The invention disclosed herein will be understood better with reference to the following drawings of which:
Below, preferred embodiments of a porous filter cartridge in accordance with the present invention, and a manufacturing method thereof will be described in details by reference to the accompanying drawings.
A porous filter cartridge 100 (see
At the bottom part 13 of the cap 11, a bearing surface (interposing surface) 23 one level higher than the bottom surface 13a is formed in the form of a ring along the outer perimeter of the bottom surface 13a. The interposing surface 23 is the surface which comes in contact with the peripheral edge 25a of the porous filter 25, and formed flat. The bottom surface 13a is inclined so as to decrease in height with approach from the interposing surface 23 side toward the opening 15 side, which facilitates discharge of a liquid. Further, on the bottom surface 13a, for example, 6 radial walls 27 are formed radially. Each radial wall 27 protrudes from the bottom surface 13a, and it is inclined so as to decrease in height with approach from the interposing surface 23 side toward the opening 15 side at a more gentle angle than the angle of inclination of the bottom surface 13a.
In the inside of the cap 11, the porous filter 25 is held in such a state as to be mounted on the interposing surface 23 of the bottom part 13. At least on the bottom part 13 side of the inner circumferential surface 29 of the cap 11, a plurality of convex ribs 31 which protrude inwardly of the cap 11, and bend the outer perimeter end 25b of the porous filter 25 are provided at a part on the circumference of the inner circumferential surface 29. Incidentally, each corner portion of the convex ribs 31 is formed in a curved surface obtained by rounding the sharp edge of the rib. This prevents the occurrence of cracks in the porous filter 25 which comes in contact with the ribs.
The inner circumferential surface 29 of the cap 11 is formed in a tapered surface gradually decreasing in diameter toward the opening 15. The minimum diameter of the tapered surface is generally in agreement with the outer diameter D of the porous filter 25. Whereas, the convex ribs 31 extend in parallel with the inner circumferential surface 29 of the cap 11, and along the cylinder center axis of the cap 11. As a result of this, the radius of a virtual circle 33 inscribed in the protruding tips 31a (see
As shown in
Further, as apparent from examples described later, it is indicated that provision of the convex ribs 31 enables the stable insertion of the porous filter 25. Particularly, for the convex dimension t and the width w of the convex rib 31, it has been found that there are regions not causing deformation and cracks on the porous filter 25. Specifically, for a 7-mm dia porous filter 25 of saponification-treated acetyl cellulose for use in nucleic acid extraction, it is optimum that the width w falls within the range of 0.2 to 0.1 mm (1% to 4.5% of the entire circumference length of the inner circumferential surface of the cap 11), and that the convex amount t falls with the range of 0.02 to 0.1 mm (0.25% to 1.5% of the diameter D of the porous filter 31). However, the dimensions change according to the type, diameter, thickness, and the like of the membrane used.
With such dimension ranges, the shortage of the bending amount when the protrusion height of the convex rib 31 is 0.25% or less of the diameter D of the porous filter 25 is not caused. Whereas, wrinkles or fracture due to excessive bending in the case of 1.5% or more is prevented from occurring. Further, the shortage of the bending amount when the width w in the direction of circumference of the convex rib 31 is 1% or less of the entire circumference length of the inner circumferential surface of the cap 11 is not caused. Whereas, wrinkles or fracture of the outer perimeter end in the case of 4.5% or more is not caused.
Thus, for the cap 11 including the convex ribs 31, when the porous filter 25 is adsorbed and held by an adsorption pad or the like of an automatic machine, and inserted, as shown in
Then, a description will be given to one example of the method for using a porous filter cartridge 100 configured as described above.
First, as a sample solution containing nucleic acids, there is prepared a body fluid such as whole blood collected as a specimen, blood plasma, blood serum, urine, feces, sperm, or saliva, or a solution prepared from a plant (or apart thereof), an animal (or a part thereof), or a biomaterial such as a dissolved matter or homogenate thereof. These solutions are treated with an aqueous solution containing a reagent which dissolves the cell membrane, and makes nucleic acid soluble. As a result of this, the cell membrane and the nuclear membrane are dissolved, so that nucleic acids are dispersed in the aqueous solution. For example, when the sample is whole blood, guanidine hydrochloride, Triton-X100, and protease K (manufactured by SIGMA) are added thereto. In such a state, the sample is incubated at 60° C. for 10 minutes. As a result, removal of erythrocyte, removal of various proteins, dissolution of leukocyte, and dissolution of the nuclear membrane are carried out.
Thus, into an aqueous solution including nucleic acids dispersed therein, a water-soluble organic solvent such as ethanol is added, resulting in a sample solution 36. The sample solution 36 is allowed to flow from the rear end side opening 37 of the barrel 35 toward the outlet 21 at the tip of the nozzle 17 under pressure. This allows the nucleic acids in the sample solution 36 to be adsorbed on the porous filter 25.
