390.0083Benzoic acid5.52258n.d.59670.111Impurity I11.18258396.178860.745Impurity II13.39258482.225521.196


2.2 Linearity


Linearity Range 4000-10 μg/mL (Detection UV 258 nm)

Table Linearity data UV 258 nmcalibrationareatarget conc.conc. found1solution[μAU's][μg/mL][μg/mL]Tri 50c53531020.44Tri 50c53011020.37Tri 50c65809100113.35Tri 50c66365100114.17Tri 50c172019250270.43Tri 50c162587250256.48Tri 50c339503500518.13Tri 50c326912500499.51Tri 50c6592571000991.02Tri 50c6474951000973.63Tri 50c132237120001971.72Tri 50c130519620001946.32Tri 50c272441040004045.24
1recalculated with linear equation


Linear Equation Parameters:
  • Y=6.75e+002 X−8.45e+003
  • r=0.99975
  • r2=0.99950


Linearity Range 10-0.10 μg/mL (Detection SIR m/z 508.33)

TABLELinearity data SIR 508.33calibrationmean areatarget conc.conc. found1solution[μAU's][μg/mL][μg/mL]Tri 50c21888600.010.022Tri 50c27028390.010.045Tri 50c38172260.10.094Tri 50c38337990.10.095Tri 50c2315355010.947Tri 50c2464689211.013Tri 50c223007852109.765Tri 50c2337530431010.239
1recalculated with linear equation


Equation Parameter
  • Y=2.27e+007 X+1.69e+006
  • r=0.99958
  • r2=0.99916


    2.3 Quantitation Limit


The quantitation limit was determined using the signal to noise ratio criterion S/N>19,

UV 258 nm:10μg/mLM/z 508.3:0.1μg/mL


2.4 Precision

Target concentrationAmountRetention timeInjection[μg/mL]Area[μg/mL][min]1250165805261.2411.6902250168644265.4411.6623250167858264.2711.6864250166947262.9311.6925250166925262.8911.6796250166294261.9611.696Mean167079263.1211.684Std. Dev.10331.5280.01% RSD0.60.60.1


2.5 Robustness

Table: robustness data; Standard 250 μg/mLaqueous solution (containing <1% ACN)calibrationtemp./timerecoverysolution[° C./h]area [μAU's][%]250μg/mL Tri50c172020250μg/mL Tri50cC. 16 h16629496.672.5μg/mL TRI50c880348912.5μg/mL TRI50c37°C. 4 h88833175100.9


REFERENCES



  • 1. ICH HARMONISED TRIPARTITE GUIDELINE. TEXT ON VALIDATION OF ANALYTICAL PROCEDURES Recommended for Adoption at Step 4 of the ICH Process on 27 Oct. 1994 by the ICH Steering Committee

  • 2. FDA Reviewer Guidance. Validation of chromatographic methods. Center for Drug Evaluation and Research. November 1994

  • 3. USP 23. <621> Chromatography

  • 4. L. Huber. Validation of analytical Methods. LC-GC International February 1998

  • 5. Handbuch Validierung in der Analytik. Dr. Stavros Kromidas (Ed.) Wiley-VCH Verlag. 2000. ISBN 3-527-29811-8


    3. Results


    3.1 Sample Name: TRI 50c Monosodium Salt



Injection Volume: 10 μL

Ret TimeAreaAreaPeak HeightName(Min)%[μAU's]μAUTRI 50c12.136100.0000604.2722832.05369


3.2 Sample Name: TRI 50c Hemicalcium Salt


Injection Volume: 10 μL

Ret TimeAreaAreaPeak HeightName(Min)%[μAU's]μAUTRI 50c12.126100.0000597.1127932.29640


The disclosed methods have been used to obtain salts substantially free of C—B bond degradation products, in particular salts containing no such products in an amount detectable by HPLC, specifically the method of Example 43. The disclosed methods have been used to obtain salts substantially free of Impurity I, in particular containing no Impurity I in an amount detectable by HPLC, specifically by the method of Example 43. The disclosed methods have been used to obtain salts substantially free of Impurity IV, in particular containing no Impurity IV in an amount detectable by HPLC, specifically by the method of Example 43.


Example 44
Determination of Diastereomeric Excess

TRI 50b, crude, contains three chiral centres. Two of them are fixed by the use of enantiomerically pure amino adds ((R)-Phe and (S)-Pro). The third one is formed during the synthesis. The favoured epimer is the desired TRI 50b, Isomer I (R,S,R-TRI 50b). Both epimers of TRI 50b are clearly baseline separated by the HPLC method, thus allowing determination of the diasteromeric excess (de) of TRI 50b.


TRI 50d is not stable under the conditions applied for HPLC purity determination, but decomposes rapidly on sample preparation to TRI 50c, so that TRI 50d and TRI 50c show the same HPLC traces.


The two isomers of TRI 50c are not baseline separated in HPLC, but both isomers are clearly visible. This becomes obvious, when TRI 50b, crude (mixture of both isomers) is converted with phenylboronic acid to TRI 50c, crude. Both isomers of TRI 50c are observed in HPLC nearly at the same relation as before in TRI 50b, crude.


Upon synthesis of TRI 50d from TRI 50b, crude, only one diastereoisomer is precipitated. In this case HPLC shows only one peak for TRI 50c, where a very small fronting is observed. Precipitation from dichloromethane/diethylether removes the fronting efficiently. The level of removal of Isomer II cannot be quantified by this HPLC method. Therefore samples before reprecipitation and after one and two reprecipitations were esterified with pinacol and the resulting samples of TRI 50b analysed by HPLC. Thus a de of 95.4% was determined for the crude sample. The reprecipitated sample resulted in a de of 99.0% and finally the sample that was reprecipitated twice showed a de of 99.5%.


These results clearly show the preferred precipitation of Isomer I, whereas Isomer II remains in solution.


It will be appreciated from the foregoing that the disclosure provides boronic acid salts useful for pharmaceutical purposes and which feature one or more of the following attributes: (1) improved hydrolytic stability; (2) improved stability against deboronation; and (3), in any event, not suggested by the prior art.


The selection of active ingredient for a pharmaceutical composition is a complex task, which requires consideration not only of biological properties (including bioavailability) but also of physicochemical properties desirable for processing, formulation and storage. Bioavailability itself is dependent on various factors, often including in vivo stability, solvation properties and absorption properties, each in turn potentially dependent on multiple physical, chemical and/or biological behaviours.


The present disclosure includes the subject matter of the following paragraphs:


1. A parenteral pharmaceutical formulation comprising a pharmaceutically acceptable base addition salt of a boronic acid of formula (I):
embedded image

wherein

  • Y comprises a hydrophobic moiety which, together with the aminoboronic acid residue —NHCH(R9)—B(OH)2, has affinity for the substrate binding site of thrombin; and
  • R9 is a straight chain alkyl group interrupted by one or more ether linkages and in which the total number of oxygen and carbon atoms is 3, 4, 5 or 6 or R9 is —(CH2)m—W where m is from 2, 3, 4 or 5 and W is —OH or halogen (F, Cl, Br or I).


2. A formulation of paragraph 1 wherein R9 is an alkoxyalkyl group.


3. A formulation of paragraph 1 or paragraph 2 wherein YCO— comprises an amino acid which binds to the S2 subsite of thrombin, the amino acid being N-terminally linked to a moiety which binds the S3 subsite of thrombin.


4. A formulation of paragraph 1 or paragraph 2 wherein Y is an optionally N-terminally protected dipeptide which binds to the S3 and S2 binding sites of thrombin and the peptide linkages in the acid are optionally and independently N-substituted by a C1-C13 hydrocarbyl optionally containing in-chain or in-ring nitrogen, oxygen or sulfur and optionally substituted by a substituent selected from halo, hydroxy and trifluoromethyl.


5. A formulation of paragraph 4 wherein said dipeptide is N-terminally protected and all the peptide linkages in the acid are unsubstituted.


