RECOMBINANT MICROORGANISM FOR PRODUCING THREONINE AND USE THEREOF

Abstract
Provided are a recombinant microorganism for producing threonine and the use thereof in the fermentation production of threonine or a derivative thereof. A 20-30 bp segment upstream of a start codon of a gene encoding phosphoenolpyruvate carboxylase in the recombinant microorganism is replaced with a strong promoter. By means of the specific optimization of the promoter of the gene encoding phosphoenolpyruvate carboxylase and the mutation of the encoding region of the gene, the ability of the strain to synthesize threonine is significantly improved.
Description
TECHNICAL FIELD

The present invention relates to the technical field of microbial engineering, specifically to a recombinant microorganism for producing threonine and use thereof.


BACKGROUND ART

L-Threonine (chemically known as β-hydroxy-α-aminobutyric acid) has a molecular formula of C4H9NO3, a relative molecular mass of 119.12, and is an essential amino acid, mainly used in medicine, chemical reagents, food fortifiers, feed additives, etc.


In Corynebacterium glutamicum, the production of threonine from oxaloacetate requires a five-step catalytic reaction, the catalytic enzymes of which are aspartate kinase (encoded by lysC), aspartate semialdehyde dehydrogenase (encoded by asd), homoserine dehydrogenase (encoded by hom), homoserine kinase (encoded by thrB) and threonine synthase (encoded by thrC), respectively. Current reports on using Corynebacterium glutamicum to produce threonine mainly focus on the modification of the anabolic pathway of threonine, including: obtaining feedback-resistant homoserine dehydrogenase and aspartate kinase (Reinscheid D J, Eikmanns B J, Sahm H. Analysis of a Corynebacterium glutamicum hom gene coding for a feedback-resistant homoserine dehydrogenase.[J]. Journal of Bacteriology, 1991, 173(10):3228-3230; Eikmanns B J, Eggeling L, Sahm H. Molecular aspects of lysine, threonine, and isoleucine biosynthesis in Corynebacterium glutamicum.[J]. Antonie Van Leeuwenhoek, 1993, 64(2):145-163); and attenuating the coding gene glyA in the threonine utilization pathway and overexpressing the threonine export protein ThrE (Simic P, Willuhn J, Sahm H, et al. Identification of glyA (Encoding Serine Hydroxymethyltransferase) and Its Use Together with the Exporter ThrE To Increase 1-Threonine Accumulation by Corynebacterium glutamicum[J]. Applied and Environmental Microbiology, 2002, 68(7):3321-3327), etc. However, there are still few reports on the supply of precursors for threonine production.


SUMMARY OF THE INVENTION

The objective of the present invention is to provide a recombinant microorganism for producing threonine by modifying a promoter region of a gene encoding phosphoenolpyruvate carboxylase to improve the threonine-producing ability of a strain, and use of the recombinant microorganism.


Specifically, the present invention provides the following technical solutions: First, the present invention provides use of improved expression of the gene encoding phosphoenolpyruvate carboxylase (ppc) in increasing the threonine production of Corynebacterium bacteria or constructing threonine producing Corynebacterium bacteria, wherein the improved expression is achieved by replacing 20-30 bp upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase with a strong promoter.


The Corynebacterium bacteria described above are preferably Corynebacterium glutamicum.


The present invention finds that in Corynebacterium glutamicum, increasing the enzymatic activity of phosphoenolpyruvate carboxylase is beneficial to increasing the supply of oxaloacetate, a precursor of threonine synthesis, and further promoting the synthesis and accumulation of threonine. With regard to methods to increase the enzyme activity of phosphoenolpyruvate carboxylase, the present invention has conducted a large number of attempts and screenings, and unexpectedly found that replacing the specific region in the non-coding region upstream of the gene encoding phosphoenolpyruvate carboxylase with a strong promoter can significantly increase the expression quantity of phosphoenolpyruvate carboxylase. Compared to increasing the copy number of the gene, this modification method has higher stability. Moreover, compared to replacing the promoter of ppc with a stronger promoter, this modification is significantly better in improving the enzyme activity of phosphoenolpyruvate carboxylase.


Preferably, the enhanced expression is achieved by replacing 27 bp upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase with a strong promoter.


Further preferably, the strong promoter is Ptuf. The nucleotide sequence of the strong promoter Ptuf is as shown in SEQ ID NO. 4.


In order to enhance gene expression, a strong promoter is often used to replace the original promoter of the gene or directly inserted upstream of the start codon of the gene. When replacing the promoter, all the spacer sequence between the gene of interest and the upstream gene is usually replaced with a strong promoter, or the original promoter region of the gene of interest is replaced with a strong promoter. However, the present invention found that replacing the 27 bp DNA segment upstream of the start codon with a strong promoter (especially the strong promoter Ptuf) is significantly better in increasing the expression quantity of phosphoenolpyruvate carboxylase than replacing the promoter region of the gene encoding phosphoenolpyruvate carboxylase.


