PLANT MESSENGER PACKS ENCAPSULATING POLYPEPTIDES AND USES THEREOF

Abstract
Disclosed herein are plant messenger packs (PMPs) encapsulating one or more exogenous polypeptides. Also disclosed are methods of producing a PMP comprising an exogenous polypeptide.
Description
BACKGROUND

Polypeptides (e.g., proteins or peptides) are used in therapies (e.g., for the treatment of a disease or condition), for diagnostic purposes, and as pathogen control agents. However, current methods of delivering polypeptides to cells may be limited by the mechanism of delivery, e.g., the efficiency of delivery of the polypeptide to a cell. Therefore, there is a need in the art for methods and compositions for the delivery of polypeptides to cells.


SUMMARY OF THE INVENTION

In one aspect, the invention features a plant messenger pack (PMP) comprising one or more exogenous polypeptides, wherein the one or more exogenous polypeptides are mammalian therapeutic agents and are encapsulated by the PMP, and wherein the exogenous polypeptides are not pathogen control agents.


In some aspects, the mammalian therapeutic agent is an enzyme. In some aspects, the enzyme is a recombination enzyme or an editing enzyme.


In some aspects, the mammalian therapeutic agent is an antibody or an antibody fragment.


In some aspects, the mammalian therapeutic agent is an Fc fusion protein.


In some aspects, the mammalian therapeutic agent is a hormone. In some aspects, the mammalian therapeutic agent is insulin.


In some aspects, the mammalian therapeutic agent is a peptide.


In some aspects, the mammalian therapeutic agent is a receptor agonist or a receptor antagonist.


In some aspects, the mammalian therapeutic agent is an antibody of Table 1, a peptide of Table 2, an enzyme of Table 3, or a protein of Table 4.


In some aspects, the mammalian therapeutic agent has a size of less than 100 kD.


In some aspects, the mammalian therapeutic agent has a size of less than 50 kD.


In some aspects, the mammalian therapeutic agent has an overall charge that is neutral. In some aspects, the mammalian therapeutic agent has been modified to have a charge that is neutral. In some aspects, the mammalian therapeutic agent has an overall charge that is positive. In some aspects, the mammalian therapeutic agent has an overall charge that is negative.


In some aspects, the exogenous polypeptide is released from the PMP in a target cell with which the PMP is contacted. In some aspects, the exogenous polypeptide exerts activity in the cytoplasm of the target cell. In some aspects, the exogenous polypeptide is translocated to the nucleus of the target cell.


In some aspects, the exogenous polypeptide exerts activity in the nucleus of the target cell.


In some aspects, uptake by a cell of the exogenous polypeptide encapsulated by the PMP is increased relative to uptake of the exogenous polypeptide not encapsulated by a PMP.


In some aspects, the effectiveness of the exogenous polypeptide encapsulated by the PMP is increased relative to the effectiveness of the exogenous polypeptide not encapsulated by a PMP.


In some aspects, the exogenous polypeptide comprises at least 50 amino acid residues.


In some aspects, the exogenous polypeptide is at least 5 kD in size.


In some aspects, the PMP comprises a purified plant extracellular vesicle (EV), or a segment or extract thereof. In some aspects, the EV or segment or extract thereof is obtained from a citrus fruit, e.g., a grapefruit or a lemon.


In another aspect, the invention features a composition comprising a plurality of the PMPs of any of the above aspects.


In some aspects, the PMPs in the composition are at a concentration effective to increase the fitness of a mammal.


In some aspects, the exogenous polypeptide is at a concentration of at least 0.01, 0.1, 0.2, 0.3, 0.4, 0.5, or 1 μg polypeptide/mL.


In some aspects, at least 15% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide. In some aspects, at least 50% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide. In some aspects, at least 95% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide.


In some aspects, the composition is formulated for administration to a mammal. In some aspects, the composition is formulated for administration to a mammalian cell.


In some aspects, the composition further comprises a pharmaceutically acceptable vehicle, carrier, or excipient.


In some aspects, the composition is stable for at least one day at room temperature, and/or stable for at least one week at 4° C. In some aspects, the PMPs are stable for at least 24 hours, 48 hours, seven days, or 30 days at 4° C. In some aspects, the PMPs are further stable at a temperature of at least 20° C., 24° C., or 37° C.


In another aspect, the disclosure features a composition comprising a plurality of PMPs, wherein each of the PMPs is a plant EV, or a segment or extract thereof, wherein each of the plurality of PMPs encapsulate an exogenous polypeptide, wherein the exogenous polypeptide is a mammalian therapeutic agent, the exogenous polypeptide is not a pathogen control agent, and the composition is formulated for delivery to an animal.


In another aspect, the disclosure features a pharmaceutical composition comprising a composition according to any one of the above aspects and a pharmaceutically acceptable vehicle, carrier, or excipient.


In another aspect, the disclosure features a method of producing a PMP comprising an exogenous polypeptide, wherein the exogenous polypeptide is a mammalian therapeutic agent, and wherein the exogenous polypeptide is not a pathogen control agent, the method comprising (a) providing a solution comprising the exogenous polypeptide; and (b) loading the PMP with the exogenous polypeptide, wherein the loading causes the exogenous polypeptide to be encapsulated by the PMP.


In some aspects, the exogenous polypeptide is soluble in the solution.


In some aspects, the loading comprises one or more of sonication, electroporation, and lipid extrusion. In some aspects, the loading comprises sonication and lipid extrusion. In some aspects, the loading comprises lipid extrusion. In some aspects, PMP lipids are isolated prior to lipid extrusion. In some aspects, the isolated PMP lipids comprise glycosylinositol phosphorylceramides (GIPCs).


In another aspect, the disclosure features a method for delivering a polypeptide to a mammalian cell, the method comprising (a) providing a PMP comprising one or more exogenous polypeptides, wherein the one or more exogenous polypeptides are mammalian therapeutic agents and are encapsulated by the PMP, and wherein the exogenous polypeptides are not pathogen control agents; and (b) contacting the cell with the PMP, wherein the contacting is performed with an amount and for a time sufficient to allow uptake of the PMP by the cell. In some aspects, the cell is a cell in a subject.


In another aspect, the disclosure features a PMP, composition, pharmaceutical composition, or method of any of the above aspects, wherein the mammal is a human.


In another aspect, the disclosure features a method for treating diabetes, the method comprising administering to a subject in need thereof an effective amount of a composition comprising a plurality of PMPs, wherein one or more exogenous polypeptides are encapsulated by the PMP. In some aspects, the administration of the plurality of PMPs lowers the blood sugar of the subject. In some aspects, the exogenous polypeptide is insulin.


In another aspect, the disclosure features a PMP, composition, pharmaceutical composition, or method of any of the above aspects, wherein the PMP is not significantly degraded by gastric fluids, e.g., is not significantly degraded by fasted gastric fluids.


In a further aspect, the disclosure features a plant messenger pack (PMP) comprising one or more exogenous polypeptides, wherein the one or more exogenous polypeptides are encapsulated by the PMP.


In some aspects, the exogenous polypeptide is a therapeutic agent. In some aspects, the therapeutic agent is insulin.


In some aspects, the exogenous polypeptide is an enzyme. In some aspects, the enzyme is a recombination enzyme or an editing enzyme.


In some aspects, the exogenous peptide is a pathogen control agent.


In some aspects, the exogenous polypeptide is released from the PMP in a target cell with which the PMP is contacted. In some aspects, the exogenous polypeptide exerts activity in the cytoplasm of the target cell. In some aspects, the exogenous polypeptide is translocated to the nucleus of the target cell.


In some aspects, the exogenous polypeptide exerts activity in the nucleus of the target cell.


In some aspects, uptake by a cell of the exogenous polypeptide encapsulated by the PMP is increased relative to uptake of the exogenous polypeptide not encapsulated by a PMP.


In some aspects, the effectiveness of the exogenous polypeptide encapsulated by the PMP is increased relative to the effectiveness of the exogenous polypeptide not encapsulated by a PMP.


In some aspects, the exogenous polypeptide comprises at least 50 amino acid residues. In some aspects, the exogenous polypeptide is at least 5 kD in size.


In some aspects, the exogenous polypeptide comprises fewer than 50 amino acid residues.


In some aspects, the PMP comprises a purified plant extracellular vesicle (EV), or a segment or extract thereof. In some aspects, the EV or segment or extract thereof is obtained from a citrus fruit. In some aspects, the citrus fruit is a grapefruit or a lemon.


In another aspect, the disclosure features a composition comprising a plurality of the PMPs of any of the above aspects.


In some aspects, the PMPs in the composition are at a concentration effective to increase the fitness of an organism. In some aspects, the PMPs in the composition are at a concentration effective to decrease the fitness of an organism.


In some aspects, the exogenous polypeptide is at a concentration of at least 0.01, 0.1, 0.2, 0.3, 0.4, 0.5, or 1 μg polypeptide/mL.


In some aspects, at least 15% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide. In some aspects, at least 50% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide. In some aspects, at least 95% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide.


In some aspects, the composition is formulated for administration to an animal. In some aspects, the composition is formulated for administration to an animal cell. In some aspects, the composition further comprises a pharmaceutically acceptable vehicle, carrier, or excipient.


In some aspects, the composition is formulated for administration to a plant. In some aspects, the composition is formulated for administration to a bacterium. In some aspects, the composition is formulated for administration to a fungus.


In some aspects, the composition is stable for at least one day at room temperature, and/or stable for at least one week at 4° C. In some aspects, the PMPs are stable for at least 24 hours, 48 hours, seven days, or 30 days at 4° C. In some aspects, the PMPs are further stable at a temperature of at least 20° C., 24° C., or 37° C.


In another aspect, the disclosure features a composition comprising a plurality of PMPs, wherein each of the PMPs is a plant EV, or a segment or extract thereof, wherein each of the plurality of PMPs encapsulate an exogenous polypeptide, and wherein the composition is formulated for delivery to an animal.


In another aspect, the disclosure features a pharmaceutical composition comprising a composition according to claim 1 and a pharmaceutically acceptable vehicle, carrier, or excipient.


In another aspect, the disclosure features a method of producing a PMP comprising an exogenous polypeptide, the method comprising (a) providing a solution comprising the exogenous polypeptide; and (b) loading the PMP with the exogenous polypeptide, wherein the loading causes the exogenous polypeptide to be encapsulated by the PMP.


In some aspects, the exogenous polypeptide is soluble in the solution.


In some aspects, the loading comprises one or more of sonication, electroporation, and lipid extrusion. In some aspects, the loading comprises sonication and lipid extrusion.


In some aspects, loading comprises lipid extrusion. In some aspects, PMP lipids are isolated prior to lipid extrusion. In some aspects, the isolated PMP lipids comprise glycosylinositol phosphorylceramides (GIPCs).


In another aspect, the disclosure features a method for delivering a polypeptide to a cell, the method comprising (a) providing a PMP comprising one or more exogenous polypeptides, wherein the one or more exogenous polypeptides are encapsulated by the PMP; and (b) contacting the cell with the PMP, wherein the contacting is performed with an amount and for a time sufficient to allow uptake of the PMP by the cell.


In some aspects, the cell is an animal cell. In some aspects, the cell is a cell in a subject.


In another aspect, the disclosure features a method for treating diabetes, the method comprising administering to a subject in need thereof an effective amount of a composition comprising a plurality of PMPs, wherein one or more exogenous polypeptides are encapsulated by the PMP. In some aspects, the administration of the plurality of PMPs lowers the blood sugar of the subject. In some aspects, the exogenous polypeptide is insulin.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1A is a scatter plot and a bar graph showing PMP final concentration (PMPs/mL) and PMP size (in nm) in combined PMP-containing size exclusion chromatography (SEC) fractions following filter sterilization.



FIG. 1B is a graph showing PMP protein concentration (in μg/mL) in individual eluted fractions from SEC, as measured using a bicinchoninic acid assay (BCA assay). PMPs are eluted in fractions 4-6.



FIG. 2A is a schematic diagram showing the use of the Cre reporter system with plant messenger packs (PMPs) loaded with Cre recombinase. Human embryonic kidney 293 cells (HEK293 cells) comprising a Cre reporter transgene express GFP in the absence of the Cre protein (Unrecombined reporter+ cell), and express RFP in the presence of the Cre protein (Recombined reporter+ cell). The Cre protein is delivered to the cell in a PMP (+Cre-PMP).



FIG. 2B is a set of micrographs showing expression of fluorescent proteins in HEK293 cells that have been treated with Cre recombinase (Cre) and grapefruit (GF) PMPs that have not been electroporated; GFP PMPs only; CRE only; or Cre-loaded grapefruit PMPs. The top row shows fluorescence of GFP. The middle row shows fluorescence of RFP. RFP is expressed only in cells that have received Cre-loaded GF PMPs. The bottom row shows an overlay of the GFP and RFP fluorescent signals and a brightfield channel.



FIG. 3 is a schematic diagram showing an assay for the stability of loaded PMPs provided by oral delivery. (i) shows a PMP loaded with a human insulin polypeptide and comprising the covalent membrane dye DL800 IR or Alexa488. (ii) shows an in vitro assay for stability of PMPs and insulin exposed to mimetics of gastrointestinal (GI) juice. (iii) shows an in vivo assay for stability of PMPs and insulin provided by oral delivery (PMP gavage) to a streptzotocin-induced diabetes model mouse. Blood glucose levels, blood human insulin levels, immune profile, and biodistribution of DL800-labeled PMPs are measured.



FIG. 4 is a schematic diagram showing an assay for in vivo delivery by PMPs of Cre recombinase to a mouse having a luciferase Cre reporter construct (Lox-STOP-Lox-LUC). When Cre recombinase is delivered to a cell or tissue, recombination occurs and luciferase is expressed. Biodistribution of Cre recombinase by PMPs is measured by assessing luciferase expression in mouse tissues.



FIG. 5A is a schematic diagram showing a protocol for grapefruit PMP production using a destructive juicing step involving the use of a blender, followed by ultracentrifugation and sucrose gradient purification. Images are included of the grapefruit juice after centrifugation at 1000×g for 10 min and the sucrose gradient band pattern after ultracentrifugation at 150,000×g for 2 hours.



FIG. 5B is a plot of the PMP particle distribution measured by the Spectradyne NCS1.



FIG. 6 is a schematic diagram showing a protocol for grapefruit PMP production using a mild juicing step involving use of a mesh filter, followed by ultracentrifugation and sucrose gradient purification. Images are included of the grapefruit juice after centrifugation at 1000×g for 10 min and the sucrose gradient band pattern after ultracentrifugation at 150,000×g for 2 hours.



FIG. 7A is a schematic diagram showing a protocol for grapefruit PMP production using ultracentrifugation, followed by size exclusion chromatography (SEC) to isolate the PMP-containing fractions. The eluted SEC fractions are analyzed for particle concentration (NanoFCM), median particle size (NanoFCM), and protein concentration (BCA).



FIG. 7B is a graph showing particle concentration per mL in eluted size exclusion chromatography (SEC) fractions (NanoFCM). The fractions containing the majority of PMPs (“PMP fraction”) are indicated with an arrow. PMPs are eluted in fractions 2-4.



FIG. 7C is a set of graphs and a table showing particle size in nm for selected SEC fractions, as measured using NanoFCM. The graphs show PMP size distribution in fractions 1, 3, 5, and 8.



FIG. 7D is a graph showing protein concentration in μg/mL in SEC fractions, as measured using a BCA assay. The fraction containing the majority of PMPs (“PMP fraction”) is labeled, and an arrow indicates a fraction containing contaminants.



FIG. 8A is a schematic diagram showing a protocol for scaled PMP production from 1 liter of grapefruit juice (˜7 grapefruits) using a juice press, followed by differential centrifugation to remove large debris, 100× concentration of the juice using TFF, and size exclusion chromatography (SEC) to isolate the PMP containing fractions. The SEC elution fractions are analyzed for particle concentration (NanoFCM), median particle size (NanoFCM) and protein concentration (BCA).



FIG. 8B is a pair of graphs showing protein concentration (BCA assay, top panel) and particle concentration (NanoFCM, bottom panel) of SEC eluate volume (ml) from a scaled starting material of 1000 ml of grapefruit juice, showing a high amount of contaminants in the late SEC elution volumes.



FIG. 8C is a graph showing that incubation of the crude grapefruit PMP fraction with a final concentration of 50 mM EDTA, pH 7.15 followed by overnight dialysis using a 300 kDa membrane, successfully removed contaminants present in the late SEC elution fractions, as shown by absorbance at 280 nm. There was no difference in the dialysis buffers used (PBS without calcium/magnesium pH 7.4, MES pH 6, Tris pH 8.6).



FIG. 8D is a graph showing that incubation of the crude grapefruit PMP fraction with a final concentration of 50 mM EDTA, pH 7.15, followed by overnight dialysis using a 300 kDa membrane, successfully removed contaminants present in the late elution fractions after SEC, as shown by BCA protein analysis, which, besides detecting protein, is sensitive to the presence of sugars and pectins. There was no difference in the dialysis buffers used (PBS without calcium/magnesium pH 7.4, MES pH 6, Tris pH 8.6).



FIG. 9A is a graph showing particle concentration (particles/ml) in eluted BMS plant cell culture SEC fractions, as measured by nano-flow cytometry (NanoFCM). PMPs were eluted in SEC fractions 4-6.



FIG. 9B is a graph showing absorbance at 280 nm (A.U.) in eluted BMS SEC fractions, measured on a SpectraMax® spectrophotometer. PMPs were eluted in fractions 4-6; fractions 9-13 contained contaminants.



FIG. 9C is a graph showing protein concentration (μg/ml) in eluted BMS SEC fractions, as determined by BCA analysis. PMPs were eluted in fractions 4-6; fractions 9-13 contained contaminants.



FIG. 9D is a scatter plot showing particles in the combined BMS PMP-containing SEC fractions as measured by nano-flow cytometry (NanoFCM). PMP concentration (particles/ml) was determined using a bead standard according to NanoFCM's instructions.



FIG. 9E is a graph showing the size distribution of BMS PMPs (nm) for the gated particles (background subtracted) of FIG. 6D. Median PMP size (nm) was determined using Exo bead standards according to NanoFCM's instructions.



FIG. 10 is a graph showing the luminescence (R.L.U., relative luminescence unit) of Pseudomonas aeruginosa bacteria that were treated with Ultrapure water (negative control), 3 ng free luciferase protein (protein only control) or with an effective luciferase protein dose of 3 ng by luciferase protein-loaded PMPs (PMP-Luc) in duplicate samples for 2 hrs at RT. Luciferase protein in the supernatant and pelleted bacteria was measured by luminescence using the ONE-Glo™ luciferase assay kit (Promega) and measured on a SpectraMax® spectrophotometer.



FIG. 11A is a Western blot showing insulin protein from insulin-loaded reconstructed PMPs recPMPs) that have been treated with a 1% Triton™ X-100 solution (Triton; Tx), a Proteinase K (ProtK) solution, a Tx solution followed by a ProtK solution, or a ProtK solution followed by a Tx solution. An untreated control is also shown.



FIG. 11B is a Western blot showing insulin protein from insulin-loaded recPMPs from lemon PMP lipids after incubation in simulated gastrointestinal fluids or a phosphate buffered saline (PBS) control at 37° C. PBS, pH 7.4, Fasted gastric fluid (Gastric Fasted), pH 1.6, 1 hour incubation; fasted intestinal fluid (Intestine Fasted), pH 6.4, 4 hour incubation; fed intestinal fluid (Intestine Fed), pH 5.8, 4 hour incubation.





DETAILED DESCRIPTION OF THE INVENTION
I. Definitions

As used herein, the term “encapsulate” or “encapsulated” refers to an enclosure of a moiety (e.g., an exogenous polypeptide as defined herein) within an enclosed lipid membrane structure, e.g., a lipid bilayer. The lipid membrane structure may be, e.g., a plant messenger pack (PMP) or a plant extracellular vesicle (EV), or may be obtained from or derived from a plant EV. An encapsulated moiety (e.g., an encapsulated exogenous polypeptide) is enclosed by the lipid membrane structure, e.g., such an encapsulated moiety is located in the lumen of the enclosed lipid membrane structure (e.g., the lumen of a PMP). The encapsulated moiety (e.g., the encapsulated polypeptide) may, in some instances, interact or associate with the inner face of the lipid membrane structure. The exogenous polypeptide may, in some instances, be intercalated with the lipid membrane structure. In some instances, the exogenous polypeptide has an extraluminal portion.


As used herein, the term “exogenous polypeptide” refers to a polypeptide (as is defined herein) that is encapsulated by a PMP (e.g., a PMP derived from a plant extracellular vesicle) that does not naturally occur in a plant lipid vesicle (e.g., does not naturally occur in a plant extracellular vesicle) or that is encapsulated in a PMP in an amount not found in a naturally occurring plant extracellular vesicle. The exogenous polypeptide may, in some instances, naturally occur in the plant from which the PMP is derived. In other instances, the exogenous polypeptide does not naturally occur in the plant from which the PMP is derived. The exogenous polypeptide may be artificially expressed in the plant from which the PMP is derived, e.g., may be a heterologous polypeptide. The exogenous polypeptide may be derived from another organism. In some aspects, the exogenous polypeptide is loaded into the PMP, e.g., using one or more of sonication, electroporation, lipid extraction, and lipid extrusion. The exogenous polypeptide may be, e.g., a therapeutic agent, an enzyme (e.g., a recombination enzyme or an editing enzyme), or a pathogen control agent.


As used herein, “delivering” or “contacting” refers to providing or applying a PMP composition (e.g., a PMP composition comprising an exogenous protein or peptide) to an organism, e.g., an animal, a plant, a fungus, or a bacterium. Delivery to an animal may be, e.g., oral delivery (e.g., delivery by feeding or by gavage) or systemic delivery (e.g., delivery by injection). The PMP composition may be delivered to the digestive tract, e.g., the stomach, the small intestine, or the large intestine. The PMP composition may be stable in the digestive tract.


As used herein, the term “animal” refers to humans, livestock, farm animals, invertebrates (e.g., insects), or mammalian veterinary animals (e.g., including for example, dogs, cats, horses, rabbits, zoo animals, cows, pigs, sheep, chickens, and non-human primates).


As used herein “decreasing the fitness of a pathogen” refers to any disruption to pathogen physiology as a consequence of administration of a PMP composition described herein, including, but not limited to, any one or more of the following desired effects: (1) decreasing a population of a pathogen by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (2) decreasing the reproductive rate of a pathogen by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (3) decreasing the mobility of a pathogen by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (4) decreasing the body weight or mass of a pathogen by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (5) decreasing the metabolic rate or activity of a pathogen by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; or (6) decreasing pathogen transmission (e.g., vertical or horizontal transmission of a pathogen from one insect to another) by a pathogen by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more. A decrease in pathogen fitness can be determined, e.g., in comparison to an untreated pathogen.


As used herein “decreasing the fitness of a vector” refers to any disruption to vector physiology, or any activity carried out by said vector, as a consequence of administration of a vector control composition described herein, including, but not limited to, any one or more of the following desired effects: (1) decreasing a population of a vector by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (2) decreasing the reproductive rate of a vector (e.g., insect, e.g., mosquito, tick, mite, louse) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (3) decreasing the mobility of a vector (e.g., insect, e.g., mosquito, tick, mite, louse) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (4) decreasing the body weight of a vector (e.g., insect, e.g., mosquito, tick, mite, louse) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (5) increasing the metabolic rate or activity of a vector (e.g., insect, e.g., mosquito, tick, mite, louse) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (6) decreasing vector-vector pathogen transmission (e.g., vertical or horizontal transmission of a vector from one insect to another) by a vector (e.g., insect, e.g., mosquito, tick, mite, louse) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (7) decreasing vector-animal pathogen transmission by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (8) decreasing vector (e.g., insect, e.g., mosquito, tick, mite, louse) lifespan by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; (9) increasing vector (e.g., insect, e.g., mosquito, tick, mite, louse) susceptibility to pesticides (e.g., insecticides) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more; or (10) decreasing vector competence by a vector (e.g., insect, e.g., mosquito, tick, mite, louse) by about 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, 100% or more. A decrease in vector fitness can be determined, e.g., in comparison to an untreated vector.


As used herein, the term “formulated for delivery to an animal” refers to a PMP composition that includes a pharmaceutically acceptable carrier.


As used herein, the term “formulated for delivery to a pathogen” refers to a PMP composition that includes a pharmaceutically acceptable or agriculturally acceptable carrier.


As used herein, the term “formulated for delivery to a vector” refers to a PMP composition that includes an agriculturally acceptable carrier.


As used herein, the term “infection” refers to the presence or colonization of a pathogen in an animal (e.g., in one or more parts of the animal), on an animal (e.g., on one or more parts of the animal), or in the habitat surrounding an animal, particularly where the infection decreases the fitness of the animal, e.g., by causing a disease, disease symptoms, or an immune (e.g., inflammatory) response.


As used herein the term “pathogen” refers to an organism, such as a microorganism or an invertebrate, which causes disease or disease symptoms in an animal by, e.g., (i) directly infecting the animal, (ii) by producing agents that causes disease or disease symptoms in an animal (e.g., bacteria that produce pathogenic toxins and the like), and/or (iii) that elicit an immune (e.g., inflammatory response) in animals (e.g., biting insects, e.g., bedbugs). As used herein, pathogens include, but are not limited to bacteria, protozoa, parasites, fungi, nematodes, insects, viroids and viruses, or any combination thereof, wherein each pathogen is capable, either by itself or in concert with another pathogen, of eliciting disease or symptoms in humans.


As used herein, the term polypeptide,” “peptide,” or “protein” encompasses any chain of naturally or non-naturally occurring amino acids (either D- or L-amino acids), regardless of length (e.g., at least 2, 3, 4, 5, 6, 7, 10, 12, 14, 16, 18, 20, 25, 30, 40, 50, 100, 150, 200, 250, 300, 350, 400, 450, 500, 550, 600, 650, 700, 750, 800, 850, 900, 950, 1000, or more than 1000 amino acids), the presence or absence of post-translational modifications (e.g., glycosylation or phosphorylation), or the presence of, e.g., one or more non-amino acyl groups (for example, sugar, lipid, etc.) covalently linked to the polypeptide, and includes, for example, natural polypeptides, synthetic or recombinant polypeptides, hybrid molecules, peptoids, or peptidomimetics. The polypeptide may be, e.g. at least 0.1, at least 1, at least 5, at least 10, at least 15, at least 20, at least 30, at least 40, at least 50, or more than 50 kD in size. The polypeptide may be a full-length protein. Alternatively, the polypeptide may comprise one or more domains of a protein.


As used herein, the term “antibody” encompasses an immunoglobulin, whether natural or partly or wholly synthetically produced, and fragments thereof, capable of specifically binding to an antigen. The term also covers any protein having a binding domain which is homologous to an immunoglobulin binding domain. These proteins can be derived iron natural sources, or partly or wholly synthetically produced. “Antibody” further includes a polypeptide comprising a framework region from an immunoglobulin gene or fragments thereof that specifically binds and recognizes an antigen. Use of the term “antibody” is meant to include whole antibodies, polyclonal, monoclonal and recombinant antibodies, fragments thereof, and further includes single-chain antibodies (nanobodies); humanized antibodies; murine antibodies; chimeric, mouse-human, mouse-primate, primate-human monoclonal antibodies, anti-idiotype antibodies, antibody fragments, such as, e.g., scFv, (scFv)2, Fab, Fab′; and F(ab′)2, F(ab1)2, Fv, dAb, and Fd fragments, diabodies, and antibody-related polypeptides. “Antibody” further includes bispecific antibodies and multispecific antibodies.


The term “antigen binding fragment”, as used herein, refers to fragments of an intact immunoglobulin, and any part of a polypeptide including antigen binding regions having the ability to specifically bind to the antigen. For example, the antigen binding fragment may be a F(ab′)2 fragment, a Fab′ fragment, a Fab fragment, a Fv fragment, or a scFv fragment, but is not limited thereto. A Fab fragment has one antigen binding site and contains the variable regions of a light chain and a heavy chain, the constant region of the light chain, and the first constant region CH1 of the heavy chain. A Fab′ fragment differs from a Fab fragment in that the Fab′ fragment additionally includes the hinge region of the heavy chain, including at least one cysteine residue at the C-terminal of the heavy chain CH1 region.


The F(ab′)2 fragment is produced whereby cysteine residues of the Fab′ fragment are joined by a disulfide bond at the hinge region. A Fv fragment is the minimal antibody fragment having only heavy chain variable regions and light chain variable regions, and a recombinant technique for producing the Fv fragment is well known in the art, Two-chain Fv fragments may have a structure in which heavy chain variable regions are linked to light chain variable regions by a non-covalent bond. Single-chain Fv (scFv) fragments generally may have a dimer structure as in the two-chain Fv fragments in which heavy chain variable regions are covalently bound to light chain variable regions via a peptide linker or heavy and light chain variable regions are directly linked to each other at the C-terminal thereof. The antigen binding fragment may be obtained using a protease (for example, a whole antibody is digested with papain to obtain Fab fragments, and is digested with pepsin to obtain F(ab′)2 fragments), and may be prepared by a genetic recombinant technique. A dAb fragment consists of a VH domain.


Single-chain antibody molecules may comprise a polymer with a number of individual molecules, for example, dimer, trimer or other polymers.


As used herein, the term “heterologous” refers to an agent (e.g., a polypeptide) that is either (1) exogenous to the plant (e.g., originating from a source that is not the plant or plant part from which the PMP is produced) (e.g., an agent which is added to the PMP using loading approaches described herein) or (2) endogenous to the plant cell or tissue from which the PMP is produced, but present in the PMP (e.g., added to the PMP using loading approaches described herein, genetic engineering, as well as in vitro or in vivo approaches) at a concentration that is higher than that found in nature (e.g., higher than a concentration found in a naturally-occurring plant extracellular vesicle).


As used herein, “percent identity” between two sequences is determined by the BLAST 2.0 algorithm, which is described in Altschul et al., (1990) J. Mol. Biol. 215:403-410. Software for performing BLAST analyses is publicly available through the National Center for Biotechnology Information.


As used herein, the term “plant” refers to whole plants, plant organs, plant tissues, seeds, plant cells, seeds, and progeny of the same. Plant cells include, without limitation, cells from seeds, suspension cultures, embryos, meristematic regions, callus tissue, leaves, roots, shoots, gametophytes, sporophytes, pollen, and microspores. Plant parts include differentiated and undifferentiated tissues including, but not limited to the following: roots, stems, shoots, leaves, pollen, seeds, fruit, harvested produce, tumor tissue, and various forms of cells and culture (e.g., single cells, protoplasts, embryos, and callus tissue). The plant tissue may be in a plant or in a plant organ, tissue, or cell culture. In addition, a plant may be genetically engineered to produce a heterologous protein or RNA.


As used herein, the term “plant extracellular vesicle”, “plant EV”, or “EV” refers to an enclosed lipid-bilayer structure naturally occurring in a plant. Optionally, the plant EV includes one or more plant EV markers. As used herein, the term “plant EV marker” refers to a component that is naturally associated with a plant, such as a plant protein, a plant nucleic acid, a plant small molecule, a plant lipid, or a combination thereof, including but not limited to any of the plant EV markers listed in the Appendix. In some instances, the plant EV marker is an identifying marker of a plant EV but is not a pesticidal agent. In some instances, the plant EV marker is an identifying marker of a plant EV and also a pesticidal agent (e.g., either associated with or encapsulated by the plurality of PMPs, or not directly associated with or encapsulated by the plurality of PMPs).


As used herein, the term “plant messenger pack” or “PMP” refers to a lipid structure (e.g., a lipid bilayer, unilamellar, multilamellar structure; e.g., a vesicular lipid structure), that is about 5-2000 nm (e.g., at least 5-1000 nm, at least 5-500 nm, at least 400-500 nm, at least 25-250 nm, at least 50-150 nm, or at least 70-120 nm) in diameter that is derived from (e.g., enriched, isolated or purified from) a plant source or segment, portion, or extract thereof, including lipid or non-lipid components (e.g., peptides, nucleic acids, or small molecules) associated therewith and that has been enriched, isolated or purified from a plant, a plant part, or a plant cell, the enrichment or isolation removing one or more contaminants or undesired components from the source plant. PMPs may be highly purified preparations of naturally occurring EVs. Preferably, at least 1% of contaminants or undesired components from the source plant are removed (e.g., at least 2%, 5%, 10%, 15%, 20%, 25%, 30%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 96%, 98%, 99%, or 100%) of one or more contaminants or undesired components from the source plant, e.g., plant cell wall components; pectin; plant organelles (e.g., mitochondria; plastids such as chloroplasts, leucoplasts or amyloplasts; and nuclei); plant chromatin (e.g., a plant chromosome); or plant molecular aggregates (e.g., protein aggregates, protein-nucleic acid aggregates, lipoprotein aggregates, or lipido-proteic structures). Preferably, a PMP is at least 30% pure (e.g., at least 40% pure, at least 50% pure, at least 60% pure, at least 70% pure, at least 80% pure, at least 90% pure, at least 99% pure, or 100% pure) relative to the one or more contaminants or undesired components from the source plant as measured by weight (w/w), spectral imaging (% transmittance), or conductivity (S/m).


In some instances, the PMP is a lipid extracted PMP (LPMP). As used herein, the terms “lipid extracted PMP” and “LPMP” refer to a PMP that has been derived from a lipid structure (e.g., a lipid bilayer, unilamellar, multilamellar structure; e.g., a vesicular lipid structure) derived from (e.g., enriched, isolated or purified from) a plant source, wherein the lipid structure is disrupted (e.g., disrupted by lipid extraction) and reassembled or reconstituted in a liquid phase (e.g., a liquid phase containing a cargo) using standard methods, e.g., reconstituted by a method comprising lipid film hydration and/or solvent injection, to produce the LPMP, as is described herein. The method may, if desired, further comprise sonication, freeze/thaw treatment, and/or lipid extrusion, e.g., to reduce the size of the reconstituted PMPs. A PMP (e.g., a LPMP) may comprise between 10% and 100% lipids derived from the lipid structure from the plant source, e.g., may contain at least 10%, at least 20%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 80%, at least 90%, at least 95%, or 100% lipids derived from the lipid structure from the plant source. A PMP (e.g., a LPMP) may comprise all or a fraction of the lipid species present in the lipid structure from the plant source, e.g., it may contain at least 10%, at least 20%, at least 30%, at least 40%, at least 50%, at least 60%, at least 70%, at least 80%, at least 90%, or 100% of the lipid species present in the lipid structure from the plant source. A PMP (e.g., a LPMP) may comprise none, a fraction, or all of the protein species present in the lipid structure from the plant source, e.g., may contain 0%, less than 1%, less than 5%, less than 10%, less than 15%, less than 20%, less than 30%, less than 40%, less than 50%, less than 60%, less than 70%, less than 80%, less than 90%, less than 100%, or 100% of the protein species present in the lipid structure from the plant source. In some instances, the lipid bilayer of the PMP (e.g., LPMP) does not contain proteins. In some instances, the lipid structure of the PMP (e.g., LPMP) contains a reduced amount of proteins relative to the lipid structure from the plant source.


PMPs (e.g., LPMPs) may optionally include exogenous lipids, e.g., lipids that are either (1) exogenous to the plant (e.g., originating from a source that is not the plant or plant part from which the PMP is produced) (e.g., added the PMP using methods described herein) or (2) endogenous to the plant cell or tissue from which the PMP is produced, but present in the PMP (e.g., added to the PMP using methods described herein, genetic engineering, in vitro or in vivo approaches) at a concentration that is higher than that found in nature (e.g., higher than a concentration found in a naturally-occurring plant extracellular vesicle). The lipid composition of the PMP may include 0%, less than 1%, or at least 1%, 2%, 5%, 10%, 15%, 20%, 25%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more than 95% exogenous lipid. Exemplary exogenous lipids include cationic lipids, ionizable lipids, zwitterionic lipids, and lipidoids.


PMPs may optionally include additional agents, such as polypeptides, therapeutic agents, polynucleotides, or small molecules. The PMPs can carry or associate with additional agents (e.g., polypeptides) in a variety of ways to enable delivery of the agent to a target plant, e.g., by encapsulating the agent, incorporation of the agent in the lipid bilayer structure, or association of the agent (e.g., by conjugation) with the surface of the lipid bilayer structure. Heterologous functional agents can be incorporated into the PMPs either in vivo (e.g., in planta) or in vitro (e.g., in tissue culture, in cell culture, or synthetically incorporated).


As used herein, the term “pure” refers to a PMP preparation in which at least a portion (e.g., at least 20%, 25%, 30%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 96%, 98%, 99%, or 100%) of plant cell wall components, plant organelles (e.g., mitochondria, chloroplasts, and nuclei), or plant molecule aggregates (protein aggregates, protein-nucleic acid aggregates, lipoprotein aggregates, or lipido-proteic structures) have been removed relative to the initial sample isolated from a plant, or part thereof.


As used herein, the term “repellent” refers to an agent, composition, or substance therein, that deters pathogen vectors (e.g., insects, e.g., mosquitos, ticks, mites, or lice) from approaching or remaining on an animal. A repellent may, for example, decrease the number of pathogen vectors on or in the vicinity of an animal, but may not necessarily kill or decreasing the fitness of the pathogen vector.


As used herein, the term “treatment” refers to administering a pharmaceutical composition to an animal or a plant for prophylactic and/or therapeutic purposes. To “prevent an infection” refers to prophylactic treatment of an animal or a plant that does not yet have a disease or condition, but which is susceptible to, or otherwise at risk of, a particular disease or condition. To “treat an infection” refers to administering treatment to an animal or a plant already suffering from a disease to improve or stabilize the animal's condition.


As used herein, the term “treat an infection” refers to administering treatment to an individual (e.g., a plant or an animal) already having a disease to improve or stabilize the individual's condition. This may involve reducing colonization of a pathogen in, on, or around an animal or a plant by one or more pathogens (e.g., by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%) relative to a starting amount and/or allow benefit to the individual (e.g., reducing colonization in an amount sufficient to resolve symptoms). In such instances, a treated infection may manifest as a decrease in symptoms (e.g., by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%). In some instances, a treated infection is effective to increase the likelihood of survival of an individual (e.g., an increase in likelihood of survival by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%) or increase the overall survival of a population (e.g., an increase in likelihood of survival by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%).


For example, the compositions and methods may be effective to “substantially eliminate” an infection, which refers to a decrease in the infection in an amount sufficient to sustainably resolve symptoms (e.g., for at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, or 12 months) in the animal or plant.


As used herein, the term “prevent an infection’ refers to preventing an increase in colonization in, on, or around an animal or plant by one or more pathogens (e.g., by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or more than 100% relative to an untreated animal or plant) in an amount sufficient to maintain an initial pathogen population (e.g., approximately the amount found in a healthy individual), prevent the onset of an infection, and/or prevent symptoms or conditions associated with infection. For example, an individual (e.g., an animal, e.g., a human) may receive prophylaxis treatment to prevent a fungal infection while being prepared for an invasive medical procedure (e.g., preparing for surgery, such as receiving a transplant, stem cell therapy, a graft, a prosthesis, receiving long-term or frequent intravenous catheterization, or receiving treatment in an intensive care unit), in immunocompromised individuals (e.g., individuals with cancer, with HIV/AIDS, or taking immunosuppressive agents), or in individuals undergoing long term antibiotic therapy.


As used herein, the term “stable PMP composition” (e.g., a composition including loaded or non-loaded PMPs) refers to a PMP composition that over a period of time (e.g., at least 24 hours, at least 48 hours, at least 1 week, at least 2 weeks, at least 3 weeks, at least 4 weeks, at least 30 days, at least 60 days, or at least 90 days) retains at least 5% (e.g., at least 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 100%) of the initial number of PMPs (e.g., PMPs per mL of solution) relative to the number of PMPs in the PMP composition (e.g., at the time of production or formulation) optionally at a defined temperature range (e.g., a temperature of at least 24° C. (e.g., at least 24° C., 25° C., 26° C., 27° C., 28° C., 29° C., or 30° C.), at least 20° C. (e.g., at least 20° C., 21° C., 22° C., or 23° C.), at least 4° C. (e.g., at least 5° C., 10° C., or 15° C.), at least −20° C. (e.g., at least −20° C., −15° C., −10° C., −5° C., or 0° C.), or −80° C. (e.g., at least −80° C., −70° C., −60° C., −50° C., −40° C., or −30° C.)); or retains at least 5% (e.g., at least 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 100%) of its activity relative to the initial activity of the PMP (e.g., at the time of production or formulation) optionally at a defined temperature range (e.g., a temperature of at least 24° C. (e.g., at least 24° C., 25° C., 26° C., 27° C., 28° C., 29° C., or 30° C.), at least 20° C. (e.g., at least 20° C., 21° C., 22° C., or 23° C.), at least 4° C. (e.g., at least 5° C., 10° C., or 15° C.), at least −20° C. (e.g., at least −20° C., −15° C., −10° C., −5° C., or 0° C.), or −80° C. (e.g., at least −80° C., −70° C., −60° C., −50° C., −40° C., or −30° C.)).


In some aspects, the stable PMP continues to encapsulate or remains associated with an exogenous polypeptide with which the PMP has been loaded, e.g., continues to encapsulate or remains associated with an exogenous polypeptide for at least 24 hours, at least 48 hours, at least 1 week, at least 2 weeks, at least 3 weeks, at least 4 weeks, at least 30 days, at least 60 days, at least 90 days, or 90 or more days.


As used herein, the term “vector” refers to an insect that can carry or transmit an animal pathogen from a reservoir to an animal. Exemplary vectors include insects, such as those with piercing-sucking mouthparts, as found in Hemiptera and some Hymenoptera and Diptera such as mosquitoes, bees, wasps, midges, lice, tsetse fly, fleas and ants, as well as members of the Arachnidae such as ticks and mites.


As used herein, the term “juice sac” or “juice vesicle” refers to a juice-containing membrane-bound component of the endocarp (carpel) of a hesperidium, e.g., a citrus fruit. In some aspects, the juice sacs are separated from other portions of the fruit, e.g., the rind (exocarp or flavedo), the inner rind (mesocarp, albedo, or pith), the central column (placenta), the segment walls, or the seeds. In some aspects, the juice sacs are juice sacs of a grapefruit, a lemon, a lime, or an orange.


II. PMPs Comprising an Encapsulated Polypeptide and Compositions Thereof

The present invention includes plant messenger packs (PMPs) and compositions including a plurality of plant messenger packs (PMP). A PMP is a lipid (e.g., lipid bilayer, unilamellar, or multilamellar structure) structure that includes a plant EV, or segment, portion, or extract (e.g., lipid extract) thereof. Plant EVs refer to an enclosed lipid-bilayer structure that naturally occurs in a plant and that is about 5-2000 nm in diameter. Plant EVs can originate from a variety of plant biogenesis pathways. In nature, plant EVs can be found in the intracellular and extracellular compartments of plants, such as the plant apoplast, the compartment located outside the plasma membrane and formed by a continuum of cell walls and the extracellular space. Alternatively, PMPs can be enriched plant EVs found in cell culture media upon secretion from plant cells. Plant EVs can be isolated from plants (e.g., from the apoplastic fluid or from extracellular media), thereby producing PMPs, by a variety of methods, further described herein.


The PMPs and PMP compositions described herein include PMPs comprising an exogenous polypeptide, e.g., an exogenous polypeptide described in Section III herein. The exogenous polypeptide may be, e.g., a therapeutic agent, a pathogen control agent (e.g., an agent having antipathogen activity (e.g., antibacterial, antifungal, antinematicidal, antiparasitic, or antiviral activity)), or an enzyme (e.g., a recombination enzyme or an editing enzyme.


The plurality of PMPs in a PMP composition may be loaded with the exogenous polypeptide such that at least 5%, at least 10%, at least 15%, at least 25%, at least 50%, at least 75%, at least 90%, or at least 95% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide.


PMPs can include plant EVs, or segments, portions, or extracts, thereof, in which the plant EVs are about 5-2000 nm in diameter. For example, the PMP can include a plant EV, or segment, portion, or extract thereof, that has a mean diameter of about 5-50 nm, about 50-100 nm, about 100-150 nm, about 150-200 nm, about 200-250 nm, about 250-300 nm, about 300-350 nm, about 350-400 nm, about 400-450 nm, about 450-500 nm, about 500-550 nm, about 550-600 nm, about 600-650 nm, about 650-700 nm, about 700-750 nm, about 750-800 nm, about 800-850 nm, about 850-900 nm, about 900-950 nm, about 950-1000 nm, about 1000-1250 nm, about 1250-1500 nm, about 1500-1750 nm, or about 1750-2000 nm. In some instances, the PMP includes a plant EV, or segment, portion, or extract thereof, that has a mean diameter of about 5-950 nm, about 5-900 nm, about 5-850 nm, about 5-800 nm, about 5-750 nm, about 5-700 nm, about 5-650 nm, about 5-600 nm, about 5-550 nm, about 5-500 nm, about 5-450 nm, about 5-400 nm, about 5-350 nm, about 5-300 nm, about 5-250 nm, about 5-200 nm, about 5-150 nm, about 5-100 nm, about 5-50 nm, or about 5-25 nm. In certain instances, the plant EV, or segment, portion, or extract thereof, has a mean diameter of about 50-200 nm. In certain instances, the plant EV, or segment, portion, or extract thereof, has a mean diameter of about 50-300 nm. In certain instances, the plant EV, or segment, portion, or extract thereof, has a mean diameter of about 200-500 nm. In certain instances, the plant EV, or segment, portion, or extract thereof, has a mean diameter of about 30-150 nm.


In some instances, the PMP may include a plant EV, or segment, portion, or extract thereof, that has a mean diameter of at least 5 nm, at least 50 nm, at least 100 nm, at least 150 nm, at least 200 nm, at least 250 nm, at least 300 nm, at least 350 nm, at least 400 nm, at least 450 nm, at least 500 nm, at least 550 nm, at least 600 nm, at least 650 nm, at least 700 nm, at least 750 nm, at least 800 nm, at least 850 nm, at least 900 nm, at least 950 nm, or at least 1000 nm. In some instances, the PMP includes a plant EV, or segment, portion, or extract thereof, that has a mean diameter less than 1000 nm, less than 950 nm, less than 900 nm, less than 850 nm, less than 800 nm, less than 750 nm, less than 700 nm, less than 650 nm, less than 600 nm, less than 550 nm, less than 500 nm, less than 450 nm, less than 400 nm, less than 350 nm, less than 300 nm, less than 250 nm, less than 200 nm, less than 150 nm, less than 100 nm, or less than 50 nm. A variety of methods (e.g., a dynamic light scattering method) standard in the art can be used to measure the particle diameter of the plant EVs, or segment, portion, or extract thereof.


In some instances, the PMP may include a plant EV, or segment, portion, or extract thereof, that has a mean surface area of 77 nm2 to 3.2×106 nm2 (e.g., 77-100 nm2, 100-1000 nm2, 1000-1×104 nm2, 1×104-1×105 nm2, 1×105-1×106 nm2, or 1×106-3.2×106 nm2). In some instances, the PMP may include a plant EV, or segment, portion, or extract thereof, that has a mean volume of 65 nm3 to 5.3×108 nm3 (e.g., 65-100 nm3, 100-1000 nm3, 1000-1×104 nm3, 1×104-1×105 nm3, 1×105-1×106 nm3, 1×106-1×107 nm3, 1×107-1×108 nm3, 1×108-5.3×108 nm3). In some instances, the PMP may include a plant EV, or segment, portion, or extract thereof, that has a mean surface area of at least 77 nm2, (e.g., at least 77 nm2, at least 100 nm2, at least 1000 nm2, at least 1×104 nm2, at least 1×105 nm2, at least 1×106 nm2, or at least 2×106 nm2). In some instances, the PMP may include a plant EV, or segment, portion, or extract thereof, that has a mean volume of at least 65 nm3 (e.g., at least 65 nm3, at least 100 nm3, at least 1000 nm3, at least 1×104 nm3, at least 1×105 nm3, at least 1×106 nm3, at least 1×107 nm3, at least 1×108 nm3, at least 2×108 nm3, at least 3×108 nm3, at least 4×108 nm3, or at least 5×108 nm3.


In some instances, the PMP can have the same size as the plant EV or segment, extract, or portion thereof. Alternatively, the PMP may have a different size than the initial plant EV from which the PMP is produced. For example, the PMP may have a diameter of about 5-2000 nm in diameter. For example, the PMP can have a mean diameter of about 5-50 nm, about 50-100 nm, about 100-150 nm, about 150-200 nm, about 200-250 nm, about 250-300 nm, about 300-350 nm, about 350-400 nm, about 400-450 nm, about 450-500 nm, about 500-550 nm, about 550-600 nm, about 600-650 nm, about 650-700 nm, about 700-750 nm, about 750-800 nm, about 800-850 nm, about 850-900 nm, about 900-950 nm, about 950-1000 nm, about 1000-1200 nm, about 1200-1400 nm, about 1400-1600 nm, about 1600-1800 nm, or about 1800-2000 nm. In some instances, the PMP may have a mean diameter of at least 5 nm, at least 50 nm, at least 100 nm, at least 150 nm, at least 200 nm, at least 250 nm, at least 300 nm, at least 350 nm, at least 400 nm, at least 450 nm, at least 500 nm, at least 550 nm, at least 600 nm, at least 650 nm, at least 700 nm, at least 750 nm, at least 800 nm, at least 850 nm, at least 900 nm, at least 950 nm, at least 1000 nm, at least 1200 nm, at least 1400 nm, at least 1600 nm, at least 1800 nm, or about 2000 nm. A variety of methods (e.g., a dynamic light scattering method) standard in the art can be used to measure the particle diameter of the PMPs. In some instances, the size of the PMP is determined following loading of heterologous functional agents, or following other modifications to the PMPs.


In some instances, the PMP may have a mean surface area of 77 nm2 to 1.3×107 nm2 (e.g., 77-100 nm2, 100-1000 nm2, 1000-1×104 nm2, 1×104-1×105 nm2, 1×105-1×106 nm2, or 1×106-1.3×107 nm2). In some instances, the PMP may have a mean volume of 65 nm3 to 4.2×109 nm3 (e.g., 65-100 nm3, 100-1000 nm3, 1000-1×104 nm3, 1×104-1×105 nm3, 1×105-1×106 nm3, 1×106-1×107 nm3, 1×107-1×108 nm3, 1×108-1×109 nm3, or 1×109-4.2×109 nm3). In some instances, the PMP has a mean surface area of at least 77 nm2, (e.g., at least 77 nm2, at least 100 nm2, at least 1000 nm2, at least 1×104 nm2, at least 1×105 nm2, at least 1×106 nm2, or at least 1×107 nm2). In some instances, the PMP has a mean volume of at least 65 nm3 (e.g., at least 65 nm3, at least 100 nm3, at least 1000 nm3, at least 1×104 nm3, at least 1×105 nm3, at least 1×106 nm3, at least 1×107 nm3, at least 1×108 nm3, at least 1×109 nm3, at least 2×109 nm3, at least 3×109 nm3, or at least 4×109 nm3).


In some instances, the PMP may include an intact plant EV. Alternatively, the PMP may include a segment, portion, or extract of the full surface area of the vesicle (e.g., a segment, portion, or extract including less than 100% (e.g., less than 90%, less than 80%, less than 70%, less than 60%, less than 50%, less than 40%, less than 30%, less than 20%, less than 10%, less than 10%, less than 5%, or less than 1%) of the full surface area of the vesicle) of a plant EV. The segment, portion, or extract may be any shape, such as a circumferential segment, spherical segment (e.g., hemisphere), curvilinear segment, linear segment, or flat segment. In instances where the segment is a spherical segment of the vesicle, the spherical segment may represent one that arises from the splitting of a spherical vesicle along a pair of parallel lines, or one that arises from the splitting of a spherical vesicle along a pair of non-parallel lines. Accordingly, the plurality of PMPs can include a plurality of intact plant EVs, a plurality of plant EV segments, portions, or extracts, or a mixture of intact and segments of plant EVs. One skilled in the art will appreciate that the ratio of intact to segmented plant EVs will depend on the particular isolation method used. For example, grinding or blending a plant, or part thereof, may produce PMPs that contain a higher percentage of plant EV segments, portions, or extracts than a non-destructive extraction method, such as vacuum-infiltration.


In instances where, the PMP includes a segment, portion, or extract of a plant EV, the EV segment, portion, or extract may have a mean surface area less than that of an intact vesicle, e.g., a mean surface area less than 77 nm2, 100 nm2, 1000 nm2, 1×104 nm2, 1×105 nm2, 1×106 nm2, or 3.2×106 nm2). In some instances, the EV segment, portion, or extract has a surface area of less than 70 nm2, 60 nm2, 50 nm2, 40 nm2, 30 nm2, 20 nm2, or 10 nm2). In some instances, the PMP may include a plant EV, or segment, portion, or extract thereof, that has a mean volume less than that of an intact vesicle, e.g., a mean volume of less than 65 nm3, 100 nm3, 1000 nm3, 1×104 nm3, 1×105 nm3, 1×106 nm3, 1×107 nm3, 1×108 nm3, or 5.3×108 nm3).


In instances where the PMP includes an extract of a plant EV, e.g., in instances where the PMP includes lipids extracted (e.g., with chloroform) from a plant EV, the PMP may include at least 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, 99%, or more than 99% of lipids extracted (e.g., with chloroform) from a plant EV. The PMPs in the plurality may include plant EV segments and/or plant EV-extracted lipids or a mixture thereof.


Further outlined herein are details regarding methods of producing PMPs, plant EV markers that can be associated with PMPs, and formulations for compositions including PMPs.


A. Production Methods

PMPs may be produced from plant EVs, or a segment, portion or extract (e.g., lipid extract) thereof, that occur naturally in plants, or parts thereof, including plant tissues or plant cells. An exemplary method for producing PMPs includes (a) providing an initial sample from a plant, or a part thereof, wherein the plant or part thereof comprises EVs; and (b) isolating a crude PMP fraction from the initial sample, wherein the crude PMP fraction has a decreased level of at least one contaminant or undesired component from the plant or part thereof relative to the level in the initial sample. The method can further include an additional step (c) comprising purifying the crude PMP fraction, thereby producing a plurality of pure PMPs, wherein the plurality of pure PMPs have a decreased level of at least one contaminant or undesired component from the plant or part thereof relative to the level in the crude EV fraction. Each production step is discussed in further detail, below. Exemplary methods regarding the isolation and purification of PMPs is found, for example, in Rutter and Innes, Plant Physiol. 173(1): 728-741, 2017; Rutter et al, Bio. Protoc. 7(17): e2533, 2017; Regente et al, J of Exp. Biol. 68(20): 5485-5496, 2017; Mu et al, Mol. Nutr. Food Res., 58, 1561-1573, 2014, and Regente et al, FEBS Letters. 583: 3363-3366, 2009, each of which is herein incorporated by reference.


For example, a plurality of PMPs may be isolated from a plant by a process which includes the steps of: (a) providing an initial sample from a plant, or a part thereof, wherein the plant or part thereof comprises EVs; (b) isolating a crude PMP fraction from the initial sample, wherein the crude PMP fraction has a decreased level of at least one contaminant or undesired component from the plant or part thereof relative to the level in the initial sample (e.g., a level that is decreased by at least 1%, 2%, 5%, 10%, 15%, 20%, 25%, 30%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 96%, 98%, 99%, or 100%); and (c) purifying the crude PMP fraction, thereby producing a plurality of pure PMPs, wherein the plurality of pure PMPs have a decreased level of at least one contaminant or undesired component from the plant or part thereof relative to the level in the crude EV fraction (e.g., a level that is decreased by at least 1%, 2%, 5%, 10%, 15%, 20%, 25%, 30%, 40%, 45%, 50%, 55%, 60%, 70%, 80%, 90%, 95%, 96%, 98%, 99%, or 100%).


