Claims
- 1. A process for the large-scale synthesis of phosphorothioate oligonucleotides which comprises:
a) assembling an oligonucleotide bound to a solid support in the presence of acetonitrile; and b) cleaving the oligonucleotide from the solid support; characterised in that the concentration of acetonitrile is reduced to less than 10% by weight of the oligonucleotide plus solid support prior to the cleavage of the oligonucleotide from the solid support.
- 2. A process for the synthesis of phosphorothioate oligonucleotides which comprises:
a) assembling an oligonucleotide bound to a solid support in the presence of acetonitrile; b) prior to cleaving the oligonucleotide from the solid support, washing the oligonucleotide bound to a solid support with a washing regime employing one or more solvent washes; and c) cleaving the oligonucleotide from the solid support; characterised in that the final wash of the washing regime employs a solvent other than acetonitrile or dioxane.
- 3. A process according to claim 2, wherein the solvent is selected from the group consisting of aromatic hydrocarbons, aliphatic hydrocarbons, haloalkanes, esters, alcohols, amides, basic, nucleophilic solvents, polar ethers, sulphoxides, water, aqueous buffer solutions and mixtures of water and water miscible organic solvents.
- 4. A process according to claim 3, wherein the solvent is selected from the group consisting of toluene, cyclohexane, dichloromethane, ethyl acetate, methyl or ethyl propionate, C1-4 alkyl alcohols, dimethylformamide and N-methylpyrollidinone, pyridine, tri(C1-4-alkyl)amines, tetrahydrofuran, dimethylsulphoxide and aqueous sodium acetate solution.
- 5. A process for the synthesis of phosphorothioate oligonucleotides which comprises:
a) assembling an oligonucleotide bound to a solid support in the presence of acetonitrile; b) prior to cleaving the oligonucleotide from the solid support, washing the oligonucleotide bound to a solid support with a washing regime employing one or more solvent washes; and c) cleaving the oligonucleotide from the solid support; characterised in that the final wash of the washing regime employs as solvent wash a solution comprising a trialkylamine.
- 6. A process according to either of claims 4 or 5, wherein the solvent is triethylamine.
- 7. A process for the synthesis of phosphorothioate oligonucleotides comprising assembling an oligonucleotide bound to a solid support in the presence of acetonitrile; air drying the supported oligonucleotide; contacting the dried supported oligonucleotide with a trialkylamine, preferably triethylamine, for sufficient time to deprotect the oligonucleotide, and subsequently cleaving the oligonucleotide from the solid support.
- 8. A process according to any preceding claim, wherein the acetonitrile concentration is reduced to less than 5%, and especially less than about 1%, by weight of the oligonucleotide plus solid support.
- 9. A process according to any preceding claim which is operated at or above a batch size of 10 mmol of oligonucleotide.
- 10. A process for the preparation of an oligonucleotide which comprises coupling a nucleoside or oligonucleotide phosphoramidite with a nucleoside or oligonucleotide comprising a free hydroxy group supported on a solid support to form an oligonucleotide phosphite triester, characterised in that the solid support is a microporous support.
- 11. A process according to any preceding claim, wherein the solid support is an amine-functionalised support derived from supports prepared by copolymerisation of acryloyl-sarcosine methyl ester, N,N-dimethylacrylamide and bis-acryloylethylenediamine.
- 12. A process according to claim 11, wherein the amine-functionalised support comprises a primary amine functionality derived from reaction of the methyl ester group with an alkyl diamine, preferably ethylene diamine.
- 13. A process according to any preceding claim, wherein the oligonucleotide is bound to the solid support via a cleavable linker selected from the group consisting of urethane, oxalyl, succinyl, and amino-derived linkers.
- 14. A process according to any preceding claim wherein the oligonucleotide is cleaved from the solid support by contact with a cleaving reagent.
- 15. A process according to claim 14, wherein the cleavage reagent comprises methylamine, aqueous methylamine solution, liquified ammonia, gaseous ammonia or concentrated aqueous ammonia solution.
- 16. A process according to any preceding claim which is employed to prepare oligonucleotides having from 1 to 100 internucleoside linkages.
- 17. A process according to any preceding claim which is employed to prepare compounds wherein at least 50% of the internucleoside linkages are phosphorothioated.
- 18. A process according to claim 17, wherein 90 to 100% of the internucleoside linkages are phosphorothioated.
Priority Claims (1)
Number |
Date |
Country |
Kind |
0029610.3 |
May 2000 |
GB |
|
CROSS REFERENCE TO RELATED APPLICATIONS
[0001] This application is a continuation-in-part application of International Application No. PCT/GB01/05338, filed Dec. 3, 2001, which further claims priority from U.S. Ser. No. 09/740,031, filed Dec. 20, 2000. These applications, in their entirety, are incorporated herein by reference.
Continuation in Parts (1)
|
Number |
Date |
Country |
Parent |
09740031 |
Dec 2000 |
US |
Child |
10454841 |
Jun 2003 |
US |