The 27 bp segment upstream of the start codon of the present invention means that: the first base upstream of the start codon is taken as the base at position 1 and extended upstream to the base at position 27 to obtain a DNA segment with a length of 27 bp. Taking the wild-type strain of Corynebacterium glutamicum ATCC13032 as an example, the sequence of the 27 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is as shown in SEQ ID NO.3.


The amino acid sequence of the phosphoenolpyruvate carboxylase of the present invention is shown in SEQ ID NO.1 or 2, or an amino acid sequence having at least 90% similarity to and having equivalent functions as the sequence shown in SEQ ID NO.1 or 2.


Preferably, the amino acid sequence of phosphoenolpyruvate carboxylase is as shown in SEQ ID NO. 1 or 2.


The sequence shown in SEQ ID NO.1 is the amino acid sequence of wild-type phosphoenolpyruvate carboxylase of Corynebacterium glutamicum. The sequence shown in SEQ ID NO.2 is a mutant protein (D299N) obtained by mutating the D at position 299 to N based on the wild-type phosphoenolpyruvate carboxylase of Corynebacterium glutamicum. On the basis of the above modification of the promoter region, combined with the mutation D299N of phosphoenolpyruvate carboxylase, the threonine production of the strain can be significantly improved. The amino acid sequence of phosphoenolpyruvate carboxylase is as shown in SEQ ID NO. 2.


Further, the present invention provides a recombinant microorganism, in which the 20-30 bp segment upstream of an start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter.


Preferably, a 27 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase in the recombinant microorganism is replaced with a strong promoter.


Further preferably, the strong promoter is Ptuf.


The amino acid sequence of the phosphoenolpyruvate carboxylase described above is shown in SEQ ID NO.1 or 2, or an amino acid sequence having at least 90% similarity to and having equivalent functions as the sequence shown in SEQ ID NO.1 or 2.


Preferably, the amino acid sequence of phosphoenolpyruvate carboxylase is as shown in SEQ ID NO. 1 or 2. On the basis of the above modification of the promoter region, combined with the mutation D299N of phosphoenolpyruvate carboxylase, the threonine production of the strain can be significantly improved. Therefore, it is preferable that the amino acid sequence of the phosphoenolpyruvate carboxylase of the recombinant microorganism is as shown in SEQ ID NO.2.


The recombinant microorganism described above is preferably constructed by the following method: in the original strain, the 27 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase of the original strain is replaced with a strong promoter Ptuf. Preferably, the method further comprises the step of mutating the gene encoding phosphoenolpyruvate carboxylase so that the phosphoenolpyruvate carboxylase obtains the D299N mutation.


Among them, the original strain is preferably a strain that can accumulate threonine.


Preferably, the enzyme activity of any one or more of the following enzymes (1) to (7) is enhanced and/or the feedback inhibition thereof is deregulated in the recombinant microorganism:

    • (1) aspartate kinase;
    • (2) aspartate semialdehyde dehydrogenase;
    • (3) homoserine dehydrogenase;
    • (4) threonine synthase;
    • (5) homoserine kinase;
    • (6) aspartate aminotransferase;
    • and (7) threonine export protein;


      Preferably, the threonine export protein is a threonine export protein derived from Escherichia coli.


The above-mentioned aspartate kinase, homoserine dehydrogenase, aspartate semialdehyde dehydrogenase, aspartate aminotransferase, homoserine kinase, and threonine synthase have reference sequence numbers of WP_003855724.1, WP_003854900.1, WP_011013506.1, WP_011013497.1, WP_011014183.1, and WP_011014964.1 on NCBI, respectively, or amino acid sequences with at least 90% similarity to and equivalent functions as the above-mentioned reference sequences.


The threonine export protein derived from Escherichia coli has a reference sequence number of YP_026264.1 on NCBI, or an amino acid sequence with at least 90% similarity to and equivalent function as the above reference sequence.


Preferably, the microorganism is any of the following (1) to (6):

    • (1) a microorganism in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the activity of aspartate aminotransferase is enhanced and/or the feedback inhibition thereof is deregulated;
    • (2) a microorganism in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the activity of aspartate aminotransferase, aspartate kinase and/or aspartate semialdehyde dehydrogenase is enhanced and/or the feedback inhibition thereof is deregulated;
    • (3) a microorganism in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the activity of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase and/or homoserine dehydrogenase is enhanced and/or the feedback inhibition thereof is deregulated;
    • (4) a microorganism in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the activity of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase and/or homoserine kinase is enhanced and/or the feedback inhibition thereof is deregulated;
    • (5) a microorganism in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the activity of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, homoserine kinase and/or threonine synthase is enhanced and/or the feedback inhibition thereof is deregulated;
    • (6) a microorganism in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the activity of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, homoserine kinase, threonine synthase and/or threonine export protein is enhanced and/or the feedback inhibition thereof is deregulated.


The enhancement of the activity of the above enzymes is achieved by any one selected from the following 1) to 6), or an optional combination thereof:

    • 1) enhancement by introducing a plasmid having the gene encoding the enzyme;
    • 2) enhancement by increasing the copy number of the gene encoding the enzyme on the chromosome;
    • 3) enhancement by altering the promoter sequence of the gene encoding the enzyme on the chromosome;
    • 4) enhancement by operably linking a strong promoter to the gene encoding the enzyme;
    • 5) enhancement by altering the amino acid sequence of the enzyme; and 6) enhancement by altering the nucleotide sequence encoding the enzyme.


