QUANTITATION AND ARCHIVING OF GENE EXPRESSION

Information

  • Research Project
  • 2869468
  • ApplicationId
    2869468
  • Core Project Number
    R43CA081962
  • Full Project Number
    1R43CA081962-01
  • Serial Number
    81962
  • FOA Number
    PAR-98-066
  • Sub Project Id
  • Project Start Date
    5/17/1999 - 25 years ago
  • Project End Date
    5/16/2001 - 23 years ago
  • Program Officer Name
    COUCH, JENNIFER A
  • Budget Start Date
    5/17/1999 - 25 years ago
  • Budget End Date
    5/16/2000 - 24 years ago
  • Fiscal Year
    1999
  • Support Year
    1
  • Suffix
  • Award Notice Date
    5/14/1999 - 25 years ago
Organizations

QUANTITATION AND ARCHIVING OF GENE EXPRESSION

Tumor malignant cell populations frequently occupy less than 5% of the tissue volume. Laser capture microdissection (LCM) provides a means of selecting malignant cells of similar morphology, but highly sensitive and accurate methods are needed for measuring DNA content, protein and mRNA expression levels ideally all within the same small number of microdissected cells. Molecular Innovations, incorporated (MII) will develop a precise method for simultaneous measurement of gene amplification and expression from LCM cells. Precise gene measurement is accomplished through the design of specific amplification primers and probes that provide a means of normalizing measurement fluctuations due to cell number, pseudogene sequences, specimen fixation, nucleic acid extraction, RNA degradation, and PCR amplification efficiency. Extracted Nucleic Acids are bound irreversibly to a solid phase material and can be repeatedly analyzed in series for multiple genes (archiving). The first gene targets include Estrogen and Progesterone Receptors (ER and PgR) and the c-erbB-2 oncogene. These genes are well accepted as important in the clinical management of breast cancer. Our assay will provide for more precise gene expression measurement localized in the specific tissue cells relevant to the breast tumor pathology. PROPOSED COMMERCIAL APPLICATIONS: Breast cancer is a leading cause of cancer deaths in women. An improved and more precise method of detecting gene expression levels that have been shown to be of prognostic and therapeutic importance has great commercialization potential.

IC Name
NATIONAL CANCER INSTITUTE
  • Activity
    R43
  • Administering IC
    CA
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
  • Sub Project Total Cost
  • ARRA Funded
  • CFDA Code
    394
  • Ed Inst. Type
  • Funding ICs
  • Funding Mechanism
  • Study Section
    ZCA1
  • Study Section Name
  • Organization Name
    XTRANA, INC.
  • Organization Department
  • Organization DUNS
  • Organization City
    DENVER
  • Organization State
    CO
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    80220
  • Organization District
    UNITED STATES