With the pressurization method in which the sample solution 36 is applied with pressure, and is allowed to pass therethrough, as compared with a centrifugation method in which the sample solution 36 is allowed to pass therethrough by a centrifugal force, the sample solution 36 flows more toward the peripheral edge 25a of the porous filter 25. However, the peripheral edge 25a of the porous filter 25 is held in such a manner as to be compressed by the opening edge 35b of the barrel side fusion part 35a and the interposing surface 23. Therefore, the sample solution 36 will not flow around toward the side part (edge portion of the outer perimeter) of the porous filter 25. Therefore, nucleic acids of the sample solution 36 are adsorbed only on the inner part surrounded by the edge of the barrel side fusion part 35a of the porous filter 25.
Then, the nucleic acid washing buffer solution is allowed to flow under pressure from the rear end side opening 37 of the porous filter cartridge 100 toward the outlet 21 of the nozzle 17. The nucleic acid washing buffer solution has a composition which does not desorb the nucleic acids adsorbed on the porous filter 25, but desorbs impurities. It includes an aqueous solution containing a base resin and a buffer, and if required, a surfactant. The base resin is preferably a solution containing ethanol, Tris, and Triton-X100. This operation removes impurities other than nucleic acids from the porous filter 25.
At this step, the nucleic acid washing solution sufficiently flows through the portion through which the sample solution 36 flows, i.e., the portion surrounded by the edge of the barrel side fusion part 35a, of the porous filter 25. Therefore, impurities care removed without being left on the peripheral edge 25a of the porous filter 25.
Then, purified distilled water, a TE buffer, or the like is allowed to flow while applying pressure from the rear end side opening 37 toward the outlet 21. Thus, nucleic acids are desorbed and allowed to flow out from the porous filter 25. Then, the solution containing the nucleic acids which have flowed out is collected. At this step, as in the case of adsorption of nucleic acids on the porous filter 25, the purified distilled water or the like sufficiently flows through the portion which is surrounded by the edge of the barrel side fusion part 35a, and on which nucleic acids have adsorbed, of the porous filter 25. Therefore, the nucleic acids are sufficiently desorbed without being left on the peripheral edge 25a of the porous filter 25.
Thus, with the porous filter cartridge 100, when the sample solution 36 containing nucleic acids dispersed therein, the nucleic acid washing buffer, the purified distilled water, or the like is allowed to flow, the sample solution 36 or the like will not flow around toward the side part of the porous filter 25. Therefore, the following do not occur: the nucleic acids are discharged without being adsorbed on the porous filter 25; and impurities are included in the solution containing the nucleic acids collected therein. Thus, the collection efficiency of nucleic acids is also high. Whereas, when the porous filter cartridge 100 is used for filtration, a liquid will not flow around toward the side part of the porous filter 25. Therefore, inclusion of impurities into the liquid after filtration is reduced.
Then, a method for manufacturing the porous filter cartridge 100 will be described.
By reference to
First, as shown in
The adsorption pad 41, as shown in
Then, as shown in
Then, as shown in
The barrel side mold 47 includes a cylindrical core pin 51 at the position corresponding to a hollow portion 49 (see,
Then, as shown in
Then, as shown in
With the manufacturing method, preferably, in a hour after molding of the cap 11, the cap 11 (insert member 39) is inserted into the cavity 45, and the resin J is injected to mold the barrel 35. This procedure is further preferably carried out in one minute. It is known that, in molding of an organic polymer, the fabricated molded product undergoes shrinkage immediately after the completion of molding. Therefore, also in the invention, when the length of time between completion of cap molding and insertion of the cap 11 into the cavity 45 is reduced, the adhesion strength between the fusion surfaces of the cap 11 and the barrel 35 increases as compared with the case where the cap 11 which has completely undergone shrinkage after an elapse of a long time from the completion of cap molding is inserted.
Specifically, in the case where this procedure was carried out under the same manufacturing conditions, and with the same mold and molding machine, when the cap 11 was inserted in one hour after cap molding, the adhesion strength at the fusion surface of the fabricated porous membrane cartridge increased by 20% than the case where the cap 11 which had been allowed to stand for one day after cap molding, and had completely undergone shrinkage was inserted. Further, the one within one minute after cap molding increased in adhesion strength by 50%.
Incidentally, as described above, in order to insert the cap 11 into the cavity 45 in a short time after cap molding, the following procedure is preferred. Two molding machines are disposed in adjacent to each other. With the first molding machine, the cap 11 is molded. Immediately after molding of the cap 11, the cap 11 is inserted into the second molding machine to mold the porous filter cartridge 100. Alternatively, as with molding of die slide or the like, it is also acceptable that a mold is contrived, and insertion is carried out immediately after cap molding.