As a preferred scheme of the present invention, the recombinant microorganism is any of the following (1)-(6):

    • (1) a microorganism in which a mutation site D299N is introduced into the phosphoenolpyruvate carboxylase and a 27 bp segment upstream of the start codon of the coding gene is replaced with a Ptuf promoter, and at the same time, the expression of aspartate aminotransferase is enhanced;
    • (2) a microorganism in which a mutation site D299N is introduced into phosphoenolpyruvate carboxylase and a 27 bp segment upstream of the start codon of the coding gene is replaced with a Ptuf promoter, and at the same time, the expression of aspartate aminotransferase, aspartate kinase, and aspartate semialdehyde dehydrogenase is enhanced, and the feedback inhibition thereof is deregulated;
    • (3) a microorganism in which a mutation site D299N is introduced into phosphoenolpyruvate carboxylase and a 27 bp segment upstream of the start codon of the coding gene is replaced with a Ptuf promoter, and at the same time, the expression of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase and homoserine dehydrogenase is enhanced, and the feedback inhibition of aspartate kinase and homoserine dehydrogenase is deregulated;
    • (4) a microorganism in which a mutation site D299N is introduced into phosphoenolpyruvate carboxylase and a 27 bp segment upstream of the start codon of the coding gene is replaced with a Ptuf promoter, and at the same time, the expression of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, and homoserine kinase is enhanced, and the feedback inhibition of aspartate kinase and homoserine dehydrogenase is deregulated;
    • (5) a microorganism in which a mutation site D299N is introduced into phosphoenolpyruvate carboxylase and a 27 bp segment upstream of the start codon of the coding gene is replaced with a Ptuf promoter, and at the same time, the expression of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, homoserine kinase and threonine synthase is enhanced, and the feedback inhibition of aspartate kinase and homoserine dehydrogenase is deregulated;
    • (6) a microorganism in which a mutation site D299N is introduced into phosphoenolpyruvate carboxylase and a 27 bp upstream of the start codon ATG of the coding gene is replaced with a Ptuf promoter, and the expression of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, homoserine kinase and threonine synthase is enhanced, the threonine export protein derived from Escherichia coli was expressed, and the feedback inhibition of aspartate kinase and homoserine dehydrogenase is deregulated.


Preferably, the above-mentioned enhanced enzyme activity or enhanced expression is achieved by replacing the original promoter of the gene with a strong promoter, or by mutating the start codon of the gene so that the amino acid at position 1 of the encoded protein is mutated from valine to methionine.


The strong promoter is preferably the promoter Psod, PcspB or Ptuf. Among them, the nucleotide sequences of promoters Psod and PcspB are as shown in SEQ ID NOs. 5 and 6, respectively.


Preferably, the enhanced expression of the gene encoding aspartate kinase and the gene encoding threonine synthase is achieved by replacing their original promoter with promoter Psod and their start codon GTG was replaced by ATG.


The enhanced expression of the gene encoding aspartate semialdehyde dehydrogenase and the gene encoding aspartate aminotransferase is achieved by replacing their original promoters with the promoter Psod.


The enhanced expression of the gene encoding homoserine dehydrogenase and the gene encoding homoserine kinase is achieved by replacing their original promoters with the promoter PcspB.


The expression of the threonine export protein of Escherichia coli can be achieved by integrating the expression cassette of the gene encoding the threonine export protein of Escherichia coli into the chromosome of the microorganism. The preferred integration site is downstream of the cg2009 gene, and the promoter of the expression cassette is Psod.


The feedback-resistant aspartate kinase described above is preferably achieved by the T311I mutation. The feedback-resistant homoserine dehydrogenase is preferably achieved by the G378E mutation.


The microorganism used to construct the recombinant microorganism described above is preferably a Corynebacterium bacterium, more preferably Corynebacterium glutamicum. Corynebacterium glutamatum includes ATCC13032, ATCC13870, ATCC13869, ATCC21799, ATCC21831, ATCC14067, ATCC13287, etc. (see NCBI Corynebacterium glutamicum evolutionary tree https://www.ncbi.nlm.nih.gov/genome/469), more preferably Corynebacterium glutamatum ATCC 13032.


The present invention further provides a method for constructing the recombinant microorganism described above, comprising: the 27 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase of the original strain is replaced with a strong promoter Ptuf.


Preferably, the method further comprises mutating the gene encoding phosphoenolpyruvate carboxylase so that the phosphoenolpyruvate carboxylase got the D299N mutation.