The PMPs provided herein can include a plant EV, or segment, portion, or extract thereof, isolated from a variety of plants. PMPs may be isolated from any genera of plants (vascular or nonvascular), including but not limited to angiosperms (monocotyledonous and dicotyledonous plants), gymnosperms, ferns, selaginellas, horsetails, psilophytes, lycophytes, algae (e.g., unicellular or multicellular, e.g., archaeplastida), or bryophytes. In certain instances, PMPs can be produced from a vascular plant, for example monocotyledons or dicotyledons or gymnosperms. For example, PMPs can be produced from alfalfa, apple, Arabidopsis, banana, barley, canola, castor bean, chicory, chrysanthemum, clover, cocoa, coffee, cotton, cottonseed, corn, crambe, cranberry, cucumber, dendrobium, dioscorea, eucalyptus, fescue, flax, gladiolus, liliacea, linseed, millet, muskmelon, mustard, oat, oil palm, oilseed rape, papaya, peanut, pineapple, ornamental plants, Phaseolus, potato, rapeseed, rice, rye, ryegrass, safflower, sesame, sorghum, soybean, sugarbeet, sugarcane, sunflower, strawberry, tobacco, tomato, turfgrass, wheat or vegetable crops such as lettuce, celery, broccoli, cauliflower, cucurbits; fruit and nut trees, such as apple, pear, peach, orange, grapefruit, lemon, lime, almond, pecan, walnut, hazel; vines, such as grapes, kiwi, hops; fruit shrubs and brambles, such as raspberry, blackberry, gooseberry; forest trees, such as ash, pine, fir, maple, oak, chestnut, popular; with alfalfa, canola, castor bean, corn, cotton, crambe, flax, linseed, mustard, oil palm, oilseed rape, peanut, potato, rice, safflower, sesame, soybean, sugarbeet, sunflower, tobacco, tomato, or wheat.


PMPs may be produced from a whole plant (e.g., a whole rosettes or seedlings) or alternatively from one or more plant parts (e.g., leaf, seed, root, fruit, vegetable, pollen, phloem sap, or xylem sap). For example, PMPs can be produced from shoot vegetative organs/structures (e.g., leaves, stems, or tubers), roots, flowers and floral organs/structures (e.g., pollen, bracts, sepals, petals, stamens, carpels, anthers, or ovules), seed (including embryo, endosperm, or seed coat), fruit (the mature ovary), sap (e.g., phloem or xylem sap), plant tissue (e.g., vascular tissue, ground tissue, tumor tissue, or the like), and cells (e.g., single cells, protoplasts, embryos, callus tissue, guard cells, egg cells, or the like), or progeny of same. For instance, the isolation step may involve (a) providing a plant, or a part thereof, wherein the plant part is an Arabidopsis leaf. The plant may be at any stage of development. For example, the PMP can be produced from seedlings, e.g., 1 week, 2 week, 3 week, 4 week, 5 week, 6 week, 7 week, or 8 week old seedlings (e.g., Arabidopsis seedlings). Other exemplary PMPs can include PMPs produced from roots (e.g., ginger roots), fruit juice (e.g., grapefruit juice), vegetables (e.g., broccoli), pollen (e.g., olive pollen), phloem sap (e.g., Arabidopsis phloem sap), or xylem sap (e.g., tomato plant xylem sap). In some aspects, the PMP is produced from a citrus fruit, e.g., a grapefruit or a lemon.


PMPs can be produced from a plant, or part thereof, by a variety of methods. Any method that allows release of the EV-containing apoplastic fraction of a plant, or an otherwise extracellular fraction that contains PMPs comprising secreted EVs (e.g., cell culture media) is suitable in the present methods. EVs can be separated from the plant or plant part by either destructive (e.g., grinding or blending of a plant, or any plant part) or non-destructive (washing or vacuum infiltration of a plant or any plant part) methods. For instance, the plant, or part thereof, can be vacuum-infiltrated, ground, blended, or a combination thereof to isolate EVs from the plant or plant part, thereby producing PMPs. For instance, the isolating step may involve (b) isolating a crude PMP fraction from the initial sample (e.g., a plant, a plant part, or a sample derived from a plant or a plant part), wherein the crude PMP fraction has a decreased level of at least one contaminant or undesired component from the plant or part thereof relative to the level in the initial sample; wherein the isolating step involves vacuum infiltrating the plant (e.g., with a vesicle isolation buffer) to release and collect the apoplastic fraction. Alternatively, the isolating step may involve (b) grinding or blending the plant to release the EVs, thereby producing PMPs.


Upon isolating the plant EVs, thereby producing PMPs, the PMPs can be separated or collected into a crude PMP fraction (e.g., an apoplastic fraction). For instance, the separating step may involve separating the plurality of PMPs into a crude PMP fraction using centrifugation (e.g., differential centrifugation or ultracentrifugation) and/or filtration to separate the PMP-containing fraction from large contaminants, including plant tissue debris, plant cells, or plant cell organelles (e.g., nuclei or chloroplast). As such, the crude PMP fraction will have a decreased number of large contaminants, including, for example, plant tissue debris, plant cells, or plant cell organelles (e.g., nuclei, mitochondria or chloroplast), as compared to the initial sample from the source plant or plant part.


The crude PMP fraction can be further purified by additional purification methods to produce a plurality of pure PMPs. For example, the crude PMP fraction can be separated from other plant components by ultracentrifugation, e.g., using a density gradient (iodixanol or sucrose), size-exclusion, and/or use of other approaches to remove aggregated components (e.g., precipitation or size-exclusion chromatography). The resulting pure PMPs may have a decreased level of contaminants or undesired components from the source plant (e.g., one or more non-PMP components, such as protein aggregates, nucleic acid aggregates, protein-nucleic acid aggregates, free lipoproteins, lipido-proteic structures), nuclei, cell wall components, cell organelles, or a combination thereof) relative to one or more fractions generated during the earlier separation steps, or relative to a pre-established threshold level, e.g., a commercial release specification. For example, the pure PMPs may have a decreased level (e.g., by about 5%, 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or more than 100%; or by about 2× fold, 4× fold, 5× fold, 10× fold, 20× fold, 25× fold, 50× fold, 75× fold, 100× fold, or more than 100× fold) of plant organelles or cell wall components relative to the level in the initial sample. In some instances, the pure PMPs are substantially free (e.g., have undetectable levels) of one or more non-PMP components, such as protein aggregates, nucleic acid aggregates, protein-nucleic acid aggregates, free lipoproteins, lipido-proteic structures), nuclei, cell wall components, cell organelles, or a combination thereof. Further examples of the releasing and separation steps can be found in Example 1. The PMPs may be at a concentration of, e.g., 1×109, 5×109, 1×1010, 5×1010, 5×1010, 1×1011, 2×1011, 3×1011, 4×1011, 5×1011, 6×1011, 7×1011, 8×1011, 9×1011, 1×1012, 2×1012, 3×1012, 4×1012, 5×1012, 6×1012, 7×1012, 8×1012, 9×1012, 1×1013, or more than 1×1013 PMPs/mL.


For example, protein aggregates may be removed from isolated PMPs. For example, the isolated PMP solution can be taken through a range of pHs (e.g., as measured using a pH probe) to precipitate out protein aggregates in solution. The pH can be adjusted to, e.g., pH 3, pH 5, pH 7, pH 9, or pH 11 with the addition of, e.g., sodium hydroxide or hydrochloric acid. Once the solution is at the specified pH, it can be filtered to remove particulates. Alternatively, the isolated PMP solution can be flocculated using the addition of charged polymers, such as Polymin-P or Praestol 2640. Briefly, Polymin-P or Praestol 2640 is added to the solution and mixed with an impeller. The solution can then be filtered to remove particulates. Alternatively, aggregates can be solubilized by increasing salt concentration. For example NaCl can be added to the isolated PMP solution until it is at, e.g., 1 mol/L. The solution can then be filtered to isolate the PMPs. Alternatively, aggregates are solubilized by increasing the temperature. For example, the isolated PMPs can be heated under mixing until the solution has reached a uniform temperature of, e.g., 50° C. for 5 minutes. The PMP mixture can then be filtered to isolate the PMPs. Alternatively, soluble contaminants from PMP solutions can be separated by size-exclusion chromatography column according to standard procedures, where PMPs elute in the first fractions, whereas proteins and ribonucleoproteins and some lipoproteins are eluted later. The efficiency of protein aggregate removal can be determined by measuring and comparing the protein concentration before and after removal of protein aggregates via BCA/Bradford protein quantification. In some aspects, protein aggregates are removed before the exogenous polypeptide is encapsulated by the PMP. In other aspects, protein aggregates are removed after the exogenous polypeptide is encapsulated by the PMP.


Any of the production methods described herein can be supplemented with any quantitative or qualitative methods known in the art to characterize or identify the PMPs at any step of the production process. PMPs may be characterized by a variety of analysis methods to estimate PMP yield, PMP concentration, PMP purity, PMP composition, or PMP sizes. PMPs can be evaluated by a number of methods known in the art that enable visualization, quantitation, or qualitative characterization (e.g., identification of the composition) of the PMPs, such as microscopy (e.g., transmission electron microscopy), dynamic light scattering, nanoparticle tracking, spectroscopy (e.g., Fourier transform infrared analysis), or mass spectrometry (protein and lipid analysis). In certain instances, methods (e.g., mass spectroscopy) may be used to identify plant EV markers present on the PMP, such as markers disclosed in the Appendix. To aid in analysis and characterization, of the PMP fraction, the PMPs can additionally be labelled or stained. For example, the PMPs can be stained with 3,3′-dihexyloxacarbocyanine iodide (DIOC6), a fluorescent lipophilic dye, PKH67 (Sigma Aldrich); Alexa Fluor® 488 (Thermo Fisher Scientific), or DyLight™ 800 (Thermo Fisher). In the absence of sophisticated forms of nanoparticle tracking, this relatively simple approach quantifies the total membrane content and can be used to indirectly measure the concentration of PMPs (Rutter and Innes, Plant Physiol. 173(1): 728-741, 2017; Rutter et al, Bio. Protoc. 7(17): e2533, 2017). For more precise measurements, and to assess the size distributions of PMPs, nanoparticle tracking, nano flow cytometry, or Tunable Resistive Pulse Sensing can be used.


During the production process, the PMPs can optionally be prepared such that the PMPs are at an increased concentration (e.g., by about 5%, 10%, 15%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or more than 100%; or by about 2× fold, 4× fold, 5× fold, 10× fold, 20× fold, 25× fold, 50× fold, 75× fold, 100× fold, or more than 100× fold) relative to the EV level in a control or initial sample. The isolated PMPs may make up about 0.1% to about 100% of the PMP composition, such as any one of about 0.01% to about 100%, about 1% to about 99.9%, about 0.1% to about 10%, about 1% to about 25%, about 10% to about 50%, about 50% to about 99%, about. In some instances, the composition includes at least any of 0.1%, 0.5%, 1%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 95%, or more PMPs, e.g., as measured by wt/vol, percent PMP protein composition, and/or percent lipid composition (e.g., by measuring fluorescently labelled lipids); See, e.g., Example 3). In some instances, the concentrated agents are used as commercial products, e.g., the final user may use diluted agents, which have a substantially lower concentration of active ingredient. In some embodiments, the composition is formulated as a PMP concentrate formulation, e.g., an ultra-low-volume concentrate formulation. In some aspects, the PMPs in the composition are at a concentration effective to increase the fitness of an organism, e.g., a plant, an animal, an insect, a bacterium, or a fungus. In other aspects, the PMPs in the composition are at a concentration effective to decrease the fitness of an organism, e.g., a plant, an animal, an insect, a bacterium, or a fungus.


As illustrated by Example 1, PMPs can be produced from a variety of plants, or parts thereof (e.g., the leaf apoplast, seed apoplast, root, fruit, vegetable, pollen, phloem, or xylem sap). For example, PMPs can be released from the apoplastic fraction of a plant, such as the apoplast of a leaf (e.g., apoplast Arabidopsis thaliana leaves) or the apoplast of seeds (e.g., apoplast of sunflower seeds). Other exemplary PMPs are produced from roots (e.g., ginger roots), fruit juice (e.g., grapefruit juice), vegetables (e.g., broccoli), pollen (e.g., olive pollen), phloem sap (e.g., Arabidopsis phloem sap), xylem sap (e.g., tomato plant xylem sap), or cell culture supernatant (e.g. BY2 tobacco cell culture supernatant). This example further demonstrates the production of PMPs from these various plant sources.


As illustrated by Example 2, PMPs can be produced and purified by a variety of methods, for example, by using a density gradient (iodixanol or sucrose) in conjunction with ultracentrifugation and/or methods to remove aggregated contaminants, e.g., precipitation or size-exclusion chromatography. For instance, Example 2 illustrates purification of PMPs that have been obtained via the separation steps outlined in Example 1. Further, PMPs can be characterized in accordance with the methods illustrated in Example 3.


In some instances, the PMPs of the present compositions and methods can be isolated from a plant, or part thereof, and used without further modification to the PMP. In other instances, the PMP can be modified prior to use, as outlined further herein.


B. Plant EV-Markers

The PMPs of the present compositions and methods may have a range of markers that identify the PMP as being produced from a plant EV, and/or including a segment, portion, or extract thereof. As used herein, the term “plant EV-marker” refers to a component that is naturally associated with a plant and incorporated into or onto the plant EV in planta, such as a plant protein, a plant nucleic acid, a plant small molecule, a plant lipid, or a combination thereof. Examples of plant EV-markers can be found, for example, in Rutter and Innes, Plant Physiol. 173(1): 728-741, 2017; Raimondo et al., Oncotarget. 6(23): 19514, 2015; Ju et al., Mol. Therapy. 21(7):1345-1357, 2013; Wang et al., Molecular Therapy. 22(3): 522-534, 2014; and Regente et al, J of Exp. Biol. 68(20): 5485-5496, 2017; each of which is incorporated herein by reference. Additional examples of plant EV-markers are listed in the Appendix, and are further outlined herein.


The plant EV marker can include a plant lipid. Examples of plant lipid markers that may be found in the PMP include phytosterol, campesterol, β-sitosterol, stigmasterol, avenasterol, glycosyl inositol phosphoryl ceramides (GIPCs), glycolipids (e.g., monogalactosyldiacylglycerol (MGDG) or digalactosyldiacylglycerol (DGDG)), or a combination thereof. For instance, the PMP may include GIPCs, which represent the main sphingolipid class in plants and are one of the most abundant membrane lipids in plants. Other plant EV markers may include lipids that accumulate in plants in response to abiotic or biotic stressors (e.g., bacterial or fungal infection), such as phosphatidic acid (PA) or phosphatidylinositol-4-phosphate (PI4P).


Alternatively, the plant EV marker may include a plant protein. In some instances, the protein plant EV marker may be an antimicrobial protein naturally produced by plants, including defense proteins that plants secrete in response to abiotic or biotic stressors (e.g., bacterial or fungal infection). Plant pathogen defense proteins include soluble N-ethylmalemide-sensitive factor association protein receptor protein (SNARE) proteins (e.g., Syntaxin-121 (SYP121; GenBank Accession No.: NP_187788.1 or NP_974288.1), Penetration1 (PEN1; GenBank Accession No: NP_567462.1)) or ABC transporter Penetration3 (PEN3; GenBank Accession No: NP_191283.2). Other examples of plant EV markers includes proteins that facilitate the long-distance transport of RNA in plants, including phloem proteins (e.g., Phloem protein2-A1 (PP2-A1), GenBank Accession No: NP_193719.1), calcium-dependent lipid-binding proteins, or lectins (e.g., Jacalin-related lectins, e.g., Helianthus annuus jacalin (Helja; GenBank: AHZ86978.1). For example, the RNA binding protein may be Glycine-Rich RNA Binding Protein-7 (GRP7; GenBank Accession Number: NP_179760.1). Additionally, proteins that regulate plasmodesmata function can in some instances be found in plant EVs, including proteins such as Synap-Totgamin A A (GenBank Accession No: NP_565495.1). In some instances, the plant EV marker can include a protein involved in lipid metabolism, such as phospholipase C or phospholipase D. In some instances, the plant protein EV marker is a cellular trafficking protein in plants. In certain instances where the plant EV marker is a protein, the protein marker may lack a signal peptide that is typically associated with secreted proteins. Unconventional secretory proteins seem to share several common features like (i) lack of a leader sequence, (ii) absence of PTMs specific for ER or Golgi apparatus, and/or (iii) secretion not affected by brefeldin A which blocks the classical ER/Golgi-dependent secretion pathway. One skilled in the art can use a variety of tools freely accessible to the public (e.g., SecretomeP Database; SUBA3 (SUBcellular localization database for Arabidopsis proteins)) to evaluate a protein for a signal sequence, or lack thereof.


In instances where the plant EV marker is a protein, the protein may have an amino acid sequence having at least 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 99%, or 100% sequence identity to a plant EV marker, such as any of the plant EV markers listed in the Appendix. For example, the protein may have an amino acid sequence having at least 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 99%, or 100% sequence identity to PEN1 from Arabidopsis thaliana (GenBank Accession Number: NP_567462.1).


In some instances, the plant EV marker includes a nucleic acid encoded in plants, e.g., a plant RNA, a plant DNA, or a plant PNA. For example, the PMP may include dsRNA, mRNA, a viral RNA, a microRNA (miRNA), or a small interfering RNA (siRNA) encoded by a plant. In some instances, the nucleic acid may be one that is associated with a protein that facilitates the long-distance transport of RNA in plants, as discussed herein. In some instances, the nucleic acid plant EV marker may be one involved in host-induced gene silencing (HIGS), which is the process by which plants silence foreign transcripts of plant pests (e.g., pathogens such as fungi). For example, the nucleic acid may be one that silences bacterial or fungal genes. In some instances, the nucleic acid may be a microRNA, such as miR159 or miR166, which target genes in a fungal pathogen (e.g., Verticillium dahliae). In some instances, the protein may be one involved in carrying plant defense compounds, such as proteins involved in glucosinolate (GSL) transport and metabolism, including Glucosinolate Transporter-1-1 (GTR1; GenBank Accession No: NP_566896.2), Glucosinolate Transporter-2 (GTR2; NP_201074.1), orEpithiospecific Modifier 1 (ESM1; NP_188037.1).


In instances where the plant EV marker is a nucleic acid, the nucleic acid may have a nucleotide sequence having at least 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 99%, or 100% sequence identity to a plant EV marker, e.g., such as those encoding the plant EV markers listed in the Appendix. For example, the nucleic acid may have a polynucleotide sequence having at least 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 98%, 99%, or 100% sequence identity to miR159 or miR166.


In some instances, the plant EV marker includes a compound produced by plants. For example, the compound may be a defense compound produced in response to abiotic or biotic stressors, such as secondary metabolites. One such secondary metabolite that be found in PMPs are glucosinolates (GSLs), which are nitrogen and sulfur-containing secondary metabolites found mainly in Brassicaceae plants. Other secondary metabolites may include allelochemicals.


In some instances, the PMP may also be identified as being produced from a plant EV based on the lack of certain markers (e.g., lipids, polypeptides, or polynucleotides) that are not typically produced by plants, but are generally associated with other organisms (e.g., markers of animal EVs, bacterial EVs, or fungal EVs). For example, in some instances, the PMP lacks lipids typically found in animal EVs, bacterial EVs, or fungal EVs. In some instances, the PMP lacks lipids typical of animal EVs (e.g., sphingomyelin). In some instances, the PMP does not contain lipids typical of bacterial EVs or bacterial membranes (e.g., LPS). In some instances, the PMP lacks lipids typical of fungal membranes (e.g., ergosterol).


Plant EV markers can be identified using any approaches known in the art that enable identification of small molecules (e.g., mass spectroscopy, mass spectrometry), lipds (e.g., mass spectroscopy, mass spectrometry), proteins (e.g., mass spectroscopy, immunoblotting), or nucleic acids (e.g., PCR analysis). In some instances, a PMP composition described herein includes a detectable amount, e.g., a pre-determined threshold amount, of a plant EV marker described herein.


C. Pharmaceutical Formulations

Included herein are PMP compositions that can be formulated into pharmaceutical compositions, e.g., for administration to an animal, such as a human. The pharmaceutical composition may be administered to an animal with a pharmaceutically acceptable diluent, carrier, and/or excipient. Depending on the mode of administration and the dosage, the pharmaceutical composition of the methods described herein will be formulated into suitable pharmaceutical compositions to permit facile delivery. The single dose may be in a unit dose form as needed.


A PMP composition may be formulated for e.g., oral administration, intravenous administration (e.g., injection or infusion), or subcutaneous administration to an animal (e.g., a human). For injectable formulations, various effective pharmaceutical carriers are known in the art (See, e.g., Remington: The Science and Practice of Pharmacy, 22nd ed., (2012) and ASHP Handbook on Injectable Drugs, 18th ed., (2014)).


Pharmaceutically acceptable carriers and excipients in the present compositions are nontoxic to recipients at the dosages and concentrations employed. Acceptable carriers and excipients may include buffers such as phosphate, citrate, HEPES, and TAE, antioxidants such as ascorbic acid and methionine, preservatives such as hexamethonium chloride, octadecyldimethylbenzyl ammonium chloride, resorcinol, and benzalkonium chloride, proteins such as human serum albumin, gelatin, dextran, and immunoglobulins, hydrophilic polymers such as polyvinylpyrrolidone, amino acids such as glycine, glutamine, histidine, and lysine, and carbohydrates such as glucose, mannose, sucrose, and sorbitol. The compositions may be formulated according to conventional pharmaceutical practice. The concentration of the compound in the formulation will vary depending upon a number of factors, including the dosage of the active agent (e.g., the exogenous polypeptide encapsulated by the PMP) to be administered, and the route of administration.


For oral administration to an animal, the PMP composition can be prepared in the form of an oral formulation. Formulations for oral use can include tablets, caplets, capsules, syrups, or oral liquid dosage forms containing the active ingredient(s) in a mixture with non-toxic pharmaceutically acceptable excipients. These excipients may be, for example, inert diluents or fillers (e.g., sucrose, sorbitol, sugar, mannitol, microcrystalline cellulose, starches including potato starch, calcium carbonate, sodium chloride, lactose, calcium phosphate, calcium sulfate, or sodium phosphate); granulating and disintegrating agents (e.g., cellulose derivatives including microcrystalline cellulose, starches including potato starch, croscarmellose sodium, alginates, or alginic acid); binding agents (e.g., sucrose, glucose, sorbitol, acacia, alginic acid, sodium alginate, gelatin, starch, pregelatinized starch, microcrystalline cellulose, magnesium aluminum silicate, carboxymethylcellulose sodium, methylcellulose, hydroxypropyl methylcellulose, ethylcellulose, polyvinylpyrrolidone, or polyethylene glycol); and lubricating agents, glidants, and antiadhesives (e.g., magnesium stearate, zinc stearate, stearic acid, silicas, hydrogenated vegetable oils, or talc). Other pharmaceutically acceptable excipients can be colorants, flavoring agents, plasticizers, humectants, buffering agents, and the like. Formulations for oral use may also be provided in unit dosage form as chewable tablets, non-chewable tablets, caplets, capsules (e.g., as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, or as soft gelatin capsules wherein the active ingredient is mixed with water or an oil medium). The compositions disclosed herein may also further include an immediate-release, extended release or delayed-release formulation.


For parenteral administration to an animal, the PMP compositions may be formulated in the form of liquid solutions or suspensions and administered by a parenteral route (e.g., topical, subcutaneous, intravenous, or intramuscular). The pharmaceutical composition can be formulated for injection or infusion. Pharmaceutical compositions for parenteral administration can be formulated using a sterile solution or any pharmaceutically acceptable liquid as a vehicle. Pharmaceutically acceptable vehicles include, but are not limited to, sterile water, physiological saline, or cell culture media (e.g., Dulbecco's Modified Eagle Medium (DMEM), α-Modified Eagles Medium (α-MEM), F-12 medium). Formulation methods are known in the art, see e.g., Gibson (ed.) Pharmaceutical Preformulation and Formulation (2nd ed.) Taylor & Francis Group, CRC Press (2009).


D. Agricultural Formulations

Included herein are PMP compositions that can be formulated into agricultural compositions, e.g., for administration to pathogen or pathogen vector (e.g., an insect). The agricultural composition may be administered to a pathogen or pathogen vector (e.g., an insect) with an agriculturally acceptable diluent, carrier, and/or excipient. Further examples of agricultural formulations useful in the present compositions and methods are further outlined herein.


To allow ease of application, handling, transportation, storage, and activity, the active agent, here PMPs, can be formulated with other substances. PMPs can be formulated into, for example, baits, concentrated emulsions, dusts, emulsifiable concentrates, fumigants, gels, granules, microencapsulations, seed treatments, suspension concentrates, suspoemulsions, tablets, water soluble liquids, water dispersible granules or dry flowables, wettable powders, and ultra-low volume solutions. For further information on formulation types see “Catalogue of Pesticide Formulation Types and International Coding System” Technical Monograph n° 2, 5th Edition by CropLife International (2002).


Active agents (e.g., PMPs comprising an exogenous polypeptide) can be applied most often as aqueous suspensions or emulsions prepared from concentrated formulations of such agents. Such water-soluble, water-suspendable, or emulsifiable formulations are either solids, usually known as wettable powders, or water dispersible granules, or liquids usually known as emulsifiable concentrates, or aqueous suspensions. Wettable powders, which may be compacted to form water dispersible granules, comprise an intimate mixture of the pesticide, a carrier, and surfactants. The carrier is usually selected from among the attapulgite clays, the montmorillonite clays, the diatomaceous earths, or the purified silicates. Effective surfactants, including from about 0.5% to about 10% of the wettable powder, are found among sulfonated lignins, condensed naphthalenesulfonates, naphthalenesulfonates, alkylbenzenesulfonates, alkyl sulfates, and non-ionic surfactants such as ethylene oxide adducts of alkyl phenols.


Emulsifiable concentrates can comprise a suitable concentration of PMPs, such as from about 50 to about 500 grams per liter of liquid dissolved in a carrier that is either a water miscible solvent or a mixture of water-immiscible organic solvent and emulsifiers. Useful organic solvents include aromatics, especially xylenes and petroleum fractions, especially the high-boiling naphthalenic and olefinic portions of petroleum such as heavy aromatic naphtha. Other organic solvents may also be used, such as the terpenic solvents including rosin derivatives, aliphatic ketones such as cyclohexanone, and complex alcohols such as 2-ethoxyethanol. Suitable emulsifiers for emulsifiable concentrates are selected from conventional anionic and non-ionic surfactants.


Aqueous suspensions comprise suspensions of water-insoluble pesticides dispersed in an aqueous carrier at a concentration in the range from about 5% to about 50% by weight. Suspensions are prepared by finely grinding the pesticide and vigorously mixing it into a carrier comprised of water and surfactants. Ingredients, such as inorganic salts and synthetic or natural gums may also be added, to increase the density and viscosity of the aqueous carrier.


PMPs may also be applied as granular compositions that are particularly useful for applications to the soil. Granular compositions usually contain from about 0.5% to about 10% by weight of the pesticide, dispersed in a carrier that includes clay or a similar substance. Such compositions are usually prepared by dissolving the formulation in a suitable solvent and applying it to a granular carrier which has been pre-formed to the appropriate particle size, in the range of from about 0.5 to about 3 mm. Such compositions may also be formulated by making a dough or paste of the carrier and compound and crushing and drying to obtain the desired granular particle size.


Dusts containing the present PMP formulation are prepared by intimately mixing PMPs in powdered form with a suitable dusty agricultural carrier, such as kaolin clay, ground volcanic rock, and the like. Dusts can suitably contain from about 1% to about 10% of the packets. They can be applied as a seed dressing or as a foliage application with a dust blower machine.


It is equally practical to apply the present formulation in the form of a solution in an appropriate organic solvent, usually petroleum oil, such as the spray oils, which are widely used in agricultural chemistry.


PMPs can also be applied in the form of an aerosol composition. In such compositions the packets are dissolved or dispersed in a carrier, which is a pressure-generating propellant mixture. The aerosol composition is packaged in a container from which the mixture is dispensed through an atomizing valve.


Another embodiment is an oil-in-water emulsion, wherein the emulsion includes oily globules which are each provided with a lamellar liquid crystal coating and are dispersed in an aqueous phase, wherein each oily globule includes at least one compound which is agriculturally active, and is individually coated with a monolamellar or oligolamellar layer including: (1) at least one non-ionic lipophilic surface-active agent, (2) at least one non-ionic hydrophilic surface-active agent and (3) at least one ionic surface-active agent, wherein the globules having a mean particle diameter of less than 800 nanometers. Further information on the embodiment is disclosed in U.S. patent publication 20070027034 published Feb. 1, 2007. For ease of use, this embodiment will be referred to as “OIWE.”


Additionally, generally, when the molecules disclosed above are used in a formulation, such formulation can also contain other components. These components include, but are not limited to, (this is a non-exhaustive and non-mutually exclusive list) wetters, spreaders, stickers, penetrants, buffers, sequestering agents, drift reduction agents, compatibility agents, anti-foam agents, cleaning agents, and emulsifiers. A few components are described forthwith.


A wetting agent is a substance that when added to a liquid increases the spreading or penetration power of the liquid by reducing the interfacial tension between the liquid and the surface on which it is spreading. Wetting agents are used for two main functions in agrochemical formulations: during processing and manufacture to increase the rate of wetting of powders in water to make concentrates for soluble liquids or suspension concentrates; and during mixing of a product with water in a spray tank to reduce the wetting time of wettable powders and to improve the penetration of water into water-dispersible granules. Examples of wetting agents used in wettable powder, suspension concentrate, and water-dispersible granule formulations are: sodium lauryl sulfate; sodium dioctyl sulfosuccinate; alkyl phenol ethoxylates; and aliphatic alcohol ethoxylates.


A dispersing agent is a substance which adsorbs onto the surface of particles and helps to preserve the state of dispersion of the particles and prevents them from reaggregating. Dispersing agents are added to agrochemical formulations to facilitate dispersion and suspension during manufacture, and to ensure the particles redisperse into water in a spray tank. They are widely used in wettable powders, suspension concentrates and water-dispersible granules. Surfactants that are used as dispersing agents have the ability to adsorb strongly onto a particle surface and provide a charged or steric barrier to reaggregation of particles. The most commonly used surfactants are anionic, non-ionic, or mixtures of the two types. For wettable powder formulations, the most common dispersing agents are sodium lignosulfonates. For suspension concentrates, very good adsorption and stabilization are obtained using polyelectrolytes, such as sodium naphthalene sulfonate formaldehyde condensates. Tristyrylphenol ethoxylate phosphate esters are also used. Non-ionics such as alkylarylethylene oxide condensates and EO-PO block copolymers are sometimes combined with anionics as dispersing agents for suspension concentrates. In recent years, new types of very high molecular weight polymeric surfactants have been developed as dispersing agents. These have very long hydrophobic ‘backbones’ and a large number of ethylene oxide chains forming the ‘teeth’ of a ‘comb’ surfactant. These high molecular weight polymers can give very good long-term stability to suspension concentrates because the hydrophobic backbones have many anchoring points onto the particle surfaces. Examples of dispersing agents used in agrochemical formulations are: sodium lignosulfonates; sodium naphthalene sulfonate formaldehyde condensates; tristyrylphenol ethoxylate phosphate esters; aliphatic alcohol ethoxylates; alkyl ethoxylates; EO-PO (ethylene oxide-propylene oxide) block copolymers; and graft copolymers.


An emulsifying agent is a substance which stabilizes a suspension of droplets of one liquid phase in another liquid phase. Without the emulsifying agent the two liquids would separate into two immiscible liquid phases. The most commonly used emulsifier blends contain alkylphenol or aliphatic alcohol with twelve or more ethylene oxide units and the oil-soluble calcium salt of dodecylbenzenesulfonic acid. A range of hydrophile-lipophile balance (“HLB”) values from 8 to 18 will normally provide good stable emulsions. Emulsion stability can sometimes be improved by the addition of a small amount of an EO-PO block copolymer surfactant.


A solubilizing agent is a surfactant which will form micelles in water at concentrations above the critical micelle concentration. The micelles are then able to dissolve or solubilize water-insoluble materials inside the hydrophobic part of the micelle. The types of surfactants usually used for solubilization are non-ionics, sorbitan monooleates, sorbitan monooleate ethoxylates, and methyl oleate esters.


Surfactants are sometimes used, either alone or with other additives such as mineral or vegetable oils as adjuvants to spray-tank mixes to improve the biological performance of the pesticide on the target. The types of surfactants used for bioenhancement depend generally on the nature and mode of action of the pesticide. However, they are often non-ionics such as: alkyl ethoxylates; linear aliphatic alcohol ethoxylates; aliphatic amine ethoxylates.


A carrier or diluent in an agricultural formulation is a material added to the pesticide to give a product of the required strength. Carriers are usually materials with high absorptive capacities, while diluents are usually materials with low absorptive capacities. Carriers and diluents are used in the formulation of dusts, wettable powders, granules, and water-dispersible granules.


Organic solvents are used mainly in the formulation of emulsifiable concentrates, oil-in-water emulsions, suspoemulsions, and ultra low volume formulations, and to a lesser extent, granular formulations. Sometimes mixtures of solvents are used. The first main groups of solvents are aliphatic paraffinic oils such as kerosene or refined paraffins. The second main group (and the most common) includes the aromatic solvents such as xylene and higher molecular weight fractions of C9 and C10 aromatic solvents. Chlorinated hydrocarbons are useful as cosolvents to prevent crystallization of pesticides when the formulation is emulsified into water. Alcohols are sometimes used as cosolvents to increase solvent power. Other solvents may include vegetable oils, seed oils, and esters of vegetable and seed oils.


Thickeners or gelling agents are used mainly in the formulation of suspension concentrates, emulsions, and suspoemulsions to modify the rheology or flow properties of the liquid and to prevent separation and settling of the dispersed particles or droplets. Thickening, gelling, and anti-settling agents generally fall into two categories, namely water-insoluble particulates and water-soluble polymers. It is possible to produce suspension concentrate formulations using clays and silicas. Examples of these types of materials, include, but are not limited to, montmorillonite, bentonite, magnesium aluminum silicate, and attapulgite. Water-soluble polysaccharides have been used as thickening-gelling agents for many years. The types of polysaccharides most commonly used are natural extracts of seeds and seaweeds or are synthetic derivatives of cellulose. Examples of these types of materials include, but are not limited to, guar gum; locust bean gum; carrageenam; alginates; methyl cellulose; sodium carboxymethyl cellulose (SCMC); hydroxyethyl cellulose (HEC). Other types of anti-settling agents are based on modified starches, polyacrylates, polyvinyl alcohol, and polyethylene oxide. Another good anti-settling agent is xanthan gum.


Microorganisms can cause spoilage of formulated products. Therefore preservation agents are used to eliminate or reduce their effect. Examples of such agents include, but are not limited to: propionic acid and its sodium salt; sorbic acid and its sodium or potassium salts; benzoic acid and its sodium salt; p-hydroxybenzoic acid sodium salt; methyl p-hydroxybenzoate; and 1,2-benzisothiazolin-3-one (BIT).


The presence of surfactants often causes water-based formulations to foam during mixing operations in production and in application through a spray tank. In order to reduce the tendency to foam, anti-foam agents are often added either during the production stage or before filling into bottles. Generally, there are two types of anti-foam agents, namely silicones and non-silicones. Silicones are usually aqueous emulsions of dimethyl polysiloxane, while the non-silicone anti-foam agents are water-insoluble oils, such as octanol and nonanol, or silica. In both cases, the function of the anti-foam agent is to displace the surfactant from the air-water interface.


“Green” agents (e.g., adjuvants, surfactants, solvents) can reduce the overall environmental footprint of crop protection formulations. Green agents are biodegradable and generally derived from natural and/or sustainable sources, e.g., plant and animal sources. Specific examples are: vegetable oils, seed oils, and esters thereof, also alkoxylated alkyl polyglucosides.


In some instances, PMPs can be freeze-dried or lyophilized. See U.S. Pat. No. 4,311,712. The PMPs can later be reconstituted on contact with water or another liquid. Other components can be added to the lyophilized or reconstituted liposomes, for example, other antipathogen agents, pesticidal agents, repellent agents, agriculturally acceptable carriers, or other materials in accordance with the formulations described herein.


Other optional features of the composition include carriers or delivery vehicles that protect the PMP composition against UV and/or acidic conditions. In some instances, the delivery vehicle contains a pH buffer. In some instances, the composition is formulated to have a pH in the range of about 4.5 to about 9.0, including for example pH ranges of about any one of 5.0 to about 8.0, about 6.5 to about 7.5, or about 6.5 to about 7.0.


The composition may additionally be formulated with an attractant (e.g., a chemoattractant) that attracts a pest, such as a pathogen vector (e.g., an insect), to the vicinity of the composition. Attractants include pheromones, a chemical that is secreted by an animal, especially a pest, or chemoattractants which influences the behavior or development of others of the same species. Other attractants include sugar and protein hydrolysate syrups, yeasts, and rotting meat. Attractants also can be combined with an active ingredient and sprayed onto foliage or other items in the treatment area. Various attractants are known which influence a pest's behavior as a pest's search for food, oviposition, or mating sites, or mates. Attractants useful in the methods and compositions described herein include, for example, eugenol, phenethyl propionate, ethyl dimethylisobutyl-cyclopropane carboxylate, propyl benszodioxancarboxylate, cis-7,8-epoxy-2-methyloctadecane, trans-8,trans-0-dodecadienol, cis-9-tetradecenal (with cis-11-hexadecenal), trans-11-tetradecenal, cis-11-hexadecenal, (Z)-11,12-hexadecadienal, cis-7-dodecenyl acetate, cis-8-dodecenyul acetate, cis-9-dodecenyl acetate, cis-9-tetradecenyl acetate, cis-11-tetradecenyl acetate, trans-11-tetradecenyl acetate (with cis-11), cis-9,trans-11-tetradecadienyl acetate (with cis-9,trans-12), cis-9,trans-12-tetradecadienyl acetate, cis-7,cis-11-hexadecadienyl acetate (with cis-7,trans-11), cis-3,cis-13-octadecadienyl acetate, trans-3,cis-13-octadecadienyl acetate, anethole and isoamyl salicylate.


For further information on agricultural formulations, see “Chemistry and Technology of Agrochemical Formulations” edited by D. A. Knowles, copyright 1998 by Kluwer Academic Publishers. Also see “Insecticides in Agriculture and Environment—Retrospects and Prospects” by A. S. Perry, I. Yamamoto, I. Ishaaya, and R. Perry, copyright 1998 by Springer-Verlag.


III. Exogenous Polypeptides

The present invention includes plant messenger packs (PMPs) and PMP compositions wherein the PMP encapsulates an exogenous polypeptide. The exogenous polypeptide may be enclosed within the PMP, e.g., located inside the lipid membrane structure, e.g., separated from the surrounding material or solution by both leaflets of a lipid bilayer. In some aspects, the encapsulated exogenous polypeptide may interact or associate with the inner lipid membrane of the PMP. In some aspects, the encapsulated exogenous polypeptide may interact or associate with the outer lipid membrane of the PMP. The exogenous polypeptide may, in some instances, be intercalated with the lipid membrane structure. In some instances, the exogenous polypeptide has an extraluminal portion. In some instances, the exogenous polypeptide is conjugated to the outer surface of the lipid membrane structure, e.g., using click chemistry.


The exogenous polypeptide may be a polypeptide that does not naturally occur in a plant EV. Alternatively, the exogenous polypeptide may be a polypeptide that naturally occurs in a plant EV, but that is encapsulated in a PMP in an amount not found in a naturally occurring plant extracellular vesicle. The exogenous polypeptide may, in some instances, naturally occur in the plant from which the PMP is derived. In other instances, the exogenous polypeptide does not naturally occur in the plant from which the PMP is derived. The exogenous polypeptide may be artificially expressed in the plant from which the PMP is derived, e.g., may be a heterologous polypeptide. The exogenous polypeptide may be derived from another organism. In some aspects, the exogenous polypeptide is loaded into the PMP, e.g., using one or more of sonication, electroporation, lipid extraction, and lipid extrusion.


Polypeptides included herein may include naturally occurring polypeptides or recombinantly produced variants. In some instances, the polypeptide may be a functional fragments or variants thereof (e.g., an enzymatically active fragment or variant thereof). For example, the polypeptide may be a functionally active variant of any of the polypeptides described herein with at least 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% identity, e.g., over a specified region or over the entire sequence, to a sequence of a polypeptide described herein or a naturally occurring polypeptide. In some instances, the polypeptide may have at least 50% (e.g., at least 50%, 60%, 70%, 80%, 90%, 95%, 97%, 99%, or greater) identity to a polypeptide of interest.


The polypeptides described herein may be formulated in a composition for any of the uses described herein. The compositions disclosed herein may include any number or type (e.g., classes) of polypeptides, such as at least about any one of 1 polypeptide, 2, 3, 4, 5, 10, 15, 20, or more polypeptides. A suitable concentration of each polypeptide in the composition depends on factors such as efficacy, stability of the polypeptide, number of distinct polypeptides in the composition, the formulation, and methods of application of the composition. In some instances, each polypeptide in a liquid composition is from about 0.1 ng/mL to about 100 mg/mL. In some instances, each polypeptide in a solid composition is from about 0.1 ng/g to about 100 mg/g.


Methods of making a polypeptide are routine in the art. See, in general, Smales & James (Eds.), Therapeutic Proteins: Methods and Protocols (Methods in Molecular Biology), Humana Press (2005); and Crommelin, Sindelar & Meibohm (Eds.), Pharmaceutical Biotechnology: Fundamentals and Applications, Springer (2013).


Methods for producing a polypeptide involve expression in plant cells, although recombinant proteins can also be produced using insect cells, yeast, bacteria, mammalian cells, or other cells under the control of appropriate promoters. Mammalian expression vectors may comprise nontranscribed elements such as an origin of replication, a suitable promoter and enhancer, and other 5′ or 3′ flanking nontranscribed sequences, and 5′ or 3′ nontranslated sequences such as necessary ribosome binding sites, a polyadenylation site, splice donor and acceptor sites, and termination sequences. DNA sequences derived from the SV40 viral genome, for example, SV40 origin, early promoter, enhancer, splice, and polyadenylation sites may be used to provide the other genetic elements required for expression of a heterologous DNA sequence. Appropriate cloning and expression vectors for use with bacterial, fungal, yeast, and mammalian cellular hosts are described in Green & Sambrook, Molecular Cloning: A Laboratory Manual (Fourth Edition), Cold Spring Harbor Laboratory Press (2012).


Various mammalian cell culture systems can be employed to express and manufacture a recombinant polypeptide agent. Examples of mammalian expression systems include CHO cells, COS cells, HeLA and BHK cell lines. Processes of host cell culture for production of protein therapeutics are described in, e.g., Zhou and Kantardjieff (Eds.), Mammalian Cell Cultures for Biologics Manufacturing (Advances in Biochemical Engineering/Biotechnology), Springer (2014). Purification of proteins is described in Franks, Protein Biotechnology: Isolation, Characterization, and Stabilization, Humana Press (2013); and in Cutler, Protein Purification Protocols (Methods in Molecular Biology), Humana Press (2010). Formulation of protein therapeutics is described in Meyer (Ed.), Therapeutic Protein Drug Products: Practical Approaches to formulation in the Laboratory, Manufacturing, and the Clinic, Woodhead Publishing Series (2012). Alternatively, the polypeptide may be a chemically synthesized polypeptide.


In some instances, the PMP includes an antibody or antigen binding fragment thereof. For example, an agent described herein may be an antibody that blocks or potentiates activity and/or function of a component of the pathogen. The antibody may act as an antagonist or agonist of a polypeptide (e.g., enzyme or cell receptor) in the pathogen. The making and use of antibodies against a target antigen in a pathogen is known in the art. See, for example, Zhiqiang An (Ed.), Therapeutic Monoclonal Antibodies: From Bench to Clinic, 1st Edition, Wiley, 2009 and also Greenfield (Ed.), Antibodies: A Laboratory Manual, 2nd Edition, Cold Spring Harbor Laboratory Press, 2013, for methods of making recombinant antibodies, including antibody engineering, use of degenerate oligonucleotides, 5′-RACE, phage display, and mutagenesis; antibody testing and characterization; antibody pharmacokinetics and pharmacodynamics; antibody purification and storage; and screening and labeling techniques.


The exogenous polypeptide may be released from the PMP in the target cell. In some aspects, the exogenous polypeptide exerts activity in the cytoplasm of the target cell or in the nucleus of the target cell. The exogenous polypeptide may be translocated to the nucleus of the target cell.


In some aspects, uptake by a cell of the exogenous polypeptide encapsulated by the PMP is increased relative to uptake of the exogenous polypeptide not encapsulated by a PMP.


In some aspects, the effectiveness of the exogenous polypeptide encapsulated by the PMP is increased relative to the effectiveness of the exogenous polypeptide not encapsulated by a PMP.


A. Therapeutic Agents

The exogenous polypeptide may be a therapeutic agent, e.g., an agent used for the prevention or treatment of a condition or a disease. In some aspects, the disease is a cancer, an autoimmine condition, or a metabolic disorder.


In some examples, the therapeutic agent is a peptide (e.g., a naturally occurring peptide, a recombinant peptide, or a synthetic peptide) or a protein (e.g., a naturally occurring protein, a recombinant protein, or a synthetic protein). In some examples, the protein is a fusion protein.


In some examples, the polypeptide is endogenous to the organism (e.g., mammal) to which the PMP is delivered. In other examples, the polypeptide is not endogenous to the organism.


In some examples, the therapeutic agent is an antibody (e.g., a monoclonal antibody, e.g., a monospecific, bispecific, or multispecific monoclonal antibody) or an antigen-binding fragment thereof (e.g., an scFv, (scFv)2, Fab, Fab′, and F(ab′)2, F(ab1)2, Fv, dAb, and Fd fragment, or a diabody), a nanobody, a conjugated antibody, or an antibody-related polypeptide.


In some examples, the therapeutic agent is an antimicrobial, antibacterial, antifungal, antinematicidal, antiparasitic, or antiviral polypeptide.


In some examples, the therapeutic agent is an allergenic, an allergen, or an antigen.


In some examples, the therapeutic agent is a vaccine (e.g., a conjugate vaccine, an inactivated vaccine, or a live attenuated vaccine),


In some examples, the therapeutic agent is an enzyme, e.g., a metabolic recombinase, a helicase, an integrase, a RNAse, a DNAse, an ubiquitination protein. In some examples, the enzyme is a recombinant enzyme.


In some examples, the therapeutic agent is a gene editing protein, e.g., a component of a CRISPR-Cas system, TALEN, or zinc finger.


In some examples, the therapeutic agent is any one of a cytokine, a hormone, a signaling ligand, a transcription factor, a receptor, a receptor antagonist, a receptor agonist, a blocking or neutralizing polypeptide, a riboprotein, or a chaperone.


In some examples, the therapeutic agent is a pore-forming protein, a cell-penetrating peptide, a cell-penetrating peptide inhibitor, or a proteolysis targeting chimera (PROTAC).


In some examples, the therapeutic agent is any one of an aptamer, a blood derivative, a cell therapy, or an immunotherapy (e.g., a cellular immunotherapy.


In some aspects, the therapeutic agent is a protein or peptide therapeutic with enzymatic activity, regulatory activity, or targeting activity, e.g., a protein or peptide with activity that affects one or more of endocrine and growth regulation, metabolic enzyme deficiencies, hematopoiesis, hemostasis and thrombosis; gastrointestinal-tract disorders; pulmonary disorders; immunodeficiencies and/or immunoregulation; fertility; aging (e.g., anti-aging activity); autophagy regulation; epigenetic regulation; oncology; or infectious diseases (e.g., anti-microbial peptides, anti-fungals, or anti-virals).


In some aspects, the therapeutic agent is a protein vaccine, e.g., a vaccine for use in protecting against a deleterious foreign agent, treating an autoimmune disease, or treating cancer (e.g., a neoantigen).


In some examples, the polypeptide is globular, fibrous, or disordered.


In some examples, the polypeptide has a size of less than 1, less than 2, less than 5, less than 10, less than 15, less than 20, less than 30, less than 40, less than 50, less than 60, less than 70, less than 80, less than 90, or less than 100 kD, e.g., has a size of 1-50 kD (e.g., 1-10, 10-20, 20-30, 30-40, or 40-50 kD) or 50-100 kD (e.g., 50-60, 60-70, 70-80, 80-90, or 90-100 kD).


In some examples, the polypeptide has an overall charge that is positive, negative, or neutral.


The polypeptide may be modified such that the overall charge is altered, e.g., modified by adding one or more charged amino acids, for example, one or more (for example, 1-10 or 5-10) positively or negatively charged amino acids, such as an arginine tail (e.g., 5-10 arginine residues) to the N-terminus or C-terminus of the polypeptide.


In some aspects, the disease is diabetes, e.g., diabetes mellitus, e.g., Type 1 diabetes mellitus.


In some aspects, diabetes is treated by administering to a patient an effective amount of a composition comprising a plurality of PMPs, wherein one or more exogenous polypeptides are encapsulated by the PMP. In some aspects, the administration of the plurality of PMPs lowers the blood sugar of the subject.


In some aspects, the therapeutic agent is insulin.


In some examples, the therapeutic agent is an antibody shown in Table 1, a peptide shown in Table 2, an enzyme shown in Table 3, or a protein shown in Table 4.