Thus, with the method for manufacturing the porous filter cartridge 100, after inserting the cap 11 and the porous filter 25 into the cavity 45 of the injection molding mold, the resin J is injected into the cavity 45. As a result, the close adhesion between the cap 11 and the porous filter 25 is established, so that the convex ribs 31 are embedded in the resin J by injection of the resin J. Therefore, the convex ribs 31 and the outer perimeter end bent portion of the porous filter 25 bent by the convex ribs 31 are both embedded in the resin J. Thus, the raising preventive means of the porous filter 25 and the deformed sites caused thereby are all concealed inside the resin J. This can prevent exposure of the raising preventive means and the deformed sites to the outside of the product from affecting the extraction performance in use of the product.
Then, a modified example of the convex rib 31 provided with a notch will be described.
In the convex rib 31 provided in the cap 11, as shown in
Then, the notch 57 may also be configured as shown in
Whereas, as shown in
Further, as shown in
Whereas, the foregoing configuration was assumed to be based on the structure. However, as the method for setting the porous filter 25 without raising, mention may be made of a method for controlling the suction pressure by the adsorption pad 41 as shown in
Namely, as shown in
In this state, as shown in
With the porous filter cartridge 100, there are provided convex ribs 31 which protrude inwardly of the cap 11, and bend the outer perimeter end 25b of the porous filter 25 on the bottom part 13 side of the inner circumferential surface 29 of the cap 11, and at a part on the circumference of the inner circumferential surface 29. Thus, when the porous filter 25 is adsorbed and held by the adsorption pad 41 or the like of an automatic machine, and inserted into the cap 11, the outer perimeter end 25b of the porous filter 25 is bent at the portions corresponding to the convex ribs 31. Thus, the porous filter 25 is pressed inwardly in the radial direction from the inner circumferential surface 29, and fixed.
As a result, even by vacuum breakage occurring upon suction release or backflow upon suction OFF, the porous filter 25 is not raised. Thus, it is possible to insert/fix the porous filter 25 in a predetermined position in the cap 11 without causing deviation or bending in the cap 11. This enables the stable insertion of the porous filter 25 in manufacturing of the porous filter cartridge 100 without using a specific apparatus, which can invariably impart best performances necessary for extraction.
Other than this, as a configuration for setting the porous filter 25 at the bottom part 13 of the cap 11 without causing raising thereof, mention may be made of configurations of the following Modified Examples 3 and 4.
Namely, with the configuration of Modified Example 3 shown in
Whereas, with a configuration of Modified Example 4 shown in
With the configuration of each Modified Example described above, the mold structure slightly becomes complicated, but it can be formed by the use of a slide mechanism.
Below, the extraction operation with a nucleic acid extraction apparatus, specific materials, and the like will be described in details.
The nucleic acid extraction apparatus 73 includes a moving head 75 moving up and down with respect to the porous filter cartridge 100. The moving head 75 is connected to an air pump 79 via a solenoid valve 77. Whereas, a pressure sensor 85 is disposed midway in piping 83 for connecting the pressure nozzle 81 and the solenoid valve 77. It measures the pressure in the piping 83, and the measurement results are inputted to a control unit 87.
For the porous filter cartridge 100 for use in the nucleic acid extraction apparatus 73, the porous filter 25 serves as a nucleic acid adsorbable porous membrane (referred to as a porous membrane having a nucleic acid adsorptive property). As a result of this, the following procedure can be carried out. A sample solution is injected into the porous filter cartridge 100 accommodating therein the nucleic acid adsorbable porous membrane. Then, suction is carried out from the outlet 21 side of the porous filter cartridge 100, so that the sample solution is allowed to pass therethrough. As a result, nucleic acids are adsorbed on the nucleic acid adsorbable porous membrane. Then, a washing solution and an eluate are injected to wash/elute nucleic acids.
The nucleic acid extraction apparatus 73 basically carries out extraction of nucleic acids through the extraction steps as shown in
First, in the step of
Then, in the step of
Then, in the step of
Then, in the step of
Then, a nucleic acid adsorbable solid phase (herein, the nucleic acid adsorbable porous membrane as one example) 25 included in the cartridge 100 will be described in details.
The nucleic acid adsorbable solid phase herein referred to can contain silica or a derivative thereof, diatomaceous earth, or alumina. Further, the solid phase may contain organic polymer. The organic polymer is preferably an organic polymer having a polysaccharide structure. Alternatively, the organic polymer may be acetyl cellulose or an organic polymer obtained by subjecting a mixture of acetyl celluloses having different acetyl values to a saponification treatment. The organic polymer may be regenerated cellulose. These will be described in details below.
The nucleic acid adsorbable solid phase 25 included in the cartridge 100 is basically porous enough to enable passage of nucleic acids therethrough. The surface thereof has a characteristic of adsorbing nucleic acids in the sample solution by a chemically bonding force. Thus, it is configured to hold the adsorption during washing by a washing solution, and to weaken the adsorption force of the nucleic acids during recovery by a recovering solution for release.