6. A formulation of paragraph 4 or paragraph 5 wherein the S3-binding amino acid residue is of R configuration, the 52-binding residue is of S configuration, and the fragment —NHCH(R9)—B(OH) is of R configuration.


7. A formulation of any of paragraphs 1 to 6 wherein the boronic add has a Ki for thrombin of about 100 nM or less.


8. A formulation of paragraph 7 wherein the boronic acid has a Ki for thrombin of about 20 nM or less.


9. A formulation in parenteral dosage form of a pharmaceutically acceptable base addition salt of a boronic acid of formula (II):
embedded image

where:

  • X is H (to form NH2) or an amino-protecting group;
  • aa1 is an amino acid having a hydrocarbyl side chain containing no more than 20 carbon atoms and comprising at least one cyclic group having up to 13 carbon atoms;
  • aa2 is an imino acid having from 4 to 6 ring members;
  • R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen (F, Cl, Br or I).


10. A formulation of paragraph 9 wherein aa1 is selected from Phe, Dpa and wholly or partially hydrogenated analogues thereof.


11. A formulation of paragraph 9 wherein aa1 is selected from Dpa, Phe, Dcha and Cha.


12. A formulation of any of paragraphs 9 to 11 wherein aa1 is of R-configuration.


13. A formulation of paragraph 9 wherein aa1 is (R)-Phe (that is, D-Phe) or (R)-Dpa (that is, D-Dpa).


14. A formulation of paragraph 9 wherein aa1 is (R)-Phe.


15. A formulation of any of paragraphs 9 to 14 wherein aa2 is a residue of an imino acid of formula (IV)
embedded image

where R11 is —CH2—, —CH2—CH2—, —S—CH2—, —S—C(CH3)2— or —CH2—CH2—CH2—, which group, when the ring is 5- or 6-membered, is optionally substituted at one or more —CH2— groups by from 1 to 3 C1-C3 alkyl groups.


16. A formulation of paragraph 15 wherein aa2 is of S-configuration.


17. A formulation of paragraph 15 wherein aa2 is an (S)-proline residue.


18. A formulation of paragraph 9, wherein aa1-aa2 is (R)-Phe-(S)-Pro (that is, D-Phe-L-Pro).


19. A formulation of any of paragraphs 9 to 18 wherein R1 is 2-bromoethyl, 2-chloroethyl, 2-methoxyethyl, 3-bromopropyl, 3-chloropropyl or 3-methoxypropyl.


20. A formulation of any of paragraphs 9 to 18 wherein R1 is 3-methoxypropyl.


21. A formulation of any of paragraphs 9 to 20 where X is R6—(CH2)p—C(O)—, R6—(CH2)p—S(O)2—, R6—(CH2)p—NH—C(O)— or R6—(CH2)p—O—C(O)— wherein p is 0, 1, 2, 3, 4, 5 or 6 and R6 is H or a 5 to 13-membered cyclic group optionally substituted by 1, 2 or 3 substituents selected from halogen, amino, nitro, hydroxy, a C5-C6 cyclic group, C1-C4 alkyl and C1-C4 alkyl containing, and/or linked to the cyclic group through, an in-chain 0, the aforesaid alkyl groups optionally being substituted by a substituent selected from halogen, amino, nitro, hydroxy and a C5-C6 cyclic group.


22. A formulation of paragraph 21 wherein said 5 to 13-membered cyclic group is aromatic or heteroaromatic.


23. A formulation of paragraph 22 wherein said 5 to 13-membered cyclic group is phenyl or a 6-membered heteroaromatic group.


24. A formulation of any of paragraphs 9 to 20 wherein X is R6—(CH2)p—C(O)— or R6—(CH2)p—O—C(O)— and p is 0 or 1.


25. A formulation of any of paragraphs 9 to 20 wherein X is benzyloxycarbonyl.


26. A formulation of paragraph 9 wherein the boronic acid is of formula (VIII):

X-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2  (VIII).


27. A formulation of any of paragraphs 1 to 26 wherein the salt comprises boronate ions derived from the boronic acid and monovalent counter-ions.


28 A formulation of any of paragraphs 1 to 26 which comprises a salt of the peptide boronic acid with an alkali metal or a strongly basic organic nitrogen-containing compound.


29. A formulation of paragraph 28 wherein the strongly basic organic nitrogen-containing compound is a guanidine, a guanidine analogue or an amine.


30. A formulation of any of paragraphs 1 to 27 wherein the salt is a salt of the boronic acid with a metal.


31. A formulation of any of paragraphs 1 to 26 which comprises a salt of the boronic acid with an alkali metal, an aminosugar, a guanidine or an amine of formula (XI):
embedded image

where n is from 1 to 6, R2 is H, carboxylate or derivatised carboxylate, R3 is H, C1-C4 alkyl or a residue of a natural or unnatural amino acid.


32. A formulation of any of paragraphs 1 to 26 which comprises a salt of the boronic acid with a guanidine or with an amine of formula (XI):
embedded image

where n is from 1 to 6, R2 is H, carboxylate or derivatised carboxylate, R3 is H, C1-C4 alkyl or a residue of a natural or unnatural amino add.


33. A formulation of paragraph 32 which comprises a guanidine salt of the boronic acid.


34. A formulation of paragraph 33 which comprises a salt of the boronic acid with L-arginine or an L-arginine analogue.


35. A formulation of paragraph 34 wherein the L-arginine analogue is D-arginine, or the D- or L-isomers of homoarginine, agmatine [(4-aminobutyl) guanidine], NG-nitro-L-arginine methyl ester, or a 2-amino pyrimidines.


36. A formulation of paragraph 33 which comprises a salt of the boronic acid with a guanidine of formula (VII)
embedded image

where n is from 1 to 6, R2 is H, carboxylate or derivatised carboxylate, R3 is H, C1-C4 alkyl or a residue of a natural or unnatural amino acid.


37. A formulation of paragraph 36, wherein n is 2, 3 or 4.


38. A formulation of paragraph 36 or paragraph 37 where the derivatised carboxylate forms a C1-C4 alkyl ester or amide.


39. A formulation of any of paragraphs 36 to 38 wherein the compound of formula (VII) is of L-configuration.


40. A formulation of paragraph 33 which comprises an L-arginine salt of the peptide boronic add.


41. A formulation of paragraph 32 which comprises a salt of the boronic add with an amine of formula (IX).


42. A formulation of paragraph 41, wherein n is 2, 3 or 4.


43. A formulation of paragraph 41 or paragraph 42 where the derivatised carboxylate forms a C1-C4 alkyl ester or amide.


44. A formulation of any of paragraphs 41 to 43 wherein the amine of formula (IX) is of L-configuration.


45. A formulation of paragraph 41 which comprises an L-lysine salt of the boronic acid.


46. A formulation of any of paragraphs 1 to 26 which comprises an alkali metal salt of the boronic acid.


47. A formulation of paragraph 46 wherein the alkali metal is potassium.


48. A formulation of paragraph 46 wherein the alkali metal is sodium.


49. A formulation of paragraph 46 wherein the alkali metal is lithium.


50. A formulation of any of paragraphs 1 to 26 which comprises an aminosugar salt of the boronic acid.


51. A formulation of paragraph 50 wherein the aminosugar is a ring-opened sugar.


52. A formulation of paragraph 51 wherein the aminosugar is a glucamine.


53. A formulation of paragraph 50 wherein the aminosugar is a cyclic aminosugar.


54. A formulation of any of paragraphs 50 to 53 wherein the aminosugar is N-unsubstituted.


55. A formulation of any of paragraphs 50 to 53 wherein the aminosugar is N-substituted by one or two substituents.


56. A formulation of paragraph 55 wherein the or each substituent is a hydrocarbyl group.


57. A formulation of paragraph 55 wherein the or each substituent is selected from the group consisting of alkyl and aryl moieties.


58. A formulation of paragraph 57 wherein the or each substituent is selected from the group consisting of C1, C2, C3, C4, C5, C6, C7 and C8 alkyl groups.