Further preferably, the method further comprises: enhancing the enzyme activity and/or deregulating the feedback inhibition of any one or more of the following enzymes (1) to (7):

    • (1) aspartate kinase;
    • (2) aspartate semialdehyde dehydrogenase;
    • (3) homoserine dehydrogenase;
    • (4) threonine synthase;
    • (5) homoserine kinase;
    • (6) aspartate aminotransferase;
    • and (7) threonine export protein;
    • wherein, the enhancement of the enzyme activity is achieved by any one selected from the following 1) to 6), or an optional combination thereof:
    • 1) enhancement by introducing a plasmid having the gene encoding the enzyme;
    • 2) enhancement by increasing the copy number of the gene encoding the enzyme on the chromosome;
    • 3) enhancement by altering the promoter sequence of the gene encoding the enzyme on the chromosome;
    • 4) enhancement by operably linking a strong promoter to the gene encoding the enzyme;
    • 5) enhancement by altering the amino acid sequence of the enzyme; and 6) enhancement by altering the nucleotide sequence encoding the enzyme.


The above-mentioned modification methods, including gene enhancement, are all modification methods known to those skilled in the art, see MAN, Zaiwei. Systemic pathway engineering modification of Corynebacterium crenatum to produce L-arginine with high yield [D]. Jiangnan University, 2016; CUI, Yi. Metabolic engineering modification of Corynebacterium glutamicum to produce L-leucine [D]. Tianjin University of Science and Technology; Xu Guodong. Construction of L-isoleucine producing strain and optimization of fermentation conditions. Tianjin University of Science and Technology, 2015.


The present invention provides one of the following uses of the recombinant microorganism described above:

    • (1) use in fermentation of threonine or a derivative thereof;
    • (2) use in constructing a threonine or a derivative thereof producing strain as an original strain;
    • and (3) use in increasing the production and/or yield of threonine or a derivative thereof.


The present invention further provides a method for producing threonine or a derivative thereof by fermentation, the method comprises the steps of cultivating the recombinant microorganism described above and obtaining threonine or the derivative thereof by isolating threonine or the derivative thereof from the culture.


Specifically, the above method comprises that: the recombinant microorganism is inoculated in a seed medium to obtain a seed liquid, the seed liquid is inoculated in a fermentation medium to obtain a fermentation liquid, and the fermentation liquid is separated and extracted to obtain threonine or a derivative thereof.


Preferably, the fermentation medium comprises the following components: corn steep liquor 45-55 mL/L, glucose 25-35 g/L, ammonium sulfate 3-5 g/L, MOPS 25-35 g/L, potassium dihydrogen phosphate 8-12 g/L, urea 15-25 g/L, biotin 8-12 mg/L, magnesium sulfate 5-7 g/L, ferrous sulfate 0.5-1.5 g/L, VB1·HCl 35-45 mg/L, calcium pantothenate 45-55 mg/L, nicotinamide 35-45 mg/L, manganese sulfate 0.5-1.5 g/L, zinc sulfate 15-25 mg/L, copper sulfate 15-25 mg/L, pH 7.0-7.2.


The beneficial effects of the present invention are as follows: the present invention significantly improved the ability of the strain to synthesize threonine by means of the specific optimization of the promoter of the gene encoding phosphoenolpyruvate carboxylase and the mutation of the encoding region of the gene, and the threonine production is increased by 25-40% compared to the strain without the above modification. The above modification method can be applied to the construction of threonine-producing strains and fermentative production of threonine, and has good application value.







DETAILED DESCRIPTION OF EMBODIMENTS

The following examples are intended to illustrate the present invention but are not intended to limit the scope of the present invention.


The present invention focuses on investigating the impact of modification of the promoter region of phosphoenolpyruvate carboxylase on threonine production. It has been verified that replacing 20-30 bp, preferably 27 bp, upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase with a strong promoter can significantly increase the production of threonine.


The present invention further strengthens the threonine synthesis and transport pathways of the strain, mainly including expression enhancement or deregulating of aspartate kinase, homoserine dehydrogenase, aspartate semialdehyde dehydrogenase, aspartate aminotransferase, homoserine kinase, threonine synthase, and threonine export protein. The results of the shake flasks showed that the threonine-producing ability of all threonine-producing strains was improved after the 20-30 bp upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase was replaced with a strong promoter. At the same time, compared to the strain in which only the 20-30 bp upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase was replaced with a strong promoter, the strain in which the 20-30 bp upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase was replaced with a strong promoter and the expression of enzymes involved in the threonine synthesis and transport pathways was enhanced had more advantages in the production of threonine.


Expression enhancement during the modification process includes methods such as promoter replacement, change of ribosome binding sites, increase in copy number, and plasmid overexpression, and the above means are all well known to researchers in the art. The above means cannot be exhaustive through examples, and the specific embodiments only use enhancement by promoter as a representative for illustration.


The Present Invention Adopts the Following Technical Solutions:

A first technical solution of the present invention provides a method for producing threonine by a strain in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the expression of aspartate aminotransferase is enhanced and/or deregulated.


A second technical solution of the present invention provides a method for producing threonine by a strain in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the expression of at least one of aspartate aminotransferase, aspartate kinase, and aspartate semialdehyde dehydrogenase is enhanced and/or deregulated.


A third technical solution of the present invention provides a method for producing threonine by a strain in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the expression of at least one of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, and homoserine dehydrogenase is enhanced and/or deregulated.