The nucleic acid adsorbable solid phase 25 included in the nucleic acid extraction cartridge 100 is preferably a porous solid phase adsorbing thereon nucleic acids by interaction in which an ionic bond is not substantially involved. This means non-“ionization” as a usage condition of the porous solid phase side. It is thus estimated that the nucleic acids and the porous solid phase come to attract each other by changing the polarity of environment. As a result of this, nucleic acids can be isolated and purified with excellent separation performance, and with good washing efficiency. Preferably, the nucleic acid adsorbable porous solid phase is a porous solid phase having a hydrophilic group. It is thus estimated that the hydrophilic groups of the nucleic acids and the porous solid phase come to attract each other by changing the polarity of environment.
The hydrophilic group indicates a polar group (atomic group) capable of having interaction with water, and whole groups (atomic groups) involved in adsorption of nucleic acids apply thereto. The hydrophilic group is desirably a group, of which the strength of interaction with water is at an intermediate level, (see, KAGAKU DAIJITENN, issued from Kyoritsu Shuppan, Co., Ltd., “Groups Having Not So Strong Hydrophilicity” under Section, “Hydrophilic Groups”). Examples thereof may include a hydroxyl group, a carboxyl group, a cyano group, and an oxyethylene group. A hydroxyl group is preferred.
Herein, the porous solid phase having hydrophilic groups denotes a porous solid phase in which the material forming the porous solid phase itself has hydrophilic groups, or it denotes a porous solid phase including hydrophilic groups introduced therein by treating or coating of the material forming the porous solid phase. The material forming the porous solid phase may be either of an organic substance or an inorganic substance. For example, there can be used: a porous solid phase in which the material forming the porous solid phase itself is an organic material having hydrophilic groups; a porous solid phase including hydrophilic groups introduced therein by treating a porous solid phase of an organic material having no hydrophilic group; a porous solid phase including hydrophilic groups introduced therein by coating a porous solid phase of an organic material having no hydrophilic group with a material having hydrophilic groups; a porous solid phase in which a material forming the porous solid phase itself is an inorganic material having hydrophilic groups; a porous solid phase including hydrophilic groups introduced therein by treating a porous solid phase of an inorganic material having no hydrophilic group; and a porous solid phase including hydrophilic groups introduced therein by coating a porous solid phase of an inorganic material having no hydrophilic group with a material having hydrophilic groups. However, from the viewpoint of ease of processing, it is preferable to use an organic material such as an organic polymer as the material for forming the porous solid phase.
As the porous solid phases of the material having hydrophilic groups, mention may be made of the porous solid phases of organic materials having hydroxyl groups. As the porous solid phases of organic materials having hydroxyl groups, mention may be made of porous solid phases formed with polyhydroxyethyl acrylate, polyhydroxyethyl methacrylate, polyvinyl alcohol, polyvinyl pyrrolidone, polyacrylic acid, polymethacrylic acid, polyoxyethylene, acetyl cellulose, a mixture of acetyl celluloses having different acetyl values, and the like. Particularly, it is possible to preferably use a porous solid phase of an organic material having a polysaccharide structure.
As the porous solid phase of an organic material having hydroxyl groups, preferably, it is possible to use a porous solid phase of an organic polymer including a mixture of acetyl celluloses having different acetyl values. As the mixture of acetyl celluloses having different acetyl values, there can be preferably used a mixture of triacetyl cellulose and diacetyl cellulose, a mixture of triacetyl cellulose and monoacetyl cellulose, a mixture of triacetyl cellulose, diacetyl cellulose, and monoacetyl cellulose, or a mixture of diacetyl cellulose and monoacetyl cellulose.
Particularly, a mixture of triacetyl cellulose and diacetyl cellulose can be preferably used. The mixing ratio (ratio by mass) of triacetyl cellulose and diacetyl cellulose is preferably 99:1 to 1:99, and more preferably 90:10 to 50:50.
As the further preferred organic materials having hydroxyl groups, mention may be made of surface saponified products of acetyl cellulose described in JP-A-2003-128691. The surface saponified product of acetyl cellulose is obtained by subjecting a mixture of acetyl celluloses having different acetyl values to a saponification treatment. There can be also preferably used a saponified product of a mixture of triacetyl cellulose and diacetyl cellulose, a saponified product of a mixture of triacetyl cellulose and monoacetyl cellulose, a saponified product of a mixture of triacetyl cellulose, diacetyl cellulose, and monoacetyl cellulose, and a saponified product of a mixture of diacetyl cellulose and monoacetyl cellulose. More preferably, a saponified product of a mixture of triacetyl cellulose and diacetyl cellulose is used. The mixing ratio (ratio by mass) of the mixture of triacetyl cellulose and diacetyl cellulose is preferably 99:1 to 1:99. Further preferably, the mixing ratio of the mixture of triacetyl cellulose and diacetyl cellulose is 90:10 to 50:50. In this case, it is possible to control the amount (density) of hydroxyl groups on the solid phase surface by the degree of the saponification treatment (saponification ratio). For raising the separation efficiency of nucleic acids, a larger amount (density) of hydroxyl groups is more preferred. For example, in the case of acetyl cellulose such as triacetyl cellulose, the saponification ratio (surface saponification ratio) is preferably about 5% or more, and further preferably 10% or more. Further, in order to increase the surface area of the organic polymer having hydroxyl groups, the porous solid phase of acetyl cellulose is preferably subjected to a saponification treatment. In this case, the porous solid phase may be a front-back symmetric porous membrane. However, a front-back asymmetric porous membrane can be preferably used.