59. A formulation of any of paragraphs 55 to 58 wherein there is a single N-substituent.


60. A formulation of paragraph 50 wherein the glucamine is N-methyl-D-glucamine.


61. A formulation of any of paragraphs 1 to 60 which comprises boronate ions derived from the peptide boronic acid and has a stoichiometry consistent with the boronate ions carrying a single negative charge.


62. A formulation of any of paragraphs 1 to 60 wherein the salt consists essentially of acid salt (that is, wherein one B—OH group remains protonated).


63. A formulation of any of paragraphs 1 to 62 wherein the salt comprises a boronate ion derived from the peptide boronic acid and a counter-ion and wherein the salt consists essentially of a salt having a single type of counter-ion.


64. A product for use as a parenteral pharmaceutical, comprising a salt of any of paragraphs 1 to 63.


65. A pharmaceutical formulation in parenteral dosage form comprising a salt of any of paragraphs 1 to 63 and a pharmaceutically acceptable diluent, excipient or carrier.


66. A pharmaceutical formulation of paragraph 65 which is adapted for intravenous administration.


67. A pharmaceutical formulation of paragraph 65 which is adapted for subcutaneous administration.


68. A method of inhibiting thrombin in the treatment of disease comprising parenterally administering to a mammal a therapeutically effective amount of an active agent selected from the group consisting of a salt as defined in any of paragraphs 1 to 63.


69. The use of a salt as defined in any of paragraphs 1 to 63 for the manufacture of a parenteral medicament for treating thrombosis.


70. A method of treating venous and/or arterial thrombosis by prophylaxis or therapy, comprising parenterally administering to a mammal suffering from, or at risk of suffering from, arterial thrombosis a therapeutically effective amount of a product selected form the salts defined any of paragraphs 1 to 63.


71. A method of paragraph 70 wherein the disease is an acute coronary syndrome.


72. A method of paragraph 70 wherein the disease is acute myocardial infarction.


73. A method of paragraph 70 wherein the disease is a venous thromboembolic event, selected from the group consisting of deep vein thrombosis and pulmonary embolism.


74. A method for preventing thrombosis in a haemodialysis circuit of a patient, comprising parenterally administering to the patient a therapeutically effective amount of a product selected from the salts defined any of paragraphs 1 to 63.


75. A method for preventing a cardiovascular event in a patient with end stage renal disease, comprising parenterally administering to the patient a therapeutically effective amount of a product selected from the salts defined any of paragraphs 1 to 63.


76. A method for preventing venous thromboembolic events in a patient receiving chemotherapy through an indwelling catheter, comprising administering to the patient a therapeutically effective amount of a product selected from the salts defined any of paragraphs 1 to 63.


77. A method for preventing thromboembolic events in a patient undergoing a lower limb arterial reconstructive procedure, comprising parenterally administering to the patient a therapeutically effective amount of a product selected from the salts defined any of paragraphs 1 to 63.


78. A method of inhibiting platelet procoagulant activity, comprising parenterally administering to a mammal at risk of, or suffering from, arterial thrombosis a therapeutically effective amount of a product selected from the salts defined any of paragraphs 1 to 63.


79. A method of paragraph 78 wherein the disease is an acute coronary syndrome.


80. A method of treating by way of therapy or prophylaxis an arterial disease selected from acute coronary syndromes, cerebrovascular thrombosis, peripheral arterial occlusion and arterial thrombosis resulting from atrial fibrillation, valvular heart disease, arterio-venous shunts, indwelling catheters or coronary stents, comprising parenterally administering to a mammal a therapeutically effective amount of a product selected from the salts defined any of paragraphs 1 to 63.


81. A method of paragraph 80 wherein the disease is an acute coronary syndrome.


82. The use of a salt of any of paragraphs 1 to 63 for the manufacture of a parenteral medicament for a treatment recited in any of paragraphs 76 to 81.


83. A parenteral pharmaceutical formulation comprising a combination of (i) a salt of any of paragraphs 1 to 63 and (ii) a further pharmaceutically active agent.


84. A parenteral pharmaceutical formulation comprising a combination of (i) a salt of any of paragraphs 1 to 63 and (ii) another cardiovascular treatment agent.


85. A formulation of paragraph 84 wherein the other cardiovascular treatment agent comprises a lipid-lowering drug, a fibrate, niacin, a statin, a CETP inhibitor, a bile acid sequestrant, an anti-oxidant, a IIb/IIIa antagonist, an aldosterone inhibitor, an A2 antagonist, an A3 agonist, a beta-blocker, acetylsalicylic acid, a loop diuretic, an ace inhibitor, an antithrombotic agent with a different mechanism of action, an antiplatelet agent, a thromboxane receptor and/or synthetase inhibitor, a fibrinogen receptor antagonist, a prostacyclin mimetic, a phosphodiesterase inhibitor, an ADP-receptor (P2 T) antagonist, a thrombolytic, a cardioprotectant or a COX-2 inhibitor.


86. The use of a salt of any of paragraphs 1 to 63 for the manufacture of a parenteral medicament for treating, for example preventing, a cardiovascular disorder in co-administration with another cardiovascular treatment agent.


87. A method for recovering from ether solution an ester of a boronic acid as defined in any of paragraphs 1 to 26, comprising dissolving diethanolamine in the solution, allowing or causing a precipitate to form and recovering the precipitate.


88. A method of paragraph 79 wherein the ester is a pinacol ester.


89. The method of paragraph 79 or paragraph 80 which further comprises converting, suitably hydrolysing, the precipitated material into the free organoboronic acid.


90. The method of paragraph 89, wherein the conversion comprises contacting the precipitated material with an aqueous acid or base.


91. The method of paragraph 90, wherein the precipitated material is contacted with a concentrated strong inorganic acid.


92. A method for making a boronic acid as defined in any of paragraphs 1 to 26, comprising converting a diolamine reaction product thereof to the acid, suitably hydrolysing the diolamine reaction product to form the acid.


93. The method of paragraph 92, wherein the conversion is carried out as recited in paragraph 82 or paragraph 83.


94. The method of any of paragraphs 87 to 93, which further comprises converting the organoboronic add to a salt thereof.


95. The method of paragraph 94, wherein the salt is as defined in any of paragraphs 2 to 63.


96. The method of paragraph 94 or paragraph 95, which further comprises formulating the salt into a pharmaceutical composition.


97. A product obtainable by (having the characteristics of a product obtained by) reacting in diethylether solution a pinacol ester of a compound of Formula (VIII) as defined in paragraph 26 and diethanolamine.


98. A composition of matter comprising:

    • (i) a species of formula (XII)
      embedded image

      wherein X is H or an amino protecting group, the boron atom is optionally coordinated additionally with a nitrogen atom, and the valency status of the terminal oxygens is open (they may be attached to a second covalent bond, be ionised as —O, or have some other, for example intermediate, status); and, in bonding association therewith
    • (ii) a species of formula (XIII)
      embedded image

      wherein the valency status of the nitrogen atom and the two oxygen atoms is open.


99. A composition of paragraph 98, wherein the terminal oxygen atoms of the species of formula (XII) and the oxygen atoms of the species of formula (XIII) are the same oxygen atoms, i.e. the species of formula (XIII) forms a diol ester with the species of formula (XII).


100. The use of a boronic add as defined in any of paragraphs 1 to 26 as an intermediate to make a salt of any of paragraphs 1 to 63.


101. A method of preparing a salt of any of paragraphs 1 to 63, comprising contacting a boronic acid as defined in any of paragraphs 1 to 26 with a base capable of making such a salt.


102. A peptide boronic acid of formula (II) as defined in any of paragraphs 9 to 26 when of GLP or GMP quality, or when in compliance with GLP (good laboratory practice) or GMP (good manufacturing practice).


103. A composition of matter which is sterile or acceptable for pharmaceutical use, or both, and comprises a peptide boronic acid of formula (II) as defined in any of paragraphs 9 to 26.