A fourth technical solution of the present invention provides a method for producing threonine by a strain in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the expression of at least one of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, and homoserine kinase is enhanced and/or deregulated.


A fifth technical solution of the present invention provides a method for producing threonine by a strain in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the expression of at least one of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, homoserine kinase, and threonine synthase is enhanced and/or deregulated.


A sixth technical solution of the present invention provides a method for producing threonine by a strain in which the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter, and the expression of at least one of aspartate aminotransferase, aspartate kinase, aspartate semialdehyde dehydrogenase, homoserine dehydrogenase, homoserine kinase, threonine synthase, and threonine export protein is enhanced and/or deregulated.


The above-mentioned strain is a Corynebacterium bacterium, preferably Corynebacterium glutamicum, and most preferably Corynebacterium glutamicum ATCC 13032.


The detailed information of the enzymes and genes involved in the present invention are as follows:

    • aspartate kinase, coding gene name lysC, NCBI number: cg0306, Cgl0251, NCgl0247;
    • aspartate semialdehyde dehydrogenase, coding gene name asd, NCBI number: Cgl0252, Cg0307, NCgl0248;
    • homoserine dehydrogenase, coding gene name hom, NCBI number: Cg1337, Cgl1183, NCgl1136;
    • threonine synthase, coding gene name thrC, NCBI number: cg2437, Cgl2220, NCgl2139;
    • homoserine kinase, coding gene thrB, NCBI number: Cgl1184, Cg1338, NCgl1137;
    • phosphoenolpyruvate carboxylase, coding gene ppc, NCBI number: cg1787, Cgl1585, NCgl1523;
    • aspartate aminotransferase, coding gene name aspB, NCBI number: cg0294, cg0294 and cg0294;
    • Escherichia coli-derived threonine export protein, encoding gene name rhtC, NCBI number: 948317.


Example 1 Construction of Plasmids for Genome Modification of Strains

1. Construction of the Plasmid pK18mobsacB-Psod-lysCg1a-T311I-Asd for Enhancing Expression of Aspartate Kinase-Aspartate Semialdehyde Dehydrogenase Operon


The upstream homologous arm up was obtained by PCR amplification with P21/P22 primer pair using ATCC13032 genome as template, the promoter segment Psod was obtained by PCR amplification with P23/P24 primer pair, lysCg1a-T311I was obtained by PCR amplification with P25/P26 primer pair, and the downstream homologous arm dn was obtained by PCR amplification with P27/P28 primer pair. The up-Psod segment was obtained by fusion PCR with P21/P24 primer pair using up and Psod as templates. The full-length segment up-Psod-lysCg1a-T311I-dn was obtained by fusion PCR with P21/P28 primer pair using up-Psod, lysCg1a-T311I and dn as templates. pK18mobsacB was digested with BamHI/HindIII. Enzyme-digested pK18mobsacB and up-Psod-lysCg1a-T311I-dn and were assembled using a seamless cloning kit and transformed into Trans1 T1 competent cells to obtain the recombinant plasmid pK18mobsacB-Psod-lysCg1a-T311I-asd.


2. Construction of the Plasmid pK18mobsacB-Psod-aspB for Enhancing Expression of Aspartate Aminotransferase


The plasmid construction method was referred to above 1, and the primers used were P103, P104, P105, P106, P107 and P108.


3. Construction of Plasmid pK18mobsacB-PcspB-HomG378E-thrB for Enhancing Expression of Homoserine Dehydrogenase-Homoserine Kinase Operon


The plasmid construction method was referred to above 1, and the primers used were P29, P30, P31, P32, P33, P34, P35, and P36.


4. Construction of the Plasmid pK18mobsacB-Psod-thrCg1a for Enhancing Expression of Threonine Synthase


The plasmid construction method was referred to above 1, and the primers used were P37, P38, P39, P40, P41 and P42.


5. Construction of the Plasmid pK18mobsacB-Psod-rhtC for Enhancing Expression of Threonine Export Protein


The plasmid construction method was referred to above 1, and the primers used were P157, P158, P159, P160, P161, P162, P163 and P164.


6. Construction of the Plasmid pK18mobsacB-Ptuf-PpcD299N for Enhancing Expression of Phosphoenolpyruvate Carboxylase


The upstream homologous arm up was obtained by PCR amplification with P53/P54 primer pair using ATCC13032 genome as template, the promoter segment Ptuf was obtained by PCR amplification with P55/P56 primer pair, ppcD299N was obtained by PCR amplification with P57/P58 primer pair, and the downstream homologous arm dn was obtained by PCR amplification with P59/P60 primer pair. The segment up-Ptuf was obtained by fusion PCR with P53/P56 primer pair using up and Ptuf as templates. The full length segment up-Ptuf-ppcD299N_dn was obtained by fusion PCR with P53/P60 primer pair using up-Ptuf, ppcD299N and dn as templates. pK18mobsacB was digested with BamHI/HindIII. Enzyme-digested pK18mobsacB and up-Ptuf-ppcD299N-dn were assembled using a seamless cloning kit and transformed into Trans1 T1 competent cells to obtain the recombinant plasmid pK18mobsacB-Ptuf-ppcD299N.