The saponification treatment denotes a treatment in which acetyl cellulose is brought in contact with a saponification treatment solution (e.g., a sodium hydroxide aqueous solution). As a result of this, the portion of the acetyl cellulose, which has come in contact with the saponification treatment solution, becomes regenerated cellulose, so that hydroxyl groups are introduced therein. The regenerated cellulose thus produced is different in crystalline state and the like from natural cellulose.
Whereas, for changing the saponification ratio, it is essential only that the saponification treatment is carried out by changing the concentration of sodium hydroxide. The saponification ratio can be measured with ease by NMR, IR, or XPS (for example, it can be determined by the degree of peak reduction of a carbonyl group).
As a method for introducing hydrophilic groups into the porous solid phase of an organic material having no hydrophilic group, there is a method in which a graft polymer chain having hydrophilic groups in the polymer chain or side chain is bonded with the porous solid phase.
As the method for bonding a graft polymer chain to the porous solid phase of an organic material, there are two methods: a method in which the porous solid phase and the graft polymer chain are chemically bonded with each other; and a method in which a compound having a polymerizable double bond is polymerized with the porous solid phase as a starting point, to form a graft polymer chain.
First, with the method for adhering the graft polymer chain to the porous solid phase through chemical bonding, a polymer having a functional group reacting with the porous solid phase in the end or side chain of the polymer is used. This functional group and the functional group of the porous solid phase can be allowed to chemically react with each other, thereby to be grafted. The functional group reacting with the porous solid phase has no particular restriction so long as it can react with the functional group of the porous solid phase. Examples thereof may include a silane coupling group such as alkoxysilane, an isocyanate group, an amino group, a hydroxyl group, a carboxyl group, a sulfonic acid group, a phosphoric acid group, an epoxy group, an allyl group, a methacryloyl group, and an acryloyl group.
As a particularly useful compound as a polymer having a reactive functional group in the end or side chain of the polymer, mention may be made of a polymer having a trialkoxy silyl group at the polymer end, a polymer having an amino group at the polymer end, a polymer having a carboxyl group at the polymer end, a polymer having an epoxy group at the polymer end, or a polymer having an isocyanate group at the polymer end. The polymer used at this step has no particular restriction so long as it has a hydrophilic group involved in adsorption of nucleic acids. Specifically, mention may be made of polyhydroxyethyl acrylate, polyhydroxyethyl methacrylate, and salts thereof, polyvinyl alcohol, polyvinyl pyrrolidone, polyacrylic acid, polymethacrylic acid, and salts thereof, polyoxyethylene, or the like.
The method for polymerizing a compound having a polymerizable double bond with the porous solid phase as a starting point, and forming a graft polymer chain is generally referred to as surface graft polymerization. The surface graft polymerization method indicates the following method. Namely, an active species is provided on the base material surface by a method such as plasma irradiation, light irradiation, or heating. Thus, the compound having a polymerizable double bond, and arranged so as to come in contact with the porous solid phase is bonded with the porous solid phase by the polymerization.
A compound useful for forming the graft polymer chain bonded to the base material is required to have both the two characteristics of having a polymerizable double bond and having a hydrophilic group involved in the adsorption of nucleic acids. As such a compound, any of the compounds of polymer, oligomer, and monomer having hydrophilic groups, may be used so long as it has a double bond in the molecule. A particularly useful compound is a monomer having a hydrophilic group.
Specific examples of the particularly useful monomer having a hydrophilic group may include the following monomers. For example, a monomer containing a hydroxyl group such as 2-hydroxyethyl acrylate, 2-hydroxyethyl methacrylate, or glycerol monomethacrylate can be in particular preferably used. Further, a monomer containing a carboxyl group such as acrylic acid or methacrylic acid, or an alkali metal salt thereof or an amine salt thereof can also be preferably used.
As another method for introducing a hydrophilic group into the porous solid phase of an organic material having no hydrophilic group, a material having a hydrophilic group can be coated. The material for use in coating has no particular restriction so long as it has a hydrophilic group involved in the adsorption of nucleic acids. However, from the viewpoint of ease of operation, a polymer of an organic material is preferred. As the polymers, mention may be made of polyhydroxyethyl acrylate, polyhydroxyethyl methacrylate, and salts thereof, polyvinyl alcohol, polyvinyl pyrrolidone, polyacrylic acid, polymethacrylic acid, and salts thereof, polyoxyethylene, acetyl celluloses, a mixture of acetyl celluloses having different acetyl values, or the like. However, a polymer having a polysaccharide structure is preferred.