104. A composition of matter of paragraph 103 which is in particulate form.


105. A composition of paragraph 103 which is in the form of a liquid, solution or dispersion.


106. An isolated compound which is a peptide boronic acid of formula (VIII):

X-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2  (VIII)

wherein X is H (to form NH2) or an amino-protecting group.


107. A compound of paragraph 106 wherein X is benzyloxycarbonyl.


108. A particulate composition comprising a peptide boronic acid of formula (VIII) as defined in paragraph 106 or paragraph 107.


109. A composition of paragraph 108 consisting predominantly of the peptide boronic acid.


110. A composition of paragraph 109 wherein the peptide boronic acid forms at least 75% by weight of the composition.


111. A composition of paragraph 110 wherein the peptide boronic acid forms at least 85% by weight of the composition.


112. A composition of paragraph 111 wherein the peptide boronic acid forms at least 95% by weight of the composition.


113. A composition of any of paragraphs 108 to 112 which is sterile.


114. A composition of any of paragraphs 108 to 113 wherein the peptide boronic acid is in finely divided form.


115. A liquid composition consisting of, or consisting essentially of, a peptide boronic acid of formula (II) as defined in any of paragraphs 9 to 26 and liquid vehicle in which it is dissolved or suspended.


116. A liquid composition of paragraph 115 wherein the liquid vehicle is an aqueous medium, e.g. water.


117. A liquid composition of paragraph 115 wherein the liquid vehicle is an alcohol, for example methanol, ethanol, isopropanol or another propanol, another alkanol or a mixture of the aforegoing.


118. A liquid composition of any of paragraphs 115 to 117 which is sterile.


119. A parenteral medicament comprising a salt of a boronic acid which is a selective thrombin inhibitor and has a neutral aminoboronic acid residue capable of binding to the thrombin S1 subsite linked through a peptide linkage to a hydrophobic moiety capable of binding to the thrombin S2 and S3 subsites, the salt comprising a cation having a valency n and having an observed stoichiometry consistent with a notional stoichiometry (boronic acid:cation) of n:1.


120. A medicament of paragraph 119 wherein the boronic acid has a Ki for thrombin of about 100 nM or less.


121. A medicament of paragraph 119 wherein the boronic acid has a Ki for thrombin of about 20 nM or less.


122. A parenteral medicament comprising a sodium salt of Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2.


123. A method of stabilising an organoboronic acid, comprising providing it in the form of a salt thereof.


124. A method of formulating an organoboronic acid drug to increase the stability of the drug species, comprising formulating the add in the form of an add salt thereof.


125. A pharmaceutical product comprising a sealed container containing in the form of a finely divided solid, ready for reconstitution to form a liquid parenteral formulation, a therapeutically effective amount of a boronate salt which consists essentially of a single pharmaceutically acceptable base addition salt of a boronic acid formula (II):
embedded image

where:

  • X is H (to form NH2) or an amino-protecting group;
  • aa1 is an amino acid of R-configuration having a hydrocarbyl side chain containing no more than 20 carbon atoms and comprising at least one cyclic group having up to 13 carbon atoms;
  • aa2 is an imino acid of S-configuration having from 4 to 6 ring members;
  • C* is a chiral centre of R-configuration; and
  • R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen (F, Cl, Br or I).


126. The product of paragraph 125 wherein:

  • X is R6—(CH2)p—C(O)—, R6—(CH2)p—S(O)2—, R6—(CH2)p—NH—C(O)— or R6—(CH2)p—O—C(O)— wherein p is 0, 1, 2, 3, 4, 5 or 6 and R6 is H or a 5 to 13-membered cyclic group optionally substituted by 1, 2 or 3 substituents selected from halogen, amino, nitro, hydroxy, a C5-C6 cyclic group, C1-C4 alkyl and C1-C4 alkyl containing, and/or linked to the cyclic group through, an in-chain O, the aforesaid alkyl groups optionally being substituted by a substituent selected from halogen, amino, nitro, hydroxy and a C5-C6 cyclic group;
  • aa1 is selected from D-Phe, D-Dpa, D-Cha and Dcha;
  • aa2 is Pro; and
  • R1 is 2-ethoxyethyl or 3-methoxypropyl.


127. A pharmaceutical formulation adapted for parenteral administration, whether directly or after combining with a liquid, and comprising

    • a) a first species selected from (a) boronic acids of formula (I), (b) boronate anions thereof, and (c) any equilibrium form of the aforegoing (e.g. an anhydride):
      embedded image
    • wherein
    • Y comprises a hydrophobic moiety which, together with the aminoboronic acid residue —NHCH(R9)—B(OH)2, has affinity for the substrate binding site of thrombin; and
    • R9 is a straight chain alkyl group interrupted by one or more ether linkages and in which the total number of oxygen and carbon atoms is 3, 4, 5 or 6 or R9 is —(CH2)m—W where m is from 2, 3, 4 or 5 and W is —OH or halogen (F, Cl, Br or I); and
    • (b) a second species selected from the group consisting of pharmaceutically acceptable metal ions, said metal ions having a valency of n, lysine, arginine and aminosugars,


      wherein the formulation has an observed stoichiometry of first to second species essentially consistent with a notional stoichiometry of 1:1 except where the second species is a metal ion having a valency of greater than 1, in which case the observed stoichiometry is essentially consistent with a notional stoichiometry of n:1.


128. The formulation of paragraph 127 which has the characteristic that, after the formulation if not in an aqueous carrier is placed in one, it has a Ki for thrombin of about 20 nM or less.


129. The formulation of paragraph 127 or 128 in which R9 is 3-methoxypropyl and the second species is sodium ions, lithium ions or lysine.


130. The formulation of any of paragraphs 127 to 129 which is in the form of fine particles for combining with a liquid to form a liquid formulation.


131. A diethanolamine ester of a boronic acid of formula (VIII)

X-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2  (VIII),

where X is H or an amino protecting group.


132. A product comprising, in the form of a finely divided solid, a salt consisting essentially of a monosodium or monolithium salt of an acid of the formula Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, the salt containing no more than small amounts of other epimers of said acid, the salt optionally being in admixture with one or more anti-oxidants, preservatives or other additives.


133. The product of paragraph 132 in which the salt is in unit dosage form.


134. The product of paragraph 132 wherein the unit dosage form is small volume parenteral form for injection as an aqueous solution after reconstitution or is large volume parenteral form for infusion as an aqueous solution after reconstitution.


135. The product of any of paragraphs 132 to 134 which further includes an isotonicity agent.


136. The product of paragraph 132 which further includes water, optionally having dissolved therein one or more isotonicity agents and/or other additives, the water being in an amount suitable for dissolving said salt to form a liquid unit dosage form.


137. A product comprising, in the form of an isotonic aqueous solution, a salt consisting essentially of a monosodium or monolithium salt of an acid of the formula Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, the salt containing no more than small amounts of other epimers of said acid, the product optionally further containing one or more anti-oxidants, preservatives or other additives.


138. The product of paragraph 137 which is in unit dosage form for administration by injection or infusion.


139. A method of presenting an acid of the formula Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 in stabilised form for pharmaceutical use, comprising providing the add in the form of a monosodium, monolithium or monolysine salt thereof and for administration after reconstitution as an aqueous parenteral solution.


140. A process for separating diastereomers of a boronic acid of formula (I):
embedded image

    • where:
    • X is H (to form NH2) or an amino-protecting group;
    • aa1 is an amino acid of (R) configuration selected from Phe, Dpa and wholly or partially hydrogenated analogues thereof;
    • aa2 is an imino acid of (S) configuration having from 4 to 6 ring members;
    • R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen (F, Cl, Br or I),
    • and where C* is a chiral centre,


      the process comprising:
    • (A) combining a starting solution in diethylether of a boronic species selected from the boronic acid (I) and its esters with alcohols, in which alcohols the sole potential electron donor heteroatoms are oxygens which, in the boronic ester, correspond to the oxygens of the ester functional group, the starting solution containing both boronic species having a chiral centre C* of (R) configuration and boronic species having a chiral centre C* of (S) configuration; and (B) diethanolamine, the diethanolamine being in an amount of 1.25±0.1 equivalents based on the boronic species in which chiral centre C* is of (R) configuration, and mixing to form a mixture;
    • causing or allowing the boronic species and the diethanolamine to react until a precipitate forms; and
    • recovering the precipitate.