The primers used in the above plasmid construction process are shown in Table 1.









TABLE 1







Primer sequences








Name
Sequence (SEQ ID NOs: 7-50 in order)





P21
AATTCGAGCTCGGTACCCGGGGATCCAGCGACAGGACAAGCACT



GG





P22
CCCGGAATAATTGGCAGCTATGTGCACCTTTCGATCTACG





P23
CGTAGATCGAAAGGTGCACATAGCTGCCAATTATTCCGGG





P24
TTTCTGTACGACCAGGGCCATGGGTAAAAAATCCTTTCGTA





P25
TACGAAAGGATTTTTTACCCATGGCCCTGGTCGTACAGAAA





P26
TCGGAACGAGGGCAGGTGAAGGTGATGTCGGTGGTGCCGTCT





P27
AGACGGCACCACCGACATCACCTTCACCTGCCCTCGTTCCGA





P28
GTAAAACGACGGCCAGTGCCAAGCTTAGCCTGGTAAGAGGAAAC



GT





P29
AATTCGAGCTCGGTACCCGGGGATCCCTGCGGGCAGATCCTTTT



GA





P30
ATTTCTTTATAAACGCAGGTCATATCTACCAAAACTACGC





P31
GCGTAGTTTTGGTAGATATGACCTGCGTTTATAAAGAAAT





P32
GTATATCTCCTTCTGCAGGAATAGGTATCGAAAGACGAAA





P33
TTTCGTCTTTCGATACCTATTCCTGCAGAAGGAGATATAC





P34
TAGCCAATTCAGCCAAAACCCCCACGCGATCTTCCACATCC





P35
GGATGTGGAAGATCGCGTGGGGGTTTTGGCTGAATTGGCTA





P36
GTAAAACGACGGCCAGTGCCAAGCTTGCTGGCTCTTGCCGTCGA



TA





P37
ATTCGAGCTCGGTACCCGGGGATCCGCCGTTGATCATTGTTCTT



CA





P38
CCCGGAATAATTGGCAGCTAGGATATAACCCTATCCCAAG





P39
CTTGGGATAGGGTTATATCCTAGCTGCCAATTATTCCGGG





P40
ACGCGTCGAAATGTAGTCCATGGGTAAAAAATCCTTTCGTA





P41
TACGAAAGGATTTTTTACCCATGGACTACATTTCGACGCGT





P42
GTAAAACGACGGCCAGTGCCAAGCTTGAATACGCGGATTCCCTC



GC





P53
AATTCGAGCTCGGTACCCGGGGATCCTACGTCGTCGAGCAGACC



CG





P54
CATTCGCAGGGTAACGGCCAAGGGTGTTGGCGTGCATGAG





P55
CTCATGCACGCCAACACCCTTGGCCGTTACCCTGCGAATG





P56
TCGCGTAAAAAATCAGTCATTGTATGTCCTCCTGGACTTC





P57
GAAGTCCAGGAGGACATACAATGACTGATTTTTTACGCGA





P58
GTGACCTTATTCATGCGGTTCGACAGGCTGAGCTCATGCT





P59
AGCATGAGCTCAGCCTGTCGAACCGCATGAATAAGGTCAC





P60
GTAAAACGACGGCCAGTGCCAAGCTTGGTGACTTGGGCGCGTTC



GA





P103
GAGCTCGGTACCCGGGGATCCGCAGGGTATTGCAGGGACTCA





P104
CAAGCCCGGAATAATTGGCAGCTAAACTGCGTACCTCCGCATGT



GGTGG





P105
TAGCTGCCAATTATTCCGGGCTTGT





P106
GGGTAAAAAATCCTTTCGTAGGTTT





P107
GGAAACCTACGAAAGGATTTTTTACCCATGAGTTCAGTTTCGCT



GCAGGATTT





P108
ACGACGGCCAGTGCCAAGCTTACACCGGAACAACCCACATG





P157
TACGAATTCGAGCTCGGTACCCGGGGATCCAGTTAACTCCACCG



ACCGGGTACTGC





P158
AAGCCCGGAATAATTGGCAGCTATGTCTTCGCTGGACCAAGAG





P159
CTCTTGGTCCAGCGAAGACATAGCTGCCAATTATTCCGGGCTT





P160
GACGGTGAGAAATAACATCAACATGGGTAAAAAATCCTTTCGTA





P161
TACGAAAGGATTTTTTACCCATGTTGATGTTATTTCTCACCGTC





P162
TGCCTCTTTTAGCCTTTTCAGAGGGTCACCGCGAAATAATCAAA



TGAA





P163
TTCATTTGATTATTTCGCGGTGACCCTCTGAAAAGGCTAAAAGA



GGCA





P164
GTTGTAAAACGACGGCCAGTGCCAAGCTTAAAAGGCAGTCCAGT



ACACCCT









Example 2 Construction of a Genome-Modified Strain

1. Construction of a Strain with Enhanced Expression of Aspartate Aminotransferase


ATCC13032 competent cells were prepared according to the classic method of Corynebacterium glutamicum (C. glutamicum Handbook, Chapter 23). The competent cells were transformed with the recombinant plasmid pK18mobsacB-Psod-aspB by electroporation, and transformants were screened on a selection medium containing 15 mg/L kanamycin, and the gene of interest was inserted into the chromosome due to homology. The screened transformants were cultured overnight in a normal liquid brain-heart infusion medium at 30° C. under shaken at 220 rpm on a rotary shaker. During this culture process, the transformants underwent a second recombination, removing the vector sequence from the genome through gene exchange. The culture was diluted in a serial gradient (10−2 to 10−4), and the dilutions were spread on a normal solid brain-heart infusion medium containing 10% sucrose and subjected to static culture at 33° C. for 48 h. Strains grown on sucrose medium did not carry the inserted vector sequences in their genome. The fragment of interest was amplified by PCR and analyzed by nucleotide sequencing to obtain the mutant strain of interest named SMCT061. Compared to strain ATCC13032, the promoter of the aspB gene in this strain was replaced with the Psod promoter.


2. Construction of a Strain with Enhanced Expression of Aspartate Kinase-Aspartate Semialdehyde Dehydrogenase Operon