Further, the following procedure can also be carried out. On the porous solid phase of an organic material having no hydrophilic group, acetyl cellulose or a mixture of acetyl celluloses having different acetyl values is coated. Then, the coated acetyl celluloses or mixture of acetyl celluloses having different acetyl values is subjected to a saponification treatment. In this case, the saponification ratio is preferably about 5% or more, and further preferably about 10% or more.
As the porous solid phase of an inorganic material having a hydrophilic group, as described above, mention may be made of a porous solid phase containing silica or a derivative thereof, diatomaceous earth, or alumina. As the porous solid phase containing a silica compound, mention may be made of a glass filter. Further, mention may be made of a porous silica thin membrane as described in Japanese Patent No. 3058342. The porous silica thin membrane can be produced in the following manner. A developing solution of a cation type amphiphilic material having a bimolecular membrane formability is developed on a substrate. Then, a solvent is removed from the solution membrane on the substrate, thereby to prepare a multilayer bimolecular thin membrane of the amphiphilic material. Thus, the multilayer bimolecular thin membrane is brought in contact with a solution containing a silica compound, followed by extraction and removal of the multilayer bimolecular thin membrane.
As a method for introducing a hydrophilic group into a porous solid phase of an inorganic material having no hydrophilic group, there are two methods: a method in which the porous solid phase is chemically bonded with a graft polymer chain; and a method in which a graft polymer chain is polymerized with the porous solid phase as a starting point by the use of a monomer having a hydrophilic group having a double bond in the molecule.
When the porous solid phase is attached to the graft polymer chain by chemical bonding, a functional group which reacts with the functional group at the end of the graft polymer chain is introduced into the inorganic material, and the graft polymer is chemically bonded thereto. Whereas, when the graft polymer chain is polymerized with the porous solid phase as a starting point by the use of a monomer having a hydrophilic group having a double bond in the molecule, a functional group serving as the starting point for polymerizing the compound having a double bond is introduced into the inorganic material.
As the graft polymer having a hydrophilic group and the monomer having a hydrophilic group having a double bond in the molecule, it is possible to preferably use the graft polymer having a hydrophilic group, and the monomer having a hydrophilic group having a double bond in the molecule, described in the method in which the porous solid phase of the organic material having no hydrophilic group is chemically bonded with the graft polymer chain.
As another method for introducing a hydrophilic group into the porous solid phase of the inorganic material having no hydrophilic group, a material having a hydrophilic group can be coated. The material for use in coating has no particular restriction so long as it has a hydrophilic group involved in the adsorption of nucleic acids. However, from the viewpoint of ease of operation, a polymer of an organic material is preferred. As the polymers, mention may be made of polyhydroxyethyl acrylate, polyhydroxyethyl methacrylate, and salts thereof, polyvinyl alcohol, polyvinyl pyrrolidone, polyacrylic acid, polymethacrylic acid, and salts thereof, polyoxyethylene, acetyl celluloses, a mixture of acetyl celluloses having different acetyl values, or the like.
Further, the following procedure can also be carried out. On the porous solid phase of an inorganic material having no hydrophilic group, acetyl cellulose or a mixture of acetyl celluloses having different acetyl values is coated. Then, the coated acetyl celluloses or mixture of acetyl celluloses having different acetyl values is subjected to a saponification treatment. In this case, the saponification ratio is preferably about 5% or more. Further, the saponification ratio is more preferably about 10% or more.
As the porous solid phase of the inorganic material having no hydrophilic group, mention may be made of a porous solid phase produced by processing a metal such as aluminum, glass, cement, ceramics such as porcelains or new ceramics, silicon, activated carbon, or the like.
The foregoing nucleic acid adsorbable porous membrane can be in any form of a porous membrane, a nonwoven fabric, or a fabric. A solution can pass through the inside thereof. The thickness is 10 μm to 500 μm, and further preferably the thickness is 50 μm to 250 μm. A smaller thickness is more preferred in terms of the ease of washing.
The foregoing nucleic acid adsorbable porous membrane through the inside of which a solution can pass has a porosity of 50 to 95%. Further preferably, the porosity is 65 to 80%. Whereas, the bubble point is preferably 0.1 to 10 kgf/cm2 (9.8 to 980 kPa). Further preferably, the bubble point is 0.2 to 4 kgf/cm2 (19.6 to 392 kPa).
As for the foregoing nucleic acid adsorbable porous membrane through the inside of which a solution can pass, the pressure loss is preferably 0.1 to 100 kPa. This can result in uniform pressure under over pressure. Further preferably the pressure loss is 0.5 to 50 kPa. Herein, the pressure loss denotes the minimum pressure necessary for allowing water to pass per a thickness of membrane of 100 μm.
As for the foregoing nucleic acid adsorbable porous membrane through the inside of which a solution can pass, the water permeability when water is allowed to pass at 25° C. and under a pressure of 1 kg/cm2 (98 kPa) is preferably 1 to 1500 mL per minute per 1 cm2 of the membrane. Further preferably, the water permeability when water is allowed to pass at 25° C. and under a pressure of 1 kg/cm2 (98 kPa) is preferably 5 to 1000 mL per minute per 1 cm2 of the membrane.