TABLE 1







Antibodies









Broad class
Molecule Type
Drug Name





Antibody
Monoclonal Antibody
1D-09C3


Antibody
Monoclonal Antibody Conjugated
212 Pb-TCMC-Trastuzumab


Antibody
Monoclonal Antibody
2141 V-11


Antibody
Monoclonal Antibody
3BNC-117


Antibody
Monoclonal Antibody
3BNC-117LS


Antibody
Monoclonal Antibody
8H-9


Antibody
Monoclonal Antibody Conjugated
A-166


Antibody
Bispecific Monoclonal Antibody
A-337


Antibody
Monoclonal Antibody
AB-011


Antibody
Monoclonal Antibody
AB-022


Antibody
Monoclonal Antibody
AB-023


Antibody
Monoclonal Antibody
AB-154


Antibody
Monoclonal Antibody
abagovomab


Antibody
Monoclonal Antibody Conjugated
ABBV-011


Antibody
Monoclonal Antibody
ABBV-0805


Antibody
Monoclonal Antibody Conjugated
ABBV-085


Antibody
Monoclonal Antibody
ABBV-151


Antibody
Monoclonal Antibody Conjugated
ABBV-155


Antibody
Bispecific Monoclonal Antibody
ABBV-184


Antibody
Monoclonal Antibody Conjugated
ABBV-321


Antibody
Monoclonal Antibody Conjugated
ABBV-3373


Antibody
Monoclonal Antibody
ABBV-368


Antibody
Monoclonal Antibody
ABBV-927


Antibody
Monoclonal Antibody
abciximab


Antibody
Monoclonal Antibody
abelacimab [INN]


Antibody
Monoclonal Antibody Conjugated
AbGn-107


Antibody
Monoclonal Antibody
AbGn-168H


Antibody
Monoclonal Antibody
abituzumab


Antibody
Monoclonal Antibody
ACT-017


Antibody
Monoclonal Antibody Conjugated
Actimab-A


Antibody
Monoclonal Antibody Conjugated
Actimab-M


Antibody
Cellular Immunotherapy; Gene Therapy;
ACTR-087 + SEA-BCMA



Monoclonal Antibody


Antibody
Cellular Immunotherapy; Gene Therapy;
ACTR-707



Monoclonal Antibody


Antibody
Monoclonal Antibody
adalimumab


Antibody
Monoclonal Antibody
adalimumab biosimilar


Antibody
Monoclonal Antibody; Small Molecule
adavosertib + durvalumab


Antibody
Monoclonal Antibody Conjugated
ADCT-602


Antibody
Antibody
adder [Vipera bents] antivenom


Antibody
Monoclonal Antibody
ADG-106


Antibody
Monoclonal Antibody
ADG-116


Antibody
Monoclonal Antibody
adrecizumab


Antibody
Monoclonal Antibody
aducanumab


Antibody
Monoclonal Antibody
Aerucin


Antibody
Bispecific Monoclonal Antibody
AFM-13


Antibody
Monoclonal Antibody
AGEN-1181


Antibody
Monoclonal Antibody
AGEN-2373


Antibody
Monoclonal Antibody Conjugated
AGS-16C3F


Antibody
Monoclonal Antibody
AGS-1C4D4


Antibody
Monoclonal Antibody Conjugated
AGS-62P1


Antibody
Monoclonal Antibody
AHM


Antibody
Monoclonal Antibody
AIMab-7195


Antibody
Monoclonal Antibody
AK-002


Antibody
Monoclonal Antibody
AK-101


Antibody
Bispecific Monoclonal Antibody
AK-104


Antibody
Monoclonal Antibody
AK-111


Antibody
Bispecific Monoclonal Antibody
AK-112


Antibody
Monoclonal Antibody
AL-001


Antibody
Monoclonal Antibody
AL-002


Antibody
Monoclonal Antibody
AL-003


Antibody
Monoclonal Antibody
AL-101


Antibody
Monoclonal Antibody
alemtuzumab


Antibody
Monoclonal Antibody
alirocumab


Antibody
Monoclonal Antibody Conjugated
ALTP-7


Antibody
Bispecific Monoclonal Antibody
ALXN-1720


Antibody
Antibody
AMAG-423


Antibody
Monoclonal Antibody
amatuximab


Antibody
Bispecific Monoclonal Antibody
AMG-160


Antibody
Bispecific Monoclonal Antibody
AMG-211


Antibody
Monoclonal Antibody Conjugated
AMG-224


Antibody
Monoclonal Antibody
AMG-301


Antibody
Bispecific Monoclonal Antibody
AMG-330


Antibody
Monoclonal Antibody
AMG-404


Antibody
Bispecific Monoclonal Antibody
AMG-420


Antibody
Bispecific Monoclonal Antibody
AMG-424


Antibody
Bispecific Monoclonal Antibody
AMG-427


Antibody
Bispecific Monoclonal Antibody
AMG-509


Antibody
Monoclonal Antibody
AMG-529


Antibody
Bispecific Monoclonal Antibody
AMG-673


Antibody
Bispecific Monoclonal Antibody
AMG-701


Antibody
Monoclonal Antibody
AMG-714


Antibody
Bispecific Monoclonal Antibody
AMG-757


Antibody
Monoclonal Antibody
AMG-820


Antibody
Bispecific Monoclonal Antibody
AMV-564


Antibody
Monoclonal Antibody
ANB-019


Antibody
Monoclonal Antibody
andecaliximab


Antibody
Monoclonal Antibody Conjugated
anetumab ravtansine


Antibody
Monoclonal Antibody
anifrolumab


Antibody
Antibody
anthrax immune globulin (human)


Antibody
Antibody
anti-thymocyte globulin (equine)


Antibody
Antibody
anti-thymocyte globulin (rabbit)


Antibody
Antibody
antivenin latrodectus equine




immune F(ab)2


Antibody
Monoclonal Antibody
ANX-005


Antibody
Monoclonal Antibody
ANX-007


Antibody
Monoclonal Antibody
AP-101


Antibody
Monoclonal Antibody
apitegromab


Antibody
Monoclonal Antibody
APL-501


Antibody
Monoclonal Antibody
APL-502


Antibody
Bispecific Monoclonal Antibody
APVO-436


Antibody
Monoclonal Antibody
APX-003


Antibody
Monoclonal Antibody
APX-005M


Antibody
Monoclonal Antibody
ARGX-109


Antibody
Monoclonal Antibody
ARP-1536


Antibody
Monoclonal Antibody Conjugated
ARX-788


Antibody
Monoclonal Antibody
ascrinvacumab


Antibody
Monoclonal Antibody
ASLAN-004


Antibody
Monoclonal Antibody
ASP-1650


Antibody
Monoclonal Antibody
ASP-6294


Antibody
Monoclonal Antibody
ASP-8374


Antibody
Monoclonal Antibody
AT-1501


Antibody
Monoclonal Antibody
atezolizumab


Antibody
Monoclonal Antibody
ATI-355


Antibody
Monoclonal Antibody Conjugated
ATL-101


Antibody
Bispecific Monoclonal Antibody
ATOR-1015


Antibody
Monoclonal Antibody
ATOR-1017


Antibody
Monoclonal Antibody
ATRC-101


Antibody
Monoclonal Antibody
Atrosab


Antibody
Monoclonal Antibody Conjugated
Aurixim


Antibody
Monoclonal Antibody
AV-1


Antibody
Monoclonal Antibody
avelumab


Antibody
Monoclonal Antibody Conjugated
AVID-100


Antibody
Monoclonal Antibody Conjugated
AVID-200


Antibody
Monoclonal Antibody
axatilimab


Antibody
Monoclonal Antibody
B-001


Antibody
Monoclonal Antibody
balstilimab


Antibody
Monoclonal Antibody
basiliximab


Antibody
Monoclonal Antibody
BAT-4406


Antibody
Monoclonal Antibody
batoclimab


Antibody
Monoclonal Antibody
bavituximab


Antibody
Monoclonal Antibody
BAY-1093884


Antibody
Monoclonal Antibody
BAY-1834942


Antibody
Monoclonal Antibody
BAY-1905254


Antibody
Monoclonal Antibody Conjugated
BAY-2287411


Antibody
Monoclonal Antibody Conjugated
BAY-2315497


Antibody
Monoclonal Antibody Conjugated
BB-1701


Antibody
Monoclonal Antibody Conjugated
BC-8SA


Antibody
Monoclonal Antibody Conjugated
BC-8Y90


Antibody
Monoclonal Antibody
BCBA-445


Antibody
Monoclonal Antibody
BCD-089


Antibody
Monoclonal Antibody
BCD-096


Antibody
Bispecific Monoclonal Antibody
BCD-121


Antibody
Monoclonal Antibody
BCD-132


Antibody
Monoclonal Antibody
BCD-145


Antibody
Monoclonal Antibody
BCD-217


Antibody
Monoclonal Antibody
begelomab


Antibody
Monoclonal Antibody Conjugated
belantamab mafodotin


Antibody
Monoclonal Antibody
belimumab


Antibody
Monoclonal Antibody
bemarituzumab


Antibody
Monoclonal Antibody
benralizumab


Antibody
Monoclonal Antibody
bentracimab


Antibody
Monoclonal Antibody
bermekimab


Antibody
Monoclonal Antibody
bertilimumab


Antibody
Monoclonal Antibody Conjugated
Betalutin


Antibody
Monoclonal Antibody
bevacizumab


Antibody
Monoclonal Antibody
bevacizumab biosimilar


Antibody
Monoclonal Antibody
bezlotoxumab


Antibody
Monoclonal Antibody
BG-00011


Antibody
Monoclonal Antibody
BGB-149


Antibody
Monoclonal Antibody
BHQ-880


Antibody
Monoclonal Antibody
BI-1206


Antibody
Monoclonal Antibody
BI-201


Antibody
Monoclonal Antibody
BI-505


Antibody
Monoclonal Antibody
BI-655064


Antibody
Monoclonal Antibody
BI-655088


Antibody
Monoclonal Antibody
BI-754091


Antibody
Monoclonal Antibody
BI-754111


Antibody
Monoclonal Antibody
BI-836826


Antibody
Monoclonal Antibody
BI-836858


Antibody
Bispecific Monoclonal Antibody
BI-836880


Antibody
Monoclonal Antibody Conjugated
BIIB-015


Antibody
Monoclonal Antibody
BIIB-059


Antibody
Monoclonal Antibody
BIIB-076


Antibody
Monoclonal Antibody
bimagrumab


Antibody
Monoclonal Antibody
bimekizumab


Antibody
Monoclonal Antibody
birtamimab


Antibody
Bispecific Monoclonal Antibody
Bispecific Monoclonal Antibody to




Agonize CD3 for Acute Myelocytic




Leukemia


Antibody
Bispecific Monoclonal Antibody
Bispecific Monoclonal Antibody to




Inhibit HIV 1 Env for HIV Infections


Antibody
Bispecific Monoclonal Antibody
Bispecific Monoclonal Antibody to




Target CD3 and FLT3 for Acute




Myelocytic Leukemia, Acute




Lymphocytic Leukemia and




Myelodysplastic Syndrome


Antibody
Bispecific Monoclonal Antibody
Bispecific Monoclonal Antibody to




Target GD2 and CD3 for Oncology


Antibody
Bispecific Monoclonal Antibody
Bispecific Monoclonal Antibody to




Target PD-L1 and CTLA4 for




Pancreatic Ductal Adenocarcinoma


Antibody
Monoclonal Antibody
BIVV-020


Antibody
Monoclonal Antibody
BIW-8962


Antibody
Antibody
black widow spider [Latrodectus





mactans] antivenom [equine]



Antibody
Monoclonal Antibody
bleselumab


Antibody
Bispecific Monoclonal Antibody
blinatumomab


Antibody
Monoclonal Antibody Conjugated
BMS-936561


Antibody
Monoclonal Antibody
BMS-986012


Antibody
Monoclonal Antibody Conjugated
BMS-986148


Antibody
Monoclonal Antibody
BMS-986156


Antibody
Monoclonal Antibody
BMS-986178


Antibody
Monoclonal Antibody
BMS-986179


Antibody
Monoclonal Antibody
BMS-986207


Antibody
Monoclonal Antibody
BMS-986218


Antibody
Monoclonal Antibody
BMS-986226


Antibody
Monoclonal Antibody
BMS-986253


Antibody
Monoclonal Antibody
BMS-986258


Antibody
Monoclonal Antibody
BNC-101


Antibody
Monoclonal Antibody
BOS-161721


Antibody
Antibody
botulism immune globulin


Antibody
Monoclonal Antibody
brazikumab


Antibody
Monoclonal Antibody Conjugated
brentuximab vedotin


Antibody
Monoclonal Antibody
BrevaRex MAb-AR20.5


Antibody
Monoclonal Antibody
briakinumab


Antibody
Monoclonal Antibody
brodalumab


Antibody
Monoclonal Antibody
brolucizumab


Antibody
Monoclonal Antibody
BT-063


Antibody
Antibody
BT-084


Antibody
Antibody
BT-086


Antibody
Antibody
BT-595


Antibody
Monoclonal Antibody
BTI-322


Antibody
Bispecific Monoclonal Antibody
BTRC-4017A


Antibody
Monoclonal Antibody
budigalimab


Antibody
Monoclonal Antibody
burosumab


Antibody
Monoclonal Antibody
BVX-20


Antibody
Monoclonal Antibody
cabiralizumab


Antibody
Monoclonal Antibody
CAEL-101


Antibody
Monoclonal Antibody
CAL


Antibody
Monoclonal Antibody Conjugated
camidanlumab tesirine


Antibody
Monoclonal Antibody
camrelizumab


Antibody
Monoclonal Antibody
canakinumab


Antibody
Monoclonal Antibody Conjugated
cantuzumab mertansine


Antibody
Monoclonal Antibody
caplacizumab


Antibody
Monoclonal Antibody
carotuximab


Antibody
Bispecific Monoclonal Antibody
catumaxomab


Antibody
Monoclonal Antibody
CBP-201


Antibody
Bispecific Monoclonal Antibody
CC-1


Antibody
Monoclonal Antibody
CC-90002


Antibody
Monoclonal Antibody
CC-90006


Antibody
Bispecific Monoclonal Antibody
CC-93269


Antibody
Monoclonal Antibody Conjugated
CC-99712


Antibody
Monoclonal Antibody Conjugated
CCW-702


Antibody
Monoclonal Antibody
CDX-3379


Antibody
Cellular Immunotherapy; Recombinant Protein
Cellular Immunotherapy + edodekin




alfa


Antibody
Monoclonal Antibody
cemiplimab


Antibody
Monoclonal Antibody
cendakimab


Antibody
Monoclonal Antibody
CERC-002


Antibody
Monoclonal Antibody
CERC-007


Antibody
Monoclonal Antibody
certolizumab pegol


Antibody
Monoclonal Antibody
certolizumab pegol biosimilar


Antibody
Monoclonal Antibody
cetrelimab


Antibody
Monoclonal Antibody
cetuximab


Antibody
Monoclonal Antibody
cetuximab biosimilar


Antibody
Monoclonal Antibody Conjugated
cetuximab sarotalocan


Antibody
Monoclonal Antibody
CHOH-01


Antibody
Bispecific Monoclonal Antibody
cibisatamab


Antibody
Monoclonal Antibody
cinpanemab


Antibody
Monoclonal Antibody
CIS-43


Antibody
Monoclonal Antibody
CJM-112


Antibody
Monoclonal Antibody
clazakizumab


Antibody
Monoclonal Antibody Conjugated
clivatuzumab tetraxetan


Antibody
Monoclonal Antibody
CM-101


Antibody
Monoclonal Antibody
CNTO-6785


Antibody
Monoclonal Antibody
codrituzumab


Antibody
Monoclonal Antibody Conjugated
cofetuzumab pelidotin


Antibody
Monoclonal Antibody
COM-701


Antibody
Monoclonal Antibody
concizumab


Antibody
Monoclonal Antibody
COR-001


Antibody
Antibody
coral snake [Micrurus] (polyvalent)




immunoglobulin F (ab) 2 + Fab




immunoglobulin G antivenom


Antibody
Monoclonal Antibody
cosibelimab


Antibody
Monoclonal Antibody
CPI-006


Antibody
Monoclonal Antibody
crenezumab


Antibody
Monoclonal Antibody
crizanlizumab


Antibody
Monoclonal Antibody
crovalimab


Antibody
Monoclonal Antibody
CS-1001


Antibody
Monoclonal Antibody
CS-1003


Antibody
Monoclonal Antibody
CSL-311


Antibody
Monoclonal Antibody
CSL-324


Antibody
Monoclonal Antibody
CSL-346


Antibody
Monoclonal Antibody
CSL-360


Antibody
Monoclonal Antibody
CTX-471


Antibody
Monoclonal Antibody
cusatuzumab


Antibody
Antibody
Cutaquig


Antibody
Antibody
Cuvitru


Antibody
Monoclonal Antibody
CX-072


Antibody
Monoclonal Antibody Conjugated
CX-2009


Antibody
Monoclonal Antibody Conjugated
CX-2029


Antibody
Monoclonal Antibody
Cyto-111


Antibody
Antibody
cytomegalovirus immune globulin




(human)


Antibody
Monoclonal Antibody; Small Molecule
dabrafenib mesylate +




panitumumab + trametinib dimethyl




sulfoxide


Antibody
Monoclonal Antibody
daclizumab


Antibody
Monoclonal Antibody
dalotuzumab


Antibody
Antisense Oligonucleotide; Monoclonal Antibody
danvatirsen + durvalumab


Antibody
Monoclonal Antibody
dapirolizumab pegol


Antibody
Monoclonal Antibody
daratumumab


Antibody
Monoclonal Antibody
daxdilimab


Antibody
Monoclonal Antibody
DE-098


Antibody
Antibody
death adder [Acanthophis





antarcticus] antivenom [equine]



Antibody
Monoclonal Antibody
demcizumab


Antibody
Monoclonal Antibody
denosumab


Antibody
Monoclonal Antibody
denosumab biosimilar


Antibody
Monoclonal Antibody
depatuxizumab


Antibody
Monoclonal Antibody Conjugated
depatuxizumab mafodotin


Antibody
Monoclonal Antibody
dezamizumab


Antibody
Antibody
digoxin immune Fab (ovine)


Antibody
Monoclonal Antibody
dilpacimab


Antibody
Monoclonal Antibody
dinutuximab


Antibody
Monoclonal Antibody
dinutuximab beta


Antibody
Monoclonal Antibody
diridavumab


Antibody
Monoclonal Antibody
DKN-01


Antibody
Monoclonal Antibody Conjugated
DNP-001


Antibody
Monoclonal Antibody
DNP-002


Antibody
Monoclonal Antibody
domagrozumab


Antibody
Monoclonal Antibody
donanemab


Antibody
Monoclonal Antibody
dostarlimab


Antibody
Monoclonal Antibody Conjugated
DP-303C


Antibody
Monoclonal Antibody Conjugated
DS-1062


Antibody
Monoclonal Antibody Conjugated
DS-7300


Antibody
Monoclonal Antibody
DS-8273


Antibody
Monoclonal Antibody
dupilumab


Antibody
Monoclonal Antibody
durvalumab


Antibody
Monoclonal Antibody
durvalumab + monalizumab


Antibody
Monoclonal Antibody
durvalumab + oleclumab


Antibody
Monoclonal Antibody; Small Molecule
durvalumab + selumetinib sulfate


Antibody
Monoclonal Antibody
durvalumab + tremelimumab


Antibody
Monoclonal Antibody
EBI-031


Antibody
Monoclonal Antibody
eculizumab


Antibody
Monoclonal Antibody
eculizumab biosimilar


Antibody
Monoclonal Antibody
edrecolomab


Antibody
Monoclonal Antibody
efalizumab


Antibody
Monoclonal Antibody
efgartigimod alfa


Antibody
Monoclonal Antibody
efungumab


Antibody
Monoclonal Antibody
elezanumab


Antibody
Monoclonal Antibody
elgemtumab


Antibody
Monoclonal Antibody
elipovimab


Antibody
Monoclonal Antibody
elotuzumab


Antibody
Monoclonal Antibody
emactuzumab


Antibody
Monoclonal Antibody
emapalumab


Antibody
Bispecific Monoclonal Antibody
emicizumab


Antibody
Monoclonal Antibody
enamptcumab


Antibody
Monoclonal Antibody Conjugated
enapotamab vedotin


Antibody
Monoclonal Antibody Conjugated
enfortumab vedotin


Antibody
Monoclonal Antibody
enoblituzumab


Antibody
Monoclonal Antibody
ensituximab


Antibody
Bispecific Monoclonal Antibody
epcoritamab


Antibody
Monoclonal Antibody
epratuzumab


Antibody
Monoclonal Antibody
eptinezumab


Antibody
Monoclonal Antibody
erenumab


Antibody
Bispecific Monoclonal Antibody
ertumaxomab


Antibody
Bispecific Monoclonal Antibody
ERY-974


Antibody
Monoclonal Antibody
etaracizumab


Antibody
Monoclonal Antibody
etigilimab


Antibody
Monoclonal Antibody
etokimab


Antibody
Monoclonal Antibody
etrolizumab


Antibody
Monoclonal Antibody
evinacumab


Antibody
Monoclonal Antibody
evolocumab


Antibody
Monoclonal Antibody; Synthetic Peptide
exenatide + ND-017


Antibody
Monoclonal Antibody
F-598


Antibody
Bispecific Monoclonal Antibody
faricimab


Antibody
Monoclonal Antibody
farletuzumab


Antibody
Monoclonal Antibody
fasinumab


Antibody
Monoclonal Antibody
FAZ-053


Antibody
Monoclonal Antibody
FB-704A


Antibody
Monoclonal Antibody
FB-825


Antibody
Antibody
FBF-001


Antibody
Antibody
Ferritarg


Antibody
Monoclonal Antibody Conjugated
FF-21101


Antibody
Monoclonal Antibody
ficlatuzumab


Antibody
Bispecific Monoclonal Antibody
flotetuzumab


Antibody
Monoclonal Antibody
FLYSYN


Antibody
Monoclonal Antibody
FM-101


Antibody
Monoclonal Antibody Conjugated
FOR-46


Antibody
Monoclonal Antibody
foralumab


Antibody
Monoclonal Antibody
FR-104


Antibody
Monoclonal Antibody
fremanezumab


Antibody
Monoclonal Antibody
fresolimumab


Antibody
Monoclonal Antibody
FS-102


Antibody
Bispecific Monoclonal Antibody
FS-118


Antibody
Monoclonal Antibody
fulranumab


Antibody
Monoclonal Antibody
galcanezumab


Antibody
Monoclonal Antibody
ganitumab


Antibody
Monoclonal Antibody
gantenerumab


Antibody
Monoclonal Antibody
garadacimab


Antibody
Monoclonal Antibody
garetosmab


Antibody
Monoclonal Antibody
gatipotuzumab


Antibody
Monoclonal Antibody
GC-1118A


Antibody
Monoclonal Antibody
GEM-103


Antibody
Bispecific Monoclonal Antibody
GEM-333


Antibody
Bispecific Monoclonal Antibody
GEM-3PSCA


Antibody
Monoclonal Antibody Conjugated
gemtuzumab ozogamicin


Antibody
Bispecific Monoclonal Antibody
GEN-1046


Antibody
Monoclonal Antibody
gevokizumab


Antibody
Monoclonal Antibody
gimsilumab


Antibody
Monoclonal Antibody
girentuximab


Antibody
Monoclonal Antibody Conjugated
glembatumumab vedotin


Antibody
Monoclonal Antibody
GLS-010


Antibody
Monoclonal Antibody
GMA-102


Antibody
Monoclonal Antibody
GMA-161


Antibody
Monoclonal Antibody
GMA-301


Antibody
Monoclonal Antibody
golimumab


Antibody
Monoclonal Antibody
gosuranemab


Antibody
Monoclonal Antibody
GR-1501


Antibody
Bispecific Monoclonal Antibody
gremubamab


Antibody
Bispecific Monoclonal Antibody
GS-1423


Antibody
Monoclonal Antibody
GSK-1070806


Antibody
Monoclonal Antibody
GSK-2330811


Antibody
Monoclonal Antibody
GSK-2831781


Antibody
Monoclonal Antibody
GSK-3050002


Antibody
Monoclonal Antibody
GSK-3174998


Antibody
Monoclonal Antibody
GSK-3359609


Antibody
Monoclonal Antibody
GSK-3511294


Antibody
Monoclonal Antibody
GT-103


Antibody
Monoclonal Antibody
guselkumab


Antibody
Monoclonal Antibody
GWN-323


Antibody
Monoclonal Antibody
H-11


Antibody
Monoclonal Antibody
HAB-21


Antibody
Monoclonal Antibody
HBM-4003


Antibody
Monoclonal Antibody
HDIT-101


Antibody
Antibody
hepatitis B immune globulin




(human)


Antibody
Antibody
hepatitis C virus immune globulin




(human)


Antibody
Monoclonal Antibody
HLX-06


Antibody
Monoclonal Antibody
HLX-07


Antibody
Monoclonal Antibody
HLX-10


Antibody
Monoclonal Antibody
HLX-20


Antibody
Monoclonal Antibody
HPN-217


Antibody
Monoclonal Antibody
HPN-424


Antibody
Monoclonal Antibody
HPN-536


Antibody
Monoclonal Antibody
HS-006


Antibody
Monoclonal Antibody Conjugated
HTI-1066


Antibody
Monoclonal Antibody
Hu8F4


Antibody
Antibody
human immunoglobulin




antistaphylococcal


Antibody
Monoclonal Antibody
ianalumab


Antibody
Monoclonal Antibody
ibalizumab


Antibody
Monoclonal Antibody
IBI-101


Antibody
Monoclonal Antibody
IBI-188


Antibody
Monoclonal Antibody
IBI-306


Antibody
Bispecific Monoclonal Antibody
IBI-322


Antibody
Monoclonal Antibody Conjugated
ibritumomab tiuxetan


Antibody
Monoclonal Antibody
IC-14


Antibody
Monoclonal Antibody
ICT-01


Antibody
Monoclonal Antibody
idarucizumab


Antibody
Monoclonal Antibody
ieramilimab


Antibody
Monoclonal Antibody
ifabotuzumab


Antibody
Monoclonal Antibody
IFX-1


Antibody
Monoclonal Antibody
IGEM-F


Antibody
Bispecific Monoclonal Antibody
IGM-2323


Antibody
Antibody
immune globulin (human)


Antibody
Antibody
immune globulin (human) 2


Antibody
Bispecific Monoclonal Antibody
INBRX-105


Antibody
Monoclonal Antibody
INCAGN-1876


Antibody
Monoclonal Antibody
INCAGN-1949


Antibody
Monoclonal Antibody
INCAGN-2385


Antibody
Monoclonal Antibody
inclacumab


Antibody
Monoclonal Antibody Conjugated
indatuximab ravtansine


Antibody
Monoclonal Antibody Conjugated
indusatumab vedotin


Antibody
Monoclonal Antibody
inebilizumab


Antibody
Monoclonal Antibody
infliximab


Antibody
Monoclonal Antibody
infliximab biobetter


Antibody
Monoclonal Antibody
infliximab biosimilar


Antibody
Monoclonal Antibody
INM-004


Antibody
Monoclonal Antibody
inolimomab


Antibody
Monoclonal Antibody Conjugated
inotuzumab ozogamicin


Antibody
Monoclonal Antibody Conjugated
Iodine-131-Kab201


Antibody
Monoclonal Antibody Conjugated
Iomab-B


Antibody
Monoclonal Antibody
IPH-5401


Antibody
Monoclonal Antibody
ipilimumab


Antibody
Monoclonal Antibody
ipilimumab + nivolumab


Antibody
Monoclonal Antibody
isatuximab


Antibody
Bispecific Monoclonal Antibody
ISB-1302


Antibody
Bispecific Monoclonal Antibody
ISB-1342


Antibody
Monoclonal Antibody
ISB-830


Antibody
Monoclonal Antibody
iscalimab


Antibody
Monoclonal Antibody
ISU-104


Antibody
Monoclonal Antibody
itolizumab


Antibody
Monoclonal Antibody
ixekizumab


Antibody
Monoclonal Antibody
IXTM-200


Antibody
Monoclonal Antibody
JMT-103


Antibody
Monoclonal Antibody
JNJ-0839


Antibody
Monoclonal Antibody
JNJ-3657


Antibody
Monoclonal Antibody
JNJ-4500


Antibody
Bispecific Monoclonal Antibody
JNJ-6372


Antibody
Bispecific Monoclonal Antibody
JNJ-67571244


Antibody
Bispecific Monoclonal Antibody
JNJ-7564


Antibody
Bispecific Monoclonal Antibody
JNJ-7957


Antibody
Bispecific Monoclonal Antibody
JNJ-9178


Antibody
Monoclonal Antibody
JS-004


Antibody
Monoclonal Antibody
JTX-4014


Antibody
Monoclonal Antibody
JY-025


Antibody
Monoclonal Antibody
K-170


Antibody
Monoclonal Antibody
KHK-2823


Antibody
Monoclonal Antibody
KHK-4083


Antibody
Monoclonal Antibody
KHK-6640


Antibody
Monoclonal Antibody Conjugated
Kid EDV


Antibody
Monoclonal Antibody
KLA-167


Antibody
Bispecific Monoclonal Antibody
KN-026


Antibody
Bispecific Monoclonal Antibody
KN-046


Antibody
Monoclonal Antibody
KSI-301


Antibody
Monoclonal Antibody
KY-1005


Antibody
Monoclonal Antibody Conjugated
labetuzumab govitecan


Antibody
Monoclonal Antibody
lacnotuzumab


Antibody
Monoclonal Antibody
lacutamab


Antibody
Monoclonal Antibody Conjugated
ladiratuzumab vedotin


Antibody
Monoclonal Antibody
lanadelumab


Antibody
Monoclonal Antibody
LBL-007


Antibody
Monoclonal Antibody Conjugated
LDOS-47


Antibody
Monoclonal Antibody
lebrikizumab


Antibody
Monoclonal Antibody
lecanemab


Antibody
Monoclonal Antibody
Lemtrada


Antibody
Monoclonal Antibody
lenvervimab


Antibody
Monoclonal Antibody
lenzilumab


Antibody
Monoclonal Antibody
leronlimab


Antibody
Monoclonal Antibody
letolizumab


Antibody
Monoclonal Antibody
ligelizumab


Antibody
Monoclonal Antibody
lintuzumab


Antibody
Monoclonal Antibody; Recombinant Peptide
liraglutide + NN-8828


Antibody
Monoclonal Antibody
lirilumab


Antibody
Monoclonal Antibody
LKA-651


Antibody
Monoclonal Antibody
LLG-783


Antibody
Monoclonal Antibody
lodapolimab


Antibody
Monoclonal Antibody Conjugated
loncastuximab tesirine


Antibody
Monoclonal Antibody Conjugated
lorvotuzumab mertansine


Antibody
Monoclonal Antibody
LuAF-82422


Antibody
Monoclonal Antibody
LuAF-87908


Antibody
Monoclonal Antibody
lulizumab pegol


Antibody
Monoclonal Antibody
lumiliximab


Antibody
Monoclonal Antibody
LVGN-6051


Antibody
Monoclonal Antibody
LY-3022855


Antibody
Monoclonal Antibody
LY-3041658


Antibody
Monoclonal Antibody
LY-3127804


Antibody
Bispecific Monoclonal Antibody
LY-3434172


Antibody
Antibody
LY-3435151


Antibody
Antibody
LY-3454738


Antibody
Monoclonal Antibody
LZM-009


Antibody
Bispecific Monoclonal Antibody
M-1095


Antibody
Antibody
M-254


Antibody
Monoclonal Antibody
M-6495


Antibody
Bispecific Monoclonal Antibody
M-802


Antibody
Monoclonal Antibody
mAb-114


Antibody
Monoclonal Antibody
magrolimab


Antibody
Monoclonal Antibody
margetuximab


Antibody
Monoclonal Antibody
marstacimab


Antibody
Monoclonal Antibody
MAU-868


Antibody
Monoclonal Antibody
mavrilimumab


Antibody
Bispecific Monoclonal Antibody
MCLA-117


Antibody
Bispecific Monoclonal Antibody
MCLA-145


Antibody
Bispecific Monoclonal Antibody
MCLA-158


Antibody
Monoclonal Antibody
MDX-1097


Antibody
Monoclonal Antibody
MEDI-0618


Antibody
Monoclonal Antibody
MEDI-1341


Antibody
Monoclonal Antibody
MEDI-1814


Antibody
Monoclonal Antibody
MEDI-3506


Antibody
Monoclonal Antibody
MEDI-3617 + tremelimumab


Antibody
Monoclonal Antibody
MEDI-5117


Antibody
Monoclonal Antibody Conjugated
MEDI-547


Antibody
Monoclonal Antibody
MEDI-570


Antibody
Bispecific Monoclonal Antibody
MEDI-5752


Antibody
Bispecific Monoclonal Antibody
MEDI-7352


Antibody
Monoclonal Antibody
melrilimab


Antibody
Monoclonal Antibody
MEN-1112


Antibody
Monoclonal Antibody
mepolizumab


Antibody
Monoclonal Antibody
metelimumab


Antibody
Monoclonal Antibody
MG-1113A


Antibody
Monoclonal Antibody
MGA-012


Antibody
Monoclonal Antibody
MGB-453


Antibody
Monoclonal Antibody Conjugated
MGC-018


Antibody
Bispecific Monoclonal Antibody
MGD-013


Antibody
Monoclonal Antibody
MIL-62


Antibody
Monoclonal Antibody
milatuzumab


Antibody
Monoclonal Antibody
mirikizumab


Antibody
Monoclonal Antibody Conjugated
mirvetuximab soravtansine


Antibody
Monoclonal Antibody
mitazalimab


Antibody
Monoclonal Antibody
MK-1308


Antibody
Monoclonal Antibody
MK-1654


Antibody
Monoclonal Antibody
MK-3655


Antibody
Monoclonal Antibody
MK-4166


Antibody
Monoclonal Antibody
MK-4280


Antibody
Monoclonal Antibody
MK-5890


Antibody
Monoclonal Antibody
mogamulizumab


Antibody
Monoclonal Antibody
monalizumab


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody Conjugate to




Target CD20 for Leukemia and




Burkitt Lymphoma


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody Conjugate to




Target CD45 for Oncology


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody Conjugate to




Target CEA for Metastatic Liver,




Colorectal Cancer and Solid Tumor


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody Conjugate to




Target CEACAM5 for Non Small




Cell Lung Cancer and Metastatic




Colorectal Cancer


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody Conjugated to




Target EPCAM for Colorectal




Cancer


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody Conjugated to




Target PSMA for Prostate Cancer


Antibody
Monoclonal Antibody
Monoclonal Antibody for




Coronavirus Disease 2019 (COVID-




19)


Antibody
Monoclonal Antibody
Monoclonal Antibody for Dengue


Antibody
Monoclonal Antibody
Monoclonal Antibody to Antagonize




IL-2R Beta for Celiac Disease,




Oncology and Tropical Spastic




Paraparesis


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit




ANXA3 for Hepatocellular




Carcinoma


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit CD4




for HIV-1


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit GD2




for Oncology


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit




Glycoprotein 120 for HIV-1




infections


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit IL-




17A and IL-17F for Unspecified




Indication


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit PD-




L1 for Solid Tumor


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit PD1




for Solid Tumors


Antibody
Monoclonal Antibody
Monoclonal Antibody to Inhibit TNF-




Alpha for Dupuytren's contracture


Antibody
Monoclonal Antibody Conjugated
Monoclonal Antibody to Target




CD66b for Blood Cancer and




Metabolic Disorders


Antibody
Monoclonal Antibody
Monoclonal Antibody to Target




GP41 for HIV Infections


Antibody
Monoclonal Antibody
MOR-106


Antibody
Monoclonal Antibody
MOR-202


Antibody
Monoclonal Antibody Conjugated
MORAb-202


Antibody
Bispecific Monoclonal Antibody
mosunetuzumab


Antibody
Monoclonal Antibody Conjugated
moxetumomab pasudotox


Antibody
Monoclonal Antibody
MSB-2311


Antibody
Monoclonal Antibody
MSC-1


Antibody
Monoclonal Antibody
MT-2990


Antibody
Monoclonal Antibody
MT-3921


Antibody
Monoclonal Antibody
murlentamab


Antibody
Monoclonal Antibody
muromonab-CD3


Antibody
Monoclonal Antibody
MVT-5873


Antibody
Monoclonal Antibody
namilumab


Antibody
Monoclonal Antibody Conjugated
naratuximab emtansine


Antibody
Monoclonal Antibody
narsoplimab


Antibody
Monoclonal Antibody
natalizumab


Antibody
Monoclonal Antibody
natalizumab biosimilar


Antibody
Bispecific Monoclonal Antibody
navicixizumab


Antibody
Monoclonal Antibody
naxitamab


Antibody
Monoclonal Antibody
NC-318


Antibody
Monoclonal Antibody
nebacumab


Antibody
Monoclonal Antibody
necitumumab


Antibody
Monoclonal Antibody
nemolizumab


Antibody
Monoclonal Antibody
netakimab


Antibody
Monoclonal Antibody
NGM-120


Antibody
Monoclonal Antibody
NI-006


Antibody
Monoclonal Antibody
NI-0101


Antibody
Monoclonal Antibody
nidanilimab


Antibody
Monoclonal Antibody
nimacimab


Antibody
Monoclonal Antibody
nimotuzumab


Antibody
Monoclonal Antibody
nimotuzumab biosimilar


Antibody
Monoclonal Antibody
nipocalimab


Antibody
Monoclonal Antibody
nirsevimab


Antibody
Monoclonal Antibody
NIS-793


Antibody
Monoclonal Antibody
nivolumab


Antibody
Monoclonal Antibody Conjugated
NJH-395


Antibody
Bispecific Monoclonal Antibody
NNC-03653769A


Antibody
Antibody
NP-024


Antibody
Antibody
NP-025


Antibody
Monoclonal Antibody
NP-137


Antibody
Monoclonal Antibody
NPC-21


Antibody
Bispecific Monoclonal Antibody
NXT-007


Antibody
Monoclonal Antibody
NZV-930


Antibody
Monoclonal Antibody
obexelimab


Antibody
Monoclonal Antibody
OBI-888


Antibody
Monoclonal Antibody Conjugated
OBI-999


Antibody
Monoclonal Antibody
obiltoxaximab


Antibody
Monoclonal Antibody
obinutuzumab


Antibody
Monoclonal Antibody Conjugated
OBT-076


Antibody
Monoclonal Antibody
ocaratuzumab


Antibody
Monoclonal Antibody
ocrelizumab


Antibody
Bispecific Monoclonal Antibody
odronextamab


Antibody
Monoclonal Antibody
ofatumumab


Antibody
Monoclonal Antibody
olaratumab


Antibody
Monoclonal Antibody
oleclumab


Antibody
Monoclonal Antibody
olendalizumab


Antibody
Monoclonal Antibody
olinvacimab


Antibody
Monoclonal Antibody
olokizumab


Antibody
Monoclonal Antibody
omalizumab


Antibody
Monoclonal Antibody
omalizumab biosimilar


Antibody
Monoclonal Antibody Conjugated
omburtamab


Antibody
Monoclonal Antibody
omodenbamab


Antibody
Monoclonal Antibody
ONC-392


Antibody
Monoclonal Antibody
ontamalimab


Antibody
Monoclonal Antibody
ontuxizumab


Antibody
Monoclonal Antibody
opicinumab


Antibody
Monoclonal Antibody
oregovomab


Antibody
Monoclonal Antibody
orilanolimab


Antibody
Monoclonal Antibody
orticumab


Antibody
Monoclonal Antibody
OS-2966


Antibody
Monoclonal Antibody
OSE-127


Antibody
Monoclonal Antibody
osocimab


Antibody
Monoclonal Antibody
otelixizumab


Antibody
Monoclonal Antibody
otilimab


Antibody
Monoclonal Antibody
otlertuzumab


Antibody
Monoclonal Antibody Conjugated
OTSA-101


Antibody
Monoclonal Antibody Conjugated
OXS-1750


Antibody
Monoclonal Antibody Conjugated
OXS-2050


Antibody
Monoclonal Antibody
ozoralizumab


Antibody
Monoclonal Antibody
P-2G12


Antibody
Monoclonal Antibody
pagibaximab


Antibody
Monoclonal Antibody
palivizumab


Antibody
Monoclonal Antibody
pamrevlumab


Antibody
Monoclonal Antibody
panitumumab


Antibody
Monoclonal Antibody
panobacumab


Antibody
Bispecific Monoclonal Antibody
pasotuxizumab


Antibody
Monoclonal Antibody
PAT-SC1


Antibody
Monoclonal Antibody
patritumab


Antibody
Monoclonal Antibody
PC-mAb


Antibody
Monoclonal Antibody
PD-0360324


Antibody
Monoclonal Antibody
pembrolizumab


Antibody
Monoclonal Antibody
pepinemab


Antibody
Monoclonal Antibody
pertuzumab


Antibody
Monoclonal Antibody
pertuzumab + trastuzumab


Antibody
Monoclonal Antibody
PF-04518600


Antibody
Monoclonal Antibody
PF-06480605


Antibody
Antibody
PF-06730512


Antibody
Monoclonal Antibody
PF-06823859


Antibody
Bispecific Monoclonal Antibody
PF-06863135


Antibody
Monoclonal Antibody
pidilizumab


Antibody
Antibody
pit viper snake [Crotalidae]




(polyvalent) immunoglobulin F(ab′)2




antivenom [equine]


Antibody
Bispecific Monoclonal Antibody
plamotamab


Antibody
Monoclonal Antibody
PNT-001


Antibody
Monoclonal Antibody Conjugated
polatuzumab vedotin


Antibody
Antibody
PolyCAb


Antibody
Monoclonal Antibody
pozelimab


Antibody
Monoclonal Antibody
prasinezumab


Antibody
Monoclonal Antibody
pritumumab


Antibody
Monoclonal Antibody
PRL3-ZUMAB


Antibody
Monoclonal Antibody
prolgolimab


Antibody
Monoclonal Antibody
PRV-300


Antibody
Bispecific Monoclonal Antibody
PRV-3279


Antibody
Monoclonal Antibody
PRX-004


Antibody
Bispecific Monoclonal Antibody
PSB-205


Antibody
Monoclonal Antibody
PTX-35


Antibody
Monoclonal Antibody
PTZ-329


Antibody
Monoclonal Antibody
PTZ-522


Antibody
Monoclonal Antibody
quetmolimab


Antibody
Monoclonal Antibody
QX-002N


Antibody
Monoclonal Antibody
R-1549


Antibody
Monoclonal Antibody
rabies immune globulin (human)


Antibody
Monoclonal Antibody
racotumomab


Antibody
Monoclonal Antibody Conjugated
Radspherin


Antibody
Monoclonal Antibody
ramucirumab


Antibody
Monoclonal Antibody
ranibizumab


Antibody
Monoclonal Antibody
ranibizumab biosimilar


Antibody
Monoclonal Antibody
ranibizumab SR


Antibody
Monoclonal Antibody
ravagalimab


Antibody
Monoclonal Antibody
ravulizumab


Antibody
Monoclonal Antibody
ravulizumab next generation


Antibody
Monoclonal Antibody
raxibacumab


Antibody
Monoclonal Antibody Conjugated
RC-48


Antibody
Monoclonal Antibody


Antibody
Monoclonal Antibody
REGN-3048


Antibody
Monoclonal Antibody
REGN-3051


Antibody
Monoclonal Antibody
REGN-3500


Antibody
Bispecific Monoclonal Antibody
REGN-4018


Antibody
Monoclonal Antibody
REGN-4461


Antibody
Antibody
REGN-5069


Antibody
Bispecific Monoclonal Antibody
REGN-5458


Antibody
Bispecific Monoclonal Antibody
REGN-5459


Antibody
Bispecific Monoclonal Antibody
REGN-5678


Antibody
Monoclonal Antibody
REGN-5713


Antibody
Monoclonal Antibody
REGN-5714


Antibody
Monoclonal Antibody
REGN-5715


Antibody
Monoclonal Antibody
relatlimab


Antibody
Monoclonal Antibody
reslizumab


Antibody
Antibody
respiratory syncytial virus immune




globulin (human)


Antibody
Monoclonal Antibody
RG-6125


Antibody
Bispecific Monoclonal Antibody
RG-6139


Antibody
Monoclonal Antibody
RG-6149


Antibody
Bispecific Monoclonal Antibody; Monoclonal
RG-6160



Antibody


Antibody
Monoclonal Antibody
RG-6292


Antibody
Antibody
RG-70240


Antibody
Monoclonal Antibody Conjugated
RG-7861


Antibody
Bispecific Monoclonal Antibody
RG-7992


Antibody
Antibody
rho(D) immune globulin (human)


Antibody
Monoclonal Antibody
rilotumumab


Antibody
Monoclonal Antibody
risankizumab


Antibody
Monoclonal Antibody
rituximab


Antibody
Monoclonal Antibody
rituximab biosimilar


Antibody
Bispecific Monoclonal Antibody
RO-7082859


Antibody
Bispecific Monoclonal Antibody
RO-7121661


Antibody
Monoclonal Antibody
roledumab


Antibody
Bispecific Monoclonal Antibody
romilkimab


Antibody
Monoclonal Antibody
romosozumab


Antibody
Monoclonal Antibody Conjugated
rovalpituzumab tesirine


Antibody
Monoclonal Antibody
rozanolixizumab


Antibody
Monoclonal Antibody Conjugated
rozibafusp alfa


Antibody
Monoclonal Antibody
RZ-358


Antibody
Antibody
SAB-301


Antibody
Monoclonal Antibody Conjugated
sacituzumab govitecan


Antibody
Monoclonal Antibody
SAIT-301


Antibody
Monoclonal Antibody Conjugated
SAR-408701


Antibody
Monoclonal Antibody
SAR-439459


Antibody
Bispecific Monoclonal Antibody
SAR-440234


Antibody
Monoclonal Antibody
SAR-441236


Antibody
Monoclonal Antibody
sarilumab


Antibody
Monoclonal Antibody
sasanlimab


Antibody
Monoclonal Antibody
satralizumab


Antibody
Monoclonal Antibody Conjugated
SC-003


Antibody
Antibody
scorpion (polyvalent)




immunoglobulin F(ab′)2 antivenom


Antibody
Antibody
scorpion [centruroides] (polyvalent)




immunoglobulin F(ab′) 2 antivenom




[equine]


Antibody
Monoclonal Antibody
SCT-200


Antibody
Monoclonal Antibody
SCT-630


Antibody
Monoclonal Antibody
SEA-BCMA


Antibody
Monoclonal Antibody
SEA-CD40


Antibody
Monoclonal Antibody
secukinumab


Antibody
Monoclonal Antibody
selicrelumab


Antibody
Monoclonal Antibody
semorinemab


Antibody
Monoclonal Antibody
setrusumab


Antibody
Monoclonal Antibody Conjugated
SGNCD-228A


Antibody
Monoclonal Antibody Conjugated
SGNCD-47M


Antibody
Antibody
SHR-1209


Antibody
Monoclonal Antibody
SHR-1316


Antibody
Monoclonal Antibody
siltuximab


Antibody
Monoclonal Antibody
Simponi Aria


Antibody
Monoclonal Antibody
sintilimab


Antibody
Monoclonal Antibody
siplizumab


Antibody
Monoclonal Antibody
sirukumab


Antibody
Monoclonal Antibody Conjugated
SKB-264


Antibody
Monoclonal Antibody
solanezumab


Antibody
Monoclonal Antibody
spartalizumab


Antibody
Monoclonal Antibody
spesolimab


Antibody
Monoclonal Antibody
SRF-617


Antibody
Monoclonal Antibody
SSS-07


Antibody
Monoclonal Antibody
STIA-1014


Antibody
Monoclonal Antibody Conjugated
STRO-001


Antibody
Monoclonal Antibody Conjugated
STRO-002


Antibody
Monoclonal Antibody
Sulituzumab


Antibody
Monoclonal Antibody
sutimlimab


Antibody
Monoclonal Antibody
suvratoxumab


Antibody
Monoclonal Antibody Conjugated
SYD-1875


Antibody
Monoclonal Antibody
Sym-015


Antibody
Monoclonal Antibody
Sym-021


Antibody
Monoclonal Antibody
Sym-022


Antibody
Monoclonal Antibody
Sym-023


Antibody
Monoclonal Antibody
SYN-004


Antibody
Monoclonal Antibody
SYN-023


Antibody
Monoclonal Antibody
TAB-014


Antibody
Monoclonal Antibody
TAB-08


Antibody
Monoclonal Antibody
tafasitamab


Antibody
Antibody
taipan [Oxyuranus scutellatus]




antivenom [equine]


Antibody
Monoclonal Antibody
TAK-079


Antibody
Monoclonal Antibody Conjugated
TAK-164


Antibody
Monoclonal Antibody
talacotuzumab


Antibody
Monoclonal Antibody
tanezumab


Antibody
Monoclonal Antibody Conjugated
telisotuzumab vedotin


Antibody
Monoclonal Antibody
temelimab


Antibody
Monoclonal Antibody
teplizumab


Antibody
Monoclonal Antibody
teprotumumab


Antibody
Monoclonal Antibody
tesidolumab


Antibody
Antibody
tetanus immune globulin


Antibody
Monoclonal Antibody
tezepelumab


Antibody
Monoclonal Antibody Conjugated
TF-2


Antibody
Bispecific Monoclonal Antibody
TG-1801


Antibody
Monoclonal Antibody
THR-317


Antibody
Bispecific Monoclonal Antibody
tibulizumab


Antibody
Monoclonal Antibody
tilavonemab


Antibody
Monoclonal Antibody
tildrakizumab


Antibody
Monoclonal Antibody
timigutuzumab


Antibody
Monoclonal Antibody
timolumab


Antibody
Monoclonal Antibody
tiragolumab


Antibody
Monoclonal Antibody
tislelizumab


Antibody
Monoclonal Antibody Conjugated
tisotumab vedotin


Antibody
Monoclonal Antibody
TJC-4


Antibody
Monoclonal Antibody
TJD-5


Antibody
Monoclonal Antibody
TJM-2


Antibody
Monoclonal Antibody
TM-123


Antibody
Bispecific Monoclonal Antibody
TMB-365


Antibody
Bispecific Monoclonal Antibody
TNB-383B


Antibody
Monoclonal Antibody
tocilizumab


Antibody
Monoclonal Antibody
tocilizumab biosimilar


Antibody
Monoclonal Antibody
tomaralimab


Antibody
Monoclonal Antibody
tomuzotuximab


Antibody
Monoclonal Antibody
toripalimab


Antibody
Monoclonal Antibody
tosatoxumab


Antibody
Monoclonal Antibody Conjugated
tositumomab + Iodine I 131




tositumomab


Antibody
Monoclonal Antibody
tralokinumab


Antibody
Monoclonal Antibody
trastuzumab


Antibody
Monoclonal Antibody
trastuzumab biosimilar


Antibody
Monoclonal Antibody Conjugated
trastuzumab deruxtecan


Antibody
Monoclonal Antibody Conjugated
trastuzumab duocarmazine


Antibody
Monoclonal Antibody Conjugated
trastuzumab emtansine


Antibody
Monoclonal Antibody
tremelimumab


Antibody
Monoclonal Antibody
trevogrumab


Antibody
Monoclonal Antibody
TRK-950


Antibody
Monoclonal Antibody Conjugated
TRPH-222


Antibody
Monoclonal Antibody
TTX-030


Antibody
Monoclonal Antibody Conjugated
TX-250


Antibody
Monoclonal Antibody Conjugated
U-31402


Antibody
Monoclonal Antibody
U-31784


Antibody
Monoclonal Antibody
UB-221


Antibody
Monoclonal Antibody
UB-421


Antibody
Monoclonal Antibody
UB-621


Antibody
Monoclonal Antibody
ublituximab


Antibody
Monoclonal Antibody; Small Molecule
ublituximab + umbralisib tosylate


Antibody
Monoclonal Antibody
UBP-1213


Antibody
Monoclonal Antibody
UC-961


Antibody
Monoclonal Antibody
UCB-0107


Antibody
Monoclonal Antibody
UCB-6114


Antibody
Monoclonal Antibody
UCB-7858


Antibody
Monoclonal Antibody
ulocuplumab


Antibody
Monoclonal Antibody
urelumab


Antibody
Monoclonal Antibody
ustekinumab


Antibody
Monoclonal Antibody
ustekinumab biosimilar


Antibody
Monoclonal Antibody
utomilumab


Antibody
Monoclonal Antibody Conjugated
vadastuximab talirine


Antibody
Bispecific Monoclonal Antibody
vanucizumab


Antibody
Antibody


Antibody
Monoclonal Antibody
varisacumab


Antibody
Monoclonal Antibody
varlilumab


Antibody
Monoclonal Antibody
vedolizumab


Antibody
Monoclonal Antibody
veltuzumab


Antibody
Monoclonal Antibody
VIR-2482


Antibody
Monoclonal Antibody
VIS-410


Antibody
Monoclonal Antibody
VIS-649


Antibody
Monoclonal Antibody
vixarelimab


Antibody
Monoclonal Antibody Conjugated
VLS-101


Antibody
Monoclonal Antibody
vobarilizumab


Antibody
Monoclonal Antibody
vofatamab


Antibody
Monoclonal Antibody
volagidemab


Antibody
Monoclonal Antibody
vopratelimab


Antibody
Monoclonal Antibody
VRC-01


Antibody
Monoclonal Antibody
VRC-07523LS


Antibody
Monoclonal Antibody
vunakizumab


Antibody
Monoclonal Antibody Conjugated
W-0101


Antibody
Monoclonal Antibody
WBP-297


Antibody
Antibody


Antibody
Antibody
Xembify


Antibody
Monoclonal Antibody
xentuzumab


Antibody
Monoclonal Antibody
Xgeva


Antibody
Bispecific Monoclonal Antibody
XmAb-14045


Antibody
Bispecific Monoclonal Antibody
XmAb-22841


Antibody
Bispecific Monoclonal Antibody
XmAb-23104


Antibody
Monoclonal Antibody Conjugated
XMT-1536


Antibody
Monoclonal Antibody
XOMA-213


Antibody
Monoclonal Antibody
YS-110


Antibody
Monoclonal Antibody
YYB-101


Antibody
Monoclonal Antibody
zagotenemab


Antibody
Monoclonal Antibody
zalifrelimab


Antibody
Monoclonal Antibody
zanolimumab


Antibody
Bispecific Monoclonal Antibody
zenocutuzumab


Antibody
Monoclonal Antibody
zolbetuximab


Antibody
Bispecific Monoclonal Antibody
ZW-25


Antibody/Enzyme
Antibody; Recombinant Enzyme
hyaluronidase (recombinant,




human) + immune globulin (human)


Antibody/protein
Fusion Protein; Monoclonal Antibody
durvalumab + oportuzumab




monatox
















TABLE 2







Peptides









Broad




class
Molecule Type
Drug Name





Peptide
Synthetic Peptide
A-10 + AS-21


Peptide
Synthetic Peptide
A-6


Peptide
Recombinant Peptide
AB-101


Peptide
Recombinant Peptide
AB-102


Peptide
Recombinant Peptide
AB-301


Peptide
Synthetic Peptide
abaloparatide


Peptide
Synthetic Peptide
abarelix


Peptide
Synthetic Peptide
ABT-510


Peptide
Recombinant Peptide
AC-2592


Peptide
Synthetic Peptide
ACP-003


Peptide
Synthetic Peptide
ACP-004


Peptide
Synthetic Peptide
ACP-015


Peptide
Synthetic Peptide
AcPepA


Peptide
Synthetic Peptide
ACX-107


Peptide
Synthetic Peptide
Adipotide


Peptide
Recombinant Peptide
ADV-P2


Peptide
Synthetic Peptide
AE-3763


Peptide
Synthetic Peptide
AEM-28


Peptide
Synthetic Peptide
afamelanotide acetate


Peptide
Synthetic Peptide
AFPep


Peptide
Synthetic Peptide
AGM-310


Peptide
Recombinant Peptide
AI-401


Peptide
Synthetic Peptide
AIM-102


Peptide
Recombinant Peptide
AIM-DX


Peptide
Synthetic Peptide
AKL-0707


Peptide
Recombinant Peptide
AKS-178


Peptide
Synthetic Peptide
AL-242A1


Peptide
Synthetic Peptide
AL-41A1


Peptide
Synthetic Peptide
AL-78898A


Peptide
Synthetic Peptide
albenatide


Peptide
Synthetic Peptide
albuvirtide LAR


Peptide
Synthetic Peptide
alisporivir


Peptide
Synthetic Peptide
ALM-201


Peptide
Synthetic Peptide
Alpha-1H


Peptide
Synthetic Peptide
Alpha-HGA


Peptide
Synthetic Peptide
ALRev-1


Peptide
Synthetic Peptide
ALRN-5281


Peptide
Synthetic Peptide
ALRN-6924


Peptide
Synthetic Peptide
ALY-688


Peptide
Synthetic Peptide
AMC-303


Peptide
Synthetic Peptide
Ampion


Peptide
Synthetic Peptide
AMY-106


Peptide
Synthetic Peptide
anaritide acetate


Peptide
Synthetic Peptide
angiotensin II acetate


Peptide
Recombinant Peptide
ANX-042


Peptide
Synthetic Peptide
AP-138


Peptide
Recombinant Peptide
APH-0907


Peptide
Synthetic Peptide
APL-180


Peptide
Synthetic Peptide
APL-9


Peptide
Synthetic Peptide
APP-018


Peptide
Synthetic Peptide
apraglutide


Peptide
Synthetic Peptide
ARG-301


Peptide
Synthetic Peptide
argipressin


Peptide
Synthetic Peptide
ARI-1778


Peptide
Synthetic Peptide
Artpep-2


Peptide
Synthetic Peptide
ASP-5006


Peptide
Recombinant Peptide
AT-247


Peptide
Recombinant Peptide
AT-270


Peptide
Synthetic Peptide
ATN-161


Peptide
Synthetic Peptide
atosiban


Peptide
Synthetic Peptide
atosiban acetate


Peptide
Synthetic Peptide
Atrigel-GHRP-1


Peptide
Recombinant Peptide
ATX-101


Peptide
Synthetic Peptide
AVE-3247


Peptide
Synthetic Peptide
avexitide acetate


Peptide
Synthetic Peptide
B27-PD


Peptide
Synthetic Peptide
bacitracin


Peptide
Synthetic Peptide
barusiban


Peptide
Synthetic Peptide
BBI-11008


Peptide
Synthetic Peptide
BBI-21007


Peptide
Synthetic Peptide
BDM-E


Peptide
Synthetic Peptide
BI-456906


Peptide
Synthetic Peptide
BI-473494


Peptide
Synthetic Peptide
bicalutamide + leuprolide acetate


Peptide
Recombinant Peptide
BIOD-105


Peptide
Recombinant Peptide
BIOD-107


Peptide
Recombinant Peptide
BIOD-123


Peptide
Recombinant Peptide
BIOD-125


Peptide
Recombinant Peptide
BIOD-238


Peptide
Recombinant Peptide
BIOD-250


Peptide
Recombinant Peptide
BIOD-531


Peptide
Recombinant Peptide
BIOD-Adjustable Basal


Peptide
Synthetic Peptide
bivalirudin


Peptide
Synthetic Peptide
bivalirudin trifluoroacetate


Peptide
Peptide; Synthetic Peptide
BL-3020


Peptide
Synthetic Peptide
BMS-686117


Peptide
Synthetic Peptide
BMTP-11


Peptide
Synthetic Peptide
BN-005


Peptide
Synthetic Peptide
BN-006


Peptide
Synthetic Peptide
BN-008


Peptide
Synthetic Peptide
BN-054


Peptide
Synthetic Peptide
BNZ-1


Peptide
Recombinant Peptide
BNZ-2


Peptide
Synthetic Peptide
BPI-3016


Peptide
Synthetic Peptide
BQ-123


Peptide
Synthetic Peptide
bremelanotide acetate


Peptide
Synthetic Peptide
brimapitide


Peptide
Synthetic Peptide
BRM-521


Peptide
Synthetic Peptide
BT-5528


Peptide
Synthetic Peptide
BTI-410


Peptide
Synthetic Peptide
bulevirtide


Peptide
Synthetic Peptide
buserelin acetate


Peptide
Synthetic Peptide
buserelin acetate ER


Peptide
Synthetic Peptide
Bynfezia


Peptide
Synthetic Peptide
C-16G2


Peptide
Synthetic Peptide
calcitonin


Peptide
Recombinant Peptide
calcitonin DR


Peptide
Recombinant Peptide
Capsulin IR


Peptide
Recombinant Peptide
Capsulin OAD


Peptide
Recombinant Peptide
CAR Peptide


Peptide
Synthetic Peptide
carbetocin


Peptide
Recombinant Peptide
Cardeva


Peptide
Recombinant Peptide
carperitide


Peptide
Synthetic Peptide
CBLB-612


Peptide
Synthetic Peptide
CBP-501


Peptide
Synthetic Peptide
CBX-129801


Peptide
Recombinant Peptide
celmoleukin


Peptide
Recombinant Peptide
cenderitide


Peptide
Synthetic Peptide
cetrorelix


Peptide
Synthetic Peptide
cetrorelix acetate


Peptide
Synthetic Peptide
CGX-1007


Peptide
Synthetic Peptide
CGX-1160


Peptide
Synthetic Peptide
cibinetide


Peptide
Synthetic Peptide
CIGB-300


Peptide
Recombinant Peptide
CIGB-370


Peptide
Synthetic Peptide
CIGB-500


Peptide
Synthetic Peptide
CIGB-552


Peptide
Synthetic Peptide
CIGB-814


Peptide
Synthetic Peptide
cilengitide


Peptide
Recombinant Peptide
CJC-1525


Peptide
Synthetic Peptide
CMS-024


Peptide
Synthetic Peptide
CN-105


Peptide
Recombinant Peptide
CobOral Insulin


Peptide
Synthetic Peptide
COG-1410


Peptide
Recombinant Peptide
Combulin


Peptide
Synthetic Peptide
corticorelin acetate


Peptide
Synthetic Peptide
corticotropin


Peptide
Synthetic Peptide
cosyntropin


Peptide
Synthetic Peptide
cosyntropin SR


Peptide
Synthetic Peptide
CPT-31


Peptide
Synthetic Peptide
CTCE-9908


Peptide
Recombinant Peptide
DACRA-042


Peptide
Recombinant Peptide
DACRA-089


Peptide
Synthetic Peptide
dalazatide


Peptide
Synthetic Peptide
danegaptide


Peptide
Synthetic Peptide
dasiglucagon


Peptide
Synthetic Peptide
DasKloster-0274-01


Peptide
Synthetic Peptide
davunetide


Peptide
Synthetic Peptide
DD-04107


Peptide
Synthetic Peptide
degarelix acetate


Peptide
Synthetic Peptide
delcasertib acetate


Peptide
Synthetic Peptide
delmitide acetate


Peptide
Synthetic Peptide
Dennexin


Peptide
Synthetic Peptide
Des-Asp Angiotensin 1


Peptide
Recombinant Peptide
desirudin


Peptide
Synthetic Peptide
desmopressin


Peptide
Synthetic Peptide
desmopressin acetate


Peptide
Synthetic Peptide
desmopressin acetate ODT


Peptide
Synthetic Peptide
DiaPep-277


Peptide
Synthetic Peptide
difelikefalin


Peptide
Synthetic Peptide
Dipep


Peptide
Synthetic Peptide
disitertide


Peptide
Synthetic Peptide
DMI-4983


Peptide
Synthetic Peptide
dolcanatide


Peptide
Synthetic Peptide
DP-2018


Peptide
Synthetic Peptide
DPC-016


Peptide
Synthetic Peptide
DT-109


Peptide
Synthetic Peptide
DT-110


Peptide
Synthetic Peptide
DTI-100


Peptide
Synthetic Peptide
DTI-117


Peptide
Synthetic Peptide
dusquetide


Peptide
Synthetic Peptide
Dyofins


Peptide
Synthetic Peptide
E-21R


Peptide
Synthetic Peptide
EA-230


Peptide
Recombinant Peptide
EB-613


Peptide
Synthetic Peptide
Edotreotide Labeled Yttrium 90


Peptide
Synthetic Peptide
edotreotide lutetium Lu-177


Peptide
Synthetic Peptide
edratide


Peptide
Recombinant Peptide
efpeglenatide


Peptide
Recombinant Peptide; Synthetic Peptide
efpeglenatide + HM-12470


Peptide
Synthetic Peptide
elamipretide hydrochloride


Peptide
Synthetic Peptide
elcatonin


Peptide
Synthetic Peptide
ELIGO-3233


Peptide
Synthetic Peptide
elsiglutide


Peptide
Recombinant Peptide
endostatin


Peptide
Synthetic Peptide
enfuvirtide


Peptide
Peptide; Synthetic Peptide
Engedi-1000


Peptide
Synthetic Peptide
ENKASTIM-iv


Peptide
Synthetic Peptide
EP-100


Peptide
Synthetic Peptide
EP-302


Peptide
Synthetic Peptide
EP-342


Peptide
Synthetic Peptide
EP-94


Peptide
Synthetic Peptide
EPO-018B


Peptide
Synthetic Peptide
eptifibatide


Peptide
Recombinant Peptide
ES-135


Peptide
Synthetic Peptide
etelcalcetide hydrochloride


Peptide
Synthetic Peptide
ETX-112


Peptide
Synthetic Peptide
Evitar


Peptide
Synthetic Peptide
exenatide


Peptide
Synthetic Peptide
exenatide + Synthetic Peptide 1


Peptide
Synthetic Peptide
exenatide + Synthetic Peptide 2


Peptide
Synthetic Peptide
exenatide biobetter


Peptide
Synthetic Peptide
exenatide biosimilar


Peptide
Synthetic Peptide
exenatide CR


Peptide
Synthetic Peptide
exenatide ER


Peptide
Synthetic Peptide
exenatide Once Monthly


Peptide
Synthetic Peptide
exenatide SR


Peptide
Synthetic Peptide
exendin-(9-39)