141. A process of paragraph 140 in which the diethanolamine is in an amount of from 1.2 to 1.3 equivalents based on the boronic species in which chiral centre C* is of (R) configuration.


142. A process of paragraph 141 in which the diethanolamine is in an amount of about 1.25 equivalents based on the boronic species.


143. A process of any of paragraphs 140 to 142 in which the alcohol is a diol.


144. A process of paragraph 143 in which the diol is not sterically hindered.


145. A process of paragraph 144 in which the diol is pinacol, neopentylglycol, 1,2-ethanediol, 1,2-propanediol, 1,3-propanediol, 2,3-butanediol, 1,2-diisopropylethanediol, or 5,6-decanediol.


146. A process of paragraph 145 in which the diol is pinacol.


147. A process of any of paragraphs 140 to 146 in which the boronic species and the diethanolamine are caused to react by heating the mixture to an elevated temperature.


148. A process of paragraph 147 in which the mixture is refluxed.


149. A process of paragraph 148 in which the mixture is refluxed for at least 10 hours.


150. A process of any of paragraphs 140 to 149 in which the precipitate is recovered by filtration.


151. A process of any of paragraphs 140 to 150 in which the recovered precipitate is washed with diethylether.


152. A process of any of paragraphs 140 to 151 in which the recovered precipitate, after washing in the event that the precipitate is washed, is dissolved in a solvent selected from CH2Cl2 and CHCl3 and reprecipitated by combining the resulting solution with diethylether.


153. A process of paragraph 152 in which the solvent is CH2Cl2.


154. A process of any of paragraphs 140 to 153 in which aa1 is selected from (R)-Dpa, (R)-Phe, (R)-Dcha and (R)-Cha.


155. A process of any of paragraphs 140 to 154 in which the boronic species in the starting solution comprises from 50% to 60% molecules having chiral centre C* of (R)-configuration and from 40% to 50% molecules having chiral centre C* of (S)-configuration.


156. A process of any of paragraphs 140 to 155 which further comprises converting the recovered precipitate to the acid of formula (I) by dissolving the precipitate in an organic solvent selected from halohydrocarbons and combinations thereof, agitating the resulting organic solution with an aqueous acid having a pH of below 3 whereby the dissolved precipitate is converted to the formula (I) acid, and recovering the formula (I) acid by evaporation.


157. A process of paragraph 156 in which the duration of contact between the organic solution and the aqueous acid is limited sufficiently to avoid substantial C—B bond breakage.


158. A process of paragraph 157 wherein the duration is not more than about 30 minutes when the contact takes place at room temperature.


159. A process of any of paragraphs 156 to 158 in which the aqueous acid is hydrochloric acid of about 2% w/v concentration or another aqueous mineral acid of similar pH.


160. A process of any of paragraphs 156 to 159 in which the organic solvent is selected from CH2Cl2 and CHCl3.


161. A process of paragraph 160 in which the organic solvent is CH2Cl2.


162. A process of any of paragraphs 156 to 161 in which the formula (I) acid is dried.


163. A process of paragraph 162 in which the formula (I) acid is dried when it is in the organic solvent by contacting the solvent with a hygroscopic solid.


164. A process of any of paragraphs 156 to 163 in which the formula (I) acid, when in the organic solvent, is washed with an aqueous ammonium salt.


165. A process of any of paragraphs 156 to 164 in which organic solvent is evaporated from the recovered formula (I) acid.


166. A process of any of paragraphs 156 to 165 which further comprises converting the recovered acid of formula (I) to a pharmaceutically acceptable base addition salt thereof by dissolving the acid in acetonitrile, combining the resultant solution with an aqueous solution or suspension of a pharmaceutically acceptable base, and causing or allowing the base and the acid to react, then evaporating to dryness to obtain an evaporation residue.


167. A process of paragraph 166 in which the step of causing or allowing the acid and the base to react comprises agitating the combination of the acetonitrile solution of the acid and the aqueous solution or suspension of the base at a temperature of not more than 35° C.


168. A process of paragraph 167 in which the temperature is not more than 25° C.


169. A process of any of paragraphs 166 to 168 which further comprises:

    • (i) redissolving the evaporation residue in acetonitrile and evaporating the resulting solution to dryness; and
    • (ii) repeating step (i) as often as necessary to obtain a dry evaporation residue.


170. A process of paragraph 169 wherein the dry evaporation residue has a loss on drying of less than about 0.5% when determined by drying in a vacuum drier at 40° C. at 100 mbar for 2 hours.


171. A process of paragraph 169 or 170 which further comprises:

    • dissolving the dry evaporation residue in acetonitrile or tetrahydrofuran to form a solution;
    • adding, at a rate sufficiently slow to avoid lump formation, said solution to a 3:1 to 1:3 v/v mixture of diethylether and an aliphatic or cycloaliphatic solvent to form a precipitate, said solution being added to the diethylether/(cyclo)aliphatic solvent mixture in a ratio (solution:mixture) of from 1:5 to 1:15 v/v;
    • recovering the precipitate; and
    • removing solvent from the recovered precipitate under reduced pressure whilst maintaining the temperature at no more than 35° C.


172. A process of paragraph 171 wherein the solvent removal process is performed until the precipitate has a loss on drying of less than about 0.5% when determined by drying in a vacuum drier at 40° C. at 100 mbar for 2 hours.


173. A process of paragraph 171 or paragraph 172 in which the temperature at the start of the drying process is about 10° C. and is increased during the process to about 35° C.


174. A process of any of paragraphs 171 to 173 in which the aliphatic or cycloaliphatic solvent is n-heptane.


175. A process of any of paragraphs 166 to 174 in which the base comprises a cation of valency n and is used in a stoichiometry (boronic add:base) of about n:1.


176. A process of any of paragraphs 166 to 175 in which the base is an alkali metal or alkaline earth metal base.


177. A process of any of paragraphs 166 to 176 in which the base is sodium hydroxide.


178. A process of any of paragraphs 171 to 175 in which the base is sodium hydroxide and the dry evaporation residue is dissolved in acetonitrile.


179. A process of any of paragraphs 171 to 175 in which the base is calcium hydroxide.


180. A process of any of paragraphs 171 to 175 in which the base is calcium hydroxide and the dry evaporation residue is dissolved in tetrahydrofuran.


181. A process for hydrolysing an ester of a boronic acid as defined by paragraph 140 or 154, comprising contacting the ester with an aqueous medium for a period sufficiently short substantially to avoid C—B bond cleavage.


182. A process of paragraph 181 wherein the aqueous medium is an aqueous acid having a pH of less than about 3.


183. A process of paragraph 182 wherein the aqueous add is hydrochloric acid having a concentration of about 2% w/v or another aqueous mineral acid of similar pH.


184. A process of any of paragraphs 181 to 183 wherein the contact period is about 30 minutes or less.


185. A process of any of paragraphs 181 to 184 which is carried out at a temperature of about 25° C.±2° C.


186. A process of any of paragraphs 181 to 185 wherein the ester is a diethanolamine ester.


187. A process for making a pharmaceutically acceptable base addition salt of a boronic acid as defined by paragraph 140 or 154, comprising:

    • dissolving the boronic acid in acetonitrile;
    • combining the resultant solution with an aqueous solution or suspension of a pharmaceutically acceptable base, and causing or allowing the base and the boronic acid to react;
    • evaporating to dryness to obtain an evaporation residue;
    • redissolving the evaporation residue in acetonitrile and evaporating the resulting solution to dryness; and
    • repeating the preceding step as often as necessary to obtain a substantially dry evaporation residue.