As for the foregoing nucleic acid adsorbable porous membrane through the inside of which a solution can pass, the amount of nucleic acids to be adsorbed per 1 μg of the porous membrane is preferably 1 μg or more. Further preferably, the amount of nucleic acids to be adsorbed per 1 mg of the porous membrane is 0.9 μg or more.
The foregoing nucleic acid adsorbable porous membrane through the inside of which a solution can pass, is preferably a cellulose derivative which is not dissolved in 1 hour but dissolved in 48 hours when the square porous membrane with dimensions of 5 mm per side is immersed in 5 mL of trifluoroacetic acid. Further, it is further preferably a cellulose derivative which is dissolved in 1 hour when the square porous membrane with dimensions of 5 mm per side is immersed in 5 mL of trifluoroacetic acid, but which is not dissolved in 24 hours when immersed in 5 mL dichloromethane.
When a sample solution containing nucleic acids is allowed to pass through the nucleic acid adsorbable porous membrane, it is preferable in terms of allowing the solution to come in uniform contact with the porous membrane that the sample solution is allowed to pass from one surface to the other surface. When the sample solution containing nucleic acids is allowed to pass through the nucleic acid adsorbable porous membrane, it is preferable in terms of difficulty of clogging that the sample solution is allowed to pass from the larger pore size side to the smaller pore size side of the nucleic acid adsorbable porous membrane.
The flow rate when the sample solution containing nucleic acids is allowed to pass through the nucleic acid adsorbable porous membrane is preferably 2 to 1500 μL/sec per are of one square centimeter of the membrane for obtaining a proper contact time of the solution with the porous membrane. Too short contact time of the solution with the porous membrane cannot produce a sufficient nucleic acid extraction effect. Whereas, too long contact time is not preferred in terms of the operability. Further, the flow rate is preferably 5 to 700 μL/sec per are of one square centimeter of the membrane.
Whereas, the number of the nucleic acid adsorbable porous membranes through the inside of which a solution to be used can pass may be one. Alternatively, a plurality of these may also be used. A plurality of the nucleic acid adsorbable porous membranes may be the same or different.
A plurality of the nucleic acid adsorbable porous membranes may be a combination of a nucleic acid adsorbable porous membrane of an inorganic material and a nucleic acid adsorbable porous membrane of an organic material. For example, mention may be made of a combination of a glass filter and a porous membrane of regenerated cellulose. Alternatively, a plurality of the nucleic acid adsorbable porous membranes may be a combination of a nucleic acid adsorbable porous membrane of an inorganic material and a nucleic acid non-adsorbable porous membrane of an organic material. For example, mention may be made of a combination of a glass filter and a porous membrane of nylon or polysulfone. The membrane for use in nucleic acid extraction is generally a very thin membrane of several tens of micrometers to several hundreds of micrometers. Therefore, a porous support may be used in combination for the underside of the membrane in order to hold the membrane. In this case, it is possible to enhance the membrane strength with a combination of membrane + support.
Then, the sample solution will be described briefly.
The sample solution containing nucleic acids can be obtained from a treatment using a pretreatment solution containing at least one selected from a nucleic acid stabilizer, a chaotropic salt, a surfactant, a buffer, an antifoaming agent, and a protease as a nucleic acid solubilizing reagent. Particularly preferred is a solution obtained by adding a water-soluble organic solvent thereto.
The specimen usable in the invention has no particular restriction so long as it contains nucleic acids. For example, in the diagnosis field, compounds derived from living organisms including a body fluid such as whole blood collected, blood plasma, blood serum, urine, feces, sperm, or saliva, and an animal (or a part thereof), or biomaterials such as a plant (or a part thereof), bacterium, and virus become targets therefor. These are used as they are, or each in the form of a dissolved matter, homogenate thereof, or the like as samples.
A term “sample” means a given sample containing nucleic acids. Specifically, mention may be made of the ones described for the samples. The number of types of nucleic acids in a sample solution may be one, or two or more. The length of individual nucleic acid to be subjected to the nucleic acid separation and purification method has no particular restriction. For example, a nucleic acid having a given length of several base pairs to several billion base pairs is acceptable. From the viewpoint of handling, the length of nucleic acid is preferably about several base pairs to several hundreds of kilo base pairs.
In the invention, the “nucleic acid” may be either of single stranded or double stranded DNA or RNA, and has no restriction on the molecular weight.
The sample is preferably obtained in the following manner. A cell membrane, a nuclear membrane, and the like are dissolved, so that nucleic acids are dispersed in an aqueous solution, resulting in a sample solution containing nucleic acids.
Whether there is a to-be-treated cartridge or not is confirmed by the foregoing nucleic acid extraction apparatus. Thus, nucleic acid extraction is carried out on the cartridge distinguished as the to-be-treated cartridge. The results are described below.