The strain construction method was referred to the above 1. SMCT061 was used as the original strain, and the pK18mobsacB-Psod-lysCg1a-T311I-asd plasmid was introduced into SMCT061 to perform modification for enhancing aspartate kinase-aspartate semialdehyde dehydrogenase operon. The obtained strain was named SMCT062. Compared to strain SMCT061, the lysC gene of this strain was mutated, resulting in its start codon to mutate from GTG to ATG, and the position 311 of the encoded amino acid sequence to mutate from threonine to isoleucine, and the promoter of the lysC-asd operon was replaced with the Psod promoter.


3. Construction of a Strain with Enhanced Expression of Homoserine Dehydrogenase-Homoserine Kinase


The strain construction method was referred to the above 1. SMCT062 was used as the original strain, and the pK18mobsacB-PcspB-homG378E-thrB plasmid was introduced into SMCT062 to perform modification for enhancing the expression of homoserine dehydrogenase-homoserine kinase. The obtained modified strain was named SMCT063. Compared to the original strain SMCT062, the hom gene of this strain was mutated, resulting in the G378E mutation in its encoded protein, and the promoter of the hom-thrB operon was replaced with PcspB promoter.


4. Construction of a Strain with Enhanced Expression of Threonine Synthase


The strain construction method was referred to the above 1. SMCT063 was used as the original strain, and the pK18mobsacB-Psod-thrCg1a plasmid was introduced into SMCT063 to perform modification for enhancing the expression of threonine synthase. The obtained modified strain was named SMCT064. Compared to the strain SMCT063, the start codon of the thrC gene of this strain was mutated to ATG, and the promoter of the thrC gene was replaced with Psod.


5. Construction of a Strain with Enhanced Expression of Threonine Export Protein


The strain construction method was referred to the above 1. SMCT064 was used as the original strain, and the pK18mobsacB-Psod-rhtC plasmid was introduced into SMCT064 to perform modification for enhancing the expression of threonine export protein. The obtained modified strain was named SMCT065. Compared to SMCT064, the threonine export protein gene rhtC from Escherichia coli was inserted downstream of the cg2009 gene in this strain.


6. Construction of a Strain with Enhanced Expression of Phosphoenolpyruvate Carboxylase


The strain construction method was referred to the above 1. SMCT061, SMCT062, SMCT063, SMCT064, and SMCT065 were used as original strains, and the pK18mobsacB-Ptuf-ppcD299N plasmid was introduced into the above original strains, respectively, to perform modification for enhancing the expression of phosphoenolpyruvate carboxylase. The obtained modified strains were named SMCT066, SMCT067, SMCT068, SMCT079, and SMCT070, respectively. Compared to their corresponding original strains, the mutation of the gene ppc encoding phosphoenolpyruvate carboxylase in these modified strains caused the D299N mutation in the proteins encoded, and the 27 bp segment upstream of the start codon of the ppc gene was replaced with Ptuf promoter.


The genotypes of the above-mentioned strains obtained by genetic modification are shown in Table 2.









TABLE 2







Genotype information of strains








Strains
Genotype





SMCT061
ATCC13032, Psod-aspB


SMCT062
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd


SMCT063
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, PcspB-homG378E-thrB


SMCT064
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, PcspB-homG378E thrB, Psod-thrCg1a


SMCT065
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, PcspB-homG378E-thrB, Psod-thrCg1a, Psod-rhtC


SMCT066
ATCC13032, Psod-aspB, Ptuf-ppcD299N


SMCT067
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, Ptuf-ppcD299N


SMCT068
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, PcspB-homG378E-thrB, Ptuf-ppcD299N


SMCT069
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, PcspB-homG378E-thrB, Psod-thrCg1a, Ptuf-ppcD299N


SMCT070
ATCC13032, Psod-aspB, Psod-lysCg1a-T311I-asd, PcspB-homG378E-thrB, Psod-thrCg1a, Psod-rhtC, Ptuf-



ppcD299N









Example 3 Shake Flask Fermentation Verification of Strains

Each of the Modified Strains Constructed in Example 2 was Validated by Shake Flask fermentation as follows:


1. Medium

Seed activation medium: BHI 3.7%, agar 2%, pH 7.