188. A process for making a boronic acid as defined by paragraph 140 or 154 or a pharmaceutically acceptable base addition salt thereof, which boronic acid has an R1 group of the formula —(CH2)s—O—R3 in which R3 is methyl or ethyl and s is independently 2, 3 or 4, comprising:

    • reacting a 1-metalloalkoxyalkane, where the alkoxyalkane is of the formula —(CH2)s—O—R3, and a borate ester, to form a compound of Formula (VI):

      (HO)2B—(CH2)S—O—R3  (VI),

      and synthesising the boronic acid from the compound of Formula (VI) and, if desired, converting the acid into a said salt thereof.


189. A process of paragraph 188 wherein the synthesis of the boronic acid and, if it is the case, conversion into a salt thereof involves a process of any of paragraphs 140 to 187.


190. A compound selected from the group consisting of boronic acids of formula (I) as defined by paragraph 140 or 154 and base addition salts thereof, the compound having a chiral purity of produced by a method of any of paragraphs 140 to 187.


191. A compound selected from the group consisting of boronic acids of formula (I) as defined by paragraph 140 or 154 and base addition salts thereof, the compound having a diastereomeric excess over the (R,S,S) isomer of about 95% or more, optionally of about 99% or more, e.g. about 99.5% or more.


192. A salt selected from the monolithium, monosodium and monopotassium salts of Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 and having a purity about that of the purity of such salt when prepared by the method of Example 3.


193. A salt of paragraph 192 having a diastereomeric excess over the (R,S,S,) isomer of about 99.5% or more and a purity measured as % HPLC peak area of at least 97.5% when determined by the method of Example 43.


194. A salt of paragraph 192 or paragraph 193 which is the monosodium salt.


195. A salt selected form the hemicalcium and hemimagnesium salts of Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 and having a purity about that of the purity of such salt when prepared by the method of Example 4.


196. A salt of paragraph 195 having a diastereomeric excess over the (R,S,S) isomer of about 99.5% or more and a purity measured as % HPLC peak area of at least 97.5% when determined by the method of Example 43.


197. A salt of paragraph 195 or paragraph 196 which is the hemicalcium salt.


198. A compound of Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, and the esters and salts thereof (e.g. selected from the mono alkali metal salts and hemi alkaline earth metal salts), which compound has a purity measured as % HPLC peak area of at least 97.5%, for example 99% or more, e.g. 99.5% or more, the % HPLC peak area being determined by the method of Example 43.


199. A compound of paragraph 198 which is the monolithium, monosodium, hemicalcium or hemimagnesium salt.


200. A compound selected from boronic acids as defined by paragraph 140 or 154 and the esters and salts thereof, the compound being substantially free of impurities detectable by HPLC, e.g. reverse phase HPLC.


201. A pharmaceutically acceptable base addition salt of a boronic acid as defined by paragraph 140 or 154 which is substantially free of degradation products derived from cleavage of the C—B bond thereof.


202. A compound selected from boronic acids as defined in paragraph 188 and esters and salts of such acids, the compound being free of any compound which is of the same structure except for replacement of the R1 group by a group of the formula —(CH2)S—H.


203. A pharmaceutically acceptable base addition salt of Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 which is substantially free of the compound:
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204. A salt of any of paragraphs 201 to 203 which is in an amount of at least 1 kg, e.g. has been produced in an amount of at least 100 kg a day.


205. A pharmaceutically acceptable base addition salt of a boronic acid as defined by paragraph 140 or 154, for example Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, which contains a trace amount of an aliphatic or cycloaliphatic solvent.


206. A salt of paragraph 205 wherein the solvent is an alkane.


207. A salt of paragraph 206 wherein the solvent is an n-alkane.


208. A salt of paragraph 207 wherein the solvent is n-heptane.


209. A salt of any of paragraphs 204 to 208 wherein the solvent is present in an amount of about 0.01% or less.


210. A product for use as a pharmaceutical, comprising a salt of any of paragraphs 190 to 209.


211. The subject matter of any of paragraphs wherein the salt is a salt of any of paragraphs 190 to 209.


212. The use of diethanolamine to resolve by selective precipitation the (R,S,R) and (R,S,S) isomers of a boronic acid of formula (I) as defined by paragraph 140 or 154.


213. A product comprising an (R,S,R) isomer of a boronic acid of formula (I) as defined by paragraph 140 or 154 whenever produced by a process which used diethanolamine to resolve the (R,S,R) and (R,S,S) isomers by precipitation.


214. A method for making an anti-thrombotic formulation, comprising making a salt of any of paragraphs 190 to 209 into such a formulation at a rate of at least 1000 kg of said salt a year.


215. A method for providing an antithrombotic formulation, comprising delivering to pharmacies a formulation of paragraph 211.


216. A package comprising a pharmaceutical formulation containing a salt of any of paragraphs 190 to 209 and comprising a marketing authorisation number and/or a patient instruction leaflet.


217. A pharmaceutically acceptable base addition salt of Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2, which salt contains a trace amount of an aliphatic or cycloaliphatic solvent but is substantially free of an impurity of the structure:
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218. A process for making an aminoboronate of Formula (XXI)
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wherein

  • RX is H or a substituent which does not prevent synthesis;
  • RY is alkylene; and
  • RZ is alkyl,


    the process comprising reacting a 1-metalloalkoxyalkane with a borate ester to form a boronic add of the formula RZ—O—RY—B(OH)2, esterifying the add, contacting the esterified acid with CH2Cl2 and ZnCl2 in the presence of a strong base, contacting the resultant produce with LiHMDS and in turn contacting the resultant product with hydrogen chloride.


219. An aminoboronate of Formula (XXI) of paragraph 123 which is free of contaminant of Formula (XXII):

H2N—C(RX)(RY)—B(OH)2  (XXII).


220. A process for making an organoboronic acid of Formula (XXIII)
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wherein

  • Q-CO comprises at least an amino acid residue;
  • RX is H or a substituent which does not prevent synthesis;
  • RY is alkylene;
  • RZ is alkyl,


    the process comprising:
  • a) performing the method of paragraph 123 to make an aminoboronate of Formula (XXI), or providing an aminoboronate of paragraph 124, and
  • B) reacting the aminoboronate with a compound selected from amino acids and peptides, which compounds are optionally N-terminally protected.


221. A compound selected from organoboronic acids of Formula (XXIII) as defined in paragraph 125, or an ester or salt thereof which is free of an impurity selected from compounds of Formula (XXIV):
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and esters and salts thereof.


222. A pharmaceutically acceptable base addition salt of a boronic acid of formula I as defined by paragraph 140 or 154, wherein the boronic acid having the chiral centre C* of (R)-configuration is in a large diastereomeric excess.


223. A salt of paragraph 222 which is substantially free of any degradation product resulting from C—B bond cleavage.


224. A salt of paragraph 222 or paragraph 223 wherein R1 is as defined in paragraph 65 and the salt is substantially free of the corresponding boronic acid species in which R1 is —(CH2)sH.


225. A pharmaceutical formulation comprising a salt of any of paragraphs 190 to 209 and substantially free of any impurity derived from synthesis of the salt.


226. A product, wherein the product is an industrial product and it comprises a product of any of paragraphs 190 to 211, 213, 216, 217 and 219 to 225.


227. A pharmaceutical formulation which comprises the following first and second species and optionally one or more other pharmaceutically acceptable components:

    • a) a therapeutically effective amount of a first species selected from (i) boronic acids of formula (IIa), (ii) boronate anions of the acid, (iii) any equilibrium form of (i) or (ii), and (iv) any combination of the aforegoing:
      embedded image
    • where:
    • X is H (to form NH2) or an amino-protecting group;
    • aa1 is an amino add of (R)-configuration having a hydrocarbyl side chain containing no more than 20 carbon atoms and comprising at least one cyclic group having up to 13 carbon atoms;
    • aa2 is an imino acid of (S)-configuration having from 4 to 6 ring members;
    • C* is a chiral center of (R)-configuration;
    • R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen selected from F, Cl, Br or I,
    • b) a second species selected from the group consisting of (v) pharmaceutically acceptable alkali metal ions, (vi) pharmaceutically acceptable basic organic nitrogen-containing compounds having a pKb of about 7 or more, (vii) any equilibrium form of (v), and (viii) any combination of the aforegoing,


228. The formulation of paragraph 227 which is substantially free of degradation product derived from cleavage of the C—B bond of the first species.