Peptide
Synthetic Peptide
EXT-307


Peptide
Synthetic Peptide
EXT-405


Peptide
Synthetic Peptide
EXT-418


Peptide
Synthetic Peptide
EXT-600


Peptide
Synthetic Peptide
EXT-607


Peptide
Synthetic Peptide
EXT-705


Peptide
Recombinant Peptide
Extendin-Fc


Peptide
Synthetic Peptide
FE-204205


Peptide
Synthetic Peptide
FF-3


Peptide
Recombinant Peptide
Fiasp


Peptide
Synthetic Peptide
FM-19


Peptide
Synthetic Peptide
FNS-007


Peptide
Synthetic Peptide
forigerimod acetate


Peptide
Synthetic Peptide
Foxy-5


Peptide
Synthetic Peptide
FP-001


Peptide
Synthetic Peptide
FP-002


Peptide
Synthetic Peptide
FP-005


Peptide
Synthetic Peptide
FPP-003


Peptide
Recombinant Peptide
FT-105


Peptide
Synthetic Peptide
FX-06


Peptide
Synthetic Peptide
G-3215


Peptide
Synthetic Peptide
ganirelix acetate


Peptide
Synthetic Peptide
glatiramer acetate


Peptide
Synthetic Peptide
glatiramer acetate ER


Peptide
Synthetic Peptide
glatiramer biosimilar


Peptide
Synthetic Peptide
glepaglutide


Peptide
Recombinant Peptide
GLP-1


Peptide
Recombinant Peptide
glucagon


Peptide
Recombinant Peptide
glucagon biosimilar


Peptide
Recombinant Peptide
Glucagon-Like Peptide-1 + insulin human


Peptide
Synthetic Peptide
glucosaminylmuramyl dipeptide


Peptide
Synthetic Peptide
GM-6


Peptide
Synthetic Peptide
GO-2032C


Peptide
Synthetic Peptide
golotimod


Peptide
Synthetic Peptide
gonadorelin


Peptide
Synthetic Peptide
gonadorelin acetate


Peptide
Synthetic Peptide
goserelin


Peptide
Synthetic Peptide
goserelin acetate


Peptide
Synthetic Peptide
goserelin ER


Peptide
Synthetic Peptide
goserelin LA


Peptide
Synthetic Peptide
goserelin SR


Peptide
Recombinant Peptide
GP-40031


Peptide
Synthetic Peptide
GSAO


Peptide
Synthetic Peptide
HaemoPlax


Peptide
Synthetic Peptide
hbEGF


Peptide
Recombinant Peptide
HDV-I


Peptide
Synthetic Peptide
hepcidin acetate


Peptide
Synthetic Peptide
histrelin


Peptide
Recombinant Peptide
HM-12460A


Peptide
Recombinant Peptide
HM-12470


Peptide
Recombinant Peptide
HM-12480


Peptide
Recombinant Peptide
HM-15136


Peptide
Synthetic Peptide
HM-15211


Peptide
Synthetic Peptide
Homspera


Peptide
Synthetic Peptide
HPI-1201


Peptide
Synthetic Peptide
HPI-201


Peptide
Synthetic Peptide
HPI-363


Peptide
Synthetic Peptide
hPTH-137


Peptide
Synthetic Peptide
HTD-4010


Peptide
Synthetic Peptide
HTL-001


Peptide
Recombinant Peptide
Humalog


Peptide
Synthetic Peptide
HXTC-901


Peptide
Synthetic Peptide
Hydrogel Exenatide


Peptide
Synthetic Peptide
icatibant acetate


Peptide
Synthetic Peptide
IIIM-1


Peptide
Synthetic Peptide
IMB-1007


Peptide
Synthetic Peptide
ImmTher


Peptide
Recombinant Peptide
insulin


Peptide
Recombinant Peptide
insulin (bovine)


Peptide
Recombinant Peptide
insulin aspart


Peptide
Recombinant Peptide
insulin aspart 1


Peptide
Recombinant Peptide
insulin aspart biosimilar


Peptide
Recombinant Peptide
insulin aspart injection


Peptide
Recombinant Peptide
insulin degludec


Peptide
Recombinant Peptide
insulin degludec LAR


Peptide
Recombinant Peptide
insulin detemir


Peptide
Recombinant Peptide
insulin glargine


Peptide
Recombinant Peptide
insulin glargine 1


Peptide
Recombinant Peptide
insulin glargine biosimilar


Peptide
Recombinant Peptide
insulin glargine biosimilar 2


Peptide
Recombinant Peptide
insulin glargine ER


Peptide
Recombinant Peptide
insulin glargine LA


Peptide
Recombinant Peptide
insulin glulisine


Peptide
Recombinant Peptide
insulin human


Peptide
Recombinant Peptide
insulin human (recombinant)


Peptide
Recombinant Peptide
insulin human 1


Peptide
Recombinant Peptide
Insulin Human 30/70 Mix Marvel


Peptide
Recombinant Peptide
Insulin Human Long Marvel


Peptide
Recombinant Peptide
Insulin Human Rapid Marvel


Peptide
Recombinant Peptide
insulin human U100


Peptide
Recombinant Peptide
insulin human zinc


Peptide
Recombinant Peptide
insulin I 131


Peptide
Recombinant Peptide
insulin isophane


Peptide
Recombinant Peptide
insulin isophane human


Peptide
Recombinant Peptide
insulin lispro


Peptide
Recombinant Peptide
insulin lispro 2


Peptide
Recombinant Peptide
insulin lispro U100


Peptide
Recombinant Peptide
insulin lispro U200


Peptide
Recombinant Peptide
insulin lispro U300


Peptide
Recombinant Peptide
insulin neutral


Peptide
Recombinant Peptide
insulin peglispro


Peptide
Recombinant Peptide
insulin tregopil


Peptide
Recombinant Peptide
Insulin-PH20


Peptide
Recombinant Peptide
Insulin-B12 Conjugate


Peptide
Recombinant Peptide
insulin, neutral


Peptide
Recombinant Peptide
Insuman


Peptide
Synthetic Peptide
IP-1510


Peptide
Synthetic Peptide
IP-151OD


Peptide
Synthetic Peptide
ipamorelin


Peptide
Synthetic Peptide
IPL-344


Peptide
Synthetic Peptide
IPP-102199


Peptide
Synthetic Peptide
IPP-204106


Peptide
Recombinant Peptide
Ir-CPI


Peptide
Synthetic Peptide
ISF-402


Peptide
Recombinant Peptide
isophane protamine recombinant human




insulin


Peptide
Synthetic Peptide
ITCA-650


Peptide
Synthetic Peptide
ITF-1697


Peptide
Recombinant Peptide
ITF-2984


Peptide
Recombinant Peptide
JDSCR-103


Peptide
Synthetic Peptide
JMR-132


Peptide
Synthetic Peptide
JNJ-26366821


Peptide
Synthetic Peptide
JNJ-38488502


Peptide
Synthetic Peptide
K-13


Peptide
Synthetic Peptide
kahalalide F


Peptide
Synthetic Peptide
KAI-1678


Peptide
Recombinant Peptide
KBP-088


Peptide
Synthetic Peptide
KES-0001


Peptide
Synthetic Peptide
Kisspeptin-10


Peptide
Synthetic Peptide
KRX-0402


Peptide
Synthetic Peptide
KSL-W


Peptide
Recombinant Peptide
KUR-112


Peptide
Recombinant Peptide
KUR-113


Peptide
Synthetic Peptide
L-1AD3


Peptide
Recombinant Peptide
LAI-287


Peptide
Recombinant Peptide
LAI-338


Peptide
Synthetic Peptide
lanreotide acetate PR


Peptide
Synthetic Peptide
lanreotide SR


Peptide
Synthetic Peptide
larazotide acetate


Peptide
Synthetic Peptide
LAT-8881


Peptide
Synthetic Peptide
LBT-1000


Peptide
Synthetic Peptide
LBT-3627


Peptide
Synthetic Peptide
LBT-5001


Peptide
Synthetic Peptide
LBT-6030


Peptide
Synthetic Peptide
LC-002


Peptide
Synthetic Peptide
leconotide


Peptide
Synthetic Peptide
leuprolide


Peptide
Synthetic Peptide
leuprolide acetate


Peptide
Small Molecule; Synthetic Peptide
leuprolide acetate + norethindrone


Peptide
Synthetic Peptide
leuprolide acetate ER


Peptide
Synthetic Peptide
leuprolide acetate PR


Peptide
Synthetic Peptide
leuprolide acetate SR


Peptide
Synthetic Peptide
leuprorelin acetate PR


Peptide
Synthetic Peptide
leuprorelin ER


Peptide
Synthetic Peptide
LH-021


Peptide
Synthetic Peptide
LH-024


Peptide
Synthetic Peptide
linaclotide


Peptide
Synthetic Peptide
linaclotide DR2


Peptide
Recombinant Peptide
Linjeta


Peptide
Recombinant Peptide
liraglutide


Peptide
Synthetic Peptide
liraglutide biobetter


Peptide
Recombinant Peptide
liraglutide biosimilar


Peptide
Synthetic Peptide
livoletide


Peptide
Synthetic Peptide
lixisenatide


Peptide
Synthetic Peptide
lobradimil


Peptide
Synthetic Peptide
LP-003


Peptide
Synthetic Peptide
LTX-315


Peptide
Synthetic Peptide; Vaccine
LTX-315 + tertomotide


Peptide
Synthetic Peptide
LTX-401


Peptide
Synthetic Peptide
lutetium Lu 177 dotatate


Peptide
Synthetic Peptide
LY-2510924


Peptide
Synthetic Peptide
LY-3143753


Peptide
Synthetic Peptide
LY-3185643


Peptide
Recombinant Peptide
LY-3209590


Peptide
Synthetic Peptide
LY-3305677


Peptide
Synthetic Peptide
LY-355703


Peptide
Recombinant Peptide
LY-900027


Peptide
Recombinant Peptide
Lyumjev


Peptide
Synthetic Peptide
M-012


Peptide
Recombinant Peptide
Macrulin


Peptide
Synthetic Peptide
MALP-2S


Peptide
Synthetic Peptide
mannatide


Peptide
Synthetic Peptide
metenkefalin


Peptide
Synthetic Peptide
mibenratide


Peptide
Synthetic Peptide
mifamurtide


Peptide
Synthetic Peptide
mitolactol


Peptide
Recombinant Peptide
MOD-1001


Peptide
Recombinant Peptide
MOD-1002


Peptide
Recombinant Peptide
MOD-6030


Peptide
Recombinant Peptide
MOD-6031


Peptide
Synthetic Peptide
motixafortide


Peptide
Synthetic Peptide
Motrem


Peptide
Synthetic Peptide
MP-3167


Peptide
Synthetic Peptide
MPE-002


Peptide
Recombinant Peptide
MSTMB-103


Peptide
Synthetic Peptide
MT-1002


Peptide
Synthetic Peptide
MTX-1604


Peptide
Synthetic Peptide
MVT-602


Peptide
Synthetic Peptide
NAX-8102


Peptide
Synthetic Peptide
NBI-6024


Peptide
Synthetic Peptide
NBI-69734


Peptide
Synthetic Peptide
NBP-14


Peptide
Synthetic Peptide
nemifitide ditriflutate


Peptide
Synthetic Peptide
nepadutant


Peptide
Synthetic Peptide
Nephrilin


Peptide
Recombinant Peptide
nerinetide


Peptide
Synthetic Peptide
Nerofe


Peptide
Recombinant Peptide
nesiritide


Peptide
Recombinant Peptide
Neucardin


Peptide
Recombinant Peptide
NL-005


Peptide
Synthetic Peptide
NLY-001


Peptide
Recombinant Peptide
NN-1952


Peptide
Recombinant Peptide
NN-1954


Peptide
Recombinant Peptide
NN-1955


Peptide
Recombinant Peptide
NN-1956


Peptide
Recombinant Peptide
NN-1965


Peptide
Synthetic Peptide
NN-9277


Peptide
Synthetic Peptide
NN-9423


Peptide
Recombinant Peptide
NN-9513


Peptide
Synthetic Peptide
NN-9536


Peptide
Synthetic Peptide
NN-9747


Peptide
Synthetic Peptide
NN-9775


Peptide
Synthetic Peptide
NN-9838


Peptide
Synthetic Peptide
NN-9931


Peptide
Synthetic Peptide
NNZ-2591


Peptide
Synthetic Peptide
NOV-004


Peptide
Synthetic Peptide
NRP-2945


Peptide
Synthetic Peptide
NRX-1051


Peptide
Recombinant Peptide
NsG-0501


Peptide
Recombinant Peptide
NTRA-2112


Peptide
Recombinant Peptide
NTRA-9620


Peptide
Synthetic Peptide
NX-210


Peptide
Recombinant Peptide
OA-150


Peptide
Synthetic Peptide
OB-3


Peptide
Synthetic Peptide
obinepitide


Peptide
Synthetic Peptide
octreotide


Peptide
Synthetic Peptide
octreotide acetate


Peptide
Synthetic Peptide
octreotide acetate CR


Peptide
Synthetic Peptide
octreotide acetate LA


Peptide
Synthetic Peptide
octreotide acetate LAR


Peptide
Synthetic Peptide
octreotide acetate MAR


Peptide
Synthetic Peptide
octreotide acetate microspheres


Peptide
Synthetic Peptide
octreotide acetate PR


Peptide
Synthetic Peptide
octreotide acetate SR


Peptide
Synthetic Peptide
octreotide LA


Peptide
Synthetic Peptide
OHR/AVR-118


Peptide
Recombinant Peptide
OI-320GT


Peptide
Recombinant Peptide
OI-338GT


Peptide
Synthetic Peptide
OK-201


Peptide
Synthetic Peptide
OKI-179


Peptide
Synthetic Peptide
OKI-422


Peptide
Recombinant Peptide
OMO-103


Peptide
Recombinant Peptide
ONCase-PEG


Peptide
Synthetic Peptide
ONK-102


Peptide
Synthetic Peptide
ONL-1204


Peptide
Synthetic Peptide
Oratonin


Peptide
Synthetic Peptide
orilotimod potassium


Peptide
Synthetic Peptide
ornipressin


Peptide
Synthetic Peptide
ORTD-1


Peptide
Synthetic Peptide
OXE-103


Peptide
Recombinant Peptide
Oxymera


Peptide
Synthetic Peptide
oxyntomodulin


Peptide
Synthetic Peptide
oxytocin


Peptide
Synthetic Peptide
ozarelix


Peptide
Recombinant Peptide
Ozempic


Peptide
Synthetic Peptide
P-17


Peptide
Synthetic Peptide
P-28


Peptide
Synthetic Peptide
P-28R


Peptide
Synthetic Peptide
P-8


Peptide
Recombinant Peptide
parathyroid hormone


Peptide
Synthetic Peptide
pasireotide


Peptide
Synthetic Peptide
pasireotide LAR


Peptide
Recombinant Peptide
PB-1023


Peptide
Synthetic Peptide
PB-119


Peptide
Synthetic Peptide
PCO-01


Peptide
Synthetic Peptide
PCO-02


Peptide
Synthetic Peptide
PDC-31


Peptide
Recombinant Peptide
PE-0139


Peptide
Synthetic Peptide
PEG Exenatide


Peptide
Synthetic Peptide
pegapamodutide


Peptide
Synthetic Peptide
pegcetacoplan


Peptide
Synthetic Peptide
peginesatide


Peptide
Synthetic Peptide
Pegylated Thymalfasin


Peptide
Recombinant Peptide
PEN-221


Peptide
Peptide


Peptide
Synthetic Peptide
Peptide T


Peptide
Peptide
Peptide to Inhibit Amyloid Beta Peptide for




Alzheimer's Disease


Peptide
Peptide
Peptide to Inhibit GRP-78 for Melanoma


Peptide
Synthetic Peptide
PHIN-1138


Peptide
Synthetic Peptide
PHIN-837


Peptide
Synthetic Peptide
PI-0824


Peptide
Recombinant Peptide
PI-406


Peptide
Synthetic Peptide
pidotimod


Peptide
Synthetic Peptide
PIN-201104


Peptide
Synthetic Peptide
PL-3994


Peptide
Synthetic Peptide
PL-8177


Peptide
Synthetic Peptide
Plannexin


Peptide
Synthetic Peptide
plecanatide


Peptide
Synthetic Peptide
PLG-0206


Peptide
Synthetic Peptide
plitidepsin


Peptide
Synthetic Peptide
PMZ-2123


Peptide
Synthetic Peptide
PN-943


Peptide
Synthetic Peptide
PNT-2002


Peptide
Synthetic Peptide
polyethylene glycol loxenatide LAR


Peptide
Synthetic Peptide
PP-1420


Peptide
Synthetic Peptide
pramlintide


Peptide
Synthetic Peptide
Preimplantation Factor


Peptide
Synthetic Peptide
PRI-002


Peptide
Synthetic Peptide
PRI-003


Peptide
Synthetic Peptide
PRI-004


Peptide
Synthetic Peptide
protamine sulfate


Peptide
Recombinant Peptide
protamine zinc insulin


Peptide
Recombinant Peptide
Protaphane


Peptide
Synthetic Peptide
PT-302


Peptide
Synthetic Peptide
PT-320


Peptide
Synthetic Peptide
PT-330


Peptide
Synthetic Peptide
PTG-200


Peptide
Synthetic Peptide
PZ-128


Peptide
Peptide
QUB-3164


Peptide
Recombinant Peptide
rE-4


Peptide
Synthetic Peptide
REC-0438


Peptide
Recombinant Peptide
Recombinant Human Intestinal Trefoil




Factor


Peptide
Recombinant Peptide
Recombinant Peptide 1 to Agonize Insulin




Receptor for Type 1 and Type 2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize




Calcitonin Gene Related Peptide Receptor




for Osteoporosis and Hypertension


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize GHRH




for Cardiovascular, Central Nervous




System, Musculoskeletal and Metabolic




Disorders


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize GLP1R




for Type 2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize Insulin




receptor for Diabetes


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize Insulin




Receptor for Type 1 and Type 2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize Insulin




Receptor for Type 1 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize Insulin




Receptor for Type 2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize PTH-R




for Post Menopausal Osteoporosis


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize PTH1R




for Bone Fracture


Peptide
Recombinant Peptide
Recombinant Peptide to Agonize PTH1R




for Hypoparathyroidism


Peptide
Recombinant Peptide
Recombinant Peptide to Inhibit TNF Alpha




for Crohn's Disease, Asthma And




Metabolic Syndrome


Peptide
Recombinant Peptide
Recombinant Peptide-1 to Activate GLP-1




for Type 2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptides 6 to Agonize




Insulin Receptor for Type 1 and Type 2




Diabetes


Peptide
Recombinant Peptide
Recombinant Peptides to Activate GLP-1




for Type-2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptides to Agonize Insulin




Receptor for Type 1 and Type 2 Diabetes


Peptide
Recombinant Peptide
Recombinant Peptides to Agonize MFN2




for Charcot Marie Tooth Disease Type IIA




and Hypertrophic Cardiomyopathy


Peptide
Synthetic Peptide
Reg-O3


Peptide
Synthetic Peptide
relamorelin


Peptide
Synthetic Peptide
reltecimod sodium


Peptide
Recombinant Peptide
Rescue-G


Peptide
Synthetic Peptide
RGN-352


Peptide
Recombinant Peptide
Rh-RGD-Hirudin


Peptide
Synthetic Peptide
risuteganib


Peptide
Synthetic Peptide
romidepsin


Peptide
Synthetic Peptide
RPI-78M


Peptide
Synthetic Peptide
RPI-MN


Peptide
Recombinant Peptide
RTP-025


Peptide
Synthetic Peptide
rusalatide acetate


Peptide
Synthetic Peptide
Rybelsus


Peptide
Recombinant Peptide
SAR-161271


Peptide
Synthetic Peptide
SAR-425899


Peptide
Recombinant Peptide
Saxenda


Peptide
Synthetic Peptide
SBI-1301


Peptide
Synthetic Peptide
SBT-20


Peptide
Synthetic Peptide
SBT-272


Peptide
Synthetic Peptide
SCO-094


Peptide
Synthetic Peptide
SER-130


Peptide
Synthetic Peptide
setmelanotide


Peptide
Synthetic Peptide
setmelanotide ER


Peptide
Synthetic Peptide
SGX-943


Peptide
Recombinant Peptide
somatostatin


Peptide
Recombinant Peptide
somatrem


Peptide
Recombinant Peptide
somatrogon


Peptide
Synthetic Peptide
SORC-13


Peptide
Synthetic Peptide
sovateltide


Peptide
Synthetic Peptide
SRI-31277


Peptide
Synthetic Peptide
STR-324


Peptide
Synthetic Peptide
Synthetic Peptide 1 to Inhibit PD-L1 for




Oncology


Peptide
Synthetic Peptide
Synthetic Peptide for Dengue


Peptide
Synthetic Peptide
Synthetic Peptide for Huntington Disease


Peptide
Synthetic Peptide
Synthetic Peptide for Oncology


Peptide
Synthetic Peptide
Synthetic Peptide for Zika Virus Infection


Peptide
Synthetic Peptide
Synthetic Peptide to Agonize GLP1R for




Type 2 Diabetes


Peptide
Synthetic Peptide
Synthetic Peptide to Agonize Insulin




Receptor for Type 2 Diabetes


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit Alpha




Synuclein for Parkinson's Disease


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit Connexin 43




for Optic Neuropathy


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit ELK1 for




Central Nervous System Disorders


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit PCSK9 for




Hypercholesterolemia


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit SOD1 for




Amyotrophic Lateral Sclerosis


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit Tau for




Tauopathies


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit TNF-Alpha for




Rheumatoid Arthritis


Peptide
Synthetic Peptide
Synthetic Peptide to Inhibit VEGFD for




Oncology


Peptide
Synthetic Peptide
Synthetic Peptide to Modulate GHSR for




Chronic Kidney Disease


Peptide
Synthetic Peptide
Synthetic Peptide to Target CCKBR for




Medullary Thyroid Cancer


Peptide
Synthetic Peptide
Synthetic Peptide to Target Somatostatin




Receptor for Neuroendocrine




Gastroenteropancreatic Tumors


Peptide
Synthetic Peptide
Synthetic Peptide to Target Somatostatin




Receptor for Neuroendocrine Tumors


Peptide
Synthetic Peptide
Synthetic Peptides to Activate TMEM173




for Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Agonize DOR1 and




MOR1 for Irritable Bowel Syndome with




Diarrhea


Peptide
Synthetic Peptide
Synthetic Peptides to Agonize GLP1R for




Type 2 Diabetes


Peptide
Synthetic Peptide
Synthetic Peptides to Agonize TLR for




Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Antagonize CXCR7




for Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit Beta Catenin




for Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit Complement




C3 for Unspecified Indication


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit Cyclin E for




Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit




CyclinA/CDK2 for Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit DRB1 for




Multiple Sclerosis


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit E1 and E2




Glycoprotein for HCV


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit Factor D for




Geographic Atrophy, Paroxysmal




Nocturnal Hemoglobinuria and Renal




Disease


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit Glycoprotein




VI for Thrombosis


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit MCL1 for




Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit SMURF2 for




Fibrosis and Oncology


Peptide
Synthetic Peptide
Synthetic Peptides to Inhibit TREM-1 for




Oncology, Sepsis, Rheumatoid Arthritis,




Retinopathy Of Prematurity and




Hemorrhagic Shock


Peptide
Recombinant Peptide
T-0005


Peptide
Synthetic Peptide
T-20K


Peptide
Recombinant Peptide
TAC-201


Peptide
Synthetic Peptide
Tatbeclin-1


Peptide
Recombinant Peptide
TBR-760


Peptide
Synthetic Peptide
TCANG-05


Peptide
Synthetic Peptide
TCMCB-07


Peptide
Recombinant Peptide
teduglutide


Peptide
Synthetic Peptide
teicoplanin


Peptide
Recombinant Peptide
teriparatide


Peptide
Recombinant Peptide
teriparatide acetate


Peptide
Recombinant Peptide
teriparatide biosimilar


Peptide
Synthetic Peptide
terlipressin


Peptide
Synthetic Peptide
tesamorelin acetate


Peptide
Synthetic Peptide
THR-149


Peptide
Synthetic Peptide
thymalfasin


Peptide
Synthetic Peptide


Peptide
Recombinant Peptide
tifacogin


Peptide
Synthetic Peptide
tirzepatide


Peptide
Synthetic Peptide
TPX-100


Peptide
Synthetic Peptide
triptorelin


Peptide
Synthetic Peptide
triptorelin acetate


Peptide
Synthetic Peptide
triptorelin acetate ER


Peptide
Synthetic Peptide
triptorelin acetate SR


Peptide
Synthetic Peptide
triptorelin pamoate


Peptide
Synthetic Peptide
triptorelin pamoate ER


Peptide
Synthetic Peptide
triptorelin SR


Peptide
Synthetic Peptide
TXA-127


Peptide
Synthetic Peptide
TXA-302


Peptide
Recombinant Peptide
UGP-281


Peptide
Recombinant Peptide
UGP-302


Peptide
Recombinant Peptide
Ultratard


Peptide
Recombinant Peptide
Uni-E4


Peptide
Synthetic Peptide
Upelior


Peptide
Synthetic Peptide
V-10


Peptide
Synthetic Peptide
VAL-201


Peptide
Synthetic Peptide
vapreotide acetate


Peptide
Synthetic Peptide
vasopressin


Peptide
Synthetic Peptide
veldoreotide ER


Peptide
Synthetic Peptide
veldoreotide IR


Peptide
Synthetic Peptide
VG-1177


Peptide
Recombinant Peptide
VIAcal


Peptide
Recombinant Peptide
vosoritide


Peptide
Recombinant Peptide
VTCG-15


Peptide
Peptide
XG-402


Peptide
Peptide
XG-404


Peptide
Synthetic Peptide
Y-14


Peptide
Synthetic Peptide
YH-14618


Peptide
Synthetic Peptide
ziconotide


Peptide
Synthetic Peptide
zilucoplan


Peptide
Recombinant Peptide
Znsulin


Peptide
Synthetic Peptide
ZP-10000


Peptide
Synthetic Peptide
ZP-7570


Peptide
Synthetic Peptide
ZT-01


Peptide
Recombinant Peptide
ZT-031


Peptide
Synthetic Peptide
ZYKR-1
















TABLE 3







Enzymes









Broad class
Molecule Type
Drug Name





Enzyme
Recombinant Enzyme
AB-002


Enzyme
Recombinant Enzyme
ACN-00177


Enzyme
Recombinant Enzyme
agalsidase alfa


Enzyme
Recombinant Enzyme
agalsidase beta


Enzyme
Recombinant Enzyme
albutrepenonacog alfa ER


Enzyme
Recombinant Enzyme
alglucerase


Enzyme
Recombinant Enzyme
alglucosidase alfa


Enzyme
Recombinant Enzyme
alteplase


Enzyme
Recombinant Enzyme
alteplase biosimilar


Enzyme
Enzyme
ancrod


Enzyme
Enzyme
anistreplase


Enzyme
Recombinant Enzyme
apadamtase alfa


Enzyme
Recombinant Enzyme
APN-01


Enzyme
Recombinant Enzyme
asfotase alfa


Enzyme
Enzyme
asparaginase


Enzyme
Recombinant Enzyme
avalglucosidase alfa


Enzyme
Recombinant Enzyme
BCT-100


Enzyme
Recombinant Enzyme
bRESCAP


Enzyme
Enzyme
bromelains


Enzyme
Recombinant Enzyme
calaspargase pegol


Enzyme
Recombinant Enzyme
cerliponase alfa


Enzyme
Enzyme
chymopapain


Enzyme
Enzyme
chymotrypsin


Enzyme
Recombinant Enzyme
coagulation factor IX (recombinant)


Enzyme
Recombinant Enzyme
coagulation factor IX (recombinant) biosimilar


Enzyme
Recombinant Enzyme
coagulation factor VIIa (recombinant) biosimilar


Enzyme
Recombinant Enzyme
coagulation factor XIII A-subunit (recombinant)


Enzyme
Enzyme
collagenase clostridium histolyticum


Enzyme
Recombinant Enzyme
condoliase


Enzyme
Recombinant Enzyme
CP-205


Enzyme
Recombinant Enzyme
CUSA-081


Enzyme
Recombinant Enzyme
dalcinonacog alfa


Enzyme
Recombinant Enzyme
elapegademase


Enzyme
Recombinant Enzyme
elosulfase alfa


Enzyme
Recombinant Enzyme
ERYGEN


Enzyme
Recombinant Enzyme
exebacase


Enzyme
Recombinant Enzyme
galsulfase


Enzyme
Recombinant Enzyme
glucarpidase


Enzyme
Enzyme
hemocoagulase


Enzyme
Recombinant Enzyme
HGT-1111


Enzyme
Recombinant Enzyme
hRESCAP


Enzyme
Recombinant Enzyme
idursulfase


Enzyme
Recombinant Enzyme
idursulfase beta


Enzyme
Recombinant Enzyme
imiglucerase


Enzyme
Recombinant Enzyme
imiglucerase biosimilar


Enzyme
Recombinant Enzyme
imlifidase


Enzyme
Recombinant Enzyme
JR-141


Enzyme
Recombinant Enzyme
JZP-458


Enzyme
Recombinant Enzyme
KTP-001


Enzyme
Recombinant Enzyme
laronidase


Enzyme
Recombinant Enzyme
lesinidase alfa


Enzyme
Recombinant Enzyme
Lumizyme


Enzyme
Recombinant Enzyme
marzeptacog alfa (activated)


Enzyme
Recombinant Enzyme
MEDI-6012


Enzyme
Recombinant Enzyme
MOSS-AGAL


Enzyme
Recombinant Enzyme
ocriplasmin


Enzyme
Recombinant Enzyme
olipudase alfa


Enzyme
Recombinant Enzyme
OT-58


Enzyme
Enzyme
pegademase bovine


Enzyme
Recombinant Enzyme
pegadricase


Enzyme
Recombinant Enzyme
pegargiminase


Enzyme
Recombinant Enzyme
pegaspargase


Enzyme
Recombinant Enzyme
pegaspargase biosimilar


Enzyme
Recombinant Enzyme
pegcrisantaspase


Enzyme
Recombinant Enzyme
pegloticase


Enzyme
Recombinant Enzyme
pegunigalsidase alfa


Enzyme
Recombinant Enzyme
pegvaliase


Enzyme
Recombinant Enzyme
pegvorhyaluronidase alfa


Enzyme
Recombinant Enzyme
pegzilarginase


Enzyme
Recombinant Enzyme
PF-05230907


Enzyme
Enzyme
PRP


Enzyme
Recombinant Enzyme
PT-01


Enzyme
Recombinant Enzyme
ranpirnase


Enzyme
Recombinant Enzyme
rasburicase


Enzyme
Recombinant Enzyme


Enzyme
Recombinant Enzyme
Recombinant Glucosylceramidase Replacement for




Type I and Type III Gaucher's Disease


Enzyme
Recombinant Enzyme
Recombinant Human Alkaline Phosphatase




Replacement for Acute Renal Failure,




Hypophosphatasia, Sepsis and Ulcerative Colitis


Enzyme
Recombinant Enzyme
Recombinant Urate Oxidase Replacement for Acute




Hyperuricemia


Enzyme
Recombinant Enzyme
reteplase


Enzyme
Recombinant Enzyme
sebelipase alfa


Enzyme
Recombinant Enzyme
SHP-610


Enzyme
Enzyme
SOBI-003


Enzyme
Recombinant Enzyme
Spectrila


Enzyme
Recombinant Enzyme
staphylokinase


Enzyme
Enzyme
streptokinase


Enzyme
Recombinant Enzyme
TAK-611


Enzyme
Recombinant Enzyme
taliglucerase alfa


Enzyme
Recombinant Enzyme
tenecteplase


Enzyme
Recombinant Enzyme
TNX-1300


Enzyme
Recombinant Enzyme
tonabacase


Enzyme
Recombinant Enzyme
tralesinidase alfa


Enzyme
Enzyme
urokinase


Enzyme
Recombinant Enzyme
velaglucerase alfa


Enzyme
Recombinant Enzyme
velmanase alfa


Enzyme
Recombinant Enzyme
vestronidase alfa


Enzyme
Recombinant Enzyme
vonapanitase


Enzyme
Recombinant Enzyme
VX-210
















TABLE 4







Proteins









Broad Class
Molecule Type
Drug Name





Protein
Recombinant Protein
3K3A-APC


Protein
Fusion Protein
abatacept


Protein
Recombinant Protein
abicipar pegol


Protein
Protein
abobotulinumtoxin A next generation


Protein
Protein
abobotulinumtoxinA


Protein
Recombinant Protein
ABY-035


Protein
Recombinant Protein
ABY-039


Protein
Protein
ACP-014


Protein
Recombinant Protein
ACT-101


Protein
Fusion Protein
AD-214


Protein
Fusion Protein
aflibercept


Protein
Fusion Protein
aflibercept biosimilar


Protein
Fusion Protein
AGT-181


Protein
Fusion Protein
AGT-182


Protein
Fusion Protein
AKR-001


Protein
Protein
Albicin


Protein
Recombinant Protein
albiglutide


Protein
Fusion Protein
albinterferon alfa-2b


Protein
Recombinant Protein
aldafermin


Protein
Recombinant Protein
aldesleukin


Protein
Fusion Protein
alefacept


Protein
Fusion Protein
ALKS-4230


Protein
Fusion Protein
ALPN-101


Protein
Fusion Protein
ALT-801


Protein
Fusion Protein
ALTP-1


Protein
Fusion Protein
ALX-148


Protein
Recombinant Protein
AMRS-001


Protein
Recombinant Protein
anakinra


Protein
Recombinant Protein
ancestim


Protein
Recombinant Protein
andexanet alfa


Protein
Recombinant Protein
antihemophilic factor (recombinant)


Protein
Recombinant Protein
antihemophilic factor (human)


Protein
Recombinant Protein
antihemophilic factor (recombinant) biosimilar


Protein
Fusion Protein
antihemophilic factor (recombinant), FcFusion




protein


Protein
Recombinant Protein
antihemophilic factor (recombinant), PEGylated


Protein
Recombinant Protein
antihemophilic factor (recombinant),




plasma/albumin free


Protein
Recombinant Protein
antihemophilic factor (recombinant),




plasma/albumin free method


Protein
Recombinant Protein
antihemophilic factor (recombinant), porcine




sequence


Protein
Recombinant Protein
antihemophilic factor (recombinant), single chain


Protein
Recombinant Protein
antithrombin (recombinant)


Protein
Fusion Protein
APN-301


Protein
Fusion Protein
APO-010


Protein
Fusion Protein
Aravive-S6


Protein
Fusion Protein
asunercept


Protein
Fusion Protein
atacicept


Protein
Fusion Protein
ATYR-1923


Protein
Recombinant Protein
ATYR-1940


Protein
Recombinant Protein
AU-011


Protein
Recombinant Protein
aviscumine


Protein
Recombinant Protein
avotermin


Protein
Fusion Protein
balugrastim


Protein
Recombinant Protein
batroxobin


Protein
Recombinant Protein
BBT-015


Protein
Recombinant Protein
BCD-131


Protein
Protein
bee venom


Protein
Fusion Protein
belatacept


Protein
Recombinant Protein
bempegaldesleukin


Protein
Protein
beractant


Protein
Recombinant Protein
BG-8962


Protein
Fusion Protein
bintrafusp alfa


Protein
Recombinant Protein
BIO89-100


Protein
Fusion Protein
BIVV-001


Protein
Fusion Protein
blisibimod


Protein
Recombinant Protein; Small
boceprevir + peginterferon alfa-2b + ribavirin



Molecule


Protein
Protein
botulinum toxin type A


Protein
Protein
BXQ-350


Protein
Protein
C1 esterase inhibitor (human)


Protein
Recombinant Protein
C1-esterase inhibitor


Protein
Protein
Cadisurf


Protein
Recombinant Protein
Cardiotrophin-1


Protein
Protein
CB-24


Protein
Fusion Protein
CD-24Fc


Protein
Recombinant Protein
CDX-301


Protein
Recombinant Protein
cepeginterferon alfa-2b


Protein
Recombinant Protein
CER-001


Protein
Recombinant Protein
CG-100


Protein
Recombinant Protein
CG-367


Protein
Recombinant Protein
choriogonadotropin alfa


Protein
Recombinant Protein
chorionic gonadotropin


Protein
Recombinant Protein
CIGB-128


Protein
Protein
CIGB-845


Protein
Recombinant Protein
cimaglermin alfa


Protein
Recombinant Protein
cintredekin besudotox


Protein
Fusion Protein
coagulation factor IX (recombinant), Fc fusion




protein


Protein
Recombinant Protein
coagulation factor IX (recombinant), glycopegylated


Protein
Recombinant Protein
coagulation Factor VIIa (Recombinant)


Protein
Recombinant Protein
coagulation factor VIII (recombinant) biosimilar


Protein
Fusion Protein
conbercept


Protein
Recombinant Protein
conestat alfa


Protein
Recombinant Protein
corifollitropin alfa


Protein
Fusion Protein
CSL-689


Protein
Recombinant Protein
CSL-730


Protein
Fusion Protein
CTI-1601


Protein
Fusion Protein
CUE-101


Protein
Recombinant Protein
CVBT-141A


Protein
Recombinant Protein
CVBT-141C


Protein
Recombinant Protein
CYT-6091


Protein
Recombinant Protein
CYT-99007


Protein
Recombinant Protein
Cyto-012


Protein
Recombinant Protein
dapiclermin


Protein
Recombinant Protein
darbepoetin alfa


Protein
Recombinant Protein
darbepoetin alfa biosimilar LA


Protein
Recombinant Protein
darbepoetin alfa LA


Protein
Fusion Protein
darleukin


Protein
Fusion Protein
daromun


Protein
Fusion Protein
dazodalibep


Protein
Fusion Protein
Dekavil


Protein
Recombinant Protein
denenicokin


Protein
Fusion Protein
denileukin diftitox


Protein
Protein
Dextran-Hemoglobin


Protein
Fusion Protein
DI-Leu16-IL2


Protein
Recombinant Protein
dianexin


Protein
Recombinant Protein
dibotermin alfa


Protein
Recombinant Protein
DM-199


Protein
Fusion Protein
DMX-101


Protein
Fusion Protein
DNL-310


Protein
Recombinant Protein
drotrecogin alfa (activated)


Protein
Fusion Protein
DSP-107


Protein
Fusion Protein
dulaglutide


Protein
Recombinant Protein
ecallantide


Protein
Recombinant Protein
ECI-301


Protein
Recombinant Protein
edodekin alfa


Protein
Fusion Protein
efavaleukin alfa


Protein
Fusion Protein
efineptakin alfa


Protein
Recombinant Protein
efinopegdutide


Protein
Recombinant Protein
eflapegrastim


Protein
Recombinant Protein
efpegsomatropin


Protein
Fusion Protein
eftansomatropin alfa


Protein
Fusion Protein
eftilagimod alfa


Protein
Fusion Protein
eftozanermin alfa


Protein
Recombinant Protein
empegfilgrastim


Protein
Recombinant Protein
entolimod


Protein
Fusion Protein
envafolimab


Protein
Recombinant Protein
epidermal growth factor


Protein
Recombinant Protein
epoetin alfa


Protein
Recombinant Protein
epoetin alfa Long Acting


Protein
Recombinant Protein
epoetin beta


Protein
Recombinant Protein
epoetin delta


Protein
Recombinant Protein
epoetin theta


Protein
Recombinant Protein
epoetin zeta


Protein
Recombinant Protein
ErepoXen


Protein
Fusion Protein
etanercept


Protein
Fusion Protein
etanercept biosimilar


Protein
Protein
EYS-611


Protein
Fusion Protein
F-627


Protein
Fusion Protein
F-652


Protein
Fusion Protein
F-899


Protein
Recombinant Protein
Fertavid


Protein
Fusion Protein
fexapotide triflutate


Protein
Fusion Protein
fibromun


Protein
Recombinant Protein
filgrastim


Protein
Recombinant Protein
follicle stimulating hormone


Protein
Recombinant Protein
follitropin alfa


Protein
Recombinant Protein


Protein
Recombinant Protein
follitropin beta


Protein
Recombinant Protein
follitropin delta


Protein
Recombinant Protein
FOV-2501


Protein
Recombinant Protein
FSH-GEX


Protein
Fusion Protein


Protein
Fusion Protein
Fusion Protein to Antagonize EGFR for




Glioblastoma Multiforme and Malignant Glioma


Protein
Fusion Protein
Fusion Protein to Inhibit CD25 for Oncology


Protein
Fusion Protein
Fusion Protein to Target Mesothelin for Oncology


Protein
Recombinant Protein
GEM-ONJ


Protein
Protein
gemibotulinumtoxin A


Protein
Recombinant Protein
GR-007


Protein

GT-0486


Protein
Fusion Protein
GXG-3


Protein
Fusion Protein
GXG-6


Protein
Protein
Haegarda


Protein
Protein
haptoglobin (human)


Protein
Fusion Protein
HB-0021


Protein
Protein
hemoglobin glutamer-250 (bovine)


Protein
Protein
hemoglobin raffimer


Protein
Recombinant Protein
HER-902


Protein
Recombinant Protein
HM-15912


Protein
Fusion Protein
HX-009


Protein
Fusion Protein
IBI-302


Protein
Fusion Protein
ICON-1


Protein
Fusion Protein
IGN-002


Protein
Fusion Protein
IMCF-106C


Protein
Fusion Protein
IMM-01


Protein
Protein
INB-03


Protein
Fusion Protein
inbakicept


Protein
Fusion Protein
INBRX-101


Protein
Protein
incobotulinumtoxin A


Protein
Protein
INS-068


Protein
Protein
interferon alfa


Protein
Recombinant Protein
interferon alfa-2a


Protein
Recombinant Protein
interferon alfa-2b


Protein
Recombinant Protein; Small
interferon alfa-2b + ribavirin



Molecule


Protein
Recombinant Protein
interferon alfa-n3


Protein
Recombinant Protein
interferon alfacon-1


Protein
Recombinant Protein
interferon alpha-n1


Protein
Recombinant Protein
interferon beta-1a


Protein
Recombinant Protein
interferon beta-1b


Protein
Recombinant Protein
interferon gamma-1b


Protein
Recombinant Protein
IRL-201805


Protein
Recombinant Protein
KAN-101


Protein
Fusion Protein
KD-033


Protein
Protein
KER-050


Protein
Fusion Protein
KH-903


Protein
Recombinant Protein
KMRC-011


Protein
Recombinant Protein
Kovaltry


Protein
Recombinant Protein
KP-100IT


Protein
Recombinant Protein
lenograstim


Protein
Recombinant Protein
lepirudin


Protein
Fusion Protein
LEVI-04


Protein
Recombinant Protein
liatermin


Protein
Fusion Protein
LIB-003


Protein
Recombinant Protein
lipegfilgrastim


Protein
Fusion Protein
LMB-100


Protein
Recombinant Protein
lonapegsomatropin


Protein
Protein
LTI-01


Protein
Fusion Protein
luspatercept


Protein
Recombinant Protein
lusupultide


Protein
Recombinant Protein
lutropin alfa


Protein
Recombinant Protein
M-9241


Protein
Fusion Protein
MDNA-55


Protein
Recombinant Protein
mecasermin


Protein
Recombinant Protein
mecasermin rinfabate


Protein
Protein
Menopur


Protein
Protein
menotropins


Protein
Recombinant Protein
methoxy polyethylene glycol-epoetin beta


Protein
Recombinant Protein
metreleptin


Protein
Recombinant Protein
MG-29


Protein
Recombinant Protein
molgramostim


Protein
Recombinant Protein
MP-0250


Protein
Recombinant Protein
MP-0274


Protein
Recombinant Protein
MP-0310


Protein
Fusion Protein
MT-3724


Protein
Recombinant Protein
Multiferon


Protein
Recombinant Protein
Multikine


Protein
Recombinant Protein
NA-704


Protein
Fusion Protein
naptumomab estafenatox


Protein
Recombinant Protein
NE-180


Protein
Recombinant Protein
nepidermina


Protein
Recombinant Protein
NGM-386


Protein
Recombinant Protein
NGM-395


Protein
Fusion Protein
NGR-hTNF


Protein
Protein
nivobotulinumtoxin A


Protein
Fusion Protein
NIZ-985


Protein
Recombinant Protein
NKTR-255


Protein
Recombinant Protein
NKTR-358


Protein
Recombinant Protein
NL-201


Protein
Recombinant Protein
NMIL-121


Protein
Recombinant Protein
NN-7128


Protein
Protein
NN-9215


Protein
Recombinant Protein
NN-9499


Protein
Recombinant Protein
novaferon


Protein
Fusion Protein
NPT-088


Protein
Fusion Protein
NPT-189


Protein
Protein
NStride APS


Protein
Fusion Protein
olamkicept


Protein
Protein
onabotulinumtoxin A


Protein
Protein
onabotulinumtoxinA biosimilar


Protein
Protein
onabotulinumtoxinA SR


Protein
Recombinant Protein
Oncolipin-IT


Protein
Recombinant Protein
OPK-88005


Protein
Fusion Protein
oportuzumab monatox


Protein
Recombinant Protein
oprelvekin


Protein
Recombinant Protein
OPT-302


Protein
Protein
OTO-413


Protein
Fusion Protein
OXS-1550


Protein
Fusion Protein
OXS-3550


Protein
Recombinant Protein
palifermin


Protein
Fusion Protein
PB-1046


Protein
Recombinant Protein
PBB-8-IN


Protein
Recombinant Protein
PD-1 Antagonist + ropeginterferon alfa-2b


Protein
Recombinant Protein
PEG-EPO


Protein
Recombinant Protein
pegbelfermin


Protein
Recombinant Protein
pegfilgrastim


Protein
Recombinant Protein
pegilodecakin


Protein
Recombinant Protein
peginterferon alfa-2a


Protein
Recombinant Protein; Small
peginterferon alfa-2a + ribavirin



Molecule


Protein
Recombinant Protein
peginterferon alfa-2b


Protein
Recombinant Protein; Small
peginterferon alfa-2b + ribavirin



Molecule


Protein
Recombinant Protein
peginterferon beta-1a


Protein
Recombinant Protein
peginterferon lambda-1a


Protein
Recombinant Protein
pegvisomant


Protein
Fusion Protein
PF-06755347


Protein
Recombinant Protein
PIN-2


Protein
Protein
plasminogen (human)


Protein
Protein
plasminogen (human) 1


Protein
Fusion Protein
PR-15


Protein
Protein
prabotulinumtoxin A biosimilar


Protein
Recombinant Protein
Prolanta


Protein
Recombinant Protein
PRS-080


Protein
Fusion Protein
PRS-343


Protein
Recombinant Protein
PRT-01


Protein
Protein
PRTX-100


Protein
Fusion Protein
PT-101


Protein
Recombinant Protein
PTR-01


Protein
Recombinant Protein
PTX-9908


Protein
Fusion Protein
QL-1207


Protein
Fusion Protein
RC-28


Protein
Recombinant Protein
RecD-1


Protein
Recombinant Protein
Recombinant Factor VIII Replacement for




Hemophilia A


Protein
Recombinant Protein
Recombinant Plasma Gelsolin Replacement for




Infectious Disease


Protein
Recombinant Protein
Recombinant Protein to Agonize BMPR1A,




BMPR1B and BMPR2 for Colorectal Cancer and




Glioblastoma Multiforme


Protein
Recombinant Protein
Recombinant Protein to Agonize IFNAR1 and




IFNAR2 for Oncology


Protein
Recombinant Protein
Recombinant Protein to Inhibit CD13 for




Lymphoma and Solid Tumor


Protein
Recombinant Protein
Recombinant Protein to Inhibit Coagulation Factor




XIV for Hemophilia A and Hemophilia B


Protein
Recombinant Protein
Recombinant Protein to Target FLT1 for Pre-




Eclampsia


Protein
Fusion Protein
reveglucosidase alfa


Protein
Fusion Protein
RG-6290


Protein
Fusion Protein
RG-7461


Protein
Fusion Protein
RG-7835


Protein
Recombinant Protein
RG-7880


Protein
Fusion Protein
rilonacept


Protein
Protein
rimabotulinumtoxin B


Protein
Recombinant Protein
RMC-035


Protein
Fusion Protein
RO-7227166


Protein
Fusion Protein
romiplostim


Protein
Fusion Protein
romiplostim biosimilar


Protein
Recombinant Protein
ropeginterferon alfa-2b


Protein
Recombinant Protein
RP-72


Protein
Fusion Protein
RPH-104


Protein
Fusion Protein
RPH-203


Protein
Fusion Protein
RSLV-132


Protein
Protein
RT-002


Protein
Fusion Protein
SAL-016


Protein
Recombinant Protein
Sanguinate


Protein
Fusion Protein
SAR-442085


Protein
Recombinant Protein
sargramostim


Protein
Recombinant Protein
SC-0806


Protein
Fusion Protein
SCB-313


Protein
Recombinant Protein
serelaxin


Protein
Fusion Protein
SFR-9216


Protein
Recombinant Protein
SHP-608


Protein
Fusion Protein
SHR-1501


Protein
Recombinant Protein
SIM-0710


Protein
Fusion Protein
SL-279252


Protein
Fusion Protein
SOC-101


Protein
Recombinant Protein
somapacitan


Protein
Recombinant Protein
somatropin


Protein
Recombinant Protein
somatropin pegol


Protein
Recombinant Protein
somatropin PR


Protein
Recombinant Protein
somatropin SR


Protein
Recombinant Protein
somavaratan


Protein
Fusion Protein
sotatercept


Protein
Recombinant Protein
sprifermin


Protein
Recombinant Protein
SubQ-8


Protein
Recombinant Protein
Sylatron


Protein
Fusion Protein
T-Guard


Protein
Recombinant Protein
TA-46


Protein
Recombinant Protein
tadekinig alfa


Protein
Fusion Protein
tagraxofusp


Protein
Protein
TAK-101


Protein
Fusion Protein
TAK-169


Protein
Fusion Protein
TAK-573


Protein
Fusion Protein
TAK-671


Protein
Fusion Protein
talditercept alfa


Protein
Recombinant Protein
tasonermin


Protein
Recombinant Protein
TBI-302


Protein
Recombinant Protein
tbo-filgrastim


Protein
Fusion Protein
tebentafusp


Protein
Fusion Protein
Teleukin


Protein
Fusion Protein
telitacicept


Protein
Fusion Protein
TG-103


Protein
Recombinant Protein
THOR-707


Protein
Recombinant Protein
thrombomodulin alfa


Protein
Recombinant Protein
thrombopoietin


Protein
Recombinant Protein
thyrotropin alfa


Protein
Recombinant Protein
tiprelestat


Protein
Recombinant Protein
topsalysin


Protein
Recombinant Protein
TransMID


Protein
Fusion Protein
trebananib


Protein
Fusion Protein
TTI-621


Protein
Fusion Protein
TTI-622


Protein
Fusion Protein
tucotuzumab celmoleukin


Protein
Recombinant Protein
TVN-102


Protein
Fusion Protein
UCHT-1


Protein
Fusion Protein
VAL-1221


Protein
Fusion Protein
Vas-01


Protein
Recombinant Protein
vatreptacog alfa (activated)


Protein
Fusion Protein
VB-4847


Protein
Recombinant Protein
von willebrand factor (recombinant)


Protein
Fusion Protein
YSPSL


Protein
Fusion Protein
ziv-aflibercept


Protein
Protein
ZK-001


Protein
Recombinant Protein
Zorbtive









B. Enzymes

The exogenous polypeptide may be an enzyme, e.g., an enzyme that catalyzes a biological reaction that is of use in the prevention or treatment of a condition or a disease, the prevention or treatment of a pathogen infection, the diagnosis of a disease, or the diagnosis of a disease or condition.