(1) Formation of Nucleic Acid Separation and Purification Container
A cartridge (a container for nucleic acid purification) with an internal diameter of 7 mm and for accommodating therein a solid phase for nucleic acid adsorption, is formed with polypropylene.
(2) Nucleic Acid Separation and Purification Unit)
As the nucleic acid adsorbable porous membrane, a porous membrane of acetyl cellulose is used. Then, it is accommodated in a nucleic acid adsorbable porous membrane accommodating part of the nucleic acid purification cartridge formed in the item (1). The porous membrane used has an average pore size of 2 μm.
(3) Preparation of DNA Solubilizing Reagent and Washing Solution.
The DNA solubilizing reagent and washing solution of the formulations of Table 1 are prepared.
(4) Nucleic Acid Purification Operation λDNA (manufactured by Clontech Co.) was dissolved in an amount of 5 μm in 100 μl of TE buffer, resulting in a DNA aqueous solution. To this, 100 μl of a DNA solubilizing reagent with the formulation shown in Table 1 was added and stirred.
After stirring, 800 μl of ethanol with various concentrations shown in Table 2 was added and stirred. Then, the particle diameter of nucleic acid particles of the nucleic acid-containing reagent treated as described above were measured by means of a dynamic light scattering photometer (DLS7000). The measurement results are shown in Table 3.
After measurement, the nucleic acid-containing sample treated as described above was injected into the cartridge having the nucleic acid adsorbable porous membrane of an organic polymer including a mixture of acetyl cellulose formed in the items (1) and (2). Subsequently, compressed air feeding mechanism was coupled with the cartridge to feed a compressed air, so that the inside of the cartridge was put under pressure. This causes the sample solution containing the injected nucleic acid-containing sample to pass through the nucleic acid adsorbable porous membrane. Thus, the sample solution was brought in contact with the nucleic acid adsorbable porous membrane, and discharged from the cartridge. Subsequently, the washing solution shown in Table 1 is injected into the cartridge. Then, in the same manner as described above, compressed air was fed from the compressed air feeding mechanism for pressurization. This causes the injected washing solution to pass through the nucleic acid adsorbable porous membrane and to be discharged therefrom for washing. Subsequently, a collection solution is injected into the cartridge. Then, in the same manner as described above, compressed air was fed from the compressed air feeding mechanism for pressurization. This causes the injected collection solution to pass through the nucleic acid adsorbable porous membrane and to be discharged therefrom. Then, the solution was collected in a collection container.
(5) Identification of Separation and Purification of DNA
The 260 nm absorption spectrum of the collection solution was measured to determined the yield of DNA. The measurement results are shown in Table 4. Further, each liquid passage time at that time is shown in Table 5.
Incidentally, in the foregoing embodiments, the specific substance collection apparatus was described as the nucleic acid extraction apparatus. However, by using a protein extraction cartridge for extracting protein for the cartridge, the apparatus can also serve as a protein extraction apparatus.
Then, the convex ribs 31 with the configuration in accordance with the foregoing embodiments were actually manufactured by changing the number of ribs, the rib width, and the rib convex amount. Thus, insertion was carried out 20 times with an adsorption pad. The membrane insertion success rate at this step, and the results of visual check of the sate of the membrane are shown in Table.
As indicated from Table 6, for Examples 1, 2, 3, 4, 5, 7, 8, and 10, each membrane insertion success rate was 100%, and the state of each membrane was also good.
Whereas, as for Example 6, minute membrane cracking occurred one time, but the membrane insertion success rate was 100%. Therefore, the sample was rated as acceptable.
As for Example 9, minute membrane cracking occurred one time, but the membrane insertion success rate was 100%. Therefore, the sample was rated as acceptable.
As for Comparative Example 1, the state of the membrane was good, but the membrane insertion success rate was 75% (NG, 5 times).
Therefore, the sample was rated as failure.
As for Comparative Example 2, the membrane success rate was 100%, but wrinkles occurred (3 times) at the rib portions. Thus, the sample was rated as failure.
As for Comparative Example 3, the state of the membrane was good, but the membrane insertion success rate was 60% (NG, 8 times). Therefore, the sample was rated as failure.
As for Comparative Example 4, the membrane insertion success rate was 100%, but membrane cracking occurred two times. Therefore, the sample was rated as failure.
As for Comparative Example 5, the membrane insertion success rate was 100%, but wrinkles occurred (10 times) at the rib portions. Thus, the sample was rated as failure.
The foregoing results have indicated that a rib width w of 0.2 to 1 mm (1% to 4.5% of the total circumferential length of the inner circumferential surface of the cap 11), and a convex amount t of 0.02 to 0.1 mm (0.25% to 1.5% of the diameter D of the porous filter 31) are the optimum ranges.
The present application claims foreign priority based on Japanese Patent Application (JP 2006-269812) filed Sep. 29 of 2006, the contents of which is incorporated herein by reference.
Number | Date | Country | Kind |
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2006-269812 | Sep 2006 | JP | national |