229. The formulation of paragraph 227 or 228 wherein the first species is in a diastereomeric excess of about 98% or more over the (R,S,S) diastereomer thereof.


230. A pharmaceutical formulation which comprises the following first and second species and optionally one or more other pharmaceutically acceptable components:

    • a) a therapeutically effective amount of a first species selected from (i) the boronic add Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH), (ii) boronate anions of the acid, (iii) any equilibrium form of (i) or (ii), and (iv) any combination of the aforegoing, and
    • b) a second species selected from the group consisting of (v) pharmaceutically acceptable alkali metal ions, (vi) pharmaceutically acceptable basic organic nitrogen-containing compounds having a pKb of about 7 or more, (vii) any equilibrium form of (v), and (viii) any combination of the aforegoing.


231. Tthe formulation of paragraph 230 which is substantially free of the following compound and equilibrium forms thereof:
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232. The formulation of paragraph 230 or 231 which is substantially free of the following compound and equilibrium forms thereof:
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233. The formulation of paragraph 230, 231 or 232 wherein the first species is in a diastereomeric excess of about 98% or more over the (R,S,S) diastereomer thereof.

Claims
  • 1. An isolated compound selected from boronic acids of formula (IIIa):
  • 2. A compound of claim 1 wherein aa1 is selected from Dpa, Phe, Dcha and Cha.
  • 3. A compound of claim 1 wherein aa1 is Phe or Dpa.
  • 4. A compound of claim 2 wherein aa2 is a residue of an imino acid of formula (IV)
  • 5. A compound of claim 4 wherein R1 is a group of the formula —(CH2)s-Z, where s is 2, 3 or 4 and Z is —OH, —OMe, —OEt or halogen.
  • 6. A compound of claim 5 wherein the boronic acid is of formula (VIII):
  • 7. A compound of claim 5 where X is R6—(CH2)p—C(O)—, R6—(CH2)p—S(O)2—, R6—(CH2)p—NH—C(O)— or R6—(CH2)p—O—C(O)— wherein p is 0, 1, 2, 3, 4, 5 or 6 and R6 is H or a 5 to 13-membered cyclic group optionally substituted by 1, 2 or 3 substituents selected from halogen, amino, nitro, hydroxy, a C5-C6 cyclic group, a C1-C4 alkyl group, a C1-C4 alkyl group containing an in-chain O, a C1-C4 alkyl group containing an in-chain O and linked to the cyclic group through an in-chain O and a C1-C4 alkyl group linked to the cyclic group through an in-chain O, the aforesaid alkyl groups optionally being substituted by a substituent selected from halogen, amino, nitro, hydroxy and a C5-C6 cyclic group, and optionally wherein said 5 to 13-membered cyclic group is aromatic or heteroaromatic.
  • 8. A compound of claim 5 wherein X is R6—(CH2)p—C(O)— or R6—(CH2)p—O—C(O)— and p is 0 or 1.
  • 9. A compound of claim 1 wherein the boronic acid is Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2.
  • 10. A particulate composition comprising an isolated compound selected from boronic acids of formula (IIIa):
  • 11. A compound selected from boronic acids of formula (IIIa):
  • 12. A compound of claim 11 which has a decrease in weight upon drying of less than 0.5% of its initial weight when dried in a vacuum drier at 40° C. at 100 mbar for 2 hours.
  • 13. A compound of claim 11 wherein the boronic acid is of formula (VIII):
  • 14. A compound of claim 11 wherein X is R6—(CH2)p—C(O)—, R6—(CH2)p—S(O)2—, R6—(CH2)p—NH—C(O)— or R6—(CH2)p—O—C(O)— wherein p is 0, 1, 2, 3, 4, 5 or 6 and R6 is H or a 5 to 13-membered cyclic group optionally substituted by 1, 2 or 3 substituents selected from halogen, amino, nitro, hydroxy, a C5-C6 cyclic group, a C1-C4 alkyl group, a C1-C4 alkyl group containing an in-chain O, a C1-C4 alkyl group containing an in-chain O and linked to the cyclic group through an in-chain O and a C1-C4 alkyl group linked to the cyclic group through an in-chain 0, the aforesaid alkyl groups optionally being substituted by a substituent selected from halogen, amino, nitro, hydroxy and a C5-C6 cyclic group, and optionally said 5 to 13-membered cyclic group is aromatic or heteroaromatic; aa1 is selected from Phe, Dpa and wholly or partially hydrogenated analogues thereof; aa2 is a residue of an imino acid of formula (IV) where R11 is —CH2—, —CH2—CH2—, —S—CH2—, —S—C(CH3)2— or —CH2—CH2—CH2—, which group, when the ring is 5- or 6-membered, is optionally substituted at one or more —CH2— groups by from 1 to 3 C1-C3 alkyl groups; R1 is 2-bromoethyl, 2-chloroethyl, 2-methoxyethyl, 3-bromopropyl, 3-chloropropyl or 3-methoxypropyl and wherein the (R,S,R) isomer is in a diastereomeric excess of 99% or more over the (R,S,S) isomer.
  • 15. A compound of claim 14 wherein the boronic acid is a compound of claim 1 wherein the boronic acid is Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2.
  • 16. A compound of claim 11 which is substantially free of degradation product derived from cleavage of the C—B bond thereof.
  • 17. A compound of claim 15 which has a purity measured as HPLC peak area of at least 97.5%, the % peak area being determined by the method of Example 43.
  • 18. A compound of claim 17 wherein the purity is at least 99%.
  • 19. Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 when substantially free of the compound:
  • 20. A compound of claim 5 in which R1 is a group of the formula —(CH2)s-Z wherein Z is —OMe or —OEt and which is free of any compound which is of the same structure except for replacement of the R1 group by a group of the formula —(CH2)s—H.
  • 21. Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 when substantially free of the compound:
  • 22. Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 when in a diastereomeric excess of at least 99% over the (R,S,S) diastereomer, substantially free of the compound:
  • 23. A product comprising isolated, dry Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 in a diastereomeric excess of 99% or more over its (R,S,S) diastereomer.
  • 24. A product of claim 23 which is sterile and otherwise adapted to be pharmaceutically acceptable.
  • 25. A process for making a pharmaceutically acceptable base addition salt of a boronic acid of formula (IIIa):
  • 26. The process of claim 25 wherein the salt is a metal salt
  • 27. The process of claim 25 wherein the salt is a salt of an alkali metal, an alkaline earth metal or zinc.
  • 28. The process of claim 25 wherein the base is an organic base having a pKb of 7 or more.
  • 29. A process for making a pharmaceutically acceptable base addition salt of an organoboronic acid inhibitor of thrombin having a neutral thrombin S1-binding moiety linked through a peptide linkage to a hydrophobic thrombin S2/S3-binding moiety, comprising combining a solution of the organoboronic add in a water-miscible organic solvent with an aqueous solution or suspension of the base, causing or allowing the acid and the base to react, and recovering the salt.
  • 30. A process of claim 29 in which the base comprises a cation of valency n and is used in a stoichiometry (boronic acid:base) of about n:1.
  • 31. A process of claim 30 in which the base is a metal base.
  • 32. A process of claim 31 in which the base is an alkali metal or alkaline earth metal base, or a zinc base.
  • 33. A process of claim 30 in which the base is an organic nitrogen-containing compound having a pKb of about 7 or more.
  • 34. A process of claim 29 wherein the solvent is acetonitrile.
  • 35. A process of claim 34 wherein the recovery of the salt comprises evaporating to dryness to obtain an evaporation residue and the process further comprises: redissolving the evaporation residue in acetonitrile and evaporating the resulting solution to dryness; and repeating the redissolution and evaporation steps as often as necessary to obtain a substantially dry evaporation residue.
  • 36. A process of claim 35 which further comprises: dissolving the dry evaporation residue in acetonitrile or tetrahydrofuran to form a solution; adding, at a rate sufficiently slow to avoid lump formation, said solution to a 3:1 to 1:3 v/v mixture of diethylether and an aliphatic or cycloaliphatic solvent to form a precipitate, said solution being added to the diethylether/(cyclo)aliphatic solvent mixture in a ratio (solution:mixture) of from 1:5 to 1:15 v/v; recovering the precipitate; and removing solvent from the recovered precipitate under reduced pressure whilst maintaining the temperature at no more than 35° C.
  • 37. A process of claim 36 in which the aliphatic or cycloaliphatic solvent is n-heptane.
  • 38. A process of claim 34 in which the base is sodium hydroxide.
  • 39. A process of claim 36 in which the base is sodium hydroxide and the dry evaporation residue is dissolved in acetonitrile.
  • 40. A process of claim 34 in which the base is calcium hydroxide.
  • 41. A process of claim 36 in which the base is calcium hydroxide and the dry evaporation residue is dissolved in tetrahydrofuran.
  • 42. A process of claim 29 wherein the solvent is tetrahydrofuran or an alcohol.
  • 43. A process claim 29 wherein the solvent is dry.
  • 44. A process of claim 29 wherein the boronic acid is of formula (I):
  • 45. A process of claim 44 wherein R9 is an alkoxyalkyl group and Y is an optionally N-terminally protected dipeptide which binds to the S3 and S2 binding sites of thrombin and the peptide linkages in the acid are optionally and independently N-substituted by a C1-C13 hydrocarbyl optionally containing in-chain or in-ring nitrogen, oxygen or sulfur and optionally substituted by a substituent selected from halo, hydroxy and trifluoromethyl, and optionally wherein said dipeptide is N-terminally protected, all the peptide linkages in the acid are unsubstituted or the dipeptide is N-terminally protected and all the peptide linkages in the acid are unsubstituted.
  • 46. A process of claim 45 wherein the S3-binding amino acid residue is of (R)-configuration, the S2-binding residue is of (S)-configuration, and the fragment —NHCH(R9)—B(OH) is of (R)-configuration.
  • 47. A process of claim 29 wherein the boronic acid is of formula (II):
  • 48. A process of claim 47 wherein X is R6—(CH2)p—C(O)—, R6—(CH2)p—S(O)2—, R6—(CH2)p—NH—C(O)— or R6—(CH2)p—O—C(O)— wherein p is 0, 1, 2, 3, 4, 5 or 6 and R6 is H or a 5 to 13-membered cyclic group optionally substituted by 1, 2 or 3 substituents selected from halogen, amino, nitro, hydroxy, a C5-C6 cyclic group, a C1-C4 alkyl group, a C1-C4 alkyl group containing an in-chain 0, a C1-C4 alkyl group containing an in-chain 0 and linked to the cyclic group through an in-chain 0 and a C1-C4 alkyl group linked to the cyclic group through an in-chain O, the aforesaid alkyl groups optionally being substituted by a substituent selected from halogen, amino, nitro, hydroxy and a C5-C6 cyclic group, and optionally said 5 to 13-membered cyclic group is aromatic or heteroaromatic, e.g. is phenyl or a 6-membered heteroaromatic group, for example X is benzyloxycarbonyl; aa1 is selected from Phe, Dpa and wholly or partially hydrogenated analogues thereof, and optionally is selected from Dpa, Phe, Dcha and Cha; aa2 is a residue of an imino acid of formula (IV) where R11 is —CH2—, —CH2—CH2—, —S—CH2—, —S—C(CH3)2— or —CH2—CH2—CH2—, which group, when the ring is 5- or 6-membered, is optionally substituted at one or more —CH2— groups by from 1 to 3 C1-C3 alkyl groups; R1 is 2-bromoethyl, 2-chloroethyl, 2-methoxyethyl, 3-bromopropyl, 3-chloropropyl or 3-methoxypropyl; and aa1 is of (R)-configuration, aa2 is of (S)-configuration and the fragment —NH—CH(R1)— B(OH)2 is of (R)-configuration.
  • 49. A process of claim 29 wherein the boronic acid is of formula (VIII):
  • 50. A solution whose solvent is a water-miscible organic solvent and which contains species selected from an organoboronic add inhibitor of thrombin having a neutral thrombin S1-binding moiety linked through a peptide linkage to a hydrophobic thrombin S2/S3-binding moiety, and equilibrium forms of the organoboronic acid.
  • 51. A solution of claim 50 wherein the solvent is acetonitrile.
  • 52. A solution of claim 50 wherein the solvent is an alcohol or tetrahydrofuran.
  • 53. A solution of claim 50 having the characteristics of a solution obtained by dissolving the free organoboronic acid in the solvent.
  • 54. A solution of claim 50 which consists essentially of the solvent, the organoboronic acid dissolved in the solvent and any species in equilibrium with the organoboronic acid.
  • 55. A solution of claim 50 wherein the organoboronic acid is of formula (I):
  • 56. A solution of claim 50 wherein the boronic acid is of formula (II):
  • 57. A solution of claim 50 wherein the acid is Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 and the solvent is acetonitrile.
  • 58. A solution of claim 50 wherein the acid is Cbz-(R)-Phe-(S)-Pro-(R)-Mpg-B(OH)2 and the solvent is tetrahydrofuran or an alcohol.
  • 59. A process for making a pharmaceutical formulation, comprising performing the process of claim 25 and formulating the product salt into a pharmaceutical formulation.
Priority Claims (5)
Number Date Country Kind
GB 0220764.5 Sep 2002 GB national
GB 0220822.1 Sep 2002 GB national
GB 0307817.7 Apr 2003 GB national
GB 0311237.2 May 2003 GB national
GB 0315691.6 Jul 2003 GB national
Parent Case Info