The enzyme may be a recombination enzyme, e.g., a Cre recombinase enzyme. In some aspects, the Cre recombinase enzyme is delivered by a PMP to a cell comprising a Cre reporter construct.


The enzyme may be an editing enzyme, e.g., a gene editing enzyme. In some aspects, the gene editing enzyme is a, e.g., a component of a CRISPR-Cas system (e.g., a Cas9 enzyme), a TALEN, or a zinc finger nuclease.


C. Pathogen Control Agents

The exogenous polypeptide may be a pathogen control agent, e.g., a polypeptide that is an antibacterial, antifungal, insecticidal, nematicidal, antiparasitic, or virucidal. In some instances, the PMP or PMP composition described herein includes a polypeptide or functional fragments or derivative thereof, that targets pathways in the pathogen. A PMP composition including a polypeptide as described herein can be administered to a pathogen, a vector thereof, in an amount and for a time sufficient to: (a) reach a target level (e.g., a predetermined or threshold level) of polypeptide concentration; and (b) decrease or eliminate the pathogen. In some instances, a PMP composition including a polypeptide as described herein can be administered to an animal having or at risk of an infection by a pathogen in an amount and for a time sufficient to: (a) reach a target level (e.g., a predetermined or threshold level) of polypeptide concentration in the animal; and (b) decrease or eliminate the pathogen. The polypeptides described herein may be formulated in a PMP composition for any of the methods described herein, and in certain instances, may be associated with the PMP thereof.


Examples of polypeptides that can be used herein can include an enzyme (e.g., a metabolic recombinase, a helicase, an integrase, a RNAse, a DNAse, or an ubiquitination protein), a pore-forming protein, a signaling ligand, a cell penetrating peptide, a transcription factor, a receptor, an antibody, a nanobody, a gene editing protein (e.g., CRISPR-Cas system, TALEN, or zinc finger), riboprotein, a protein aptamer, or a chaperone.


The PMP described herein may include a bacteriocin. In some instances, the bacteriocin is naturally produced by Gram-positive bacteria, such as Pseudomonas, Streptomyces, Bacillus, Staphylococcus, or lactic acid bacteria (LAB, such as Lactococcus lactis). In some instances, the bacteriocin is naturally produced by Gram-negative bacteria, such as Hafnia alvei, Citrobacter freundii, Klebsiella oxytoca, Klebsiella pneumonia, Enterobacter cloacae, Serratia plymithicum, Xanthomonas campestris, Erwinia carotovora, Ralstonia solanacearum, or Escherichia coli. Exemplary bacteriocins include, but are not limited to, Class I-IV LAB antibiotics (such as lantibiotics), colicins, microcins, and pyocins.


The PMP described herein may include an antimicrobial peptide (AMP). Any AMP suitable for inhibiting a microorganism may be used. AMPs are a diverse group of molecules, which are divided into subgroups on the basis of their amino acid composition and structure. The AMP may be derived or produced from any organism that naturally produces AMPs, including AMPs derived from plants (e.g., copsin), insects (e.g., mastoparan, poneratoxin, cecropin, moricin, melittin), frogs (e.g., magainin, dermaseptin, aurein), and mammals (e.g., cathelicidins, defensins and protegrins).


IV. Methods for Producing a PMP Comprising an Exogenous Polypeptide

In another aspect, the disclosure, in general, features a method of producing a PMP comprising an exogenous polypeptide. The method accordingly comprises (a) providing a solution comprising the exogenous polypeptide; and (b) loading the PMP with the exogenous polypeptide, wherein the loading causes the exogenous polypeptide to be encapsulated by the PMP.


The exogenous polypeptide may be placed in a solution, e.g., a phosphate-buffered saline (PBS) solution. The exogenous polypeptide may or may not be soluble in the solution. If the polypeptide is not soluble in the solution, the pH of the solution may be adjusted until the polypeptide is soluble in the solution. Insoluble polypeptides are also useful for loading.


Loading of the PMP with the exogenous polypeptide may comprise or consist of sonication of a solution comprising the exogenous polypeptide (e.g., a soluble or insoluble exogenous polypeptide) and a plurality of PMPs to induce poration of the PMPs and diffusion of the polypeptide into the PMPs, e.g., sonication according to the protocol described in Wang et al., Nature Comm., 4: 1867, 2013.


Alternatively, loading of the PMP with the exogenous polypeptide may comprise or consist of electroporation of a solution comprising the exogenous polypeptide (e.g., a soluble or insoluble exogenous polypeptide) and a plurality of PMPs, e.g., electroporation according to the protocol described in Wahlgren et al., Nucl. Acids. Res., 40(17), e130, 2012.


Alternatively, a small amount of a detergent (e.g., saponin) can be added to increase loading of the exogenous polypeptide into PMPs, e.g., as described in Fuhrmann et al., J Control Release., 205: 35-44, 2015.


Loading of the PMP with the exogenous polypeptide may comprise or consist of lipid extraction and lipid extrusion. Briefly, PMP lipids may be isolated by adding MeOH:CHCl3 (e.g., 3.75 mL 2:1 (v/v) MeOH:CHCl3) to PMPs in a PBS solution (e.g., 1 mL of PMPs in PBS) and vortexing the mixture. CHCl3 (e.g., 1.25 mL) and ddH2O (e.g., 1.25 mL) are then added sequentially and vortexed. The mixture is then centrifuged at 2,000 r.p.m. for 10 min at 22° C. in glass tubes to separate the mixture into two phases (aqueous phase and organic phase). The organic phase sample containing the PMP lipids is dried by heating under nitrogen (2 psi). To produce polypeptide-loaded PMPs, the isolated PMP lipids are mixed with the polypeptide solution and passed through a lipid extruder, e.g., according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015.


PMP lipids may also be isolated using methods that isolate additional plant lipid classes, e.g., glycosylinositol phosphorylceramides (GIPCs), as described in Casas et al., Plant Physiology, 170: 367-384, 2016. Briefly, to extract PMP lipids including GIPCs, chloroform:methanol:HCl (e.g., 3.5 mL of chloroform:methanol:HCl (200:100:1, v/v/v)) plus butylated hydroxytoluene (e.g., 0.01% (w/v) of butylated hydroxytoluene) is added to and incubated with the PMPs. Next, NaCl (e.g., 2 mL of 0.9% (w/v) NaCl) is added and vortexed for 5 minutes. The sample is then centrifuged to induce the organic phase to aggregate at the bottom of the glass tube, and the organic phase is collected. The upper phase may undergo reextraction with chloroform (e.g., 4 mL of pure chloroform) to isolate lipids. The organic phases are combined and dried. After drying, the aqueous phase is resuspended in water (e.g., 1 mL of pure water) and GIPCs are back-extracted using butanol-1 (e.g., 1 mL of butanol-1) twice. To produce polypeptide-loaded PMPs, the isolated PMP lipid phases are mixed with the polypeptide solution and are passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015. Alternatively, lipids may be extracted with methyl tertiary-butyl ether (MTBE):methanol:water plus butylated hydroxytoluene (BHT) or with propan-2-ol:hexane:water.


In some aspects, isolated GIPCs may be added to isolated PMP lipids.


In some aspects, loading of the PMP with the exogenous polypeptide comprises sonication and lipid extrusion, as described above.


In some aspects the exogenous polypeptide may be pre-complexed (e.g., using protamine sulfate), or a cationic lipid (e.g., DOTAP) may be added to facilitate encapsulation of negatively charged proteins.


Before use, the loaded PMPs may be purified, e.g., as described in Example 2, to remove polypeptides that are not bound to or encapsulated by the PMP. Loaded PMPs may be characterized as described in Example 3, and their stability may be tested as described in Example 4. Loading of the exogenous polypeptide may be quantified by methods known in the art for the quantification of proteins. For example, the Pierce Quantitative Colorimetric Peptide Assay may be used on a small sample of the loaded and unloaded PMPs, or a Western blot using specific antibodies may be used to detect the exogenous polypeptide. Alternatively, polypeptides may be fluorescently labeled, and fluorescence may be used to determine the labeled exogenous polypeptide concentration in loaded and unloaded PMPs.


V. Therapeutic Methods

The PMPs and PMP compositions described herein are useful in a variety of therapeutic methods, particularly for the prevention or treatment of a condition or disease or for the prevention or treatment of pathogen infections in animals. The present methods involve delivering the PMP compositions described herein to an animal.


Provided herein are methods of administering to an animal a PMP composition disclosed herein. The methods can be useful for preventing or treating a condition or disease or for preventing a pathogen infection in an animal.


For example, provided herein is a method of treating an animal having a fungal infection, wherein the method includes administering to the animal an effective amount of a PMP composition including a plurality of PMPs, wherein the plurality of PMPs comprise an exogenous polypeptide that is a pathogen control agent, e.g., an antifungal agent. In some instances, the fungal infection is caused by Candida albicans. In some instances, the method decreases or substantially eliminates the fungal infection.


In another aspect, provided herein is a method of treating an animal having a bacterial infection, wherein the method includes administering to the animal an effective amount of a PMP composition including a plurality of PMPs. In some instances, the method includes administering to the animal an effective amount of a PMP composition including a plurality of PMPs, wherein the plurality of PMPs comprise an exogenous polypeptide that is a pathogen control agent, e.g., an antibacterial agent. In some instances, the bacterium is a Streptococcus spp., Pneumococcus spp., Pseudomonas spp., Shigella spp, Salmonella spp., Campylobacter spp., or an Escherichia spp. In some instances, the method decreases or substantially eliminates the bacterial infection. In some instances, the animal is a human, a veterinary animal, or a livestock animal.


The present methods are useful to treat an infection (e.g., as caused by an animal pathogen) in an animal, which refers to administering treatment to an animal already suffering from a disease to improve or stabilize the animal's condition. This may involve reducing colonization of a pathogen in, on, or around an animal by one or more pathogens (e.g., by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%) relative to a starting amount and/or allow benefit to the individual (e.g., reducing colonization in an amount sufficient to resolve symptoms). In such instances, a treated infection may manifest as a decrease in symptoms (e.g., by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%). In some instances, a treated infection is effective to increase the likelihood of survival of an individual (e.g., an increase in likelihood of survival by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%) or increase the overall survival of a population (e.g., an increase in likelihood of survival by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, or 100%). For example, the compositions and methods may be effective to “substantially eliminate” an infection, which refers to a decrease in the infection in an amount sufficient to sustainably resolve symptoms (e.g., for at least 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, or 12 months) in the animal.


The present methods are useful to prevent an infection (e.g., as caused by an animal pathogen), which refers to preventing an increase in colonization in, on, or around an animal by one or more pathogens (e.g., by about 1%, 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or more than 100% relative to an untreated animal) in an amount sufficient to maintain an initial pathogen population (e.g., approximately the amount found in a healthy individual), prevent the onset of an infection, and/or prevent symptoms or conditions associated with infection. For example, individuals may receive prophylaxis treatment to prevent a fungal infection while being prepared for an invasive medical procedure (e.g., preparing for surgery, such as receiving a transplant, stem cell therapy, a graft, a prosthesis, receiving long-term or frequent intravenous catheterization, or receiving treatment in an intensive care unit), in immunocompromised individuals (e.g., individuals with cancer, with HIV/AIDS, or taking immunosuppressive agents), or in individuals undergoing long term antibiotic therapy.


The PMP composition can be formulated for administration or administered by any suitable method, including, for example, orally, intravenously, intramuscularly, subcutaneously, intradermally, percutaneously, intraarterially, intraperitoneally, intralesionally, intracranially, intraarticularly, intraprostatically, intrapleurally, intratracheally, intrathecally, intranasally, intravaginally, intrarectally, topically, intratumorally, peritoneally, subconjunctivally, intravesicularly, mucosally, intrapericardially, intraumbilically, intraocularly, intraorbitally, topically, transdermally, intravitreally (e.g., by intravitreal injection), by eye drop, by inhalation (e.g., by a nebulizer), by injection, by implantation, by infusion, by continuous infusion, by localized perfusion bathing target cells directly, by catheter, by lavage, in cremes, or in lipid compositions. The compositions utilized in the methods described herein can also be administered systemically or locally. The method of administration can vary depending on various factors (e.g., the compound or composition being administered and the severity of the condition, disease, or disorder being treated). In some instances, the PMP composition is administered intravenously, intramuscularly, subcutaneously, topically, orally, transdermally, intraperitoneally, intraorbitally, by implantation, by inhalation, intrathecally, intraventricularly, or intranasally. Dosing can be by any suitable route, e.g., orally or by injections, such as intravenous or subcutaneous injections, depending in part on whether the administration is brief or chronic. Various dosing schedules including but not limited to single or multiple administrations over various time-points, bolus administration, and pulse infusion are contemplated herein.


For the prevention or treatment of an infection described herein (when used alone or in combination with one or more other additional therapeutic agents) will depend on the type of disease to be treated, the severity and course of the disease, whether the is administered for preventive or therapeutic purposes, previous therapy, the patient's clinical history and response to the PMP composition. The PMP composition can be, e.g., administered to the patient at one time or over a series of treatments. For repeated administrations over several days or longer, depending on the condition, the treatment would generally be sustained until a desired suppression of disease symptoms occurs or the infection is no longer detectable. Such doses may be administered intermittently, e.g., every week or every two weeks (e.g., such that the patient receives, for example, from about two to about twenty, doses of the PMP composition. An initial higher loading dose, followed by one or more lower doses may be administered. However, other dosage regimens may be useful. The progress of this therapy is easily monitored by conventional techniques and assays.


In some instances, the amount of the PMP composition administered to individual (e.g., human) may be in the range of about 0.01 mg/kg to about 5 g/kg (e.g., about 0.01 mg/kg-0.1 mg/kg, about 0.1 mg/kg-1 mg/kg, about 1 mg/kg-10 mg/kg, about 10 mg/kg-100 mg/kg, about 100 mg/kg-1 g/kg, or about 1 g/kg-5 g/kg), of the individual's body weight. In some instances, the amount of the PMP composition administered to individual (e.g., human) is at least 0.01 mg/kg (e.g., at least 0.01 mg/kg, at least 0.1 mg/kg, at least 1 mg/kg, at least 10 mg/kg, at least 100 mg/kg, at least 1 g/kg, or at least 5 g/kg), of the individual's body weight. The dose may be administered as a single dose or as multiple doses (e.g., 2, 3, 4, 5, 6, 7, or more than 7 doses). In some instances, the PMP composition administered to the animal may be administered alone or in combination with an additional therapeutic agent or pathogen control agent. The dose of an antibody administered in a combination treatment may be reduced as compared to a single treatment. The progress of this therapy is easily monitored by conventional techniques.


In one aspect, the disclosure features a method for treating diabetes, the method comprising administering to a subject in need thereof an effective amount of a composition comprising a plurality of PMPs, wherein one or more exogenous polypeptides are encapsulated by the PMP. The administration of the plurality of PMPs may lower the blood sugar of the subject. In some aspects, the exogenous polypeptide is insulin.


VI. Agricultural Methods

The PMP compositions described herein are useful in a variety of agricultural methods, particularly for the prevention or treatment of pathogen infections in animals and for the control of the spread of such pathogens, e.g., by pathogen vectors. The present methods involve delivering the PMP compositions described herein to a pathogen or a pathogen vector.


The compositions and related methods can be used to prevent infestation by or reduce the numbers of pathogens or pathogen vectors in any habitats in which they reside (e.g., outside of animals, e.g., on plants, plant parts (e.g., roots, fruits and seeds), in or on soil, water, or on another pathogen or pathogen vector habitat. Accordingly, the compositions and methods can reduce the damaging effect of pathogen vectors by for example, killing, injuring, or slowing the activity of the vector, and can thereby control the spread of the pathogen to animals. Compositions disclosed herein can be used to control, kill, injure, paralyze, or reduce the activity of one or more of any pathogens or pathogen vectors in any developmental stage, e.g., their egg, nymph, instar, larvae, adult, juvenile, or desiccated forms. The details of each of these methods are described further below.


A. Delivery to a Pathogen


Provided herein are methods of delivering a PMP composition to a pathogen, such as one disclosed herein, by contacting the pathogen with a PMP composition comprising an exogenous polypeptide, e.g., a pathogen control agent. The methods can be useful for decreasing the fitness of a pathogen, e.g., to prevent or treat a pathogen infection or control the spread of a pathogen as a consequence of delivery of the PMP composition. Examples of pathogens that can be targeted in accordance with the methods described herein include bacteria (e.g., Streptococcus spp., Pneumococcus spp., Pseudomonas spp., Shigella spp, Salmonella spp., Campylobacter spp., or an Escherichia spp), fungi (Saccharomyces spp. or a Candida spp), parasitic insects (e.g., Cimex spp), parasitic nematodes (e.g., Heligmosomoides spp), or parasitic protozoa (e.g., Trichomoniasis spp).


For example, provided herein is a method of decreasing the fitness of a pathogen, the method including delivering to the pathogen any of the compositions described herein, wherein the method decreases the fitness of the pathogen relative to an untreated pathogen. In some embodiments, the method includes delivering a PMP composition comprising an exogenous polypeptide, e.g., a pathogen control agent to at least one habitat where the pathogen grows, lives, reproduces, feeds, or infests. In some instances of the methods described herein, the composition is delivered as a pathogen comestible composition for ingestion by the pathogen. In some instances of the methods described herein, the composition is delivered (e.g., to a pathogen) as a liquid, a solid, an aerosol, a paste, a gel, or a gas.


Also provided herein is a method of decreasing the fitness of a parasitic insect, wherein the method includes delivering to the parasitic insect a PMP composition including a plurality of PMPs comprising an exogenous polypeptide, e.g., a pathogen control agent. For example, the parasitic insect may be a bedbug. Other non-limiting examples of parasitic insects are provided herein. In some instances, the method decreases the fitness of the parasitic insect relative to an untreated parasitic insect


Additionally provided herein is a method of decreasing the fitness of a parasitic nematode, wherein the method includes delivering to the parasitic nematode a PMP composition including a plurality of PMPs comprising an exogenous polypeptide, e.g., a pathogen control agent. For example, the parasitic nematode is Heligmosomoides polygyrus. Other non-limiting examples of parasitic nematodes are provided herein. In some instances, the method decreases the fitness of the parasitic nematode relative to an untreated parasitic nematode.


Further provided herein is a method of decreasing the fitness of a parasitic protozoan, wherein the method includes delivering to the parasitic protozoan a PMP composition including a plurality of PMPs comprising an exogenous polypeptide, e.g., a pathogen control agent. For example, the parasitic protozoan may be T. vaginalis. Other non-limiting examples of parasitic protozoans are provided herein. In some instances, the method decreases the fitness of the parasitic protozoan relative to an untreated parasitic protozoan.


A decrease in the fitness of the pathogen as a consequence of delivery of a PMP composition can manifest in a number of ways. In some instances, the decrease in fitness of the pathogen may manifest as a deterioration or decline in the physiology of the pathogen (e.g., reduced health or survival) as a consequence of delivery of the PMP composition. In some instances, the fitness of an organism may be measured by one or more parameters, including, but not limited to, reproductive rate, fertility, lifespan, viability, mobility, fecundity, pathogen development, body weight, metabolic rate or activity, or survival in comparison to a pathogen to which the PMP composition has not been administered. For example, the methods or compositions provided herein may be effective to decrease the overall health of the pathogen or to decrease the overall survival of the pathogen. In some instances, the decreased survival of the pathogen is about 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or greater than 100% greater relative to a reference level (e.g., a level found in a pathogen that does not receive a PMP composition comprising an exogenous polypeptide, e.g., a pathogen control agent. In some instances, the methods and compositions are effective to decrease pathogen reproduction (e.g., reproductive rate, fertility) in comparison to a pathogen to which the PMP composition has not been administered. In some instances, the methods and compositions are effective to decrease other physiological parameters, such as mobility, body weight, life span, fecundity, or metabolic rate, by about 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or greater than 100% relative to a reference level (e.g., a level found in a pathogen that does not receive a PMP composition).


In some instances, the decrease in pest fitness may manifest as an increase in the pathogen's sensitivity to an antipathogen agent and/or a decrease in the pathogen's resistance to an antipathogen agent in comparison to a pathogen to which the PMP composition has not been delivered. In some instances, the methods or compositions provided herein may be effective to increase the pathogen's sensitivity to a pesticidal agent by about 2%, 5%, 10%, 20%, 30%, 40%, 50%, 60%, 70%, 80%, 90%, 100%, or greater than 100% relative to a reference level (e.g., a level found in a pest that does not receive a PMP composition).


In some instances, the decrease in pathogen fitness may manifest as other fitness disadvantages, such as a decreased tolerance to certain environmental factors (e.g., a high or low temperature tolerance), a decreased ability to survive in certain habitats, or a decreased ability to sustain a certain diet in comparison to a pathogen to which the pathogen control (composition has not been delivered. In some instances, the methods or compositions provided herein may be effective to decrease pathogen fitness in any plurality of ways described herein. Further, the PMP composition may decrease pathogen fitness in any number of pathogen classes, orders, families, genera, or species (e.g., 1 pathogen species, 2, 3, 4, 5, 6, 7, 8, 9, 10, 15, 20, 30, 40, 50, 60, 70, 80, 90, 100, 150, 200, 200, 250, 500, or more pathogen species). In some instances, the PMP composition acts on a single pest class, order, family, genus, or species.


Pathogen fitness may be evaluated using any standard methods in the art. In some instances, pest fitness may be evaluated by assessing an individual pathogen. Alternatively, pest fitness may be evaluated by assessing a pathogen population. For example, a decrease in pathogen fitness may manifest as a decrease in successful competition against other pathogens, thereby leading to a decrease in the size of the pathogen population.


VII. Methods for Treatment of Pathogens or Vectors Thereof

The PMP compositions and related methods described herein are useful to decrease the fitness of an animal pathogen and thereby treat or prevent infections in animals. Examples of animal pathogens, or vectors thereof, that can be treated with the present compositions or related methods are further described herein.


A. Fungi

The PMP compositions and related methods can be useful for decreasing the fitness of a fungus, e.g., to prevent or treat a fungal infection in an animal. Included are methods for delivering a PMP composition to a fungus by contacting the fungus with the PMP composition. Additionally or alternatively, the methods include preventing or treating a fungal infection (e.g., caused by a fungus described herein) in an animal at risk of or in need thereof, by administering to the animal a PMP composition.


The PMP compositions and related methods are suitable for treatment or preventing of fungal infections in animals, including infections caused by fungi belonging to Ascomycota (Fusarium oxysporum, Pneumocystis jirovecii, Aspergillus spp., Coccidioides immitis/posadasii, Candida albicans), Basidiomycota (Filobasidiella neoformans, Trichosporon), Microsporidia (Encephalitozoon cuniculi, Enterocytozoon bieneusi), Mucoromycotina (Mucor circinelloides, Rhizopus oryzae, Lichtheimia corymbifera).


In some instances, the fungal infection is one caused by a belonging to the phylum Ascomycota, Basidomycota, Chytridiomycota, Microsporidia, or Zygomycota. The fungal infection or overgrowth can include one or more fungal species, e.g., Candida albicans, C. tropicalis, C. parapsilosis, C. glabrata, C. auris, C. krusei, Saccharomyces cerevisiae, Malassezia globose, M. restricta, or Debaryomyces hansenii, Gibberella moniliformis, Alternaria brassicicola, Cryptococcus neoformans, Pneumocystis carinii, P. jirovecii, P. murina, P. oryctolagi, P. wakefieldiae, and Aspergillus clavatus. The fungal species may be considered a pathogen or an opportunistic pathogen.


In some instances, the fungal infection is caused by a fungus in the genus Candida (i.e., a Candida infection). For example, a Candida infection can be caused by a fungus in the genus Candida that is selected from the group consisting of C. albicans, C. glabrata, C. dubliniensis, C. krusei, C. auris, C. parapsilosis, C. tropicalis, C. orthopsilosis, C. guilliermondii, C. rugose, and C. lusitaniae. Candida infections that can be treated by the methods disclosed herein include, but are not limited to candidemia, oropharyngeal candidiasis, esophageal candidiasis, mucosal candidiasis, genital candidiasis, vulvovaginal candidiasis, rectal candidiasis, hepatic candidiasis, renal candidiasis, pulmonary candidiasis, splenic candidiasis, otomycosis, osteomyelitis, septic arthritis, cardiovascular candidiasis (e.g., endocarditis), and invasive candidiasis.


B. Bacteria

The PMP compositions and related methods can be useful for decreasing the fitness of a bacterium, e.g., to prevent or treat a bacterial infection in an animal. Included are methods for administering a PMP composition to a bacterium by contacting the bacteria with the PMP composition. Additionally or alternatively, the methods include preventing or treating a bacterial infection (e.g., caused by a bacteria described herein) in an animal at risk of or in need thereof, by administering to the animal a PMP composition.


The PMP compositions and related methods are suitable for preventing or treating a bacterial infection in animals caused by any bacteria described further below. For example, the bacteria may be one belonging to Bacillales (B. anthracis, B. cereus, S. aureus, L. monocytogenes), Lactobacillales (S. pneumoniae, S. pyogenes), Clostridiales (C. botulinum, C. difficile, C. perfringens, C. tetani), Spirochaetales (Borrelia burgdorferi, Treponema pallidum), Chlamydiales (Chlamydia trachomatis, Chlamydophila psittaci), Actinomycetales (C. diphtheriae, Mycobacterium tuberculosis, M. avium), Rickettsiales (R. prowazekii, R. rickettsii, R. typhi, A. phagocytophilum, E. chaffeensis), Rhizobiales (Brucella melitensis), Burkholderiales (Bordetella pertussis, Burkholderia mallei, B. pseudomallei), Neisseriales (Neisseria gonorrhoeae, N. meningitidis), Campylobacterales (Campylobacter jejuni, Helicobacter pylon), Legionellales (Legionella pneumophila), Pseudomonadales (A. baumannii, Moraxella catarrhalis, P. aeruginosa), Aeromonadales (Aeromonas sp.), Vibrionales (Vibrio cholerae, V. parahaemolyticus), Thiotrichales, Pasteurellales (Haemophilus influenzae), Enterobacteriales (Klebsiella pneumoniae, Proteus mirabilis, Yersinia pestis, Y. enterocolitica, Shigella flexneri, Salmonella enterica, E. coli).


EXAMPLES

The following are examples of the various methods of the invention. It is understood that various other embodiments may be practiced, given the general description provided above.


Example 1: Crude Isolation of Plant Messenger Packs from Plants

This example describes the crude isolation of plant messenger packs (PMPs) from various plant sources, including the leaf apoplast, seed apoplast, root, fruit, vegetable, pollen, phloem, xylem sap and plant cell culture medium.


Experimental Design:

a) PMP Isolation from the Apoplast of Arabidopsis thaliana Leaves



Arabidopsis (Arabidopsis thaliana Col-0) seeds are surface sterilized with 50% bleach and plated on 0.53 Murashige and Skoog medium containing 0.8% agar. The seeds are vernalized for 2 d at 4° C. before being moved to short-day conditions (9-h days, 22° C., 150 μEm−2). After 1 week, the seedlings are transferred to Pro-Mix PGX. Plants are grown for 4-6 weeks before harvest.


PMPs are isolated from the apoplastic wash of 4-6-week old Arabidopsis rosettes, as described by Rutter and Innes, Plant Physiol., 173(1): 728-741, 2017. Briefly, whole rosettes are harvested at the root and vacuum infiltrated with vesicle isolation buffer (20 mM MES, 2 mM CaCl2, and 0.1 M NaCl, pH 6).


Infiltrated plants are carefully blotted to remove excess fluid, placed inside 30-mL syringes, and centrifuged in 50 mL conical tubes at 700 g for 20 min at 2° C. to collect the apoplast extracellular fluid containing PMPs. Next, the apoplast extracellular fluid is filtered through a 0.85 μm filter to remove large particles, and PMPs are purified as described in Example 2.


b) PMP Isolation from the Apoplast of Sunflower Seeds


Intact sunflower seeds (H. annuus L.) and are imbibed in water for 2 hours, peeled to remove the pericarp, and the apoplastic extracellular fluid is extracted by a modified vacuum infiltration-centrifugation procedure, adapted from Regente et al., FEBS Letters, 583: 3363-3366, 2009. Briefly, seeds are immersed in vesicle isolation buffer (20 mM MES, 2 mM CaCl2, and 0.1 M NaCl, pH 6) and subjected to three vacuum pulses of 10 s, separated by 30 s intervals at a pressure of 45 kPa. The infiltrated seeds are recovered, dried on filter paper, placed in fritted glass filters, and centrifuged for 20 min at 400 g at 4° C. The apoplast extracellular fluid is recovered, filtered through a 0.85 μm filter to remove large particles, and PMPs are purified as described in Example 2.


c) PMP Isolation from Ginger Roots


Fresh ginger (Zingiber officinale) rhizomes are purchased from a local supplier and washed 3× with PBS. A total of 200 grams of washed roots is ground in a mixer (Osterizer 12-speed blender) at the highest speed for 10 min (pause 1 min for every 1 min of blending), and PMPs are isolated as described in Zhuang et al., J Extracellular Vesicles, 4(1): 28713, 2015. Briefly, gingerjuice is sequentially centrifuged at 1,000 g for 10 min, 3,000 g for 20 min and 10,000 g for 40 min to remove large particles from the PMP-containing supernatant. PMPs are purified as described in Example 2.


d) PMP Isolation from Grapefruit Juice


Fresh grapefruits (Citrus x paradisi) are purchased from a local supplier, the skins are removed, and the fruit is manually pressed, or ground in a mixer (Osterizer 12-speed blender) at the highest speed for 10 min (pause 1 min for every minute of blending) to collect the juice, as described by Wang et al., Molecular Therapy, 22(3): 522-534, 2014 with minor modifications. Briefly, juice/juice pulp is sequentially centrifuged at 1,000 g for 10 min, 3,000 g for 20 min, and 10,000 g for 40 min to remove large particles from the PMP-containing supernatant. PMPs are purified as described in Example 2.


e) PMP Isolation from a Broccoli Vegetable


Broccoli (Brassica oleracea var. italica) PMPs are isolated as previously described (Deng et al., Molecular Therapy, 25(7): 1641-1654, 2017). Briefly, fresh broccoli is purchased from a local supplier, washed three times with PBS, and ground in a mixer (Osterizer 12-speed blender) at the highest speed for 10 min (pause 1 min for every minute of blending). Broccoli juice is then sequentially centrifuged at 1,000 g for 10 min, 3,000 g for 20 min, and 10,000 g for 40 min to remove large particles from the PMP-containing supernatant. PMPs are purified as described in Example 2.


f) PMP Isolation from Olive Pollen


Olive (Olea europaea) pollen PMPs are isolated as previously described in Prado et al., Molecular Plant. 7(3):573-577, 2014. Briefly, olive pollen (0.1 g) is hydrated in a humid chamber at room temperature for 30 min before transferring to petri dishes (15 cm in diameter) containing 20 ml germination medium: 10% sucrose, 0.03% Ca(NO3)2, 0.01% KNO3, 0.02% MgSO4, and 0.03% H3BO3. Pollen is germinated at 30° C. in the dark for 16 h. Pollen grains are considered germinated only when the tube is longer than the diameter of the pollen grain. Cultured medium containing PMPs is collected and cleared of pollen debris by two successive filtrations on 0.85 um filters by centrifugation. PMPs are purified as described in Example 2.


g) PMP Isolation from Arabidopsis Phloem Sap



Arabidopsis (Arabidopsis thaliana Col-0) seeds are surface sterilized with 50% bleach and plated on 0.53 Murashige and Skoog medium containing 0.8% agar. The seeds are vernalized for 2 d at 4° C. before being moved to short-day conditions (9-h days, 22° C., 150 μEm−2). After 1 week, the seedlings are transferred to Pro-Mix PGX. Plants are grown for 4-6 weeks before harvest.


Phloem sap from 4-6-week old Arabidopsis rosette leaves is collected as described by Tetyuk et al., JoVE. 80, 2013. Briefly, leaves are cut at the base of the petiole, stacked, and placed in a reaction tube containing 20 mM K2-EDTA for one hour in the dark to prevent sealing of the wound. Leaves are gently removed from the container, washed thoroughly with distilled water to remove all EDTA, put in a clean tube, and phloem sap is collected for 5-8 hours in the dark. Leaves are discarded, phloem sap is filtered through a 0.85 μm filter to remove large particles, and PMPs are purified as described in Example 2.


h) PMP Isolation from Tomato Plant Xylem Sap


Tomato (Solanum lycopersicum) seeds are planted in a single pot in an organic-rich soil, such as Sunshine Mix (Sun Gro Horticulture, Agawam, Mass.) and maintained in a greenhouse between 22° C. and 28° C. About two weeks after germination, at the two true-leaf stage, the seedlings are transplanted individually into pots (10 cm diameter and 17 cm deep) filled with sterile sandy soil containing 90% sand and 10% organic mix. Plants are maintained in a greenhouse at 22-28° C. for four weeks.


Xylem sap from 4-week old tomato plants is collected as described by Kohlen et al., Plant Physiology. 155(2):721-734, 2011. Briefly, tomato plants are decapitated above the hypocotyl, and a plastic ring is placed around the stem. The accumulating xylem sap is collected for 90 min after decapitation. Xylem sap is filtered through a 0.85 μm filter to remove large particles, and PMPs are purified as described in Example 2.


i) PMP Isolation from Tobacco BY-2 Cell Culture Medium


Tobacco BY-2 (Nicotiana tabacum L cv. Bright Yellow 2) cells are cultured in the dark at 26° C., on a shaker at 180 rpm in MS (Murashige and Skoog, 1962) BY-2 cultivation medium (pH 5.8) comprising MS salts (Duchefa, Haarlem, Netherlands, at #M0221) supplemented with 30 g/L sucrose, 2.0 mg/L potassium dihydrogen phosphate, 0.1 g/L myo-inositol, 0.2 mg/L 2,4-dichlorophenoxyacetic acid, and 1 mg/L thiamine HCl. The BY-2 cells are subcultured weekly by transferring 5% (v/v) of a 7-day-old cell culture into 100 mL fresh liquid medium. After 72-96 hours, BY-2 cultured medium is collected and centrifuged at 300 g at 4° C. for 10 minutes to remove cells. The supernatant containing PMPs is collected and cleared of debris by filtration on 0.85 um filter. PMPs are purified as described in Example 2.


Example 2: Production of Purified Plant Messenger Packs (PMPs)

This example describes the production of purified PMPs from crude PMP fractions as described in Example 1, using ultrafiltration combined with size-exclusion chromatography, a density gradient (iodixanol or sucrose), and the removal of aggregates by precipitation or size-exclusion chromatography.


Experimental Design:

a) Production of Purified Grapefruit PMPs Using Ultrafiltration Combined with Size-Exclusion Chromatography


The crude grapefruit PMP fraction from Example 1a is concentrated using 100-kDA molecular weight cut-off (MWCO) Amicon spin filter (Merck Millipore). Subsequently, the concentrated crude PMP solution is loaded onto a PURE-EV size exclusion chromatography column (HansaBioMed Life Sciences Ltd) and isolated according to the manufacturer's instructions. The purified PMP-containing fractions are pooled after elution. Optionally, PMPs can be further concentrated using a 100-kDa MWCO Amicon spin filter, or by Tangential Flow Filtration (TFF). The purified PMPs are analyzed as described in Example 3.


b) Production of Purified Arabidopsis Apoplast PMPs Using an Iodixanol Gradient


Crude Arabidopsis leaf apoplast PMPs are isolated as described in Example 1a, and PMPs are produced by using an iodixanol gradient as described in Rutter and Innes, Plant Physiol. 173(1): 728-741, 2017. To prepare discontinuous iodixanol gradients (OptiPrep; Sigma-Aldrich), solutions of 40% (v/v), 20% (v/v), 10% (v/v), and 5% (v/v) iodixanol are created by diluting an aqueous 60% OptiPrep stock solution in vesicle isolation buffer (VIB; 20 mM MES, 2 mM CaCl2, and 0.1 M NaCl, pH6). The gradient is formed by layering 3 ml of 40% solution, 3 mL of 20% solution, 3 mL of 10% solution, and 2 mL of 5% solution. The crude apoplast PMP solution from Example 1a is centrifuged at 40,000 g for 60 min at 4° C. The pellet is resuspended in 0.5 ml of VIB and layered on top of the gradient. Centrifugation is performed at 100,000 g for 17 h at 4° C. The first 4.5 ml at the top of the gradient is discarded, and subsequently 3 volumes of 0.7 ml that contain the apoplast PMPs are collected, brought up to 3.5 mL with VIB and centrifuged at 100,000 g for 60 min at 4° C. The pellets are washed with 3.5 ml of VIB and repelleted using the same centrifugation conditions. The purified PMP pellets are combined for subsequent analysis, as described in Example 3.


c) Production of Purified Grapefruit PMPs Using a Sucrose Gradient


Crude grapefruit juice PMPs are isolated as described in Example 1d, centrifuged at 150,000 g for 90 min, and the PMP-containing pellet is resuspended in 1 ml PBS as described in Mu et al., Molecular Nutrition & Food Research. 58(7):1561-1573, 2014. The resuspended pellet is transferred to a sucrose step gradient (8%/15%/30%/45%/60%) and centrifuged at 150,000 g for 120 min to produce purified PMPs. Purified grapefruit PMPs are harvested from the 30%/45% interface, and subsequently analyzed, as described in Example 3.


d) Removal of Aggregates from Grapefruit PMPs


In order to remove protein aggregates from produced grapefruit PMPs as described in Example 1d or purified PMPs from Example 2a-c, an additional purification step can be included. The produced PMP solution is taken through a range of pHs to precipitate protein aggregates in solution. The pH is adjusted to 3, 5, 7, 9, or 11 with the addition of sodium hydroxide or hydrochloric acid. pH is measured using a calibrated pH probe. Once the solution is at the specified pH, it is filtered to remove particulates. Alternatively, the isolated PMP solution can be flocculated using the addition of charged polymers, such as Polymin-P or Praestol 2640. Briefly, 2-5 g per L of Polymin-P or Praestol 2640 is added to the solution and mixed with an impeller. The solution is then filtered to remove particulates. Alternatively, aggregates are solubilized by increasing salt concentration. NaCl is added to the PMP solution until it is at 1 mol/L. The solution is then filtered to purify the PMPs. Alternatively, aggregates are solubilized by increasing the temperature. The isolated PMP mixture is heated under mixing until it has reached a uniform temperature of 50° C. for 5 minutes. The PMP mixture is then filtered to isolate the PMPs. Alternatively, soluble contaminants from PMP solutions are separated by size-exclusion chromatography column according to standard procedures, where PMPs elute in the first fractions, whereas proteins and ribonucleoproteins and some lipoproteins are eluted later. The efficiency of protein aggregate removal is determined by measuring and comparing the protein concentration before and after removal of protein aggregates via BCA/Bradford protein quantification. The produced PMPs are analyzed as described in Example 3.


Example 3: Plant Messenger Pack Characterization

This example describes the characterization of PMPs produced as described in Example 1 or Example 2.


Experimental Design:

a) Determining PMP Concentration


PMP particle concentration is determined by Nanoparticle Tracking Analysis (NTA) using a Malvern NanoSight, nano flow cytometry using a NanoFCM, or by Tunable Resistive Pulse Sensing (TRPS) using an Spectradyne CS1, following the manufacturer's instructions. The protein concentration of purified PMPs is determined by using the DC Protein assay (Bio-Rad). The lipid concentration of purified PMPs is determined using a fluorescent lipophilic dye, such as DiOC6 (ICN Biomedicals) as described by Rutter and Innes, Plant Physiol. 173(1): 728-741, 2017. Briefly, purified PMP pellets from Example 2 are resuspended in 100 ml of 10 mM DiOC6 (ICN Biomedicals) diluted with MES buffer (20 mM MES, pH 6) plus 1% plant protease inhibitor cocktail (Sigma-Aldrich) and 2 mM 2,29-dipyridyl disulfide. The resuspended PMPs are incubated at 37° C. for 10 min, washed with 3 mL of MES buffer, repelleted (40,000 g, 60 min, at 4° C.), and resuspended in fresh MES buffer. DiOC6 fluorescence intensity is measured at 485 nm excitation and 535 nm emission.


b) Biophysical and Molecular Characterization of PMPs


PMPs are characterized by electron and cryo-electron microscopy on a JEOL 1010 transmission electron microscope, following the protocol from Wu et al., Analyst. 140(2):386-406, 2015. The size and zeta potential of the PMPs are also measured using a Malvern Zetasizer or iZon qNano, following the manufacturer's instructions. Lipids are isolated from PMPs using chloroform extraction and characterized with LC-MS/MS as demonstrated in Xiao et al. Plant Cell. 22(10): 3193-3205, 2010. Glycosyl inositol phosphorylceramides (GIPCs) lipids are extracted and purified as described by Cacas et al., Plant Physiology. 170: 367-384, 2016, and analyzed by LC-MS/MS as described above. Total RNA, DNA, and protein are characterized using Quant-It kits from Thermo Fisher according to instructions. Proteins on the PMPs are characterized by LC-MS/MS following the protocol in Rutter and Innes, Plant Physiol. 173(1): 728-741, 2017. RNA and DNA are extracted using Trizol, prepared into libraries with the TruSeq Total RNA with Ribo-Zero Plant kit and the Nextera Mate Pair Library Prep Kit from Illumina, and sequenced on an Illumina MiSeq following manufacturer's instructions.


Example 4: Characterization of Plant Messenger Pack Stability

This example describes measuring the stability of PMPs under a wide variety of storage and physiological conditions.


Experimental Design:

PMPs produced as described in Examples 1 and 2 are subjected to various conditions. PMPs are suspended in water, 5% sucrose, or PBS and left for 1, 7, 30, and 180 days at −20° C., 4° C., 20° C., and 37° C. PMPs are also suspended in water and dried using a rotary evaporator system and left for 1, 7, and 30, and 180 days at 4° C., 20° C., and 37° C. PMPs are also suspended in water or 5% sucrose solution, flash-frozen in liquid nitrogen and lyophilized. After 1, 7, 30, and 180 days, dried and lyophilized PMPs are then resuspended in water. The previous three experiments with conditions at temperatures above 0° C. are also exposed to an artificial sunlight simulator in order to determine content stability in simulated outdoor UV conditions. PMPs are also subjected to temperatures of 37° C., 40° C., 45° C., 50° C., and 55° C. for 1, 6, and 24 hours in buffered solutions with a pH of 1, 3, 5, 7, and 9 with or without the addition of 1 unit of trypsin or in other simulated gastric fluids.


After each of these treatments, PMPs are bought back to 20° C., neutralized to pH 7.4, and characterized using some or all of the methods described in Example 3.


Example 5. Loading PMPs with Polypeptide Cargo

This example describes methods of loading PMPs with polypeptides.


PMPs are produced as described in Example 1 and Example 2. To load polypeptides (e.g., proteins or peptides) into PMPs, PMPs are placed in solution with the polypeptide in phosphate-buffered saline (PBS). If the polypeptide is insoluble, the pH of the solution is adjusted until the polypeptide is soluble. If the polypeptide is still insoluble, the insoluble polypeptide is used. The solution is then sonicated to induce poration and diffusion into the PMPs according to the protocol from Wang et al., Nature Comm., 4: 1867, 2013. Alternatively, PMPs are electroporated according to the protocol from Wahlgren et al., Nucl. Acids. Res., 40(17), e130, 2012.


Alternatively, PMP lipids are isolated by adding 3.75 mL 2:1 (v/v) MeOH:CHCl3 to 1 mL of PMPs in PBS and vortexing the mixture. CHCl3 (1.25 mL) and ddH2O (1.25 mL) are added sequentially and vortexed. The mixture is then centrifuged at 2,000 r.p.m. for 10 min at 22° C. in glass tubes to separate the mixture into two phases (aqueous phase and organic phase). The organic phase sample containing the PMP lipids is dried by heating under nitrogen (2 psi). To produce polypeptide-loaded PMPs, the isolated PMP lipids are mixed with the polypeptide solution and passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015.


Alternatively, PMP lipids are isolated using methods that isolate additional plant lipid classes, including glycosylinositol phosphorylceramides (GIPCs), as described in Casas et al., Plant Physiology, 170: 367-384, 2016. Briefly, to extract PMP lipids including GIPCs, 3.5 mL of chloroform:methanol:HCl (200:100:1, v/v/v) plus 0.01% (w/v) of butylated hydroxytoluene, is added to and incubated with the PMPs. Next, 2 mL of 0.9% (w/v) NaCl is added and vortexed for 5 minutes. The sample is then centrifuged to induce the organic phase to aggregate at the bottom of the glass tube, and the organic phase is collected. The upper phase undergoes reextraction with 4 mL of pure chloroform to isolate lipids. The organic phases are combined and dried. After drying, the aqueous phase is resuspended with 1 mL of pure water and GIPCs are back-extracted using 1 mL of butanol-1 twice. To produce polypeptide-loaded PMPs, the isolated PMP lipid phases are mixed with the polypeptide solution and are passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015.


Alternatively, 3.5 mL of methyl tertiary-butyl ether (MTBE):methanol:water (100:30:25, v/v/v) plus 0.01% (w/v) butylated hydroxytoluene (BHT) is added to and incubated with the PMPs. After incubation, 2 mL of 0.9% NaCl is added, is vortexed for 5 minutes, and is centrifuged. The organic phase (upper) is collected and the aqueous phase (lower) is subjected to reextraction with 4 mL of pure MTBE. The organic phases are combined and dried. After drying, the aqueous phase is resuspend with 1 mL of pure water and GIPCs are back-extracted using 1 mL of butanol-1 twice. To produce protein-loaded PMPs, the isolated PMP lipid phases are mixed with the protein solution and passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015.


Alternatively, 3.5 mL of propan-2-ol:hexane:water (55:20:25, v/v/v) is incubated with the sample for 15 mins at 60° C. with occasional shaking. After incubation, samples are spun down at 500× g and the supernatant is transferred, and the process is repeated with 3.5 mL of the extraction solvent. Supernatants are combined and dried, followed by resuspension in 1 mL of pure water. GIPCs are then back-extracted with 1 mL of butanol-1 twice. GIPCs can be added to PMP lipids isolated via methods described in this example. To produce protein-loaded PMPs, the isolated PMP lipids are mixed with the protein solution and passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015.


Before use, the loaded PMPs are purified using the methods as described in Example 2 to remove polypeptides that are not bound to or encapsulated by the PMP. Loaded PMPs are characterized as described in Example 3, and their stability is tested as described in Example 4. To measure loading of the protein or peptide, the Pierce Quantitative Colorimetric Peptide Assay is used on a small sample of the loaded and unloaded PMPs, or using Western blot detection using protein-specific antibodies. Alternatively, proteins can be fluorescently labeled, and fluorescence can be used to determine the labeled protein concentration in loaded and unloaded PMPs.


Example 6: Treatment of Human Cells with Cre Recombinase Protein-Loaded PMPs

This example demonstrates loading of PMPs with a model protein with the purpose of delivering a functional protein into human cells. In this example, Cre recombinase is used as a model protein, and human embryonic kidney 293 cells (HEK293 cells) comprising a Cre reporter transgene (Hek293-LoxP-GFP-LoxP-RFP) (Puro; GenTarget, Inc.), are used as a model human cell line.


a) Production of Grapefruit PMPs Using TFF Combined with SEC


Red organic grapefruits were obtained from a local Whole Foods Market®. Two liters of grapefruit juice was collected using a juice press, and was subsequently centrifuged at 3000×g for 20 minutes, followed by 10,000×g for 40 minutes to remove large debris. PMPs were incubated in a final concentration of 50 mM EDTA (pH 7) for 30 minutes, and were subsequently passaged through a 1 μm and a 0.45 μm filter. Filtered juice was concentrated by tangential flow filtration (TFF) to 700 mL, washed with 500 mL of PBS, and concentrated to a final volume of 400 mL juice (total concentration 5×). Concentrated juice was dialyzed overnight in PBS using a 300 kDa dialysis membrane to remove contaminants. Subsequently, the dialyzed juice was further concentrated by TFF to a final concentration of 50 mL. Next, we used size exclusion chromatography to elute the PMP-containing fractions, and analyzed PMP size and concentration by nano-flow cytometry (NanoFCM) and protein concentration using a Pierce™ bicinchoninic acid (BCA) assay according to the manufacturer's instructions (FIGS. 1A and 1B). SEC fractions 8-12 contained contaminants. SEC fractions 4-6 contained purified PMPs and were pooled together, filter sterilized using 0.85 μm, 0.4 μm and 0.22 μm syringe filters, analyzed by NanoFCM (FIG. 1A) and used for loading Cre recombinase protein.


b) Loading of Cre Recombinase Protein into Grapefruit PMPs


Cre recombinase protein (ab134845) was obtained from Abcam, and was dissolved in UltraPure water to a final concentration of 0.5 mg/mL protein. Filter-sterilized PMPs were loaded with Cre recombinase protein by electroporation, using a protocol adapted from Rachael W. Sirianni and Bahareh Behkam (eds.), Targeted Drug Delivery: Methods and Protocols, Methods in Molecular Biology, vol. 1831. PMPs alone (PMP control), Cre recombinase protein alone (protein control), or PMP+Cre recombinase protein (protein-loaded PMPs) were mixed with 2× electroporation buffer (42% Optiprep™ (Sigma, D1556) in UltraPure water), see Table 5. Samples were transferred into a chilled cuvettes and electroporated at 0.400 kV, 125 μF (0.125 mF), resistance low 100Ω-high 600Ω with two pulses (4-10 ms) using a Biorad GenePulser. The reaction was put on ice for 10 minutes, and transferred to a pre-ice chilled 1.5 ml ultracentrifuge tube. All samples containing PMPs were washed 3 times by adding 1.4 ml ultrapure water, followed by ultracentrifugation (100,000 g for 1.5 h at 4° C.). The final pellet was resuspended in a minimal volume of UltraPure water (30-50 μL) and kept at 4° C. until use. After electroporation, samples containing Cre protein only were diluted in UltraPure water (as indicated in Table 5), and stored at 4° C. until use.









TABLE 5







Cre recombinase protein loading into grapefruit PMPs.
























Cre
Cre










recombinase
recombinase





(b)




treatment
treatment





Loading:




dose:
dose:




(a) PMP
Cre
(c)



Assuming
Assuming




loading:
recombinase
Loading:



100% loading
10% loading




PMPs
protein
Final



efficiency,
efficiency,




added to
(0.5 mg/mL)
volume of
PMP

Treatment:
maximum Cre
maximum Cre




electro-
added to
PMP
concen-
Treatment:
PMP
recombinase
recombinase



Input PMP
poration
electro-
formulation
tration
Amount of
treatment
protein
protein



concen-
reaction
poration
after
after
(c) added
concen-
concen-
concen-



tration
mixture
mixture
washing
loading
to cells
tration
tration
tration



(PMPs/mL)
(μL)
(μL)
(μL)
(PMPs/mL)
(μL)
(PMPs/mL)
(μg/mL)
(μg/mL)




















Cre-
3.37 × 1012
40
40
50
3.28 × 1011
10
2.63 × 1010
40.00
4.00


PMP


electro-


poration


Cre-
3.37 × 1012
20
20
54
2.92 × 1011
30
3.25 × 1010
55.56
5.56


PMP not


electro-


poration


(loading


control)


PMP
3.37 × 1012
10
0
48
5.49 × 1010
24
2.74 × 109 
0.00
0.00


only


electro-


poration


(PMP


only


control)


Cre
0.5 mg/mL

10
35

6

8.57


recombinase


electro-


poration


(protein


only


control)









c) Treatment of Hek293 LoxP-GFP-LoxP-RFP Cells with Cre-Recombinase-Loaded Grapefruit PMPs


The Hek293 LoxP-GFP-LoxP-RFP (Puro) human Cre-reporter cell line was purchased from GenTarget, Inc., and was maintained according to the manufacturer's instructions without antibiotic selection. Cells were seeded into a 96 well plate and were treated for 24 hrs in complete medium with Cre-recombinase-loaded PMPs (electroporated PMPs+Cre recombinase protein; 2.63×1010 PMPs/mL), electroporated PMPs (PMP only control; 2.74×109 PMPs/mL), electroporated Cre recombinase protein (protein only control; 8.57 μg/mL), or non-electroporated PMPs+Cre recombinase protein (loading control; 3.25×1010 PMPs/mL), as indicated in Table 5. After 24 hrs, cells were washed twice with Dulbecco's phosphate-buffered saline (DPBS), and fresh complete cell culture medium is added. 96-100 hrs post treatment, cells were imaged using an EVOS FL 2 fluorescence imaging system (Invitrogen). When Cre recombinase protein is functionally delivered into the cells and transported to the nucleus, GFP is recombined out, inducing a color switch in the cells from green to red (FIG. 2A). The presence of red fluorescent cells therefore indicates functional delivery of Cre recombinase protein by PMPs. FIG. 2B shows that recombined red fluorescent cells are observed only when cells are exposed to Cre-recombinase-loaded PMPs, while these are absent in the control treated Hek293 LoxP-GFP-LoxP-RFP cells. Our data shows that PMPs can be loaded with protein, and can functionally deliver protein cargo into human cells.


Example 7: Treatment of Diabetic Mice with Insulin-Loaded PMPs

This example describes loading of PMPs with a protein with the purpose of delivering the protein in vivo via oral and systemic administration. In this example, insulin is used as a model protein, and streptozotocin-induced diabetic mice are used as an in vivo model (FIG. 3). This example further shows that PMPs are stable throughout the gastrointestinal (GI) tract and are able to protect protein cargo.


Therapeutic Design:

The PMP solution is formulated to an effective insulin dose of 0, 0.001, 0.01, 0.1, 0.5, 1 mg/ml in PBS.


Experimental Protocol:

a) Loading of Lemon PMPs with Insulin Protein


PMPs are produced from lemon juice and other plant sources according to Example 1-2. Human recombinant insulin (Gibco) and labeled insulin-FITC (Sigma Aldrich 13661) are solubilized at a concentration of 3 mg/ml in 10 mM HCl, pH 3. PMPs are placed in solution with the protein in PBS. If the protein is insoluble, pH is adjusted until it is soluble. If the protein is still insoluble, the insoluble protein is used. The solution is then sonicated to induce poration and diffusion into the PMP according to the protocol from Wang et al., Nature Comm., 4: 1867, 2013. Alternatively, the solution can be passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015. Alternatively, PMPs can be electroporated according to the protocol from Wahlgren et al., Nucl. Acids. Res., 40(17), e130, 2012.


To produce protein-loaded PMPs, insulin or FITC-insulin can alternatively be loaded by mixing PMP-isolated lipids with the protein, and resealing using extrusion or sonication as described in Example 5. In brief, solubilized PMP lipids are mixed with a solution of insulin protein (pH 3, 10 mM HCl), sonicated for 20 minutes at 40° C., and extruded using polycarbonate membranes. Alternatively, insulin protein can be precomplexed prior to PMP lipid mixing with protamine sulfate (Sigma, P3369) in a 5:1 ratio, to facilitate encapsulation.


Insulin-loaded PMPs are purified by spinning down (100,000×g for 1 hour at 4° C.) and washing the pellet 2 times with acidic water (pH 4), followed by one wash with PBS (pH 7.4) to remove un-encapsulated protein in the supernatant. Alternatively, other purification methods can be used as described in Example 2. The final pellet is resuspended in a minimal volume of PBS (30-50 μL) and stored at 4° C. until use. Insulin-loaded PMPs are characterized as described in Example 3, and their stability is tested as described in Example 4.


Insulin encapsulation of PMPs is measured by HPLC, Western blot (anti-insulin antibody, Abcam ab181547) or by human insulin ELISA (Abcam, ab100578). FITC-insulin-loaded PMPs can alternatively be analyzed by fluorescence (Ex/Em 490/525). Pierce MicroBCA™ analysis (Thermo Scientific™) can be used to determine total protein concentration before and after loading. The Loading Efficacy (%) is determined by dividing the incorporated insulin (ug) by the total amount of insulin (ug) added to the reaction. PMP loading capacity is determined by dividing the amount of incorporated insulin (ug) by the number of labeled PMPs (in case of FITC-insulin) or PMPs (unlabeled insulin).


b) Gastro-Intestinal Stability of Insulin-FITC Loaded Lemon PMPs In Vitro


To determine the stability of PMPs in the GI tract, and the ability of PMPs to protect protein cargo from degradation, insulin-FITC-loaded PMPs are subjected to fasted and fed GI stomach and intestinal fluid mimetics purchased from Biorelevant (UK), which are prepared according to the manufacturer's instruction: FaSSIF (Fasted, small intestine, pH 6.5), FeSSIF (Fed, small intestine, pH 5, supplemented with pancreatin), FaSSGF (Fasted, stomach, pH 1.6), FaSSIF-V2 (Fasted, small intestine, pH 6.5), FeSSIF-V2 (Fed, small intestine, with digestive components, pH 5.8).


Twenty μl of insulin-FITC-loaded PMPs with an effective dose of 0 (PMP only control), 0.001, 0.01, 0.1, 0.5, 1 mg/ml Insulin-FITC, or free 0 (PBS control), 0.001, 0.01, 0.1, 0.5, 1 mg/ml Insulin-FITC are incubated with I mL of stomach, fed, and fasted intestinal juices (FaSSIF, F2SSIF, FaSSGF, FaSSIF-V2 and FeSSIF-V2), PMS (negative control), and PBS+0.1% SDS (PMP degradation control) for 1, 2, 3, 4, and 6 hours at 37° C. Alternatively, insulin-FITC-loaded PMPs or free protein are subsequently exposed to F2SSIF>FASSIF-V2 or F2SSIF>FESSIF-V2 for 1, 2, 3, 4, and 6 hours at 37° C. for each step. Next, Insulin-FITC-loaded PMPs are pelleted by ultracentrifugation at 100,000×g for 1 h at 4° C. Pellets are resuspended in 25-50 mM Tris pH 8.6, and analyzed for fluorescence intensity (Ex/Em 490/525), FITC+PMP concentration, PMP size, and insulin protein concentration. PMP supernatants after pelleting, and insulin-FITC protein only samples are analyzed by fluorescence intensity after adjusting the pH of the solutions to pH 8-9 (bicarbonate buffer), the presence of particles in the solution and their size is measured, and after precipitation, insulin protein concentration is determined by Western blot. To show that PMPs are stable throughout the GI tract and that their protein cargo is protected from degradation, total fluorescence (spectrophotometer), total insulin protein (Western), PMP size and fluorescent PMP concentration (NanoFCM) of Insulin-FITC-labeled PMPs and free Insulin-FITC protein are compared between the different GI juice mimetics and the PBS control. Insulin-FITC-labeled PMPs are stable when fluorescent PMPs and Insulin-FITC protein can be detected after GI juice exposure, compare to PBS incubation.


c) Treatment of Diabetic Mice with Insulin-Loaded PMPs Via Oral Administration


To show the ability of PMPs to deliver functional protein in vivo, PMPs are loaded with human recombinant insulin using the methods described in Example 7a. PMPs are labeled with DyLight-800 (DL800) infrared membrane dye (Invitrogen). Briefly, DyLight800 is dissolved in DMSO to a final concentration of 10 mg/mL and 200 μL of PMPs (1-3×1012 PMPs/mL) are mixed with 5 μL dye and are incubated for 1 h at room temperature on a shaker. Labeled PMPs are washed 2-3 times by ultracentrifuge at 100,000×g for 1 hr at 4° C., and pellets are resuspended with 1.5 ml UltraPure water. The final DyLight800 labeled pellets are resuspended in a minimal amount of UltraPure PBS and are characterized using methods described herein.


Mouse experiments are performed at a contract research organization, using a well-established streptozotocin (STZ)-induced diabetic mouse model, and mice are treated and monitored according to standard procedures. In short, eight week old streptozotocin (STZ)-induced diabetic male C57BL/6J mice are orally gavaged with 300 μl insulin-loaded PMPs with an effective dose of 0 (PMP only control), 0.01, 0.1, 0.5, 1 mg/mL insulin, or free 0 (PBS control), 0.1, 0.5, 1 mg/mL insulin (5 mice per group). Blood glucose levels of the mice are monitored after 2, 4, 6, 12 and 24 hours, and at the end point, blood samples are collected for ELISA to determine human insulin levels in the mouse. PMPs can effectively deliver insulin orally when blood glucose levels are induced, when compared to free insulin, unloaded PMPs or PBS. The biodistribution of the PMPs is determined by isolating mouse organs and tissues at the experimental endpoint and measuring infrared fluorescence at 800 nm using a Licor Odyssey imager.


d) Treatment of Diabetic Mice with Insulin-Loaded PMPs Via IV Administration


To show the ability of PMPs to deliver functional protein in vivo, PMPs are loaded with human recombinant insulin using methods described in Example 7a. PMPs are labeled with DyLight-800 (DL800) infrared membrane dye (Invitrogen). Briefly, DyLight800 is dissolved in DMSO to a final concentration of 10 mg/mL and 200 μL of PMPs (1-3×1012 PMPs/mL) are mixed with 5 μL dye and are incubated for 1 h at room temperature on a shaker. Labeled PMPs are washed 2-3 times by ultracentrifuge at 100,000×g for 1 hr at 4° C., and pellets are resuspended with 1.5 ml UltraPure water. The final DyLight800 labeled pellets are resuspended in a minimal amount of UltraPure PBS and are characterized using methods described herein.


Mouse experiments are performed at a contract research organization, using a well-established streptozotocin (STZ)-induced diabetic mouse model, and mice are treated and monitored according to standard procedures. In short, eight week old streptozotocin (STZ)-induced diabetic male C57BL/6J mice are systemically administered insulin-PMPs by tail vein injection with an effective dose of 0 (PMP only control), 0.01, 0.1, 0.5, 1 mg/ml Insulin, PBS (negative control), or 10-20 mg/kg free insulin (positive control) (5 mice per group). Blood glucose levels of the mice are monitored after 2, 4, 6, 12 and 24 hours, and at the end point, blood samples are collected for ELISA to determine human insulin levels in the mouse. PMPs can effectively deliver insulin systemically when blood glucose levels are induced, when compared unloaded PMPs and PBS. The biodistribution of the PMPs is determined by isolating mouse organs and tissues at the experimental endpoint, and measuring infrared fluorescence at 800 nm using a Licor Odyssey imager.


e) Treatment of Diabetic Mice with Insulin-Loaded PMPs Via IP Administration


To show the ability of PMPs to deliver functional protein in vivo, PMPs are loaded with human recombinant insulin using methods described in Example 7a. PMPs are labeled with DyLight-800 (DL800) infrared membrane dye (Invitrogen). Briefly, DyLight800 is dissolved in DMSO to a final concentration of 10 mg/mL and 200 μL of PMPs (1-3×1012 PMPs/mL) are mixed with 5 μL dye and are incubated for 1 h at room temperature on a shaker. Labeled PMPs are washed 2-3 times by ultracentrifuge at 100,000×g for 1 hr at 4° C., and pellets are resuspended with 1.5 ml UltraPure water. The final DyLight800 labeled pellets are resuspended in a minimal amount of UltraPure PBS and are characterized using methods described herein.


Mouse experiments are performed at a contract research organization, using a well-established streptozotocin (STZ)-induced diabetic mouse model, and mice are treated and monitored according to standard procedures. In short, eight week old streptozotocin (STZ)-induced diabetic male C57BL/6J mice, are administered insulin-PMPs by intraperitoneal (IP) injection with an effective dose of 0 (PMP only control), 0.01, 0.1, 0.5, 1 mg/ml insulin, PBS (negative control), or 10-20 mg/kg free insulin (positive control) (5 mice per group). Blood glucose levels of the mice are monitored after 2, 4, 6, 12 and 24 hours, and at the end point, blood samples are collected for ELISA to determine human insulin levels in the mouse. PMPs can effectively deliver insulin systemically when blood glucose levels are induced, when compared unloaded PMPs and PBS. The biodistribution of the PMPs is determined by isolating mouse organs and tissues at the experimental endpoint and measuring infrared fluorescence at 800 nm, using a Licor Odyssey imager.


Example 8: Treatment of Human, Bacterial, Fungal, Plant, and Nematode Cells with Protein-Loaded Plant Messenger Packs

A. Treatment of Human Cells with Protein-Loaded PMPs


This example describes loading of PMPs with a protein for the purpose of delivering a protein cargo to enhance or reduce fitness in mammalian cells. This example describes PMPs loaded with GFP that are taken up by human cells, and it further describes that protein-loaded PMPs are stable and retain their activity over a range of processing and environmental conditions. In this example, GFP is used as a model protein or polypeptide, and A549 lung cancer cells are used as model human cell line.


Therapeutic Dose:

PMPs loaded with GFP, formulated in water to a concentration that delivers 0 (unloaded PMP control), 0.01, 0.1, 1, 5, 10, or 100 μg/ml GFP protein-loaded in PMPs.


Experimental Protocol:

a) Loading of Lemon PMPs with GFP Protein


PMPs are produced from lemon juice and other plant sources according to Example 1. Green fluorescent protein is synthesized commercially (Abcam) and solubilized in PBS. PMPs are placed in solution with the protein in PBS. If the protein is insoluble, pH is adjusted until it is soluble. If the protein is still insoluble, the insoluble protein is used. The solution is then sonicated to induce poration and diffusion into the PMP according to the protocol from Wang et al., Nature Comm., 4: 1867, 2013. Alternatively, the solution can be passed through a lipid extruder according to the protocol from Haney et al., J Control Release, 207: 18-30, 2015. Alternatively, PMPs can be electroporated according to the protocol from Wahlgren et al., Nucl. Acids. Res., 40(17), e130, 2012.


To produce protein-loaded PMPs, GFP can alternatively be loaded by mixing PMP-isolated lipids with the protein, and resealing using extrusion or sonication as described in Example 5. In brief, solubilized PMP lipids are mixed with a solution of GFP protein (pH 5-6, in PBS), sonicated for 20 minutes at 40° C., and extruded using polycarbonate membranes. Alternatively, GFP protein can be precomplexed prior to PMP lipid mixing with protamine (Sigma) in a 10:1 ratio to facilitate encapsulation.


GFP-loaded PMPs are purified by spinning down (100,000×g for 1 hour at 4° C.) and washing the pellet three times to remove un-encapsulated protein in the supernatant, or by using other methods as described in Example 2. GFP-loaded PMPs are characterized as described in Example 3, and their stability is tested as described in Example 4. GFP encapsulation of PMPs is measured by Western blot or fluorescence.


b) Treatment of Human A549 Cells with GFP-Loaded Lemon PMPs


A549 lung cancer cells were purchased from the ATCC (CCL-185) and maintained in F12K medium supplemented with 10% FBS according to the manufacturer's instructions. To determine GFP-loaded PMP uptake by human cells, A549 cells are plated in a 48 well plate at a concentration of 1E5 cells/well, and cells are allowed to adhere for at least 6 hours at 37° C. or overnight. Next, medium is aspirated and cells are incubated with 0 (unloaded PMP control), 0.01, 0.1, 1, 5, 10, or 100 μg/ml GFP-loaded lemon-derived PMPs, or unloaded 0 (negative control), 0.01, 0.1, 1, 5, 10, or 100 μg/ml GFP protein in complete medium. After incubation of 2, 6, 12 and 24 hours at 37° C., the medium is aspirated and cells are gently washed 3 times for 5 minutes with DPBS or complete medium. Optionally, if tolerated, A549 cells are incubated with 0.5% triton X100 with/without ProtK (2 mg/mL) for 10 minutes at 37° C. to burst and degrade PMPs and protein that are not taken up by the cells. Next, images are acquired on a high-resolution fluorescence microscope. Uptake of GFP-loaded PMPs or GFP protein alone by A549 is demonstrated when the cytoplasm of the cell turns green. The percentage of GFP-loaded PMP treated cells with a green cytoplasm compared to control treatments with PBS and GFP only are recorded to determine uptake. In addition, GFP uptake by cells is measured by Western blot using an anti-GFP antibody (Abcam), after total protein isolation in treated and untreated cells, using standard methods. GFP protein levels are recorded and compared between cells treated with GFP-loaded PMPs, GFP protein alone, and untreated cells to determine uptake.


B. Treatment of Bacteria with Protein-Loaded PMPs


This example describes loading of PMPs with a protein for the purpose of delivering a protein cargo to enhance or reduce fitness in bacteria. This example describes PMPs loaded with GFP that are taken up by bacteria, and it further describes that protein-loaded PMPs are stable and retain their activity over a range of processing and environmental conditions. In this example, GFP is used as a model protein or peptide, and E. coli are used as a model bacterium.


Therapeutic Dose:

PMPs loaded with GFP are formulated as described in Example 8A.


Experimental Protocol:

a) Loading of Lemon PMPs with GFP Protein


PMPs are produced as described in Example 8A.


b) Delivery of GFP-Loaded Lemon PMPs to E. coli



E. coli are acquired from ATCC (#25922) and grown on Trypticase Soy Agar/broth at 37° C. according to the manufacturer's instructions. To determine the GFP-loaded PMP uptake by E. coli, 10 uL of a 1 mL overnight bacterial suspension is incubated with 0 (unloaded PMP control), 0.01, 0.1, 1, 5, 10, 100 μg/mL GFP-loaded lemon-derived PMPs, or unloaded 0 (negative control), 0.01, 0.1, 1, 5, 10, 100 μg/mL GFP protein in liquid culture. After incubation of 5 min, 30 min and 1 h at room temperature, bacteria are washed 4 times with 0.5% triton X100, and optional ProtK treatment (2 mg/ml ProtK, 10 minutes at 37° C.; if tolerated by the bacteria) to burst and degrade PMPs and protein that are not taken up by the bacteria. Next, images are acquired on a high-resolution fluorescence microscope. Uptake of GFP-loaded PMPs or GFP protein alone by bacteria is demonstrated when the cytoplasm of the bacteria turns green. The percentage of GFP-loaded PMP treated bacteria with a green cytoplasm compared to control treatments with PBS and GFP only are recorded to determine uptake. In addition, GFP uptake by bacteria is measured by Western blot using an anti-GFP antibody (Abcam), after total protein isolation in treated and untreated bacteria, using standard methods. GFP protein levels are recorded and compared between bacteria treated with GFP-loaded PMPs, GFP protein alone, and untreated bacteria to determine uptake.


B. Treatment of Fungi with Protein-Loaded PMPs


This example describes loading of PMPs with a protein for the purpose of delivering a protein cargo to enhance or reduce fitness in fungi. This example describes PMPs loaded with GFP that are taken up by fungi (including yeast), and it further describes that protein-loaded PMPs are stable and retain their activity over a range of processing and environmental conditions. In this example, GFP is used as a model peptide and protein, and Saccharomyces cerevisiae is used as a model fungus.


Therapeutic Dose:

PMPs loaded with GFP are formulated as described in Example 8A.


Experimental Protocol:

a) Loading of Lemon PMPs with GFP Protein


PMPs are produced as described in Example 8A.


b) Delivery of GFP-Loaded Lemon PMPs to Saccharomyces cerevisiae



Saccharomyces cerevisiae is obtained from the ATCC (#9763) and maintained at 30° C. in yeast extract peptone dextrose broth (YPD) as indicated by the manufacturer. To determine the PMP uptake by S. cerevisiae, yeast cells are grown to an OD600 of 0.4-0.6 in selection media, and incubated with 0 (unloaded PMP control), 0.01, 0.1, 1, 5, 10, 100 μg/ml GFP-loaded lemon-derived PMPs, or unloaded 0 (negative control), 0.01, 0.1, 1, 5, 10, 100 μg/ml GFP protein, in liquid culture. After incubation of 5 min, 30 min and 1 h at room temperature, yeast cells are washed 4 times with 0.5% triton X100, and optional ProtK treatment (2 mg/ml ProtK, 10 minutes at 37° C.; if tolerated by the cells) to burst and degrade PMPs and protein that are not taken up by the bacteria. Next, images are acquired on a high-resolution fluorescence microscope. Uptake of GFP-loaded PMPs or GFP protein alone by yeast is demonstrated when the cytoplasm of the yeast cell turns green. The percentage of GFP-loaded PMP treated yeast with a green cytoplasm compared to control treatments with PBS and GFP only are recorded to determine uptake. In addition, GFP uptake by yeast is measured by Western blot using an anti-GFP antibody (Abcam), after total protein isolation in treated and untreated yeast, using standard methods. GFP protein levels are recorded and compared between yeast treated with GFP-loaded PMPs, GFP protein alone, and untreated yeast to determine uptake.


C. Treatment of a Plant with Protein-Loaded PMPs


This example describes loading of PMPs with a protein for the purpose of delivering a protein cargo to enhance or reduce fitness in plants. This example describes PMPs loaded with GFP that are taken up by plants, and it further describes that protein-loaded PMPs are stable and retain their activity over a range of processing and environmental conditions. In this example, GFP is used as a model protein and peptide, and Arabidopsis thaliana seedlings are used as model plant.


Therapeutic Dose:

PMPs loaded with GFP are formulated as described in Example 8A.


Experimental Protocol:

a) Loading of Lemon PMPs with GFP Protein


PMPs are produced as described in Example 8A.


b) Delivery of GFP-Loaded PMPs to Arabidopsis thaliana Seedlings


Wild-type Columbia (Col)-1 ecotype Arabidopsis thaliana is obtained from the Arabidopsis Biological Resource Center (ABRC). Seeds are surface sterilized with a solution containing 70% (v/v) ethanol and 0.05% (v/v) Triton X-100, and are germinated on sterile plates in liquid medium containing half-strength Murashige and Skoog (MS), supplemented with 0.5% sucrose and 2.5 mM MES, pH 5.6. Three day old seedlings are treated with 0 (unloaded PMP control), 0.01, 0.1, 1, 5, 10, 100 μg/ml GFP-loaded lemon-derived PMPs, or unloaded 0 (negative control), 0.01, 0.1, 1, 5, 10, 100 μg/ml GFP protein, added to the MS medium for 6, 12, 24 and 48 hours. After treatment, seedlings are extensively washed in MS medium, optionally supplemented with 0.5% Triton X100, followed by ProtK treatment (2 mg/mL ProtK, 10 minutes at 37° C.; if tolerated by the seedlings) to burst and degrade PMPs and protein that are not taken up by the plant. Next, images are acquired on a high-resolution fluorescence microscope to detect GFP in the roots, leaves and other plant parts. GFP-loaded PMPs or GFP protein alone is taken up by seedlings when GFP protein localization can be detected in plant tissues. The number of seedlings with green fluorescence is compared between GFP-loaded PMPs and control treatments with PBS and GFP only to determine uptake. In addition, GFP uptake by seedlings can be quantified by Western blot using an anti-GFP antibody (Abcam), after total protein isolation in treated and untreated seedlings, using standard methods. GFP protein levels are recorded and compared between seedlings treated with GFP-loaded PMPs, GFP protein alone, and untreated seedlings to determine uptake.


D. Treatment of a Nematode with Protein-Loaded PMPs


This example describes loading of PMPs with a protein for the purpose of delivering a protein cargo to enhance or reduce fitness in nematodes. This example describes PMPs loaded with GFP that are taken up by nematodes, and it further describes that protein-loaded PMPs are stable and retain their activity over a range of processing and environmental conditions. In this example, GFP is used as a model peptide, and C. elegans is used as a model nematode.


Therapeutic Dose:

PMPs loaded with GFP are formulated as described in Example 8A.


Experimental Protocol:

a) Loading of Lemon PMPs with GFP Protein


PMPs are produced as described in Example 8A.


b) Delivery of GFP-Loaded PMPs to C. elegans



C. elegans wild-type N2 Bristol strain (C. elegans Genomics Center) are maintained on an Escherichia coli (strain OP50) lawn on nematode growth medium (NGM) agar plates (3 g/l NaCl, 17 g/l agar, 2.5 g/l peptone, 5 mg/l cholesterol, 25 mM KH2PO4 (pH 6.0), 1 mM CaCl2), 1 mM MgSO4) at 20° C., from L1 until the L4 stage.


One-day old C. elegans are transferred to a new plate and are fed 0 (unloaded PMP control), 0.01, 0.1, 1, 5, 10, 100 μg/ml GFP-loaded lemon-derived PMPs, or unloaded 0 (negative control), 0.01, 0.1, 1, 5, 10, 100 μg/ml GFP protein in a liquid solution following the feeding protocol in Conte et al., Curr. Protoc. Mol. Bio., 109: 26.3.1-26.330, 2015. Worms are next examined for GFP-loaded PMP uptake in the digestive tract by using a fluorescent microscope for green fluorescence, compared to unloaded PMP-treatment, or GFP protein alone and a sterile water control. In addition, GFP uptake by C. elegans can be quantified by Western blot using an anti-GFP antibody (Abcam), after total protein isolation in treated and untreated nematodes, using standard methods. GFP protein levels are recorded and compared between nematodes treated with GFP-loaded PMPs, GFP protein alone, and untreated C. elegans to determine uptake.


E. In Vivo Delivery of Cre Recombinase to a Mouse


This example describes loading of PMPs with a protein with the purpose of delivering the protein in vivo via oral and systemic administration. In this example, Cre recombinase is used as a model protein, and mice having a luciferase Cre reporter construct (Lox-STOP-Lox-LUC) are used as an in vivo model (FIG. 4).


Delivery of a Cre recombinase to a mouse, as outlined in FIG. 4, may be performed using any of the methods described herein. Expression of luciferase in a mouse tissue indicates that Cre has been delivered by PMPs to the tissue.


Example 9: PMP Production from Blended Fruit Juice Using Ultracentrifugation and Sucrose Gradient Purification

This example demonstrates that PMPs can be produced from fruit by blending the fruit and using a combination of sequential centrifugation to remove debris, ultracentrifugation to pellet crude PMPs, and using a sucrose density gradient to purify PMPs. In this example, grapefruit was used as a model fruit.


a) Production of Grapefruit PMPs by Ultracentrifugation and Sucrose Density Gradient Purification


A workflow for grapefruit PMP production using a blender, ultracentrifugation and sucrose gradient purification is shown in FIG. 5A. One red grapefruit was purchased from a local Whole Foods Market®, and the albedo, flavedo, and segment membranes were removed to collect juice sacs, which were homogenized using a blender at maximum speed for 10 minutes. One hundred mL juice was diluted 5× with PBS, followed by subsequent centrifugation at 1000×g for 10 minutes, 3000× g for 20 minutes, and 10,000× g for 40 minutes to remove large debris. 28 mL of cleared juice was ultracentrifuged on a Sorvall™ MX 120 Plus Micro-Ultracentrifuge at 150,000× g for 90 minutes at 4° C. using a S50-ST (4×7 mL) swing bucket rotor to obtain a crude PMP pellet which was resuspended in PBS pH 7.4. Next, a sucrose gradient was prepared in Tris-HCL pH7.2, crude PMPs were layered on top of the sucrose gradient (from top to bottom: 8, 15. 30. 45 and 60% sucrose), and spun down by ultracentrifugation at 150,000×g for 120 minutes at 4° C. using a S50-ST (4×7 mL) swing bucket rotor. One mL fractions were collected and PMPs were isolated at the 30-45% interface. The fractions were washed with PBS by ultracentrifugation at 150,000×g for 120 minutes at 4° C. and pellets were dissolved in a minimal amount of PBS.


PMP concentration (1×109 PMPs/mL) and median PMP size (121.8 nm) were determined using a Spectradyne nCS1™ particle analyzer, using a TS-400 cartridge (FIG. 5B). The zeta potential was determined using a Malvern Zetasizer Ultra and was −11.5+/−0.357 mV.


This example demonstrates that grapefruit PMPs can be isolated using ultracentrifugation combined with sucrose gradient purification methods. However, this method induced severe gelling of the samples at all PMP production steps and in the final PMP solution.


Example 10: PMP Production from Mesh-Pressed Fruit Juice Using Ultracentrifugation and Sucrose Gradient Purification

This example demonstrates that cell wall and cell membrane contaminants can be reduced during the PMP production process by using a milder juicing process (mesh strainer). In this example, grapefruit was used as a model fruit.


a) Mild Juicing Reduces Gelling During PMP Production from Grapefruit PMPs


Juice sacs were isolated from a red grapefruit as described in Example 9. To reduce gelling during PMP production, instead of using a destructive blending method, juice sacs were gently pressed against a tea strainer mesh to collect the juice and to reduce cell wall and cell membrane contaminants. After differential centrifugation, the juice was more clear than after using a blender, and one clean PMP-containing sucrose band at the 30-45% intersection was observed after sucrose density gradient centrifugation (FIG. 6). There was overall less gelling during and after PMP production.


Our data shows that use of a mild juicing step reduces gelling caused by contaminants during PMP production when compared to a method comprising blending.


Example 11: PMP Production Using Ultracentrifugation and Size Exclusion Chromatography

This example describes the production of PMPs from fruits by using Ultracentrifugation (UC) and Size Exclusion Chromatography (SEC). In this example, grapefruit is used as a model fruit.


a) Production of Grapefruit PMPs Using UC and SEC


Juice sacs were isolated from a red grapefruit, as described in Example 9a, and were gently pressed against a tea strainer mesh to collect 28 ml juice. The workflow for grapefruit PMP production using UC and SEC is depicted in FIG. 7A. Briefly, juice was subjected to differential centrifugation at 1000×g for 10 minutes, 3000× g for 20 minutes, and 10,000× g for 40 minutes to remove large debris. 28 ml of cleared juice was ultracentrifuged on a Sorvall™ MX 120 Plus Micro-Ultracentrifuge at 100,000× g for 60 minutes at 4° C. using a S50-ST (4×7 mL) swing bucket rotor to obtain a crude PMP pellet which was resuspended in MES buffer (20 mM MES, NaCl, pH 6). After washing the pellets twice with MES buffer, the final pellet was resuspended in 1 ml PBS, pH 7.4. Next, we used size exclusion chromatography to elute the PMP-containing fractions. SEC elution fractions were analyzed by nano-flow cytometry using a NanoFCM to determine PMP size and concentration using concentration and size standards provided by the manufacturer. In addition, absorbance at 280 nm (SpectraMax®) and protein concentration (Pierce™ BCA assay, ThermoFisher) were determined on SEC fractions to identify in which fractions PMPs are eluted (FIGS. 7B-7D). SEC fractions 2-4 were identified as the PMP-containing fractions. Analysis of earlier- and later-eluting fractions indicated that SEC fraction 3 is the main PMP-containing fraction, with a concentration of 2.83×1011 PMPs/mL (57.2% of all particles in the 50-120 nm size range), with a median size of 83.6 nm+/−14.2 nm (SD). While the late elution fractions 8-13 had a very low concentration of particles as shown by NanoFCM, protein contaminants were detected in these fractions by BCA analysis.


Our data shows that TFF and SEC can be used to isolate purified PMPs from late-eluting contaminants, and that a combination of the analysis methods used here can identify PMP fractions from late-eluting contaminants.


Example 12: Scaled PMP Production Using Tangential Flow Filtration and Size Exclusion Chromatography Combined with EDTA/Dialysis to Reduce Contaminants

This example describes the scaled production of PMPs from fruits by using Tangential Flow Filtration (TFF) and Size Exclusion Chromatography (SEC), combined with an EDTA incubation to reduce the formation of pectin macromolecules, and overnight dialysis to reduce contaminants. In this example, grapefruit is used as a model fruit.


a) Production of Grapefruit PMPs Using TFF and SEC


Red grapefruits were obtained from a local Whole Foods Market®, and 1000 ml juice was isolated using a juice press. The workflow for grapefruit PMP production using TFF and SEC is depicted in FIG. 8A. Juice was subjected to differential centrifugation at 1000×g for 10 minutes, 3000× g for 20 minutes, and 10,000× g for 40 minutes to remove large debris. Cleared grapefruit juice was concentrated and washed once using a TFF (5 nm pore size) to 2 mL (100×). Next, we used size exclusion chromatography to elute the PMP-containing fractions. SEC elution fractions were analyzed by nano-flow cytometry using a NanoFCM to determine PMP concentration using concentration and size standards provided by the manufacturer. In addition, protein concentration (Pierce™ BCA assay, ThermoFisher) was determined for SEC fractions to identify the fractions in which PMPs are eluted. The scaled production from 1 liter of juice (100× concentrated) also concentrated a high amount of contaminants in the late SEC fractions as can be detected by BCA assay (FIG. 8B, top panel). The overall total PMP yield (FIG. 8B, bottom panel) was lower in the scaled production when compared to single grapefruit isolations, which may indicate loss of PMPs.


b) Reducing Contaminants by EDTA Incubation and Dialysis


Red grapefruits were obtained from a local Whole Foods Market®, and 800 ml juice was isolated using a juice press. Juice was subjected to differential centrifugation at 1000×g for 10 minutes, 3000× g for 20 minutes, and 10,000× g for 40 minutes to remove large debris, and filtered through a 1 μm and 0.45 μm filter to remove large particles. Cleared grapefruit juice was split into 4 different treatment groups containing 125 ml juice each. Treatment Group 1 was processed as described in Example 4a, concentrated and washed (PBS) to a final concentration of 63×, and subjected to SEC. Prior to TFF, 475 ml juice was incubated with a final concentration of 50 mM EDTA, pH 7.15 for 1.5 hrs at RT to chelate iron and reduce the formation of pectin macromolecules. Afterwards, juice was split in three treatment groups that underwent TFF concentration with either a PBS (without calcium/magnesium) pH 7.4, MES pH 6, or Tris pH 8.6 wash to a final juice concentration of 63×. Next, samples were dialyzed in the same wash buffer overnight at 4° C. using a 300 kDa membrane and subjected to SEC. Compared to the high contaminant peak in the late elution fractions of the TFF only control, EDTA incubation followed by overnight dialysis strongly reduced contaminants, as shown by absorbance at 280 nm (FIG. 8C) and BCA protein analysis (FIG. 8D), which is sensitive to the presence of sugars and pectins. There was no difference in the dialysis buffers used (PBS without calcium/magnesium pH 7.4, MES pH 6, Tris pH 8.6).


Our data indicates that incubation with EDTA followed by dialysis reduces the amount of co-purified contaminants, facilitating scaled PMP production.


Example 13: PMP Production from Plant Cell Culture Medium

This example demonstrates that PMPs can be produced from plant cell culture. In this example, the Zea mays Black Mexican Sweet (BMS) cell line is used as a model plant cell line.


a) Production of Zea mays BMS Cell Line PMPs


The Zea mays Black Mexican sweet (BMS) cell line was purchased from the ABRC and was grown in Murashige and Skoog basal medium pH 5.8, containing 4.3 g/L Murashige and Skoog Basal Salt Mixture (Sigma M5524), 2% sucrose (S0389, Millipore Sigma), 1× MS vitamin solution (M3900, Millipore Sigma), 2 mg/L 2,4-dichlorophenoxyacetic acid (D7299, Millipore Sigma) and 250 ug/L thiamine HCL (V-014, Millipore Sigma), at 24° C. with agitation (110 rpm), and was passaged 20% volume/volume every 7 days.


Three days after passaging, 160 ml BMS cells was collected and spun down at 500× g for 5 min to remove cells, and 10,000×g for 40 min to remove large debris. Medium was passed through a 0.45 μm filter to remove large particles, and filtered medium was concentrated and washed (100 ml MES buffer, 20 mM MES, 100 mM NaCL, pH 6) by TFF (5 nm pore size) to 4 mL (40×). Next, we used size exclusion chromatography to elute the PMP-containing fractions, which were analyzed by NanoFCM for PMP concentration, by absorbance at 280 nm (SpectraMax®), and by a protein concentration assay (Pierce™ BCA assay, ThermoFisher) to verify the PMP-containing fractions and late fractions containing contaminants (FIGS. 9A-9C). SEC fractions 4-6 contained purified PMPs (fractions 9-13 contained contaminants), and were pooled together. The final PMP concentration (2.84×1010 PMPs/ml) and median PMP size (63.2 nm+/−12.3 nm SD) in the combined PMP containing fractions were determined by NanoFCM, using concentration and size standards provided by the manufacturer (FIGS. 9D-9E).


These data show that PMPs can be isolated, purified, and concentrated from plant liquid culture media.


Example 14: Treatment of a Microbe with Protein Loaded PMPs

This example demonstrates that PMPs can be exogenously loaded with a protein, PMPs can protect their cargo from degradation, and PMPs can deliver their functional cargo to an organism. In this example, grapefruit PMPs are used as model PMP, Pseudomonas aeruginosa bacteria is used as a model organism, and luciferase protein is used as a model protein.


While protein and peptide-based drugs have great potential to impact the fitness of a wide variety pathogenic bacteria and fungi that are resistant or hard to treat, their deployment has been unsuccessful due to their instability and formulation challenges.


a) Production of Grapefruit PMPs Using TFF Combined with SEC


Red organic grapefruits were obtained from a local Whole Foods Market®. Four liters of grapefruit juice were collected using a juice press, pH adjusted to pH4 with NaOH, incubated with 1 U/ml pectinase (Sigma, 17389) to remove pectin contaminants, and subsequently centrifuged at 3,000 g for 20 minutes, followed by 10,000 g for 40 minutes to remove large debris. Next, the processed juice was incubated with 500 mM EDTA pH8.6, to a final concentration of 50 mM EDTA, pH7.7 for 30 minutes to chelate calcium and prevent the formation of pectin macromolecules. Subsequently, the EDTA-treated juice was passaged through an 11 m, 1 m and 0.45 m filter to remove large particles. Filtered juice was washed and concentrated by Tangential Flow Filtration (TFF) using a 300 kDa TFF. Juice was concentrated 5×, followed by a 6 volume exchange wash with PBS, and further filtrated to a final concentration 198 mL (20×). Next, we used size exclusion chromatography to elute the PMP-containing fractions, which were analyzed by absorbance at 280 nm (SpectraMax®) and protein concentration (Pierce™ BCA assay, ThermoFisher) to verify the PMP-containing fractions and late fractions containing contaminants. SEC fractions 3-7 contained purified PMPs (fractions 9-12 contained contaminants), were pooled together, were filter sterilized by sequential filtration using 0.8 m, 0.45 m and 0.22 m syringe filters, and were concentrated further by pelleting PMPs for 1.5 hrs at 40,000× g and resuspending the pellet in 4 ml UltraPure™ DNase/RNase-Free Distilled Water (ThermoFisher, 10977023). Final PMP concentration (7.56×1012 PMPs/ml) and average PMP size (70.3 nm+/−12.4 nm SD) were determined by NanoFCM, using concentration and size standards provided by the manufacturer.


b) Loading of Luciferase Protein into Grapefruit PMPs


Grapefruit PMPs were produced as described in Example 14a. Luciferase (Luc) protein was purchased from LSBio (cat. no. LS-G5533-150) and dissolved in PBS, pH7.4 to a final concentration of 300 μg/mL. Filter-sterilized PMPs were loaded with luciferase protein by electroporation, using a protocol adapted from Rachael W. Sirianni and Bahareh Behkam (eds.), Targeted Drug Delivery: Methods and Protocols, Methods in Molecular Biology, vol. 1831. PMPs alone (PMP control), luciferase protein alone (protein control), or PMP+luciferase protein (protein-loaded PMPs), were mixed with 4.8× electroporation buffer (100% Optiprep (Sigma, D1556) in UltraPure water) to have a final 21% Optiprep concentration in the reaction mix (see Table 6). Protein control was made by mixing luciferase protein with UltraPure water instead of Optiprep (protein control), as the final PMP-Luc pellet was diluted in water. Samples were transferred into chilled cuvettes and electroporated at 0.400 kV, 125 μF (0.125 mF), resistance low 100Ω-high 600Ω with two pulses (4-10 ms) using a Biorad GenePulser®. The reaction was put on ice for 10 minutes, and transferred to a pre-ice chilled 1.5 ml ultracentrifuge tube. All samples containing PMPs were washed 3 times by adding 1.4 ml ultrapure water, followed by ultracentrifugation (100,000×g for 1.5 h at 4° C.). The final pellet was resuspended in a minimal volume of UltraPure water (50 μL) and kept at 4° C. until use. After electroporation, samples containing luciferase protein only were not washed by centrifugation and were stored at 4° C. until use.


To determine the PMP loading capacity, one microliter of Luciferase-loaded PMPs (PMP-Luc) and one microliter of unloaded PMPs were used. To determine the amount of Luciferase protein loaded in the PMPs, a Luciferase protein (LSBio, LS-G5533-150) standard curve was made (10, 30, 100, 300, and 1000 ng). Luciferase activity in all samples and standards was assayed using the ONE-Glo™ luciferase assay kit (Promega, E6110) and measuring luminescence using a SpectraMax® spectrophotometer. The amount of luciferase protein loaded in PMPs was determined using a standard curve of Luciferase protein (LSBio, LS-G5533-150) and normalized to the luminescence in the unloaded PMP sample. The loading capacity (ng luciferase protein per 1E+9 particles) was calculated as the luciferase protein concentration (ng) divided by the number of loaded PMPs (PMP-Luc). The PMP-Luc loading capacity was 2.76 ng Luciferase protein/1×109 PMPs.


Our results indicate that PMPs can be loaded with a model protein that remains active after encapsulation.









TABLE 6







Luciferase protein loading strategy using electroporation.











Luciferase
Luciferase
PMP



PMP (protein-
(protein
(PMP



loaded PMPs)
control)
control)














Luciferase protein (300
25
25
0


μg/mL (μL)


Optiprep 100% (μL)
14.7
0
14.7


UltraPure water (μL)
10.3
45
35.3


PMP GF (PMP stock
20
0
20


concentration = 7.56 × 1012


PMP/mL)





Final volume
70
70
70





Note:


25 μL luciferase is equivalent to 7.5 μg luciferase protein.






c) Treatment of Pseudomonas aeruginosa with Luciferase Protein-Loaded Grapefruit PMPs



Pseudomonas aeruginosa (ATCC) was grown overnight at 30° C. in tryptic soy broth supplemented with 50 ug/ml Rifampicin, according to the supplier's instructions. Pseudomonas aeruginosa cells (total volume of 5 ml) were collected by centrifugation at 3,000×g for 5 min. Cells were washed twice with 10 ml 10 mM MgCl2 and resuspended in 5 ml 10 mM MgCl2. The OD600 was measured and adjusted to 0.5.


Treatments were performed in duplicate in 1.5 ml Eppendorf tubes, containing 50 μl of the resuspended Pseudomonas aeruginosa cells supplemented with either 3 ng of PMP-Luc (diluted in Ultrapure water), 3 ng free luciferase protein (protein only control; diluted in Ultrapure water), or Ultrapure water (negative control). Ultrapure water was added to 75 μl in all samples. Samples were mixed and incubated at room temperature for 2 h and covered with aluminum foil. Samples were next centrifuged at 6,000×g for 5 min, and 70 μl of the supernatant was collected and saved for luciferase detection. The bacterial pellet was subsequently washed three times with 500 μl 10 mM MgCl2 containing 0.5% Triton X-100 to remove/burst PMPs that were not taken up. A final wash with 1 ml 10 mM MgCl2 was performed to remove residual Triton X-100. 970 μl of the supernatant was removed (leaving the pellet in 30 ul wash buffer) and 20 μl 10 mM MgCl2 and 25 μl Ultrapure water were added to resuspend the Pseudomonas aeruginosa pellets. Luciferase protein was measured by luminescence using the ONE-Glo™ luciferase assay kit (Promega, E6110), according to the manufacturer's instructions. Samples (bacterial pellet and supernatant samples) were incubated for 10 minutes, and luminescence was measured on a SpectraMax® spectrophotometer. Pseudomonas aeruginosa treated with Luciferase protein-loaded grapefruit PMPs had a 19.3 fold higher luciferase expression than treatment with free luciferase protein alone or the Ultrapure water control (negative control), indicating that PMPs are able to efficiently deliver their protein cargo into bacteria (FIG. 10). In addition, PMPs appear to protect luciferase protein from degradation, as free luciferase protein levels in both the supernatant and bacterial pellets are very low. Considering the treatment dose was 3 ng luciferase protein, based on the luciferase protein standard curve, free luciferase protein in supernatant or bacterial pellets after 2 hours of RT incubation in water corresponds to <0.1 ng luciferase protein, indicating protein degradation.


Our data shows that PMPs can deliver a protein cargo into organisms, and that PMPs can protect their cargo from degradation by the environment.


Example 15: Insulin-Loaded PMPs Protect their Protein Cargo from Enzymatic Degradation

This example demonstrates that human insulin protein was loaded into lemon and grapefruit PMPs and that PMP-encapsulated insulin is protected from degradation by proteinase K and simulated gastrointestinal (GI) fluids. Compositions that can withstand degradation by GI fluids may be useful for oral delivery of compounds, e.g., proteins.


a) Production of PMPs


Lemons and grapefruits were obtained from a local grocery store. Fruits were washed with 1% Liquinox® (Alconox®) detergent and rinsed under warm water. Six liters each of lemon and grapefruit juice were collected using a juice press, depulped through a 1 mm mesh pore size metal strainer, and adjusted to pH 4.5 with 10 N sodium hydroxide before the addition of pectinase enzyme at a final concentration of 0.5 U/mL (Pectinase from Aspergillus niger, Sigma). The juice was incubated with the pectinase enzyme for 2 hours at 25° C. and subsequently centrifuged at 3,000×g for 20 minutes, followed by centrifugation at 10,000×g for 40 minutes to remove large debris. Next, EDTA was added to the processed juice to a final concentration of 50 mM, and pH was adjusted to 7.5. Juice clarification was performed by vacuum filtration through 11 μm filter paper (Whatman®), followed by 1 μM syringe-filtration (glass fiber, VWR®) and 0.45 μM vacuum filtration (PES, Celltreat® Scientific Products) to remove large particles.


Filtered juice was subsequently concentrated, washed, and concentrated again by tangential flow filtration (TFF) using a 300 kDa pore size hollow fiber filter. Juice was concentrated 8×, followed by diafiltration into 10 diavolumes of 1×PBS (pH 7.4), and further concentrated to a final concentration of 50× based on the initial juice volume. Next, we used size exclusion chromatography (SEC; maxiPURE-EVs size exclusion chromatography columns, HansaBioMed Life Sciences) to elute the PMP-containing fractions, which were analyzed by absorbance at 280 nm (SpectraMax® spectrophotometer) and protein concentration was determined by BCA assay (Pierce™ BCA Protein Assay Kit, Thermo Scientific) to verify the PMP-containing fractions and late fractions containing contaminants. Lemon SEC fractions 3-8 (early fractions) contained purified PMPs; fractions 9-14 contained contaminants. Grapefruit SEC fractions 3-7 (early fractions) contained purified PMPs; fractions 8-14 contained contaminants. The early fractions were combined and filter-sterilized by sequential filtration using 1 μm glass fiber syringe filters (Acrodisc®, Pall Corporation), 0.45 μm syringe filters (Whatman® PURADISC™), and 0.22 μm (Whatman® PURADISC™) syringe filters under aseptic conditions in a tissue culture hood. Then, PMPs were concentrated by ultracentrifugation for 1.5 hours at 40,000×g at 4° C. The PMP pellet was resuspended in 5.5 mL of sterile 1×PBS (pH 7.4). Final PMP concentration (7.59×1013 lemon PMPs/mL; 3.54×1013 grapefruit PMPs/mL) and PMP median size were determined by NanoFCM, using concentration and size standards provided by the manufacturer. Protein concentration of the final PMP suspension was determined by BCA (Pierce™ BCA Protein Assay Kit, Thermo Scientific) (lemon PMPs 1.1 mg/mL; grapefruit PMPs 4.4 mg/mL). 2 mL of the produced lemon PMPs and 2 mL of the produced grapefruit PMPs were ultracentrifuged (1.5 hours, 40,000×g, 4° C.) to replace the PBS buffer with UltraPure™ water (Invitrogen), and the concentration was remeasured by NanoFCM (8.42×1013 lemon PMPs/mL; 3.29×1013 grapefruit PMPs/mL). These PMP suspensions were used for lipid extraction as described in Example 15b.


b) Loading of PMPs with Insulin Protein


Total lipids from lemon and grapefruit PMPs were extracted using the Bligh-Dyer method (Bligh and Dyer, Can J Biochem Physiol, 37: 911-917, 1959). PMP pellets were prepared by ultracentrifugation at 40,000×g for 1.5 hours at 4° C. and resuspended in UltraPure™ water (Invitrogen). In a glass tube, a mixture of chloroform:methanol (CHCl3:MeOH) at a 1:2 v/v ratio was prepared. For each 1 mL PMP sample, 3.75 mL of CHCl3:MeOH was added and vortexed. Then, 1.25 mL CHCl3 was added and vortexed. Finally, 1.25 mL UltraPure™ water (Invitrogen) was added and vortexed. This preparation was centrifuged at 210×g in table-top centrifuge for 5 minutes at room temperature to give a two-phase system (aqueous on top, organic at the bottom). The organic phase was recovered using a glass Pasteur pipette, taking care to avoid both the aqueous phase and the interphase. The organic phase was aliquoted into smaller volumes containing approximately 2-3 mg of lipids (1 L of citrus juice yields approximately 3-5×1013 PMPs, which corresponds to approximately 10 mg of lipids). Lipid aliquots were dried under nitrogen gas and stored at −20° C. until use.


Recombinant human insulin (Gibco, cat. no. A11382II) was dissolved in 10 mM hydrochloric acid at 10 mg/mL and diluted to 1 mg/mL in water. Insulin-loaded lipid reconstructed PMPs (recPMPs) were prepared from 3 mg dried lemon PMP lipids and 0.6 mg insulin (5:1 w/w ratio), which was added to the lipid film at a volume of 600 μL. Glass beads (˜7-8) were added, and the solution was agitated at room temperature for 1-2 hours. The samples were then sonicated in a water bath sonicator (Branson) for 5 minutes at room temperature, vortexed, and agitated again at room temperature for 1-2 hours. The formulations were then extruded using an Mini Extruder (Avanti® Polar Lipids) with sequential 800 nm, 400 nm, and 200 nm polycarbonate membranes. Subsequently, the formulation was purified using a Zeba™ Spin Desalting Column (40 kDa MWCO, Thermo Fisher Scientific), followed by ultracentrifugation at 100,000×g for 45 minutes, and washed once with UltraPure™ water. The pellet was resuspended in 1×PBS (pH 7.4) to a final concentration of 7.94×1011 recPMPs/mL, measured using nanoFCM.


Insulin-loaded grapefruit recPMPs were similarly formulated, except that 2 mg of dried lipids was mixed with 0.4 mg insulin (maintaining the 5:1 w/w ratio). Samples were agitated at room temperature for 3.5 hours, sonicated for 5 minutes, vortexed, and again sonicated for 5 minutes, all at room temperature. Extrusion was performed as described above. Purification was done using Amicon® Ultra centrifugation filters (100K MWCO, Millipore) at 14,000×g for 5 minutes (repeated once), followed by Zeba™ Spin Desalting Column (40 kDa MWCO, Thermo Fisher Scientific) and ultracentrifugation as described above. The pellet was resuspended in 1×PBS to a final concentration of 1.19×1012 recPMPs/mL, measured using nanoFCM.


To assess insulin loading into recPMPs and to test whether insulin-loaded recPMPs from lemon and grapefruit PMP lipids can protect human insulin protein, a proteinase K (ProtK) treatment followed by Western blot analysis was performed. To this end, insulin-loaded recPMP samples were incubated with 20 μg/mL ProtK (New England Biolabs® Inc.) in 50 mM Tris hydrochloride (pH 7.5) and 5 mM calcium chloride at 37° C. for 1 hour with agitation.


To assess insulin protein levels, samples (10 μL) were diluted with Laemmli sample buffer with Orange G (Sigma) substituted for bromophenol blue to eliminate signal interference during imaging. Samples were boiled for 10 minutes, cooled on ice, loaded onto Tris-glycine gels (TGX™, Bio-Rad). Subsequently, gels were transferred onto nitrocellulose membranes using an iBlot™ 2 system (Invitrogen) according to the manufacturer's instructions. Nitrocellulose membranes were briefly washed with 1×PBS (pH 7.4) and blocked with Odyssey blocking buffer (Li-COR) for 1 hour at room temperature. Membranes were then incubated with 1:1000 rabbit anti-insulin primary antibody (ab181547, Abcam), followed by 1:10,000 goat anti-rabbit IRDye® 800CW secondary antibody (Li-COR) for 2 hours each. Membranes were washed three times after each antibody incubation with 1×PBS with 0.1% Tween® 20 (Sigma) and a final rinse in 1×PBS. Membranes were imaged on an iBright™ 1500 FL (Invitrogen™). Lemon and grapefruit insulin-recPMP samples showed comparable levels of insulin protein with and without ProtK treatment, indicating that the insulin is encapsulated and protected within the PMPs. Quantification of the amount of loaded insulin based on free insulin protein standards and normalized for PMP concentration revealed loading of 21 ng of insulin per 109 lemon recPMPs.


To determine whether lysing the PMP lipid membrane before or after proteinase K (ProtK) treatment affected insulin stability, grapefruit insulin-loaded recPMP samples were treated with (1) 1% TRITON™ X-100 for 30 minutes (lysing the lipid membranes and exposing the protein cargo); (2) 10 μg/mL ProtK treatment for 1 hour; (3) 1% TRITON™ X-100 for 30 minutes, followed by 10 μg/mL ProtK treatment for 1 hour, and inactivating the reaction by adding 10 mM PMSF; and (4) 10 μg/ml ProtK treatment for 1 hour, inactivating ProtK by adding 10 mM PMSF, followed by 1% TRITON™ X-100 for 30 minutes. All treatments were performed at 37° C. with agitation. A Western blot for insulin was performed for each sample as described above (FIG. 11A). Encapsulated insulin cargo was degraded only when PMP membranes were lysed by TRITON™ X-100 prior to ProtK digestion, demonstrating that insulin protein is encapsulated inside the PMPs and that PMPs protect protein cargo from enzymatic digestion by ProtK.


c) Stability of Insulin-Loaded PMPs in GI Fluids


To further assess the stability of encapsulated insulin, loaded PMPs prepared from lemon lipids were exposed to simulated GI fluids that contain relevant bile acids, digestive enzymes, and pH to mimic distinct gastrointestinal environments and conditions. Digestive buffers were purchased from Biorelevant and prepared according to the manufacturer's instructions. The following buffers were used: FaSSGF (fasted stomach, pH 1.6), FaSSIF (fasted small intestines, pH 6.4), and FeSSIF (fed small intestines, pH 5.8). 1×PBS (pH 7.4) was used as negative control. For each sample, 980 μL buffer was added to 20 μL insulin-loaded recPMPs (lemon; 7.94×1011 recPMPs/mL) under low vortexing. Each treatment (buffer condition) was performed in duplicate. Insulin-loaded recPMPs were incubated in FaSSGF for 1 hour and in all other buffers for 4 hours to approximate the passage times in the human digestive system. All incubations were performed at 37° C. under slow rotation. Following incubation at 37° C., samples were placed on ice and centrifuged at 100,000×g for 50 minutes to pellet the insulin-loaded recPMPs. Samples were washed once by resuspension in UltraPure™ water (Invitrogen) and centrifuged again. Pellets were then resuspended in 10 μL UltraPure™ water and used for Western blot analysis to detect insulin protein as described above. Imaging of the GI buffer-treated samples (FIG. 11B) revealed that insulin-loaded recPMPs are stable in buffers simulating both fasted stomach (FaSSGF) and fasted small intestines (FaSSIF). In simulated fed small intestine (FeSSIF) buffer, however, insulin could not be detected (FIG. 11B), indicating that under these conditions insulin-loaded recPMPs vesicles were not able to protect insulin from degradation. Free insulin protein was stable only in 1×PBS, but unstable in all three GI buffers used (data not shown). Taken together, these experiments show that reconstructed PMPs from citrus lipids protect their protein payload from degradation by low pH (FaSSGF) and digestive enzymes/GI fluids (ProtK, FaSSIF).


Other Embodiments

Although the foregoing invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, the descriptions and examples should not be construed as limiting the scope of the invention. The disclosures of all patent and scientific literature cited herein are expressly incorporated in their entirety by reference.


Other embodiments are within the claims.