This application claims the benefit of U.S. Provisional Application No. 60/501,718 filed Sep. 9, 2003, which is incorporated herein by reference. This application is a continuation-in-part of U.S. application Ser. No. 10/659,179, filed Sep. 9, 2003, which is incorporated herein by reference, which claims the benefit of U.K. Application No. GB 0220764.5, filed Sep. 9, 2002, U.K. Application No. GB 0220822.1, filed Sep. 9, 2002, U.K. Application No. GB 0307817.7, filed Apr. 4, 2003, U.K. Application No. GB 0311237.2, filed May 16, 2003, and U.K. Application No. GB 0315691.6, filed Jul. 4, 2003, all of which are incorporated herein by reference. This application is also a continuation-in-part of U.S. application Ser. No. 10/658,971, filed Sep. 9, 2003, which is incorporated herein by reference, which claims the benefit of U.K. Application No. GB 0220764.5, filed Sep. 9, 2002, U.K. Application No. GB 0220822.1, filed Sep. 9, 2002, U.K. Application No. GB 0307817.7, filed Apr. 4, 2003, U.K. Application No. GB 0311237.2, filed May 16, 2003, and U.K. Application No. GB 0315691.6, filed Jul. 4, 2003, all of which are incorporated herein by reference. This application is also a continuation-in-part of U.S. application Ser. No. 10/659,178, filed Sep. 9, 2003, which is incorporated herein by reference, which claims the benefit of U.K. Application No. GB 0220764.5, filed Sep. 9, 2002, U.K. Application No. GB 0220822.1, filed Sep. 9, 2002, U.K. Application No. GB 0307817.7, filed Apr. 4, 2003, U.K. Application No. GB 0311237.2, filed May 16, 2003, and U.K. Application No. GB 0315691.6, filed Jul. 4, 2003, all of which are incorporated herein by reference.

Provisional Applications (1)
Number Date Country
60501718 Sep 2003 US
Continuation in Parts (3)
Number Date Country
Parent 10659179 Sep 2003 US
Child 10937854 Sep 2004 US
Parent 10658971 Sep 2003 US
Child 10937854 Sep 2004 US
Parent 10659178 Sep 2003 US
Child 10937854 Sep 2004 US