APPENDIX









TABLE 7





Plant EV-Markers

















Example Species
Accession No.
Protein Name






Arabidopsis thaliana

C0LGG8
Probable LRR receptor-like serine/threonine-protein kinase




At1g53430 (EC 2.7.11.1)



Arabidopsis thaliana

F4HQT8
Uncharacterized protein



Arabidopsis thaliana

F4HWU0
Protein kinase superfamily protein



Arabidopsis thaliana

F4I082
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S




albumin superfamily protein



Arabidopsis thaliana

F4I3M3
Kinase with tetratricopeptide repeat domain-containing




protein



Arabidopsis thaliana

F4IB62
Leucine-rich repeat protein kinase family protein



Arabidopsis thaliana

O03042
Ribulose bisphosphate carboxylase large chain (RuBisCO




large subunit) (EC 4.1.1.39)



Arabidopsis thaliana

O03986
Heat shock protein 90-4 (AtHSP90.4) (AtHsp90-4) (Heat




shock protein 81-4) (Hsp81-4)



Arabidopsis thaliana

O04023
Protein SRC2 homolog (AtSRC2)



Arabidopsis thaliana

O04309
Jacalin-related lectin 35 (JA-responsive protein 1)




(Myrosinase-binding protein-like At3g16470)



Arabidopsis thaliana

O04314
PYK10-binding protein 1 (Jacalin-related lectin 30) (Jasmonic




acid-induced protein)



Arabidopsis thaliana

O04922
Probable glutathione peroxidase 2 (EC 1.11.1.9)



Arabidopsis thaliana

O22126
Fasciclin-like arabinogalactan protein 8 (AtAGP8)



Arabidopsis thaliana

O23179
Patatin-like protein 1 (AtPLP1 (EC 3.1.1.—) (Patatin-related




phospholipase A IIgamma) (pPLAIIg) (Phospholipase A IVA)




(AtPLAIVA)



Arabidopsis thaliana

O23207
Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2




(EC 1.6.5.2)



Arabidopsis thaliana

O23255
Adenosylhomocysteinase 1 (AdoHcyase 1) (EC 3.3.1.1)




(Protein EMBRYO DEFECTIVE 1395) (Protein




HOMOLOGY-DEPENDENT GENE SILENCING 1)




(S-adenosyl-L-homocysteine hydrolase 1)




(SAH hydrolase 1)



Arabidopsis thaliana

O23482
Oligopeptide transporter 3 (AtOPT3)



Arabidopsis thaliana

O23654
V-type proton ATPase catalytic subunit A (V-ATPase subunit




A) (EC 3.6.3.14) (V-ATPase 69 kDa subunit) (Vacuolar H(+)-ATPase




subunit A) (Vacuolar proton pump subunit alpha)



Arabidopsis thaliana

O48788
Probable inactive receptor kinase At2g26730



Arabidopsis thaliana

O48963
Phototropin-1 (EC 2.7.11.1) (Non-phototropic hypocotyl




protein 1) (Root phototropism protein 1)



Arabidopsis thaliana

O49195
Vegetative storage protein 1



Arabidopsis thaliana

O50008
5-methyltetrahydropteroyltriglutamate--homocysteine




methyltransferase 1 (EC 2.1.1.14) (Cobalamin-independent




methionine synthase 1) (AtMS1) (Vitamin-B12-independent




methionine synthase 1)



Arabidopsis thaliana

O64696
Putative uncharacterized protein At2g34510



Arabidopsis thaliana

O65572
Carotenoid 9,10(9′,10′)-cleavage dioxygenase 1 (EC




1.14.99.n4) (AtCCD1) (Neoxanthin cleavage enzyme NC1)




(AtNCED1)



Arabidopsis thaliana

O65660
PLAT domain-containing protein 1 (AtPLAT1) (PLAT domain




protein 1)



Arabidopsis thaliana

O65719
Heat shock 70 kDa protein 3 (Heat shock cognate 70 kDa




protein 3) (Heat shock cognate protein 70-3) (AtHsc70-3)




(Heat shock protein 70-3) (AtHsp70-3)



Arabidopsis thaliana

O80517
Uclacyanin-2 (Blue copper-binding protein II) (BCB II)




(Phytocyanin 2) (Uclacyanin-II)



Arabidopsis thaliana

O80576
At2g44060 (Late embryogenesis abundant protein, group 2)




(Similar to late embryogenesis abundant proteins)



Arabidopsis thaliana

O80725
ABC transporter B family member 4 (ABC transporter




ABCB.4) (AtABCB4) (Multidrug resistance protein 4)




(P-glycoprotein 4)



Arabidopsis thaliana

O80837
Remorin (DNA-binding protein)



Arabidopsis thaliana

O80852
Glutathione S-transferase F9 (AtGSTF9) (EC 2.5.1.18)




(AtGSTF7) (GST class-phi member 9)



Arabidopsis thaliana

O80858
Expressed protein (Putative uncharacterized protein




At2g30930) (Putative uncharacterized protein At2g30930;




F7F1.14)



Arabidopsis thaliana

O80939
L-type lectin-domain containing receptor kinase IV.1




(Arabidopsis thaliana lectin-receptor kinase e) (AthlecRK-e)




(LecRK-IV.1) (EC 2.7.11.1) (Lectin Receptor Kinase 1)



Arabidopsis thaliana

O80948
Jacalin-related lectin 23 (Myrosinase-binding protein-like




At2g39330)



Arabidopsis thaliana

O82628
V-type proton ATPase subunit G1 (V-ATPase subunit G1)




(Vacuolar H(+)-ATPase subunit G isoform 1) (Vacuolar




proton pump subunit G1)



Arabidopsis thaliana

P10795
Ribulose bisphosphate carboxylase small chain 1A,




chloroplastic (RuBisCO small subunit 1A) (EC 4.1.1.39)



Arabidopsis thaliana

P10896
Ribulose bisphosphate carboxylase/oxygenase activase,




chloroplastic (RA) (RuBisCO activase)



Arabidopsis thaliana

P17094
60S ribosomal protein L3-1 (Protein EMBRYO DEFECTIVE




2207)



Arabidopsis thaliana

P19456
ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton




pump 2)



Arabidopsis thaliana

P20649
ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton




pump 1)



Arabidopsis thaliana

P22953
Probable mediator of RNA polymerase II transcription subunit




37e (Heat shock 70 kDa protein 1) (Heat shock cognate 70




kDa protein 1) (Heat shock cognate protein 70-1) (AtHsc70-1)




(Heat shock protein 70-1) (AtHsp70-1) (Protein




EARLY-RESPONSIVE TO DEHYDRATION 2)



Arabidopsis thaliana

P23586
Sugar transport protein 1 (Glucose transporter) (Hexose




transporter 1)



Arabidopsis thaliana

P24636
Tubulin beta-4 chain (Beta-4-tubulin)



Arabidopsis thaliana

P25696
Bifunctional enolase 2/transcriptional activator (EC 4.2.1.11)




(2-phospho-D-glycerate hydro-lyase 2) (2-phosphoglycerate




dehydratase 2) (LOW EXPRESSION OF OSMOTICALLY




RESPONSIVE GENES 1)



Arabidopsis thaliana

P25856
Glyceraldehyde-3-phosphate dehydrogenase GAPA1,




chloroplastic (EC 1.2.1.13) (NADP-dependent




glyceraldehydephosphate dehydrogenase A subunit 1)



Arabidopsis thaliana

P28186
Ras-related protein RABE1c (AtRABE1c) (Ras-related




protein Ara-3) (Ras-related protein Rab8A) (AtRab8A)



Arabidopsis thaliana

P30302
Aquaporin PIP2-3 (Plasma membrane intrinsic protein 2-3)




(AtPIP2; 3) (Plasma membrane intrinsic protein 2c) (PIP2c)




(RD28-PIP) (TMP2C) (Water stress-induced tonoplast




intrinsic protein) (WSI-TIP) [Cleaved into: Aquaporin PIP2-3,




N-terminally processed]



Arabidopsis thaliana

P31414
Pyrophosphate-energized vacuolar membrane proton pump




1 (EC 3.6.1.1) (Pyrophosphate-energized inorganic




pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton




pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3)



Arabidopsis thaliana

P32961
Nitrilase 1 (EC 3.5.5.1)



Arabidopsis thaliana

P38666
60S ribosomal protein L24-2 (Protein SHORT VALVE 1)



Arabidopsis thaliana

P39207
Nucleoside diphosphate kinase 1 (EC 2.7.4.6) (Nucleoside




diphosphate kinase I) (NDK I) (NDP kinase I) (NDPK I)



Arabidopsis thaliana

P42643
14-3-3-like protein GF14 chi (General regulatory factor 1)



Arabidopsis thaliana

P42737
Beta carbonic anhydrase 2, chloroplastic (AtbCA2)




(AtbetaCA2) (EC 4.2.1.1) (Beta carbonate dehydratase 2)



Arabidopsis thaliana

P42759
Dehydrin ERD10 (Low-temperature-induced protein LTI45)



Arabidopsis thaliana

P42761
Glutathione S-transferase F10 (AtGSTF10) (EC 2.5.1.18)




(AtGSTF4) (GST class-phi member 10) (Protein EARLY




RESPONSE TO DEHYDRATION 13)



Arabidopsis thaliana

P42763
Dehydrin ERD14



Arabidopsis thaliana

P42791
60S ribosomal protein L18-2



Arabidopsis thaliana

P43286
Aquaporin PIP2-1 (Plasma membrane intrinsic protein 2-1)




(AtPIP2; 1) (Plasma membrane intrinsic protein 2a) (PIP2a)




[Cleaved into: Aquaporin PIP2-1, N-terminally processed]



Arabidopsis thaliana

P46286
60S ribosomal protein L8-1 (60S ribosomal protein L2)




(Protein EMBRYO DEFECTIVE 2296)



Arabidopsis thaliana

P46422
Glutathione S-transferase F2 (AtGSTF2) (EC 2.5.1.18) (24




kDa auxin-binding protein) (AtPM24) (GST class-phi member 2)



Arabidopsis thaliana

P47998
Cysteine synthase 1 (EC 2.5.1.47) (At.OAS.5-8) (Beta-substituted




Ala synthase 1; 1) (ARAth-Bsas1; 1) (CSase A)




(AtCS-A) (Cys-3A) (O-acetylserine (thiol)-lyase 1) (OAS-TL




A) (O-acetylserine sulfhydrylase) (Protein ONSET OF LEAF




DEATH 3)



Arabidopsis thaliana

P48347
14-3-3-like protein GF14 epsilon (General regulatory factor 10)



Arabidopsis thaliana

P48491
Triosephosphate isomerase, cytosolic (TIM) (Triose-phosphate




isomerase) (EC 5.3.1.1)



Arabidopsis thaliana

P50318
Phosphoglycerate kinase 2, chloroplastic (EC 2.7.2.3)



Arabidopsis thaliana

P53492
Actin-7 (Actin-2)



Arabidopsis thaliana

P54144
Ammonium transporter 1 member 1 (AtAMT1; 1)



Arabidopsis thaliana

P92963
Ras-related protein RABB1c (AtRABB1c) (Ras-related




protein Rab2A) (AtRab2A)



Arabidopsis thaliana

P93004
Aquaporin PIP2-7 (Plasma membrane intrinsic protein 2-7)




(AtPIP2; 7) (Plasma membrane intrinsic protein 3) (Salt




stress-induced major intrinsic protein) [Cleaved into:




Aquaporin PIP2-7, N-terminally processed]



Arabidopsis thaliana

P93025
Phototropin-2 (EC 2.7.11.1) (Defective in chloroplast




avoidance protein 1) (Non-phototropic hypocotyl 1-like




protein 1) (AtKin7) (NPH1-like protein 1)



Arabidopsis thaliana

P93819
Malate dehydrogenase 1, cytoplasmic (EC 1.1.1.37)




(Cytosolic NAD-dependent malate dehydrogenase 1)




(cNAD-MDH1) (Cytosolic malate dehydrogenase 1)




(Cytosolic MDH1)



Arabidopsis thaliana

Q03250
Glycine-rich RNA-binding protein 7 (AtGR-RBP7) (AtRBG7)




(Glycine-rich protein 7) (AtGRP7) (Protein COLD,




CIRCADIAN RHYTHM, AND RNA BINDING 2) (Protein CCR2)



Arabidopsis thaliana

Q05431
L-ascorbate peroxidase 1, cytosolic (AP) (AtAPx01) (EC




1.11.1.11)



Arabidopsis thaliana

Q06611
Aquaporin PIP1-2 (AtPIP1; 2) (Plasma membrane intrinsic




protein 1b) (PIP1b) (Transmembrane protein A) (AthH2)




(TMP-A)



Arabidopsis thaliana

Q07488
Blue copper protein (Blue copper-binding protein) (AtBCB)




(Phytocyanin 1) (Stellacyanin)



Arabidopsis thaliana

Q0WLB5
Clathrin heavy chain 2



Arabidopsis thaliana

Q0WNJ6
Clathrin heavy chain 1



Arabidopsis thaliana

Q1ECE0
Vesicle-associated protein 4-1 (Plant VAP homolog 4-1)




(AtPVA41) (Protein MEMBRANE-ASSOCIATED MANNITOL-INDUCED)




(AtMAMI) (VAMP-associated protein 4-1)



Arabidopsis thaliana

Q38882
Phospholipase D alpha 1 (AtPLDalpha1) (PLD alpha 1) (EC




3.1.4.4) (Choline phosphatase 1) (PLDalpha)




(Phosphatidylcholine-hydrolyzing phospholipase D 1)



Arabidopsis thaliana

Q38900
Peptidyl-prolyl cis-trans isomerase CYP19-1 (PPIase CYP19-1)




(EC 5.2.1.8) (Cyclophilin of 19 kDa 1) (Rotamase




cyclophilin-3)



Arabidopsis thaliana

Q39033
Phosphoinositide phospholipase C 2 (EC 3.1.4.11)




(Phosphoinositide phospholipase PLC2) (AtPLC2) (PI-PLC2)



Arabidopsis thaliana

Q39085
Delta(24)-sterol reductase (EC 1.3.1.72) (Cell elongation




protein DIMINUTO) (Cell elongation protein Dwarf1) (Protein




CABBAGE1) (Protein ENHANCED VERY-LOW-FLUENCE




RESPONSE 1)



Arabidopsis thaliana

Q39228
Sugar transport protein 4 (Hexose transporter 4)



Arabidopsis thaliana

Q39241
Thioredoxin H5 (AtTrxh5) (Protein LOCUS OF




INSENSITIVITY TO VICTORIN 1) (Thioredoxin 5) (AtTRX5)



Arabidopsis thaliana

Q39258
V-type proton ATPase subunit E1 (V-ATPase subunit E1)




(Protein EMBRYO DEFECTIVE 2448) (Vacuolar H(+)-




ATPase subunit E isoform 1) (Vacuolar proton pump subunit E1)



Arabidopsis thaliana

Q42112
60S acidic ribosomal protein P0-2



Arabidopsis thaliana

Q42403
Thioredoxin H3 (AtTrxh3) (Thioredoxin 3) (AtTRX3)



Arabidopsis thaliana

Q42479
Calcium-dependent protein kinase 3 (EC 2.7.11.1)




(Calcium-dependent protein kinase isoform CDPK6) (AtCDPK6)



Arabidopsis thaliana

Q42547
Catalase-3 (EC 1.11.1.6)



Arabidopsis thaliana

Q56WH1
Tubulin alpha-3 chain



Arabidopsis thaliana

Q56WK6
Patellin-1



Arabidopsis thaliana

Q56X75
CASP-like protein 4D2 (AtCASPL4D2)



Arabidopsis thaliana

Q56ZI2
Patellin-2



Arabidopsis thaliana

Q7Y208
Glycerophosphodiester phosphodiesterase GDPDL1 (EC




3.1.4.46) (Glycerophosphodiester phosphodiesterase-like 1)




(ATGDPDL1) (Glycerophosphodiesterase-like 3) (Protein




SHV3-LIKE 2)



Arabidopsis thaliana

Q84VZ5
Uncharacterized GPI-anchored protein At5g19240



Arabidopsis thaliana

Q84WU7
Eukaryotic aspartyl protease family protein (Putative




uncharacterized protein At3g51330)



Arabidopsis thaliana

Q8GUL8
Uncharacterized GPI-anchored protein At5g19230



Arabidopsis thaliana

Q8GYA4
Cysteine-rich receptor-like protein kinase 10 (Cysteine-rich




RLK10) (EC 2.7.11.—) (Receptor-like protein kinase 4)



Arabidopsis thaliana

Q8GYN5
RPM1-interacting protein 4



Arabidopsis thaliana

Q8GZ99
At5g49760 (Leucine-rich repeat protein kinase family protein)




(Leucine-rich repeat receptor-like protein kinase) (Putative




receptor protein kinase)



Arabidopsis thaliana

Q8L636
Sodium/calcium exchanger NCL (Na(+)/Ca(2+)-exchange




protein NCL) (Protein NCX-like) (AtNCL)



Arabidopsis thaliana

Q8L7S1
At1g45200 (At1g45200/At1g45200) (Triacylglycerol




lipase-like 1)



Arabidopsis thaliana

Q8LAA6
Probable aquaporin PIP1-5 (AtPIP1; 5) (Plasma membrane




intrinsic protein 1d) (PIP1d)



Arabidopsis thaliana

Q8LCP6
Endoglucanase 10 (EC 3.2.1.4) (Endo-1,4-beta glucanase 10)



Arabidopsis thaliana

Q8RWV0
Transketolase-1, chloroplastic (TK) (EC 2.2.1.1)



Arabidopsis thaliana

Q8S8Q6
Tetraspanin-8



Arabidopsis thaliana

Q8VZG8
MDIS1-interacting receptor like kinase 2 (AtMIK2) (Probable




LRR receptor-like serine/threonine-protein kinase




At4g08850) (EC 2.7.11.1)



Arabidopsis thaliana

Q8VZU2
Syntaxin-132 (AtSYP132)



Arabidopsis thaliana

Q8W4E2
V-type proton ATPase subunit B3 (V-ATPase subunit B3)




(Vacuolar H(+)-ATPase subunit B isoform 3) (Vacuolar




proton pump subunit B3)



Arabidopsis thaliana

Q8W4S4
V-type proton ATPase subunit a3 (V-ATPase subunit a3)




(V-type proton ATPase 95 kDa subunit a isoform 3) (V-ATPase




95 kDa isoform a3) (Vacuolar H(+)-ATPase subunit a isoform




3) (Vacuolar proton pump subunit a3) (Vacuolar proton




translocating ATPase 95 kDa subunit a isoform 3)



Arabidopsis thaliana

Q93VG5
40S ribosomal protein S8-1



Arabidopsis thaliana

Q93XY5
Tetraspanin-18 (TOM2A homologous protein 2)



Arabidopsis thaliana

Q93YS4
ABC transporter G family member 22 (ABC transporter




ABCG.22) (AtABCG22) (White-brown complex homolog




protein 23) (AtWBC23)



Arabidopsis thaliana

Q93Z08
Glucan endo-1,3-beta-glucosidase 6 (EC 3.2.1.39)




((1 −> 3)-beta-glucan endohydrolase 6)




((1 −> 3)-beta-glucanase 6) (Beta-1,3-endoglucanase




6) (Beta-1,3-glucanase 6)



Arabidopsis thaliana

Q940M8
3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295)




(At1g73650/F25P22_7)



Arabidopsis thaliana

Q944A7
Probable serine/threonine-protein kinase At4g35230 (EC




2.7.11.1)



Arabidopsis thaliana

Q944G5
Protein NRT1/PTR FAMILY 2.10 (AtNPF2.10) (Protein




GLUCOSINOLATE TRANSPORTER-1)



Arabidopsis thaliana

Q94AZ2
Sugar transport protein 13 (Hexose transporter 13)




(Multicopy suppressor of snf4 deficiency protein 1)



Arabidopsis thaliana

Q94BT2
Auxin-induced in root cultures protein 12



Arabidopsis thaliana

Q94CE4
Beta carbonic anhydrase 4 (AtbCA4) (AtbetaCA4) (EC




4.2.1.1) (Beta carbonate dehydratase 4)



Arabidopsis thaliana

Q94KI8
Two pore calcium channel protein 1 (Calcium channel protein




1) (AtCCH1) (Fatty acid oxygenation up-regulated protein 2)




(Voltage-dependent calcium channel protein TPC1) (AtTPC1)



Arabidopsis thaliana

Q96262
Plasma membrane-associated cation-binding protein 1




(AtPCAP1) (Microtubule-destabilizing protein 25)



Arabidopsis thaliana

Q9C5Y0
Phospholipase D delta (AtPLDdelta) (PLD delta) (EC 3.1.4.4)



Arabidopsis thaliana

Q9C7F7
Non-specific lipid transfer protein GPI-anchored 1




(AtLTPG-1) (Protein LTP-GPI-ANCHORED 1)



Arabidopsis thaliana

Q9C821
Proline-rich receptor-like protein kinase PERK15 (EC




2.7.11.1) (Proline-rich extensin-like receptor kinase 15)




(AtPERK15)



Arabidopsis thaliana

Q9C8G5
CSC1-like protein ERD4 (Protein EARLY-RESPONSIVE TO




DEHYDRATION STRESS 4)



Arabidopsis thaliana

Q9C9C5
60S ribosomal protein L6-3



Arabidopsis thaliana

Q9CAR7
Hypersensitive-induced response protein 2 (AtHIR2)



Arabidopsis thaliana

Q9FFH6
Fasciclin-like arabinogalactan protein 13



Arabidopsis thaliana

Q9FGT8
Temperature-induced lipocalin-1 (AtTIL1)



Arabidopsis thaliana

Q9FJ62
Glycerophosphodiester phosphodiesterase GDPDL4 (EC




3.1.4.46) (Glycerophosphodiester phosphodiesterase-like 4)




(ATGDPDL4) (Glycerophosphodiesterase-like 1) (Protein




SHV3-LIKE 1)



Arabidopsis thaliana

Q9FK68
Ras-related protein RABA1c (AtRABA1c)



Arabidopsis thaliana

Q9FKS8
Lysine histidine transporter 1



Arabidopsis thaliana

Q9FM65
Fasciclin-like arabinogalactan protein 1



Arabidopsis thaliana

Q9FNH6
NDR1/HIN1-like protein 3



Arabidopsis thaliana

Q9FRL3
Sugar transporter ERD6-like 6



Arabidopsis thaliana

Q9FWR4
Glutathione S-transferase DHAR1, mitochondrial (EC




2.5.1.18) (Chloride intracellular channel homolog 1) (CLIC




homolog 1) (Glutathione-dependent dehydroascorbate




reductase 1) (AtDHAR1) (GSH-dependent dehydroascorbate




reductase 1) (mtDHAR)



Arabidopsis thaliana

Q9FX54
Glyceraldehyde-3-phosphate dehydrogenase GAPC2,




cytosolic (EC 1.2.1.12) (NAD-dependent




glyceraldehydephosphate dehydrogenase C subunit 2)



Arabidopsis thaliana

Q9LE22
Probable calcium-binding protein CML27 (Calmodulin-like




protein 27)



Arabidopsis thaliana

Q9LEX1
At3g61050 (CaLB protein) (Calcium-dependent lipid-binding




(CaLB domain) family protein)



Arabidopsis thaliana

Q9LF79
Calcium-transporting ATPase 8, plasma membrane-type (EC




3.6.3.8) (Ca(2+)-ATPase isoform 8)



Arabidopsis thaliana

Q9LJG3
GDSL esterase/lipase ESM1 (EC 3.1.1.—) (Extracellular lipase




ESM1) (Protein EPITHIOSPECIFIER MODIFIER 1)




(AtESM1)



Arabidopsis thaliana

Q9LJI5
V-type proton ATPase subunit d1 (V-ATPase subunit d1)




(Vacuolar H(+)-ATPase subunit d isoform 1) (Vacuolar proton




pump subunit d1)



Arabidopsis thaliana

Q9LME4
Probable protein phosphatase 2C 9 (AtPP2C09) (EC




3.1.3.16) (Phytochrome-associated protein phosphatase 2C)




(PAPP2C)



Arabidopsis thaliana

Q9LNP3
At1g17620/F11A6_23 (F1L3.32) (Late embryogenesis




abundant (LEA) hydroxyproline-rich glycoprotein family)




(Putative uncharacterized protein At1g17620)



Arabidopsis thaliana

Q9LNW1
Ras-related protein RABA2b (AtRABA2b)



Arabidopsis thaliana

Q9LQU2
Protein PLANT CADMIUM RESISTANCE 1 (AtPCR1)



Arabidopsis thaliana

Q9LQU4
Protein PLANT CADMIUM RESISTANCE 2 (AtPCR2)



Arabidopsis thaliana

Q9LR30
Glutamate--glyoxylate aminotransferase 1 (AtGGT2) (EC




2.6.1.4) (Alanine aminotransferase GGT1) (EC 2.6.1.2)




(Alanine--glyoxylate aminotransferase GGT1) (EC 2.6.1.44)




(Alanine-2-oxoglutarate aminotransferase 1) (EC 2.6.1.—)



Arabidopsis thaliana

Q9LSI9
Inactive LRR receptor-like serine/threonine-protein kinase




BIR2 (Protein BAK1-INTERACTING RECEPTOR-LIKE




KINASE 2)



Arabidopsis thaliana

Q9LSQ5
NAD(P)H dehydrogenase (quinone) FQR1 (EC 1.6.5.2)




(Flavodoxin-like quinone reductase 1)



Arabidopsis thaliana

Q9LUT0
Protein kinase superfamily protein (Putative uncharacterized




protein At3g17410) (Serine/threonine protein kinase-like




protein)



Arabidopsis thaliana

Q9LV48
Proline-rich receptor-like protein kinase PERK1 (EC 2.7.11.1)




(Proline-rich extensin-like receptor kinase 1) (AtPERK1)



Arabidopsis thaliana

Q9LX65
V-type proton ATPase subunit H (V-ATPase subunit H)




(Vacuolar H(+)-ATPase subunit H) (Vacuolar proton pump




subunit H)



Arabidopsis thaliana

Q9LYG3
NADP-dependent malic enzyme 2 (AtNADP-ME2)




(NADP-malic enzyme 2) (EC 1.1.1.40)



Arabidopsis thaliana

Q9M088
Glucan endo-1,3-beta-glucosidase 5 (EC 3.2.1.39)




((1 −> 3)-beta-glucan endohydrolase 5)




((1 −> 3)-beta-glucanase 5) (Beta-1,3-endoglucanase




5) (Beta-1,3-glucanase 5)



Arabidopsis thaliana

Q9M2D8
Uncharacterized protein At3g61260



Arabidopsis thaliana

Q9M386
Late embryogenesis abundant (LEA) hydroxyproline-rich




glycoprotein family (Putative uncharacterized protein




At3g54200) (Putative uncharacterized protein F24B22.160)



Arabidopsis thaliana

Q9M390
Protein NRT1/PTR FAMILY 8.1 (AtNPF8.1) (Peptide




transporter PTR1)



Arabidopsis thaliana

Q9M5P2
Secretory carrier-associated membrane protein 3 (AtSC3)




(Secretory carrier membrane protein 3)



Arabidopsis thaliana

Q9M8T0
Probable inactive receptor kinase At3g02880



Arabidopsis thaliana

Q9SDS7
V-type proton ATPase subunit C (V-ATPase subunit C)




(Vacuolar H(+)-ATPase subunit C) (Vacuolar proton pump




subunit C)



Arabidopsis thaliana

Q9SEL6
Vesicle transport v-SNARE 11 (AtVTI11) (Protein SHOOT




GRAVITROPISM 4) (Vesicle soluble NSF attachment protein




receptor VTI1a) (AtVTI1a) (Vesicle transport v-SNARE




protein VTI1a)



Arabidopsis thaliana

Q9SF29
Syntaxin-71 (AtSYP71)



Arabidopsis thaliana

Q9SF85
Adenosine kinase 1 (AK 1) (EC 2.7.1.20) (Adenosine




5′-phosphotransferase 1)



Arabidopsis thaliana

Q9SIE7
PLAT domain-containing protein 2 (AtPLAT2) (PLAT domain




protein 2)



Arabidopsis thaliana

Q9SIM4
60S ribosomal protein L14-1



Arabidopsis thaliana

Q9SIU8
Probable protein phosphatase 2C 20 (AtPP2C20) (EC




3.1.3.16) (AtPPC3; 1.2)



Arabidopsis thaliana

Q9SJ81
Fasciclin-like arabinogalactan protein 7



Arabidopsis thaliana

Q9SKB2
Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein




kinase SOBIR1 (EC 2.7.10.1) (EC 2.7.11.1) (Protein




EVERSHED) (Protein SUPPRESSOR OF BIR1-1)



Arabidopsis thaliana

Q9SKR2
Synaptotagmin-1 (NTMC2T1.1) (Synaptotagmin A)



Arabidopsis thaliana

Q9SLF7
60S acidic ribosomal protein P2-2



Arabidopsis thaliana

Q9SPE6
Alpha-soluble NSF attachment protein 2 (Alpha-SNAP2)




(N-ethylmaleimide-sensitive factor attachment protein alpha 2)



Arabidopsis thaliana

Q9SRH6
Hypersensitive-induced response protein 3 (AtHIR3)



Arabidopsis thaliana

Q9SRY5
Glutathione S-transferase F7 (EC 2.5.1.18) (AtGSTF8) (GST




class-phi member 7) (Glutathione S-transferase 11)



Arabidopsis thaliana

Q9SRZ6
Cytosolic isocitrate dehydrogenase [NADP] (EC 1.1.1.42)



Arabidopsis thaliana

Q9SSK5
MLP-like protein 43



Arabidopsis thaliana

Q9SU13
Fasciclin-like arabinogalactan protein 2



Arabidopsis thaliana

Q9SU40
Monocopper oxidase-like protein SKU5 (Skewed roots)



Arabidopsis thaliana

Q9SUR6
Cystine lyase CORI3 (EC 4.4.1.35) (Protein CORONATINE




INDUCED 3) (Protein JASMONIC ACID RESPONSIVE 2)




(Tyrosine aminotransferase CORI3)



Arabidopsis thaliana

Q9SVC2
Syntaxin-122 (AtSYP122) (Synt4)



Arabidopsis thaliana

Q9SVF0
Putative uncharacterized protein AT4g38350 (Putative




uncharacterized protein F22I13.120)



Arabidopsis thaliana

Q9SW40
Major facilitator superfamily protein (Putative uncharacterized




protein AT4g34950) (Putative uncharacterized protein




T11I11.190)



Arabidopsis thaliana

Q9SYT0
Annexin D1 (AnnAt1) (Annexin A1)



Arabidopsis thaliana

Q9SZ11
Glycerophosphodiester phosphodiesterase GDPDL3 (EC




3.1.4.46) (Glycerophosphodiester phosphodiesterase-like 3)




(ATGDPDL3) (Glycerophosphodiesterase-like 2) (Protein




MUTANT ROOT HAIR 5) (Protein SHAVEN 3)



Arabidopsis thaliana

Q9SZN1
V-type proton ATPase subunit B2 (V-ATPase subunit B2)




(Vacuolar H(+)-ATPase subunit B isoform 2) (Vacuolar




proton pump subunit B2)



Arabidopsis thaliana

Q9SZP6
AT4g38690/F20M13_250 (PLC-like phosphodiesterases




superfamily protein) (Putative uncharacterized protein




AT4g38690) (Putative uncharacterized protein F20M13.250)



Arabidopsis thaliana

Q9SZR1
Calcium-transporting ATPase 10, plasma membrane-type




(EC 3.6.3.8) (Ca(2+)-ATPase isoform 10)



Arabidopsis thaliana

Q9T053
Phospholipase D gamma 1 (AtPLDgamma1) (PLD gamma 1)




(EC 3.1.4.4) (Choline phosphatase) (Lecithinase D)




(Lipophosphodiesterase II)



Arabidopsis thaliana

Q9T076
Early nodulin-like protein 2 (Phytocyanin-like protein)



Arabidopsis thaliana

Q9T0A0
Long chain acyl-CoA synthetase 4 (EC 6.2.1.3)



Arabidopsis thaliana

Q9T0G4
Putative uncharacterized protein AT4g10060 (Putative




uncharacterized protein T5L19.190)



Arabidopsis thaliana

Q9XEE2
Annexin D2 (AnnAt2)



Arabidopsis thaliana

Q9XGM1
V-type proton ATPase subunit D (V-ATPase subunit D)




(Vacuolar H(+)-ATPase subunit D) (Vacuolar proton pump




subunit D)



Arabidopsis thaliana

Q9XI93
At1g13930/F16A14.27 (F16A14.14) (F7A19.2 protein)




(Oleosin-B3-like protein)



Arabidopsis thaliana

Q9XIE2
ABC transporter G family member 36 (ABC transporter




ABCG.36) (AtABCG36) (Pleiotropic drug resistance protein




8) (Protein PENETRATION 3)



Arabidopsis thaliana

Q9ZPZ4
Putative uncharacterized protein (Putative uncharacterized




protein At1g09310) (T31J12.3 protein)



Arabidopsis thaliana

Q9ZQX4
V-type proton ATPase subunit F (V-ATPase subunit F)




(V-ATPase 14 kDa subunit) (Vacuolar H(+)-ATPase subunit F)




(Vacuolar proton pump subunit F)



Arabidopsis thaliana

Q9ZSA2
Calcium-dependent protein kinase 21 (EC 2.7.11.1)



Arabidopsis thaliana

Q9ZSD4
Syntaxin-121 (AtSYP121) (Syntaxin-related protein At-Syr1)



Arabidopsis thaliana

Q9ZV07
Probable aquaporin PIP2-6 (Plasma membrane intrinsic




protein 2-6) (AtPIP2; 6) (Plasma membrane intrinsic protein




2e) (PIP2e) [Cleaved into: Probable aquaporin PIP2-6,




N-terminally processed]



Arabidopsis thaliana

Q9ZVF3
MLP-like protein 328



Arabidopsis thaliana

Q9ZWA8
Fasciclin-like arabinogalactan protein 9



Arabidopsis thaliana

Q9ZSD4
SYR1, Syntaxin Related Protein 1, also known as SYP121,




PENETRATION1/PEN1 (Protein PENETRATION 1)



Citrus lemon

A1ECK0
Putative glutaredoxin



Citrus lemon

A9YVC9
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase




subunit beta (PFP) (EC 2.7.1.90) (6-phosphofructokinase,




pyrophosphate dependent) (PPi-PFK)




(Pyrophosphate-dependent 6-phosphofructose-1-kinase)



Citrus lemon

B2YGY1
Glycosyltransferase (EC 2.4.1.—)



Citrus lemon

B6DZD3
Glutathione S-transferase Tau2 (Glutathione transferase




Tau2)



Citrus lemon

C3VIC2
Translation elongation factor



Citrus lemon

C8CPS0
Importin subunit alpha



Citrus lemon

D3JWB5
Flavanone 3-hydroxylase



Citrus lemon

E0ADY2
Putative caffeic acid O-methyltransferase



Citrus lemon

E5DK62
ATP synthase subunit alpha (Fragment)



Citrus lemon

E9M5S3
Putative L-galactose-1-phosphate phosphatase



Citrus lemon

F1CGQ9
Heat shock protein 90



Citrus lemon

F8WL79
Aminopeptidase (EC 3.4.11.—)



Citrus lemon

F8WL86
Heat shock protein



Citrus lemon

K9JG59
Abscisic acid stress ripening-related protein



Citrus lemon

Q000W4
Fe(III)-chelate reductase



Citrus lemon

Q39538
Heat shock protein (Fragment)



Citrus lemon

Q5UEN6
Putative signal recognition particle protein



Citrus lemon

Q8GV08
Dehydrin



Citrus lemon

Q8L893
Cytosolic phosphoglucomutase (Fragment)



Citrus lemon

Q8S990
Polygalacturonase-inhibiting protein



Citrus lemon

Q8W3U6
Polygalacturonase-inhibitor protein



Citrus lemon

Q93XL8
Dehydrin COR15



Citrus lemon

Q941Q1
Non-symbiotic hemoglobin class 1



Citrus lemon

Q9MBF3
Glycine-rich RNA-binding protein



Citrus lemon

Q9SP55
V-type proton ATPase subunit G (V-ATPase subunit G)




(Vacuolar proton pump subunit G)



Citrus lemon

Q9THJ8
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39)




(Fragment)



Citrus lemon

Q9ZST2
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase




subunit alpha (PFP) (6-phosphofructokinase, pyrophosphate




dependent) (PPi-PFK) (Pyrophosphate-dependent




6-phosphofructose-1-kinase)



Citrus lemon

Q9ZWH6
Polygalacturonase inhibitor



Citrus lemon

S5DXI9
Nucleocapsid protein



Citrus lemon

S5NFC6
GTP cyclohydrolase



Citrus lemon

V4RG42
Uncharacterized protein



Citrus lemon

V4RGP4
Uncharacterized protein



Citrus lemon

V4RHN8
Uncharacterized protein



Citrus lemon

V4RJ07
Uncharacterized protein



Citrus lemon

V4RJK9
Adenosylhomocysteinase (EC 3.3.1.1)



Citrus lemon

V4RJM1
Uncharacterized protein



Citrus lemon

V4RJX1
40S ribosomal protein S6



Citrus lemon

V4RLB2
Uncharacterized protein



Citrus lemon

V4RMX8
Uncharacterized protein



Citrus lemon

V4RNA5
Uncharacterized protein



Citrus lemon

V4RP81
Glycosyltransferase (EC 2.4.1.—)



Citrus lemon

V4RPZ5
Adenylyl cyclase-associated protein



Citrus lemon

V4RTN9
Histone H4



Citrus lemon

V4RUZ4
Phosphoserine aminotransferase (EC 2.6.1.52)



Citrus lemon

V4RVF6
Uncharacterized protein



Citrus lemon

V4RXD4
Uncharacterized protein



Citrus lemon

V4RXG2
Uncharacterized protein



Citrus lemon

V4RYA0
Uncharacterized protein



Citrus lemon

V4RYE3
Uncharacterized protein



Citrus lemon

V4RYH3
Uncharacterized protein



Citrus lemon

V4RYX8
Uncharacterized protein



Citrus lemon

V4RZ12
Coatomer subunit beta′



Citrus lemon

V4RZ89
Uncharacterized protein



Citrus lemon

V4RZE3
Uncharacterized protein



Citrus lemon

V4RZF3
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC




1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring))




(ARD) (Fe-ARD)



Citrus lemon

V4RZM7
Uncharacterized protein



Citrus lemon

V4RZX6
Uncharacterized protein



Citrus lemon

V4S1V0
Uncharacterized protein



Citrus lemon

V4S2B6
Uncharacterized protein



Citrus lemon

V4S2N1
Uncharacterized protein



Citrus lemon

V4S2S5
Uncharacterized protein (Fragment)



Citrus lemon

V4S346
Uncharacterized protein



Citrus lemon

V4S3T8
Uncharacterized protein



Citrus lemon

V4S409
Cyanate hydratase (Cyanase) (EC 4.2.1.104) (Cyanate




hydrolase) (Cyanate lyase)



Citrus lemon

V4S4E4
Histone H2B



Citrus lemon

V4S4F6
Flavin-containing monooxygenase (EC 1.—.—.—)



Citrus lemon

V4S4J1
Uncharacterized protein



Citrus lemon

V4S4K9
Uncharacterized protein



Citrus lemon

V4S535
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4S5A8
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)



Citrus lemon

V4S5G8
Uncharacterized protein



Citrus lemon

V4S5I6
Uncharacterized protein



Citrus lemon

V4S5N4
Uncharacterized protein (Fragment)



Citrus lemon

V4S5Q3
Uncharacterized protein



Citrus lemon

V4S5X8
Uncharacterized protein



Citrus lemon

V4S5Y1
Uncharacterized protein



Citrus lemon

V4S6P4
Calcium-transporting ATPase (EC 3.6.3.8)



Citrus lemon

V4S6W0
Uncharacterized protein



Citrus lemon

V4S6W7
Uncharacterized protein (Fragment)



Citrus lemon

V4S6Y4
Uncharacterized protein



Citrus lemon

V4S773
Ribosomal protein L19



Citrus lemon

V4S7U0
Uncharacterized protein



Citrus lemon

V4S7U5
Uncharacterized protein



Citrus lemon

V4S7W4
Pyruvate kinase (EC 2.7.1.40)



Citrus lemon

V4S885
Uncharacterized protein



Citrus lemon

V4S8T3
Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8)



Citrus lemon

V4S920
Uncharacterized protein



Citrus lemon

V4S999
Uncharacterized protein



Citrus lemon

V4S9G5
Phosphoglycerate kinase (EC 2.7.2.3)



Citrus lemon

V4S9Q6
Beta-amylase (EC 3.2.1.2)



Citrus lemon

V4SA44
Serine/threonine-protein phosphatase (EC 3.1.3.16)



Citrus lemon

V4SAE0
Alpha-1,4 glucan phosphorylase (EC 2.4.1.1)



Citrus lemon

V4SAF6
Uncharacterized protein



Citrus lemon

V4SAI9
Eukaryotic translation initiation factor 3 subunit M (eIF3m)



Citrus lemon

V4SAJ5
Ribosomal protein



Citrus lemon

V4SAR3
Uncharacterized protein



Citrus lemon

V4SB37
Uncharacterized protein



Citrus lemon

V4SBI0
Elongation factor 1-alpha



Citrus lemon

V4SBI8
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)



Citrus lemon

V4SBL9
Polyadenylate-binding protein (PABP)



Citrus lemon

V4SBR1
S-formylglutathione hydrolase (EC 3.1.2.12)



Citrus lemon

V4SBR6
Uncharacterized protein



Citrus lemon

V4SCG7
Uncharacterized protein



Citrus lemon

V4SCJ2
Uncharacterized protein



Citrus lemon

V4SCQ6
Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8)



Citrus lemon

V4SDJ8
Uncharacterized protein



Citrus lemon

V4SE41
Protein DETOXIFICATION (Multidrug and toxic compound




extrusion protein)



Citrus lemon

V4SE90
Uncharacterized protein



Citrus lemon

V4SED1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit,




mitochondrial (EC 1.3.5.1)



Citrus lemon

V4SEI1
Uncharacterized protein



Citrus lemon

V4SEN9
Uncharacterized protein



Citrus lemon

V4SEX8
Uncharacterized protein



Citrus lemon

V4SF31
Uncharacterized protein



Citrus lemon

V4SF69
40S ribosomal protein S24



Citrus lemon

V4SF76
Cysteine synthase (EC 2.5.1.47)



Citrus lemon

V4SFK3
Uncharacterized protein



Citrus lemon

V4SFL4
Uncharacterized protein



Citrus lemon

V4SFW2
Uncharacterized protein



Citrus lemon

V4SGC9
Uncharacterized protein



Citrus lemon

V4SGJ4
Uncharacterized protein



Citrus lemon

V4SGN4
Uncharacterized protein



Citrus lemon

V4SGV6
Uncharacterized protein



Citrus lemon

V4SGV7
Uncharacterized protein



Citrus lemon

V4SHH1
Plasma membrane ATPase (EC 3.6.3.6) (Fragment)



Citrus lemon

V4SHI2
Uncharacterized protein



Citrus lemon

V4SHJ3
Uncharacterized protein



Citrus lemon

V4SI86
Uncharacterized protein



Citrus lemon

V4SI88
Uncharacterized protein



Citrus lemon

V4SIA2
Uncharacterized protein



Citrus lemon

V4SIC1
Phospholipase D (EC 3.1.4.4)



Citrus lemon

V4SJ14
Uncharacterized protein



Citrus lemon

V4SJ48
Uncharacterized protein



Citrus lemon

V4SJ69
Uncharacterized protein



Citrus lemon

V4SJD9
Uncharacterized protein



Citrus lemon

V4SJS7
Uncharacterized protein



Citrus lemon

V4SJT5
Uncharacterized protein



Citrus lemon

V4SKA2
Uncharacterized protein



Citrus lemon

V4SKG4
Glucose-6-phosphate isomerase (EC 5.3.1.9)



Citrus lemon

V4SKJ1
Uncharacterized protein



Citrus lemon

V4SL90
Uncharacterized protein



Citrus lemon

V4SLC6
Proteasome subunit beta type (EC 3.4.25.1)



Citrus lemon

V4SLI7
Uncharacterized protein



Citrus lemon

V4SLQ6
Uncharacterized protein



Citrus lemon

V4SMD8
Uncharacterized protein



Citrus lemon

V4SMN7
Uncharacterized protein



Citrus lemon

V4SMV5
Uncharacterized protein



Citrus lemon

V4SN00
Uncharacterized protein



Citrus lemon

V4SNA9
Uncharacterized protein



Citrus lemon

V4SNC1
Uncharacterized protein



Citrus lemon

V4SNC4
Aconitate hydratase (Aconitase) (EC 4.2.1.3)



Citrus lemon

V4SNZ3
Uncharacterized protein



Citrus lemon

V4SP86
Uncharacterized protein



Citrus lemon

V4SPM1
40S ribosomal protein S12



Citrus lemon

V4SPW4
40S ribosomal protein S4



Citrus lemon

V4SQ71
Uncharacterized protein



Citrus lemon

V4SQ89
Uncharacterized protein



Citrus lemon

V4SQ92
Uncharacterized protein



Citrus lemon

V4SQC7
Peroxidase (EC 1.11.1.7)



Citrus lemon

V4SQG3
Uncharacterized protein



Citrus lemon

V4SR15
Uncharacterized protein



Citrus lemon

V4SRN3
Transmembrane 9 superfamily member



Citrus lemon

V4SS09
Uncharacterized protein



Citrus lemon

V4SS11
Uncharacterized protein



Citrus lemon

V4SS50
Uncharacterized protein



Citrus lemon

V4SSB6
Uncharacterized protein



Citrus lemon

V4SSB8
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4SSL7
Uncharacterized protein



Citrus lemon

V4SSQ1
Uncharacterized protein



Citrus lemon

V4SST6
Uncharacterized protein



Citrus lemon

V4SSW9
Uncharacterized protein



Citrus lemon

V4SSX5
Uncharacterized protein



Citrus lemon

V4SU82
Uncharacterized protein



Citrus lemon

V4SUD3
Uncharacterized protein



Citrus lemon

V4SUL7
Uncharacterized protein



Citrus lemon

V4SUP3
Uncharacterized protein



Citrus lemon

V4SUT4
UDP-glucose 6-dehydrogenase (EC 1.1.1.22)



Citrus lemon

V4SUY5
Uncharacterized protein



Citrus lemon

V4SV60
Serine/threonine-protein phosphatase (EC 3.1.3.16)



Citrus lemon

V4SV61
Uncharacterized protein



Citrus lemon

V4SVI5
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4SVI6
Uncharacterized protein



Citrus lemon

V4SW04
Uncharacterized protein (Fragment)



Citrus lemon

V4SWD9
Uncharacterized protein



Citrus lemon

V4SWJ0
40S ribosomal protein S3a



Citrus lemon

V4SWQ9
Uncharacterized protein



Citrus lemon

V4SWR9
Uncharacterized protein



Citrus lemon

V4SWU9
Fructose-bisphosphate aldolase (EC 4.1.2.13)



Citrus lemon

V4SX11
Uncharacterized protein



Citrus lemon

V4SX99
Uncharacterized protein



Citrus lemon

V4SXC7
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4SXQ5
Uncharacterized protein



Citrus lemon

V4SXW1
Beta-adaptin-like protein



Citrus lemon

V4SXY9
Uncharacterized protein



Citrus lemon

V4SY74
Uncharacterized protein



Citrus lemon

V4SY90
Uncharacterized protein



Citrus lemon

V4SY93
Uncharacterized protein



Citrus lemon

V4SYH9
Uncharacterized protein



Citrus lemon

V4SYK6
Uncharacterized protein



Citrus lemon

V4SZ03
Uncharacterized protein



Citrus lemon

V4SZ73
Uncharacterized protein



Citrus lemon

V4SZI9
Uncharacterized protein



Citrus lemon

V4SZX7
Uncharacterized protein



Citrus lemon

V4T057
Ribosomal protein L15



Citrus lemon

V4T0V5
Eukaryotic translation initiation factor 3 subunit A (eIF3a)




(Eukaryotic translation initiation factor 3 subunit 10)



Citrus lemon

V4T0Y1
Uncharacterized protein



Citrus lemon

V4T1Q6
Uncharacterized protein



Citrus lemon

V4T1U7
Uncharacterized protein



Citrus lemon

V4T2D9
Uncharacterized protein



Citrus lemon

V4T2M6
Tubulin beta chain



Citrus lemon

V4T3G2
Uncharacterized protein



Citrus lemon

V4T3P3
6-phosphogluconate dehydrogenase, decarboxylating (EC




1.1.1.44)



Citrus lemon

V4T3V9
Uncharacterized protein



Citrus lemon

V4T3Y6
Uncharacterized protein



Citrus lemon

V4T4H3
Uncharacterized protein



Citrus lemon

V4T4I7
Uncharacterized protein



Citrus lemon

V4T4M7
Superoxide dismutase [Cu—Zn] (EC 1.15.1.1)



Citrus lemon

V4T539
Uncharacterized protein



Citrus lemon

V4T541
Uncharacterized protein



Citrus lemon

V4T576
Uncharacterized protein



Citrus lemon

V4T5E1
Uncharacterized protein



Citrus lemon

V4T5I3
Uncharacterized protein



Citrus lemon

V4T5W7
Uncharacterized protein



Citrus lemon

V4T6T5
60S acidic ribosomal protein P0



Citrus lemon

V4T722
Uncharacterized protein



Citrus lemon

V4T785
Uncharacterized protein



Citrus lemon

V4T7E2
Uncharacterized protein



Citrus lemon

V4T7I7
Uncharacterized protein



Citrus lemon

V4T7N0
Proteasome subunit beta type (EC 3.4.25.1)



Citrus lemon

V4T7N4
Uncharacterized protein



Citrus lemon

V4T7T2
Uncharacterized protein



Citrus lemon

V4T7W5
Uncharacterized protein



Citrus lemon

V4T825
Uncharacterized protein



Citrus lemon

V4T846
Uncharacterized protein



Citrus lemon

V4T8E9
S-acyltransferase (EC 2.3.1.225) (Palmitoyltransferase)



Citrus lemon

V4T8G2
Uncharacterized protein



Citrus lemon

V4T8G9
Chorismate synthase (EC 4.2.3.5)



Citrus lemon

V4T8Y6
Uncharacterized protein



Citrus lemon

V4T8Y8
Uncharacterized protein



Citrus lemon

V4T939
Carboxypeptidase (EC 3.4.16.—)



Citrus lemon

V4T957
Uncharacterized protein



Citrus lemon

V4T998
Uncharacterized protein



Citrus lemon

V4T9B9
Uncharacterized protein



Citrus lemon

V4T9Y7
Uncharacterized protein



Citrus lemon

V4TA70
Uncharacterized protein



Citrus lemon

V4TAF6
Uncharacterized protein



Citrus lemon

V4TB09
Uncharacterized protein



Citrus lemon

V4TB32
Uncharacterized protein



Citrus lemon

V4TB89
Uncharacterized protein



Citrus lemon

V4TBN7
Phosphoinositide phospholipase C (EC 3.1.4.11)



Citrus lemon

V4TBQ3
Uncharacterized protein



Citrus lemon

V4TBS4
Uncharacterized protein



Citrus lemon

V4TBU3
Uncharacterized protein



Citrus lemon

V4TCA6
Uncharacterized protein



Citrus lemon

V4TCL3
Uncharacterized protein



Citrus lemon

V4TCS5
Pectate lyase (EC 4.2.2.2)



Citrus lemon

V4TD99
Uncharacterized protein



Citrus lemon

V4TDB5
Uncharacterized protein



Citrus lemon

V4TDI2
Uncharacterized protein



Citrus lemon

V4TDY3
Serine/threonine-protein kinase (EC 2.7.11.1)



Citrus lemon

V4TE72
Uncharacterized protein



Citrus lemon

V4TE95
Uncharacterized protein



Citrus lemon

V4TEC0
Uncharacterized protein



Citrus lemon

V4TED8
Uncharacterized protein



Citrus lemon

V4TES4
Uncharacterized protein



Citrus lemon

V4TEY9
Uncharacterized protein



Citrus lemon

V4TF24
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4TF52
Uricase (EC 1.7.3.3) (Urate oxidase)



Citrus lemon

V4TFV8
Catalase (EC 1.11.1.6)



Citrus lemon

V4TGU1
Uncharacterized protein



Citrus lemon

V4TH28
Uncharacterized protein



Citrus lemon

V4TH78
Reticulon-like protein



Citrus lemon

V4THM9
Uncharacterized protein



Citrus lemon

V4TIU2
Ribulose-phosphate 3-epimerase (EC 5.1.3.1)



Citrus lemon

V4TIW6
Uncharacterized protein



Citrus lemon

V4TIY6
Uncharacterized protein



Citrus lemon

V4TIZ5
Uncharacterized protein



Citrus lemon

V4TJ75
Uncharacterized protein



Citrus lemon

V4TJC3
Uncharacterized protein



Citrus lemon

V4TJQ9
Uncharacterized protein



Citrus lemon

V4TK29
NEDD8-activating enzyme E1 regulatory subunit



Citrus lemon

V4TL04
Uncharacterized protein



Citrus lemon

V4TLL5
Uncharacterized protein



Citrus lemon

V4TLP6
Uncharacterized protein



Citrus lemon

V4TM00
Uncharacterized protein



Citrus lemon

V4TM19
Uncharacterized protein



Citrus lemon

V4TMB7
Uncharacterized protein (Fragment)



Citrus lemon

V4TMD1
Uncharacterized protein



Citrus lemon

V4TMD6
Uncharacterized protein



Citrus lemon

V4TMV4
Uncharacterized protein



Citrus lemon

V4TN30
Uncharacterized protein



Citrus lemon

V4TN38
Uncharacterized protein



Citrus lemon

V4TNY8
Uncharacterized protein



Citrus lemon

V4TP87
Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)



Citrus lemon

V4TPM1
Homoserine dehydrogenase (HDH) (EC 1.1.1.3)



Citrus lemon

V4TQB6
Uncharacterized protein



Citrus lemon

V4TQM7
Uncharacterized protein



Citrus lemon

V4TQR2
Uncharacterized protein



Citrus lemon

V4TQV9
Uncharacterized protein



Citrus lemon

V4TS21
Proteasome subunit beta type (EC 3.4.25.1)



Citrus lemon

V4TS28
Annexin



Citrus lemon

V4TSD8
Uncharacterized protein (Fragment)



Citrus lemon

V4TSF8
Uncharacterized protein



Citrus lemon

V4TSI9
Uncharacterized protein



Citrus lemon

V4TT89
Uncharacterized protein



Citrus lemon

V4TTA0
Uncharacterized protein



Citrus lemon

V4TTR8
Uncharacterized protein



Citrus lemon

V4TTV4
Uncharacterized protein



Citrus lemon

V4TTZ7
Uncharacterized protein



Citrus lemon

V4TU54
Uncharacterized protein



Citrus lemon

V4TVB6
Uncharacterized protein



Citrus lemon

V4TVG1
Eukaryotic translation initiation factor 5A (eIF-5A)



Citrus lemon

V4TVJ4
Profilin



Citrus lemon

V4TVM6
Uncharacterized protein



Citrus lemon

V4TVM9
Uncharacterized protein



Citrus lemon

V4TVP7
Uncharacterized protein



Citrus lemon

V4TVT8
Uncharacterized protein



Citrus lemon

V4TW14
Uncharacterized protein



Citrus lemon

V4TWG9
T-complex protein 1 subunit delta



Citrus lemon

V4TWU1
Probable bifunctional methylthioribulose-1-phosphate




dehydratase/enolase-phosphatase E1 [Includes: Enolase-phosphatase




E1 (EC 3.1.3.77) (2,3-diketo-5-methylthio-1-phosphopentane




phosphatase); Methylthioribulose-1-phosphate dehydratase




(MTRu-1-P dehydratase) (EC 4.2.1.109)]



Citrus lemon

V4TWX8
Uncharacterized protein



Citrus lemon

V4TXH0
Glutamate decarboxylase (EC 4.1.1.15)



Citrus lemon

V4TXK9
Uncharacterized protein



Citrus lemon

V4TXU9
Thiamine thiazole synthase, chloroplastic (Thiazole




biosynthetic enzyme)



Citrus lemon

V4TY40
Uncharacterized protein



Citrus lemon

V4TYJ6
Uncharacterized protein



Citrus lemon

V4TYP5
60S ribosomal protein L13



Citrus lemon

V4TYP6
Uncharacterized protein



Citrus lemon

V4TYR6
Uncharacterized protein



Citrus lemon

V4TYZ8
Tubulin alpha chain



Citrus lemon

V4TZ91
Guanosine nucleotide diphosphate dissociation inhibitor



Citrus lemon

V4TZA8
Uncharacterized protein



Citrus lemon

V4TZJ1
Uncharacterized protein



Citrus lemon

V4TZK5
Uncharacterized protein



Citrus lemon

V4TZP2
Uncharacterized protein



Citrus lemon

V4TZT8
Uncharacterized protein



Citrus lemon

V4TZU3
Mitogen-activated protein kinase (EC 2.7.11.24)



Citrus lemon

V4TZU5
Dihydrolipoyl dehydrogenase (EC 1.8.1.4)



Citrus lemon

V4TZZ0
Uncharacterized protein



Citrus lemon

V4U003
Eukaryotic translation initiation factor 3 subunit K (eIF3k)




(eIF-3 p25)



Citrus lemon

V4U068
Uncharacterized protein



Citrus lemon

V4U088
Uncharacterized protein



Citrus lemon

V4U0J7
Uncharacterized protein



Citrus lemon

V4U133
Uncharacterized protein



Citrus lemon

V4U1A8
Uncharacterized protein



Citrus lemon

V4U1K1
Xylose isomerase (EC 5.3.1.5)



Citrus lemon

V4U1M1
Uncharacterized protein



Citrus lemon

V4U1V0
Uncharacterized protein



Citrus lemon

V4U1X7
Uncharacterized protein



Citrus lemon

V4U1X9
Proteasome subunit beta type (EC 3.4.25.1)



Citrus lemon

V4U251
Uncharacterized protein



Citrus lemon

V4U283
Uncharacterized protein



Citrus lemon

V4U2E4
Uncharacterized protein



Citrus lemon

V4U2F7
Uncharacterized protein



Citrus lemon

V4U2H8
Uncharacterized protein



Citrus lemon

V4U2L0
Malate dehydrogenase (EC 1.1.1.37)



Citrus lemon

V4U2L2
Uncharacterized protein



Citrus lemon

V4U2W4
V-type proton ATPase subunit C



Citrus lemon

V4U3L2
Uncharacterized protein



Citrus lemon

V4U3W8
Uncharacterized protein



Citrus lemon

V4U412
Uncharacterized protein



Citrus lemon

V4U4K2
Uncharacterized protein



Citrus lemon

V4U4M4
Uncharacterized protein



Citrus lemon

V4U4N5
Eukaryotic translation initiation factor 6 (eIF-6)



Citrus lemon

V4U4S9
Uncharacterized protein



Citrus lemon

V4U4X3
Serine hydroxymethyltransferase (EC 2.1.2.1)



Citrus lemon

V4U4Z9
Uncharacterized protein



Citrus lemon

V4U500
Uncharacterized protein



Citrus lemon

V4U5B0
Eukaryotic translation initiation factor 3 subunit E (eIF3e)




(Eukaryotic translation initiation factor 3 subunit 6)



Citrus lemon

V4U5B8
Glutathione peroxidase



Citrus lemon

V4U5R5
Citrate synthase



Citrus lemon

V4U5Y8
Uncharacterized protein



Citrus lemon

V4U6I5
ATP synthase subunit beta (EC 3.6.3.14)



Citrus lemon

V4U6Q8
Uncharacterized protein



Citrus lemon

V4U706
Uncharacterized protein



Citrus lemon

V4U717
Uncharacterized protein



Citrus lemon

V4U726
Uncharacterized protein



Citrus lemon

V4U729
Uncharacterized protein



Citrus lemon

V4U734
Serine/threonine-protein phosphatase (EC 3.1.3.16)



Citrus lemon

V4U7G7
Uncharacterized protein



Citrus lemon

V4U7H5
Uncharacterized protein



Citrus lemon

V4U7R1
Potassium transporter



Citrus lemon

V4U7R7
Mitogen-activated protein kinase (EC 2.7.11.24)



Citrus lemon

V4U833
Malic enzyme



Citrus lemon

V4U840
Uncharacterized protein



Citrus lemon

V4U8C3
Uncharacterized protein



Citrus lemon

V4U8J1
3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)



Citrus lemon

V4U8J8
T-complex protein 1 subunit gamma



Citrus lemon

V4U995
Uncharacterized protein



Citrus lemon

V4U999
Uncharacterized protein



Citrus lemon

V4U9C7
Eukaryotic translation initiation factor 3 subunit D (eIF3d)




(Eukaryotic translation initiation factor 3 subunit 7) (eIF-3-zeta)



Citrus lemon

V4U9G8
Proline iminopeptidase (EC 3.4.11.5)



Citrus lemon

V4U9L1
Uncharacterized protein



Citrus lemon

V4UA63
Phytochrome



Citrus lemon

V4UAC8
Uncharacterized protein



Citrus lemon

V4UAR4
Uncharacterized protein



Citrus lemon

V4UB30
Uncharacterized protein



Citrus lemon

V4UBK8
V-type proton ATPase subunit a



Citrus lemon

V4UBL3
Coatomer subunit alpha



Citrus lemon

V4UBL5
Uncharacterized protein (Fragment)



Citrus lemon

V4UBM0
Uncharacterized protein



Citrus lemon

V4UBZ8
Aspartate aminotransferase (EC 2.6.1.1)



Citrus lemon

V4UC72
Uncharacterized protein



Citrus lemon

V4UC97
Beta-glucosidase (EC 3.2.1.21)



Citrus lemon

V4UCE2
Uncharacterized protein



Citrus lemon

V4UCT9
Acetyl-coenzyme A synthetase (EC 6.2.1.1)



Citrus lemon

V4UCZ1
Uncharacterized protein



Citrus lemon

V4UE34
Uncharacterized protein



Citrus lemon

V4UE78
Uncharacterized protein



Citrus lemon

V4UER3
Uncharacterized protein



Citrus lemon

V4UET6
Uncharacterized protein



Citrus lemon

V4UEZ6
Uncharacterized protein



Citrus lemon

V4UFD0
Uncharacterized protein



Citrus lemon

V4UFG8
Uncharacterized protein



Citrus lemon

V4UFK1
Uncharacterized protein



Citrus lemon

V4UG68
Eukaryotic translation initiation factor 3 subunit I (eIF3i)



Citrus lemon

V4UGB0
Uncharacterized protein



Citrus lemon

V4UGH4
Uncharacterized protein



Citrus lemon

V4UGL9
Uncharacterized protein



Citrus lemon

V4UGQ0
Ubiquitinyl hydrolase 1 (EC 3.4.19.12)



Citrus lemon

V4UH00
Uncharacterized protein



Citrus lemon

V4UH48
Uncharacterized protein



Citrus lemon

V4UH77
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4UHD8
Uncharacterized protein



Citrus lemon

V4UHD9
Uncharacterized protein



Citrus lemon

V4UHF1
Uncharacterized protein



Citrus lemon

V4UHZ5
Uncharacterized protein



Citrus lemon

V4UI07
40S ribosomal protein S8



Citrus lemon

V4UI34
Eukaryotic translation initiation factor 3 subunit L (eIF3I)



Citrus lemon

V4UIF1
Uncharacterized protein



Citrus lemon

V4UIN5
Uncharacterized protein



Citrus lemon

V4UIX8
Uncharacterized protein



Citrus lemon

V4UJ12
Uncharacterized protein



Citrus lemon

V4UJ42
Uncharacterized protein



Citrus lemon

V4UJ63
Uncharacterized protein



Citrus lemon

V4UJB7
Uncharacterized protein (Fragment)



Citrus lemon

V4UJC4
Uncharacterized protein



Citrus lemon

V4UJX0
Phosphotransferase (EC 2.7.1.—)



Citrus lemon

V4UJY5
Uncharacterized protein



Citrus lemon

V4UK18
Uncharacterized protein



Citrus lemon

V4UK52
Uncharacterized protein



Citrus lemon

V4UKM9
Uncharacterized protein



Citrus lemon

V4UKS4
Uncharacterized protein



Citrus lemon

V4UKV6
40S ribosomal protein SA



Citrus lemon

V4UL30
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase




subunit beta (PFP) (EC 2.7.1.90) (6-phosphofructokinase,




pyrophosphate dependent) (PPi-PFK)




(Pyrophosphate-dependent 6-phosphofructose-1-kinase)



Citrus lemon

V4UL39
Uncharacterized protein



Citrus lemon

V4ULH9
Uncharacterized protein



Citrus lemon

V4ULL2
Uncharacterized protein



Citrus lemon

V4ULS0
Uncharacterized protein



Citrus lemon

V4UMU7
Uncharacterized protein



Citrus lemon

V4UN36
Uncharacterized protein



Citrus lemon

V4UNT5
Uncharacterized protein



Citrus lemon

V4UNW1
Uncharacterized protein



Citrus lemon

V4UP89
Uncharacterized protein



Citrus lemon

V4UPE4
Uncharacterized protein



Citrus lemon

V4UPF7
Uncharacterized protein



Citrus lemon

V4UPK0
Uncharacterized protein



Citrus lemon

V4UPX5
Uncharacterized protein



Citrus lemon

V4UQ58
Uncharacterized protein



Citrus lemon

V4UQF6
Uncharacterized protein



Citrus lemon

V4UR21
Uncharacterized protein



Citrus lemon

V4UR80
Uncharacterized protein



Citrus lemon

V4URK3
Uncharacterized protein



Citrus lemon

V4URT3
Uncharacterized protein



Citrus lemon

V4US96
Uncharacterized protein



Citrus lemon

V4USQ8
Uncharacterized protein



Citrus lemon

V4UT16
Uncharacterized protein



Citrus lemon

V4UTC6
Uncharacterized protein



Citrus lemon

V4UTC8
Uncharacterized protein



Citrus lemon

V4UTP6
Uncharacterized protein



Citrus lemon

V4UTY0
Proteasome subunit alpha type (EC 3.4.25.1)



Citrus lemon

V4UU96
Uncharacterized protein



Citrus lemon

V4UUB6
Uncharacterized protein



Citrus lemon

V4UUJ9
Aminopeptidase (EC 3.4.11.—)



Citrus lemon

V4UUK6
Uncharacterized protein



Citrus lemon

V4UV09
Uncharacterized protein



Citrus lemon

V4UV83
Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase)



Citrus lemon

V4UVJ5
Diacylglycerol kinase (DAG kinase) (EC 2.7.1.107)



Citrus lemon

V4UW03
Uncharacterized protein



Citrus lemon

V4UW04
Uncharacterized protein



Citrus lemon

V4UWR1
Uncharacterized protein



Citrus lemon

V4UWV8
Uncharacterized protein



Citrus lemon

V4UX36
Uncharacterized protein



Citrus lemon

V4V003
Uncharacterized protein



Citrus lemon

V4V0J0
40S ribosomal protein S26



Citrus lemon

V4V1P8
Uncharacterized protein



Citrus lemon

V4V4V0
Uncharacterized protein



Citrus lemon

V4V5T8
Ubiquitin-fold modifier 1



Citrus lemon

V4V600
Uncharacterized protein



Citrus lemon

V4V622
Aldehyde dehydrogenase



Citrus lemon

V4V6W1
Uncharacterized protein



Citrus lemon

V4V6Z2
Uncharacterized protein



Citrus lemon

V4V738
Uncharacterized protein



Citrus lemon

V4V8H5
Vacuolar protein sorting-associated protein 35



Citrus lemon

V4V9P6
Eukaryotic translation initiation factor 3 subunit F (eIF3f)




(eIF-3-epsilon)



Citrus lemon

V4V9V7
Clathrin heavy chain



Citrus lemon

V4V9X3
Uncharacterized protein



Citrus lemon

V4VAA3
Superoxide dismutase (EC 1.15.1.1)



Citrus lemon

V4VAF3
Uncharacterized protein



Citrus lemon

V4VBQ0
Uncharacterized protein (Fragment)



Citrus lemon

V4VCL1
Proteasome subunit beta type (EC 3.4.25.1)



Citrus lemon

V4VCZ9
Uncharacterized protein



Citrus lemon

V4VDK1
Peptidylprolyl isomerase (EC 5.2.1.8)



Citrus lemon

V4VEA1
Uncharacterized protein



Citrus lemon

V4VEB3
Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase)




(AlaRS)



Citrus lemon

V4VEE3
Glutamine synthetase (EC 6.3.1.2)



Citrus lemon

V4VFM3
Uncharacterized protein



Citrus lemon

V4VFN5
Proteasome subunit beta type (EC 3.4.25.1)



Citrus lemon

V4VGD6
Uncharacterized protein



Citrus lemon

V4VGL9
Uncharacterized protein



Citrus lemon

V4VHI6
Uncharacterized protein



Citrus lemon

V4VIP4
Uncharacterized protein



Citrus lemon

V4VJT4
Uncharacterized protein



Citrus lemon

V4VK14
Uncharacterized protein



Citrus lemon

V4VKI5
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)



Citrus lemon

V4VKP2
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.—)



Citrus lemon

V4VL73
Acyl-coenzyme A oxidase



Citrus lemon

V4VLL7
Uncharacterized protein



Citrus lemon

V4VN43
Uncharacterized protein (Fragment)



Citrus lemon

V4VQH3
Methylenetetrahydrofolate reductase (EC 1.5.1.20)



Citrus lemon

V4VTC9
Uncharacterized protein (Fragment)



Citrus lemon

V4VTT4
Uncharacterized protein



Citrus lemon

V4VTY7
Uncharacterized protein



Citrus lemon

V4VU14
Uncharacterized protein



Citrus lemon

V4VU32
Uncharacterized protein



Citrus lemon

V4VUK6
S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)



Citrus lemon

V4VVR8
Uncharacterized protein



Citrus lemon

V4VXE2
Uncharacterized protein



Citrus lemon

V4VY37
Phosphomannomutase (EC 5.4.2.8)



Citrus lemon

V4VYC0
Uncharacterized protein



Citrus lemon

V4VYV1
Uncharacterized protein



Citrus lemon

V4VZ80
Uncharacterized protein



Citrus lemon

V4VZJ7
Uncharacterized protein



Citrus lemon

V4W2P2
Alpha-mannosidase (EC 3.2.1.—)



Citrus lemon

V4W2Z9
Chloride channel protein



Citrus lemon

V4W378
Uncharacterized protein



Citrus lemon

V4W4G3
Uncharacterized protein



Citrus lemon

V4W5F1
Uncharacterized protein



Citrus lemon

V4W5N8
Uncharacterized protein



Citrus lemon

V4W5U2
Uncharacterized protein



Citrus lemon

V4W6G1
Uncharacterized protein



Citrus lemon

V4W730
Uncharacterized protein



Citrus lemon

V4W7J4
Obg-like ATPase 1



Citrus lemon

V4W7L5
Uncharacterized protein



Citrus lemon

V4W8C5
Uncharacterized protein



Citrus lemon

V4W8C9
Uncharacterized protein



Citrus lemon

V4W8D3
Uncharacterized protein



Citrus lemon

V4W951
Uncharacterized protein



Citrus lemon

V4W9F6
60S ribosomal protein L18a



Citrus lemon

V4W9G2
Uncharacterized protein (Fragment)



Citrus lemon

V4W9L3
Uncharacterized protein



Citrus lemon

V4W9Y8
Uncharacterized protein



Citrus lemon

V4WAP9
Coatomer subunit beta (Beta-coat protein)



Citrus lemon

V4WBK6
Cytochrome b-c1 complex subunit 7



Citrus lemon

V4WC15
Malic enzyme



Citrus lemon

V4WC19
Uncharacterized protein



Citrus lemon

V4WC74
Uncharacterized protein



Citrus lemon

V4WC86
Serine/threonine-protein phosphatase 2A 55 kDa regulatory




subunit B



Citrus lemon

V4WCS4
GTP-binding nuclear protein



Citrus lemon

V4WD80
Aspartate aminotransferase (EC 2.6.1.1)



Citrus lemon

V4WDK0
Uncharacterized protein



Citrus lemon

V4WDK3
ATP-dependent 6-phosphofructokinase (ATP-PFK)




(Phosphofructokinase) (EC 2.7.1.11) (Phosphohexokinase)



Citrus lemon

V4WE00
Uncharacterized protein



Citrus lemon

V4WEE3
Uncharacterized protein



Citrus lemon

V4WEN2
Uncharacterized protein



Citrus lemon

V4WG97
Autophagy-related protein



Citrus lemon

V4WGV2
Uncharacterized protein



Citrus lemon

V4WGW5
Uridine kinase (EC 2.7.1.48)



Citrus lemon

V4WHD4
Uncharacterized protein



Citrus lemon

V4WHF8
Sucrose synthase (EC 2.4.1.13)



Citrus lemon

V4WHK2
Pectinesterase (EC 3.1.1.11)



Citrus lemon

V4WHQ4
Uncharacterized protein



Citrus lemon

V4WHT6
Uncharacterized protein



Citrus lemon

V4WJ93
Uncharacterized protein



Citrus lemon

V4WJA9
Uncharacterized protein



Citrus lemon

V4WJB1
Uncharacterized protein



Citrus lemon

V9HXG3
Protein disulfide-isomerase (EC 5.3.4.1)



Citrus lemon

W8Q8K1
Putative inorganic pyrophosphatase



Citrus lemon

W8QJL0
Putative isopentenyl pyrophosphate isomerase












Grape
Accession Number
Identified Proteins





Grape
A5C5K3 (+2)
Adenosylhomocysteinase


Grape
Q9M6B5
Alcohol dehydrogenase 6


Grape
A3FA65 (+1)
Aquaporin PIP1; 3


Grape
Q0MX13 (+2)
Aquaporin PIP2; 2


Grape
A3FA69 (+4)
Aquaporin PIP2; 4


Grape
A5AFS1 (+2)
Elongation factor 1-alpha


Grape
UPI0001985702
elongation factor 2


Grape
D7T227
Enolase


Grape
D7TJ12
Enolase


Grape
A5B118 (+1)
Fructose-bisphosphate aldolase


Grape
E0CQ39
Glucose-6-phosphate isomerase


Grape
D7TW04
Glutathione peroxidase


Grape
A1YW90 (+3)
Glutathione S-transferase


Grape
A5BEW0
Histone H4


Grape
UPI00015C9A6A
HSC70-1 (heat shock cognate 70 kDa protein 1); ATP




binding isoform 1


Grape
D7FBC0 (+1)
Malate dehydrogenase


Grape
D7TBH4
Malic enzyme


Grape
A5ATB7 (+1)
Methylenetetrahydrofolate reductase


Grape
A5JPK7 (+1)
Monodehydroascorbate reductase


Grape
A5AKD8
Peptidyl-prolyl cis-trans isomerase


Grape
A5BQN6
Peptidyl-prolyl cis-trans isomerase


Grape
A5CAF6
Phosphoglycerate kinase


Grape
Q09VU3 (+1)
Phospholipase D


Grape
D7SK33
Phosphorylase


Grape
A5AQ89
Profilin


Grape
C5DB50 (+2)
Putative 2,3-bisphosphoglycerate-independent




phosphoglycerate mutase


Grape
D7TIZ5
Pyruvate kinase


Grape
A5BV65
Triosephosphate isomerase


Grapefruit
G8Z362 (+1)
(E)-beta-farnesene synthase


Grapefruit
Q5CD81
(E)-beta-ocimene synthase


Grapefruit
D0UZK1 (+2)
1,2 rhamnosyltransferase


Grapefruit
A7ISD3
1,6-rhamnosyltransferase


Grapefruit
Q80H98
280 kDa protein


Grapefruit
Q15GA4 (+2)
286 kDa polyprotein


Grapefruit
D7NHW9
2-phospho-D-glycerate hydrolase


Grapefruit
D0EAL9
349 kDa polyprotein


Grapefruit
Q9DTG5
349-kDa polyprotein


Grapefruit
O22297
Acidic cellulase


Grapefruit
Q8H986
Acidic class I chitinase


Grapefruit
D3GQL0
Aconitate hydratase 1


Grapefruit
K7N8A0
Actin


Grapefruit
A8W8Y0
Alcohol acyl transferase


Grapefruit
Q84V85
Allene oxide synthase


Grapefruit
F8WL79
Aminopeptidase


Grapefruit
Q09MG5
Apocytochrome f


Grapefruit
J7EIR8
Ascorbate peroxidase


Grapefruit
B9VRH6
Ascorbate peroxidase


Grapefruit
G9I820
Auxin-response factor


Grapefruit
J7ICW8
Beta-amylase


Grapefruit
Q8L5Q9
Beta-galactosidase


Grapefruit
A7BG60
Beta-pinene synthase


Grapefruit
C0KLD1
Beta-tubulin


Grapefruit
Q91QZ1
Capsid protein


Grapefruit
Q3SAK9
Capsid protein


Grapefruit
D2U833
Cation chloride cotransporter


Grapefruit
C3VPJ0 (+3)
Chaicone synthase


Grapefruit
D5LM39
Chloride channel protein


Grapefruit
Q9M4U0
Cinnamate 4-hydroxylase CYP73


Grapefruit
Q39627
Citrin


Grapefruit
G2XKD3
Coat protein


Grapefruit
Q3L2I6
Coat protein


Grapefruit
D5FV16
CRT/DRE binding factor


Grapefruit
Q8H6S5
CTV.2


Grapefruit
Q8H6Q8
CTV.20


Grapefruit
Q8H6Q7
CTV.22


Grapefruit
Q1I1D7
Cytochrome P450


Grapefruit
Q7Y045
Dehydrin


Grapefruit
F8WLD2
DNA excision repair protein


Grapefruit
Q09MI8
DNA-directed RNA polymerase subunit beta″


Grapefruit
D2WKC9
Ethylene response 1


Grapefruit
D2WKD2
Ethylene response sensor 1


Grapefruit
D7PVG7
Ethylene-insensitive 3-like 1 protein


Grapefruit
G3CHK8
Eukaryotic translation initiation factor 3 subunit E


Grapefruit
A9NJG4 (+3)
Fatty acid hydroperoxide lyase


Grapefruit
B8Y9B5
F-box family protein


Grapefruit
Q000W4
Fe(III)-chelate reductase


Grapefruit
Q6Q3H4
Fructokinase


Grapefruit
F8WL95
Gag-pol polyprotein


Grapefruit
Q8L5K4
Gamma-terpinene synthase, chloroplastic


Grapefruit
Q9SP43
Glucose-1-phosphate adenylyltransferase


Grapefruit
Q3HM93
Glutathione S-transferase


Grapefruit
D0VEW6
GRAS family transcription factor


Grapefruit
F8WL87
Heat shock protein


Grapefruit
H9NHK0
Hsp90


Grapefruit
Q8H6R4
Jp18


Grapefruit
G3CHK6
Leucine-rich repeat family protein


Grapefruit
B2YGX9 (+1)
Limonoid UDP-glucosyltransferase


Grapefruit
Q05KK0
MADS-box protein


Grapefruit
F8WLB4
Mechanosensitive ion channel domain-containing protein


Grapefruit
Q5CD82
Monoterpene synthase


Grapefruit
F8WLC4
MYB transcription factor


Grapefruit
A5YWA9
NAC domain protein


Grapefruit
Q09MC9
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic


Grapefruit
Q8H6R9
NBS-LRR type disease resistance protein


Grapefruit
Q8H6S0
NBS-LRR type disease resistance protein


Grapefruit
Q8H6R6
NBS-LRR type disease resistance protein


Grapefruit
J9WR93
p1a


Grapefruit
Q1X8V8
P23


Grapefruit
E7DSS0 (+4)
P23


Grapefruit
G0Z9I6
p27


Grapefruit
I3XHN0
p33


Grapefruit
B8YDL3
p33 protein


Grapefruit
B9VB22
p33 protein


Grapefruit
P87587
P346


Grapefruit
B9VB56
p349 protein


Grapefruit
I3RWW7
p349 protein


Grapefruit
B9VB20
p349 protein


Grapefruit
Q9WID7
p349 protein


Grapefruit
Q2XP16
P353


Grapefruit
O04886 (+1)
Pectinesterase 1


Grapefruit
F8WL74
Peptidyl-prolyl cis-trans isomerase


Grapefruit
Q0ZA67
Peroxidase


Grapefruit
F1CT41
Phosphoenolpyruvate carboxylase


Grapefruit
B1PBV7 (+2)
Phytoene synthase


Grapefruit
Q9ZWQ8
Plastid-lipid-associated protein, chloroplastic


Grapefruit
Q94FM1
Pol polyprotein


Grapefruit
Q94FM0
Pol polyprotein


Grapefruit
G9I825
Poly C-binding protein


Grapefruit
O64460 (+7)
Polygalacturonase inhibitor


Grapefruit
I3XHM8
Polyprotein


Grapefruit
C0STR9
Polyprotein


Grapefruit
H6U1F0
Polyprotein


Grapefruit
B8QHP8
Polyprotein


Grapefruit
I3V6C0
Polyprotein


Grapefruit
C0STS0
Polyprotein


Grapefruit
K0FGH5
Polyprotein


Grapefruit
Q3HWZ1
Polyprotein


Grapefruit
F8WLA5
PPR containing protein


Grapefruit
Q06652 (+1)
Probable phospholipid hydroperoxide glutathione




peroxidase


Grapefruit
P84177
Profilin


Grapefruit
Q09MB4
Protein ycf2


Grapefruit
A8C183
PSI reaction center subunit II


Grapefruit
A5JVP6
Putative 2b protein


Grapefruit
D0EFM2
Putative eukaryotic translation initiation factor 1


Grapefruit
Q18L98
Putative gag-pol polyprotein


Grapefruit
B5AMI9
Putative movement protein


Grapefruit
A1ECK5
Putative multiple stress-responsive zinc-finger protein


Grapefruit
B5AMJ0
Putative replicase polyprotein


Grapefruit
I7CYN5
Putative RNA-dependent RNA polymerase


Grapefruit
Q8RVR2
Putative terpene synthase


Grapefruit
B5TE89
Putative uncharacterized protein


Grapefruit
Q8JVF3
Putative uncharacterized protein


Grapefruit
F8WLB0
Putative uncharacterized protein ORF43


Grapefruit
A5JVP4
Putative viral replicase


Grapefruit
M1JAW3
Replicase


Grapefruit
H6VXK8
Replicase polyprotein


Grapefruit
J9UF50 (+1)
Replicase protein 1a


Grapefruit
J9RV45
Replicase protein 2a


Grapefruit
Q5EGG5
Replicase-associated polyprotein


Grapefruit
G9I823
RNA recognition motif protein 1


Grapefruit
J7EPC0
RNA-dependent RNA polymerase


Grapefruit
Q6DN67
RNA-directed RNA polymerase L


Grapefruit
A9CQM4
SEPALLATA1 homolog


Grapefruit
Q9SLS2
Sucrose synthase


Grapefruit
Q9SLV8 (+1)
Sucrose synthase


Grapefruit
Q38JC1
Temperature-induced lipocalin


Grapefruit
D0ELH6
Tetratricopeptide domain-containing thioredoxin


Grapefruit
D2KU75
Thaumatin-like protein


Grapefruit
C3VIC2
Translation elongation factor


Grapefruit
D5LY07
Ubiquitin/ribosomal fusion protein


Grapefruit
C6KI43
UDP-glucosyltransferase family 1 protein


Grapefruit
A0FKR1
Vacuolar citrate/H+ symporter


Grapefruit
Q944C8
Vacuolar invertase


Grapefruit
Q9MB46
V-type proton ATPase subunit E


Grapefruit
F8WL82
WD-40 repeat family protein



Helianthuus annuus

HanXRQChr03g0080391
Hsp90



Helianthuus annuus

HanXRQChr13g0408351
Hsp90



Helianthuus annuus

HanXRQChr13g0408441
Hsp90



Helianthuus annuus

HanXRQChr14g0462551
Hsp90



Helianthuus annuus

HanXRQChr02g0044471
Hsp70



Helianthuus annuus

HanXRQChr02g0044481
Hsp70



Helianthuus annuus

HanXRQChr05g0132631
Hsp70



Helianthuus annuus

HanXRQChr05g0134631
Hsp70



Helianthuus annuus

HanXRQChr05g0134801
Hsp70



Helianthuus annuus

HanXRQChr10g0299441
glutathione S-transferase



Helianthuus annuus

HanXRQChr16g0516291
glutathione S-transferase



Helianthuus annuus

HanXRQChr03g0091431
lactate/malate dehydrogenase



Helianthuus annuus

HanXRQChr13g0421951
lactate/malate dehydrogenase



Helianthuus annuus

HanXRQChr10g0304821
lactate/malate dehydrogenase



Helianthuus annuus

HanXRQChr12g0373491
lactate/malate dehydrogenase



Helianthuus annuus

HanXRQChr01g0031071
small GTPase superfamily, Rab type



Helianthuus annuus

HanXRQChr01g0031091
small GTPase superfamily, Rab type



Helianthuus annuus

HanXRQChr02g0050791
small GTPase superfamily, Rab type



Helianthuus annuus

HanXRQChr11g0353711
small GTPase superfamily, Rab type



Helianthuus annuus

HanXRQChr13g0402771
small GTPase superfamily, Rab type



Helianthuus annuus

HanXRQChr07g0190171
isocitrate/isopropylmalate dehydrogenase



Helianthuus annuus

HanXRQChr16g0532251
isocitrate/isopropylmalate dehydrogenase



Helianthuus annuus

HanXRQChr03g0079131
phosphoenolpyruvate carboxylase



Helianthuus annuus

HanXRQChr15g0495261
phosphoenolpyruvate carboxylase



Helianthuus annuus

HanXRQChr13g0388931
phosphoenolpyruvate carboxylase



Helianthuus annuus

HanXRQChr14g0442731
phosphoenolpyruvate carboxylase



Helianthuus annuus

HanXRQChr15g0482381
UTP--glucose-1-phosphate uridylyltransferase



Helianthuus annuus

HanXRQChr16g0532261
UTP--glucose-1-phosphate uridylyltransferase



Helianthuus annuus

HanXRQChr05g0135591
tubulin



Helianthuus annuus

HanXRQChr06g0178921
tubulin



Helianthuus annuus

HanXRQChr08g0237071
tubulin



Helianthuus annuus

HanXRQChr11g0337991
tubulin



Helianthuus annuus

HanXRQChr13g0407921
tubulin



Helianthuus annuus

HanXRQChr05g0145191
tubulin



Helianthuus annuus

HanXRQChr07g0187021
tubulin



Helianthuus annuus

HanXRQChr07g0189811
tubulin



Helianthuus annuus

HanXRQChr09g0253681
tubulin



Helianthuus annuus

HanXRQChr10g0288911
tubulin



Helianthuus annuus

HanXRQChr11g0322631
tubulin



Helianthuus annuus

HanXRQChr12g0367231
tubulin



Helianthuus annuus

HanXRQChr13g0386681
tubulin



Helianthuus annuus

HanXRQChr13g0393261
tubulin



Helianthuus annuus

HanXRQChr12g0371591
ubiquitin



Helianthuus annuus

HanXRQChr12g0383641
ubiquitin



Helianthuus annuus

HanXRQChr17g0569881
ubiquitin



Helianthuus annuus

HanXRQChr06g0171511
photosystem II HCF136, stability/assembly factor



Helianthuus annuus

HanXRQChr17g0544921
photosystem II HCF136, stability/assembly factor



Helianthuus annuus

HanXRQChr16g0526461
proteasome B-type subunit



Helianthuus annuus

HanXRQChr17g0565551
proteasome B-type subunit



Helianthuus annuus

HanXRQChr05g0149801
proteasome B-type subunit



Helianthuus annuus

HanXRQChr09g0241421
proteasome B-type subunit



Helianthuus annuus

HanXRQChr11g0353161
proteasome B-type subunit



Helianthuus annuus

HanXRQChr16g0506311
proteinase inhibitor family I3 (Kunitz)



Helianthuus annuus

HanXRQChr16g0506331
proteinase inhibitor family I3 (Kunitz)



Helianthuus annuus

HanXRQChr09g0265401
metallopeptidase (M10 family)



Helianthuus annuus

HanXRQChr09g0265411
metallopeptidase (M10 family)



Helianthuus annuus

HanXRQChr05g0154561
ATPase, AAA-type



Helianthuus annuus

HanXRQChr08g0235061
ATPase, AAA-type



Helianthuus annuus

HanXRQChr09g0273921
ATPase, AAA-type



Helianthuus annuus

HanXRQChr16g0498881
ATPase, AAA-type



Helianthuus annuus

HanXRQChr02g0058711
oxoacid dehydrogenase acyltransferase



Helianthuus annuus

HanXRQChr08g0214191
oxoacid dehydrogenase acyltransferase



Helianthuus annuus

HanXRQChr08g0208631
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr11g0331441
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr12g0371571
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr12g0383571
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr14g0446771
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr17g0539461
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr17g0548271
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr17g0569871
small GTPase superfamily, SAR1-type



Helianthuus annuus

HanXRQChr10g0311201
ATPase, V1 complex, subunit A



Helianthuus annuus

HanXRQChr12g0359711
ATPase, V1 complex, subunit A



Helianthuus annuus

HanXRQChr04g0124671
fructose-1,6-bisphosphatase



Helianthuus annuus

HanXRQChr06g0176631
fructose-1,6-bisphosphatase



Helianthuus annuus

HanXRQCPg0579861
photosystem II PsbD/D2, reaction centre



Helianthuus annuus

HanXRQChr00c0439g0574731
photosystem II PsbD/D2, reaction centre



Helianthuus annuus

HanXRQChr04g0099321
photosystem II PsbD/D2, reaction centre



Helianthuus annuus

HanXRQChr08g0210231
photosystem II PsbD/D2, reaction centre



Helianthuus annuus

HanXRQChr11g0326671
photosystem II PsbD/D2, reaction centre



Helianthuus annuus

HanXRQChr17g0549121
photosystem II PsbD/D2, reaction centre



Helianthuus annuus

HanXRQCPg0579731
photosystem II protein D1



Helianthuus annuus

HanXRQChr00c0126g0571821
photosystem II protein D1



Helianthuus annuus

HanXRQChr00c0165g0572191
photosystem II protein D1



Helianthuus annuus

HanXRQChr00c0368g0574171
photosystem II protein D1



Helianthuus annuus

HanXRQChr00c0454g0574931
photosystem II protein D1



Helianthuus annuus

HanXRQChr00c0524g0575441
photosystem II protein D1



Helianthuus annuus

HanXRQChr00c0572g0575941
photosystem II protein D1



Helianthuus annuus

HanXRQChr09g0257281
photosystem II protein D1



Helianthuus annuus

HanXRQChr11g0326571
photosystem II protein D1



Helianthuus annuus

HanXRQChr11g0327051
photosystem II protein D1



Helianthuus annuus

HanXRQChr16g0503941
photosystem II protein D1



Helianthuus annuus

HanXRQCPg0580061
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr01g0020331
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr10g0283581
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr10g0284271
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr10g0289291
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr10g0318171
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr11g0326851
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr16g0529011
photosystem II cytochrome b559



Helianthuus annuus

HanXRQChr08g0219051
chlorophyll A-B binding protein



Helianthuus annuus

HanXRQChr12g0370841
chlorophyll A-B binding protein



Helianthuus annuus

HanXRQChr02g0053151
chlorophyll A-B binding protein



Helianthuus annuus

HanXRQChr02g0053161
chlorophyll A-B binding protein



Helianthuus annuus

HanXRQCPg0580051
cytochrome f



Helianthuus annuus

HanXRQChr01g0020341
cytochrome f



Helianthuus annuus

HanXRQChr10g0283571
cytochrome f



Helianthuus annuus

HanXRQChr10g0284261
cytochrome f



Helianthuus annuus

HanXRQChr10g0289281
cytochrome f



Helianthuus annuus

HanXRQChr10g0318181
cytochrome f



Helianthuus annuus

HanXRQChr11g0326841
cytochrome f



Helianthuus annuus

HanXRQChr15g0497521
cytochrome f



Helianthuus annuus

HanXRQChr06g0163851
ribosomal protein



Helianthuus annuus

HanXRQChr09g0252071
ribosomal protein



Helianthuus annuus

HanXRQChr12g0374041
ribosomal protein



Helianthuus annuus

HanXRQChr04g0128141
ribosomal protein



Helianthuus annuus

HanXRQChr05g0163131
ribosomal protein



Helianthuus annuus

HanXRQChr03g0076971
ribosomal protein



Helianthuus annuus

HanXRQChr05g0159851
ribosomal protein



Helianthuus annuus

HanXRQChr05g0159971
ribosomal protein



Helianthuus annuus

HanXRQChr11g0324631
ribosomal protein



Helianthuus annuus

HanXRQChr13g0408051
ribosomal protein



Helianthuus annuus

HanXRQChr03g0089331
ribosomal protein



Helianthuus annuus

HanXRQChr13g0419951
ribosomal protein



Helianthuus annuus

HanXRQChr15g0497041
ribosomal protein



Helianthuus annuus

HanXRQChr16g0499761
ribosomal protein



Helianthuus annuus

HanXRQChr04g0106961
ribosomal protein



Helianthuus annuus

HanXRQChr06g0175811
ribosomal protein



Helianthuus annuus

HanXRQChr04g0122771
ribosomal protein



Helianthuus annuus

HanXRQChr09g0245691
ribosomal protein



Helianthuus annuus

HanXRQChr16g0520021
ribosomal protein



Helianthuus annuus

HanXRQChr03g0060471
ribosomal protein



Helianthuus annuus

HanXRQChr14g0429531
ribosomal protein



Helianthuus annuus

HanXRQChr06g0171911
ribosomal protein



Helianthuus annuus

HanXRQChr15g0479091
ribosomal protein



Helianthuus annuus

HanXRQChr15g0479101
ribosomal protein



Helianthuus annuus

HanXRQChr17g0543641
ribosomal protein



Helianthuus annuus

HanXRQChr17g0543661
ribosomal protein



Helianthuus annuus

HanXRQChr04g0105831
ribosomal protein



Helianthuus annuus

HanXRQChr09g0258341
ribosomal protein



Helianthuus annuus

HanXRQChr10g0287141
ribosomal protein



Helianthuus annuus

HanXRQChr15g0463911
ribosomal protein



Helianthuus annuus

HanXRQChr03g0076171
ribosomal protein



Helianthuus annuus

HanXRQChr05g0159291
ribosomal protein



Helianthuus annuus

HanXRQChr13g0407551
ribosomal protein



Helianthuus annuus

HanXRQChr12g0380701
ribosomal protein



Helianthuus annuus

HanXRQChr15g0477271
ribosomal protein



Helianthuus annuus

HanXRQChr17g0545211
ribosomal protein



Helianthuus annuus

HanXRQChr17g0570741
ribosomal protein



Helianthuus annuus

HanXRQChr17g0570761
ribosomal protein



Helianthuus annuus

HanXRQChr02g0044021
ribosomal protein



Helianthuus annuus

HanXRQChr05g0152871
ribosomal protein



Helianthuus annuus

HanXRQChr01g0012781
ribosomal protein



Helianthuus annuus

HanXRQChr08g0230861
ribosomal protein



Helianthuus annuus

HanXRQChr13g0391831
ribosomal protein



Helianthuus annuus

HanXRQChr11g0337791
bifunctional trypsin/alpha-amylase inhibitor



Helianthuus annuus

HanXRQChr10g0312371
2-oxoacid dehydrogenase acyltransferase



Helianthuus annuus

HanXRQChr09g0276191
acid phosphatase (class B)



Helianthuus annuus

HanXRQChr05g0142271
aldose-1-epimerase



Helianthuus annuus

HanXRQChr14g0439791
alpha-D-phosphohexomutase



Helianthuus annuus

HanXRQChr09g0251071
alpha-L-fucosidase



Helianthuus annuus

HanXRQChr05g0147371
annexin



Helianthuus annuus

HanXRQChr09g0247561
Asp protease (Peptidase family A1)



Helianthuus annuus

HanXRQChr13g0409681
berberine-bridge enzyme (S)-reticulin: oxygen oxido-reductase



Helianthuus annuus

HanXRQChr10g0295971
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase



Helianthuus annuus

HanXRQChr13g0412571
carbohydrate esterase family 13 - CE13 (pectin acylesterase - PAE)



Helianthuus annuus

HanXRQChr12g0360101
carbohydrate esterase family 8 - CE8 (pectin methylesterase - PME)



Helianthuus annuus

HanXRQChr01g0019231
carbonic anhydrase



Helianthuus annuus

HanXRQChr02g0036611
cellular retinaldehyde binding/alpha-tocopherol transport



Helianthuus annuus

HanXRQChr10g0313581
chaperonin Cpn60



Helianthuus annuus

HanXRQChr09g0251791
chlathrin



Helianthuus annuus

HanXRQChr11g0329811
chlorophyll A-B binding protein



Helianthuus annuus

HanXRQChr13g0398861
cobalamin (vitamin B12)-independent methionine synthase



Helianthuus annuus

HanXRQChr10g0298981
cyclophilin



Helianthuus annuus

HanXRQChr04g0103281
Cys protease (papain family)



Helianthuus annuus

HanXRQChr09g0268361
cytochrome P450



Helianthuus annuus

HanXRQChr17g0535591
dirigent protein



Helianthuus annuus

HanXRQChr03g0065901
expansin



Helianthuus annuus

HanXRQChr11g0336761
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr10g0280931
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr10g0288971
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr12g0380361
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr09g0254381
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr04g0112711
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr07g0196131
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr10g0301281
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr10g0301931
expressed protein (cupin domain, seed storage protein domain)



Helianthuus annuus

HanXRQChr13g0404461
expressed protein (cupin domain)



Helianthuus annuus

HanXRQChr01g0015821
expressed protein (DUF642)



Helianthuus annuus

HanXRQChr03g0065301
expressed protein (Gnk2-homologous domain, antifungal




protein of Ginkgo seeds)



Helianthuus annuus

HanXRQChr03g0068311
expressed protein (LRR domains)



Helianthuus annuus

HanXRQChr10g0291371
expressed protein (LRR domains)



Helianthuus annuus

HanXRQChr03g0075061
fasciclin-like arabinogalactan protein (FLA)



Helianthuus annuus

HanXRQChr08g0221961
ferritin



Helianthuus annuus

HanXRQChr09g0257521
FMN-dependent dehydrogenase



Helianthuus annuus

HanXRQChr14g0441641
fructose-bisphosphate aldolase



Helianthuus annuus

HanXRQChr10g0312621
germin



Helianthuus annuus

HanXRQChr09g0244271
glucose-methanol-choline oxidoreductase



Helianthuus annuus

HanXRQChr03g0061571
glutamate synthase



Helianthuus annuus

HanXRQChr05g0144801
glyceraldehyde 3-phosphate dehydrogenase



Helianthuus annuus

HanXRQChr17g0550211
glycerophosphoryl diester phosphodiesterase



Helianthuus annuus

HanXRQChr06g0175391
glycoside hydrolase family 16 - GH16 (endoxyloglucan




transferase)



Helianthuus annuus

HanXRQChr11g0351571
glycoside hydrolase family 17 - GH17 (beta-1,3-glucosidase)



Helianthuus annuus

HanXRQChr05g0141461
glycoside hydrolase family 18 - GH18



Helianthuus annuus

HanXRQChr09g0276721
glycoside hydrolase family 19 - GH19



Helianthuus annuus

HanXRQChr02g0046191
glycoside hydrolase family 2 - GH2



Helianthuus annuus

HanXRQChr16g0524981
glycoside hydrolase family 20 - GH20




(N-acetyl-beta-glucosaminidase)



Helianthuus annuus

HanXRQChr11g0322851
glycoside hydrolase family 27 - GH27




(alpha-galactosidase/melibiase)



Helianthuus annuus

HanXRQChr10g0293191
glycoside hydrolase family 3 - GH3



Helianthuus annuus

HanXRQChr16g0511881
glycoside hydrolase family 31 - GH31 (alpha-xylosidase)



Helianthuus annuus

HanXRQChr14g0461441
glycoside hydrolase family 32 - GH32 (vacuolar invertase)



Helianthuus annuus

HanXRQChr13g0423671
glycoside hydrolase family 35 - GH35 (beta-galactosidase)



Helianthuus annuus

HanXRQChr10g0319301
glycoside hydrolase family 35 - GH35 (beta-galactosidase)



Helianthuus annuus

HanXRQChr09g0256531
glycoside hydrolase family 38 - GH38 (alpha-mannosidase)



Helianthuus annuus

HanXRQChr11g0320901
glycoside hydrolase family 5 - GH5 (glucan-1,3-beta




glucosidase)



Helianthuus annuus

HanXRQChr05g0130491
glycoside hydrolase family 51 - GH51




(alpha-arabinofuranosidase)



Helianthuus annuus

HanXRQChr10g0314191
glycoside hydrolase family 79 - GH79




(endo-beta-glucuronidase/heparanase



Helianthuus annuus

HanXRQChr13g0397411
homologous to A. thaliana PMR5 (Powdery Mildew




Resistant) (carbohydrate acylation)



Helianthuus annuus

HanXRQChr14g0444681
inhibitor family I3 (Kunitz-P family)



Helianthuus annuus

HanXRQChr14g0445181
lactate/malate dehydrogenase



Helianthuus annuus

HanXRQChr17g0564111
lectin (D-mannose)



Helianthuus annuus

HanXRQChr17g0558861
lectin (PAN-2 domain)



Helianthuus annuus

HanXRQChr02g0039251
lipase acylhydrolase (GDSL family)



Helianthuus annuus

HanXRQChr01g0000161
lipid transfer protein/trypsin-alpha amylase inhibitor



Helianthuus annuus

HanXRQChr02g0047121
mannose-binding lectin



Helianthuus annuus

HanXRQChr10g0303361
mitochondrial carrier protein



Helianthuus annuus

HanXRQChr15g0489551
multicopper oxidase



Helianthuus annuus

HanXRQChr05g0135581
neutral/alkaline nonlysosomal ceramidase



Helianthuus annuus

HanXRQChr01g0017621
nucleoside diphosphate kinase



Helianthuus annuus

HanXRQChr10g0295991
peroxidase



Helianthuus annuus

HanXRQChr13g0398251
peroxiredoxin



Helianthuus annuus

HanXRQChr11g0333171
phosphate-induced (phi) protein 1



Helianthuus annuus

HanXRQChr03g0060421
phosphodiesterase/nucleotide pyrophosphatase/phosphate




transferase



Helianthuus annuus

HanXRQChr03g0078011
phosphofructokinase



Helianthuus annuus

HanXRQChr13g0408831
phosphoglycerate kinase



Helianthuus annuus

HanXRQChr10g0286701
phosphoglycerate mutase



Helianthuus annuus

HanXRQChr06g0171591
photosystem II PsbP, oxygen evolving complex



Helianthuus annuus

HanXRQChr14g0434951
plastid lipid-associated protein/fibrillin conserved domain



Helianthuus annuus

HanXRQChr05g0146621
plastocyanin (blue copper binding protein)



Helianthuus annuus

HanXRQChr11g0330251
polyphenol oxidase



Helianthuus annuus

HanXRQChr04g0094541
proteasome A-type subunit



Helianthuus annuus

HanXRQChr03g0081271
proteasome B-type subunit



Helianthuus annuus

HanXRQChr12g0356851
purple acid phosphatase



Helianthuus annuus

HanXRQChr15g0485781
pyridoxal phosphate-dependent transferase



Helianthuus annuus

HanXRQChr11g0336791
ribosomal protein



Helianthuus annuus

HanXRQChr11g0330521
ribosomal protein



Helianthuus annuus

HanXRQChr11g0326801
ribulose bisphosphate carboxylase, large subunit



Helianthuus annuus

HanXRQChr16g0523951
ribulose-1,5-bisphosphate carboxylase small subunit



Helianthuus annuus

HanXRQChr01g0022151
S-adenosyl-L-homocysteine hydrolase



Helianthuus annuus

HanXRQChr14g0454811
S-adenosylmethionine synthetase



Helianthuus annuus

HanXRQChr04g0109991
SCP-like extracellular protein (PR-1)



Helianthuus annuus

HanXRQChr03g0072241
Ser carboxypeptidase (Peptidase family S10)



Helianthuus annuus

HanXRQChr12g0377221
Ser protease (subtilisin) (Peptidase family S8)



Helianthuus annuus

HanXRQChr02g0055581
superoxide dismutase



Helianthuus annuus

HanXRQChr15g0493261
thaumatin (PR5)



Helianthuus annuus

HanXRQChr16g0532531
transketolase



Helianthuus annuus

HanXRQChr07g0197421
translation elongation factor EFTu/EF1A



Helianthuus annuus

HanXRQChr06g0173951
translationally controlled tumour protein








Claims
  • 1. A plant messenger pack (PMP) comprising one or more exogenous polypeptides, wherein the one or more exogenous polypeptides are mammalian therapeutic agents and are encapsulated by the PMP, and wherein the exogenous polypeptides are not pathogen control agents.
  • 2. The PMP of claim 1, wherein the mammalian therapeutic agent is an enzyme.
  • 3. The PMP of claim 2, wherein the enzyme is a recombination enzyme or an editing enzyme.
  • 4. The PMP of claim 1, wherein the mammalian therapeutic agent is an antibody or an antibody fragment.
  • 5. The PMP of claim 1, wherein the mammalian therapeutic agent is an Fc fusion protein.
  • 6. The PMP of claim 1, wherein the mammalian therapeutic agent is a hormone.
  • 7. The PMP of claim 6, wherein the mammalian therapeutic agent is insulin.
  • 8. The PMP of claim 1, wherein the mammalian therapeutic agent is a peptide.
  • 9. The PMP of claim 1, wherein the mammalian therapeutic agent is a receptor agonist or a receptor antagonist.
  • 10. The PMP of any one of claims 1-9, wherein the mammalian therapeutic agent has a size of less than 100 kD.
  • 11. The PMP of claim 10, wherein the mammalian therapeutic agent has a size of less than 50 kD.
  • 12. The PMP of any one of claims 1-11, wherein the mammalian therapeutic agent has an overall charge that is neutral.
  • 13. The PMP of claim 12, wherein the mammalian therapeutic agent has been modified to have a charge that is neutral.
  • 14. The PMP of any one of claims 1-11, wherein the mammalian therapeutic agent has an overall charge that is positive.
  • 15. The PMP of any one of claims 1-11, wherein the mammalian therapeutic agent has an overall charge that is negative.
  • 16. The PMP of any one of claims 1-15, wherein the exogenous polypeptide is released from the PMP in a target cell with which the PMP is contacted.
  • 17. The PMP of claim 16, wherein the exogenous polypeptide exerts activity in the cytoplasm of the target cell.
  • 18. The PMP of claim 16, wherein the exogenous polypeptide is translocated to the nucleus of the target cell.
  • 19. The PMP of claim 18, wherein the exogenous polypeptide exerts activity in the nucleus of the target cell.
  • 20. The PMP of any one of claims 1-19, wherein uptake by a cell of the exogenous polypeptide encapsulated by the PMP is increased relative to uptake of the exogenous polypeptide not encapsulated by a PMP.
  • 21. The PMP of any one of claims 1-20, wherein the effectiveness of the exogenous polypeptide encapsulated by the PMP is increased relative to the effectiveness of the exogenous polypeptide not encapsulated by a PMP.
  • 22. The PMP of any one of claims 1-21, wherein the exogenous polypeptide comprises at least 50 amino acid residues.
  • 23. The PMP of any one of claims 1-22, wherein the exogenous polypeptide is at least 5 kD in size.
  • 24. The PMP of any one of claims 1-23, wherein the PMP comprises a purified plant extracellular vesicle (EV), or a segment or extract thereof.
  • 25. The PMP of claim 24, wherein the EV or segment or extract thereof is obtained from a citrus fruit.
  • 26. The PMP of claim 25, wherein the citrus fruit is a grapefruit or a lemon.
  • 27. A composition comprising a plurality of the PMPs of any one of claims 1-26.
  • 28. The composition of claim 27, wherein the PMPs in the composition are at a concentration effective to increase the fitness of a mammal.
  • 29. The composition of claim 27 or 28, wherein the exogenous polypeptide is at a concentration of at least 0.01, 0.1, 0.2, 0.3, 0.4, 0.5, or 1 μg polypeptide/mL.
  • 30. The composition of any one of claims 27-29, wherein at least 15% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide.
  • 31. The composition of claim 30, wherein at least 50% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide.
  • 32. The composition of claim 31, wherein at least 95% of PMPs in the plurality of PMPs encapsulate the exogenous polypeptide.
  • 33. The composition of any one of claims 27-32, wherein the composition is formulated for administration to a mammal.
  • 34. The composition of any one of claims 27-33, wherein the composition is formulated for administration to a mammalian cell.
  • 35. The composition of any one of claims 27-34, further comprising a pharmaceutically acceptable vehicle, carrier, or excipient.
  • 36. The composition of any one of claims 27-35, wherein the composition is stable for at least one day at room temperature, and/or stable for at least one week at 4° C.
  • 37. The composition of any one of claims 27-36, wherein the PMPs are stable for at least 24 hours, 48 hours, seven days, or 30 days at 4° C.
  • 38. The composition of claim 37, wherein the PMPs are further stable at a temperature of at least 20° C., 24° C., or 37° C.
  • 39. A composition comprising a plurality of PMPs, wherein each of the PMPs is a plant EV, or a segment or extract thereof, wherein each of the plurality of PMPs encapsulate an exogenous polypeptide, wherein the exogenous polypeptide is a mammalian therapeutic agent, the exogenous polypeptide is not a pathogen control agent, and the composition is formulated for delivery to an animal.
  • 40. A pharmaceutical composition comprising a composition according to any one of claims 1-26 and a pharmaceutically acceptable vehicle, carrier, or excipient.
  • 41. A method of producing a PMP comprising an exogenous polypeptide, wherein the exogenous polypeptide is a mammalian therapeutic agent, and wherein the exogenous polypeptide is not a pathogen control agent, the method comprising: (a) providing a solution comprising the exogenous polypeptide; and(b) loading the PMP with the exogenous polypeptide, wherein the loading causes the exogenous polypeptide to be encapsulated by the PMP.
  • 42. The method of claim 41, wherein the exogenous polypeptide is soluble in the solution.
  • 43. The method of claim 41 or 42, wherein the loading comprises one or more of sonication, electroporation, and lipid extrusion.
  • 44. The method of claim 43, wherein the loading comprises sonication and lipid extrusion.
  • 45. The method of claim 43, wherein the loading comprises lipid extrusion.
  • 46. The method of claim 45, wherein PMP lipids are isolated prior to lipid extrusion.
  • 47. The method of claim 46, wherein the isolated PMP lipids comprise glycosylinositol phosphorylceramides (GIPCs).
  • 48. A method for delivering a polypeptide to a mammalian cell, the method comprising: (a) providing a PMP comprising one or more exogenous polypeptides, wherein the one or more exogenous polypeptides are mammalian therapeutic agents and are encapsulated by the PMP, and wherein the exogenous polypeptides are not pathogen control agents; and(b) contacting the cell with the PMP, wherein the contacting is performed with an amount and for a time sufficient to allow uptake of the PMP by the cell.
  • 49. The method of claim 48, wherein the cell is a cell in a subject.
  • 50. The PMP, composition, pharmaceutical composition, or method of any of claims 1-49, wherein the mammal is a human.
  • 51. A method for treating diabetes, the method comprising administering to a subject in need thereof an effective amount of a composition comprising a plurality of PMPs, wherein one or more exogenous polypeptides are encapsulated by the PMP.
  • 52. The method of claim 51, wherein the administration of the plurality of PMPs lowers the blood sugar of the subject.
  • 53. The method of claim 52, wherein the exogenous polypeptide is insulin.
  • 54. The PMP, composition, pharmaceutical composition, or method of any of claims 1-53, wherein the PMP is not significantly degraded by gastric fluids.
PCT Information
Filing Document Filing Date Country Kind
PCT/US2020/028007 4/13/2020 WO 00
Provisional Applications (2)
Number Date Country
62848482 May 2019 US
62833685 Apr 2019 US