Seed medium: Peptone 5/L, yeast extract 5 g/L, sodium chloride 10 g/L, ammonium sulfate 16 g/L, urea 8 g/L, potassium dihydrogen phosphate 10.4 g/L, dipotassium hydrogen phosphate 21.4 g/L, biotin 5 mg/L, magnesium sulfate 3 g/L. Glucose 50 g/L, pH 7.2.


Fermentation medium: corn steep liquor 50 mL/L, glucose 30 g/L, ammonium sulfate 4 g/L, MOPS 30 g/L, potassium dihydrogen phosphate 10 g/L, urea 20 g/L, biotin 10 mg/L, magnesium sulfate 6 g/L, ferrous sulfate 1 g/L, VB1·HCl 40 mg/L, calcium pantothenate 50 mg/L, nicotinamide 40 mg/L, manganese sulfate 1 g/L, zinc sulfate 20 mg/L, copper sulfate 20 mg/L, pH 7.2.


2. Production of L-Threonine by Shake Flask Fermentation with Engineered Strain

    • (1) Seed culture: 1 loop of seed of SMCT061, SMCT062, SMCT063, SMCT064, SMCT065, SMCT066, SMCT067, SMCT068, SMCT069 and SMCT070 on the slant culture medium was picked and inoculated into a 500 mL Erlenmeyer flask containing 20 mL of seed culture medium, and cultured at 30° C. and 220 r/min for 16 h to obtain a seed broth.
    • (2) Fermentation culture: 2 mL of seed liquid was inoculated into a 500 mL Erlenmeyer flask containing 20 mL of fermentation medium and cultured at 33° C. and 220 r/min under shaking for 24 h to obtain a fermentation broth.
    • (3) 1 mL of fermentation broth was taken and centrifuged (12000 rpm, 2 min), and the supernatant was collected. L-threonine in the fermentation broth of modified strain and control strain were detected by HPLC.


The results of shake flask fermentation for threonine are shown in Table 3.









TABLE 3







Fermentation test results








Chassis strain
ppc modified strain














Threonine


Threonine


Strain

production
Strain

production


number
OD562
(g/L)
number
OD562
(g/L)















SMCT061
24
0.8
SMCT066
24
1.0


SMCT062
23
2.5
SMCT067
23
3.3


SMCT063
23
3.8
SMCT068
23
5.1


SMCT064
22
5.0
SMCT069
22
6.9


SMCT065
22
6.2
SMCT070
22
8.7









The results showed that by optimizing the promoter of the gene encoding phosphoenolpyruvate carboxylase and engineering the D299N mutation on phosphoenolpyruvate carboxylase in the threonine-producing strains SMCT061, SMCT062, SMCT063, SMCT064, and SMCT065, the threonine production was further increased. The threonine production of strains SMCT066, SMCT067, SMCT068, SMCT069, and SMCT070 was increased by 25%, 33%, 35%, 38%, and 40%, respectively, indicating that by replacing the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase with a strong promoter and engineering the D299N mutation on phosphoenolpyruvate carboxylase, the supply of oxaloacetate, a precursor of threonine synthesis, could be increased, thereby promoting the synthesis of threonine. In addition, the threonine production was further increased by combining the modification of the above-mentioned phosphoenolpyruvate carboxylase with the enhanced expression of different enzymes in the threonine synthesis pathway and threonine export proteins, indicating that the combination of the above-mentioned modifications was more conducive to improving the threonine-producing ability of the strain.


Although the present invention has been described in detail above with general descriptions and specific embodiments, it is obvious to those skilled in the art that some modifications or improvements may be made based on the present invention. Therefore, these modifications or improvements made without departing from the spirit of the present invention belong to the scope of protection claimed by the present invention.


DESCRIPTION OF SEQUENCES










Corynebacterium glutamicum PPC wt




SEQ ID No: 1



Met Thr Asp Phe Leu Arg Asp Asp Ile Arg Phe Leu Gly Gln Ile Leu



1               5                   10                  15





Gly Glu Val Ile Ala Glu Gln Glu Gly Gln Glu Val Tyr Glu Leu Val


            20                  25                  30





Glu Gln Ala Arg Leu Thr Ser Phe Asp Ile Ala Lys Gly Asn Ala Glu


        35                  40                  45





Met Asp Ser Leu Val Gln Val Phe Asp Gly Ile Thr Pro Ala Lys Ala


    50                  55                  60





Thr Pro Ile Ala Arg Ala Phe Ser His Phe Ala Leu Leu Ala Asn Leu


65                  70                  75                  80





Ala Glu Asp Leu Tyr Asp Glu Glu Leu Arg Glu Gln Ala Leu Asp Ala


                85                  90                  95





Gly Asp Thr Pro Pro Asp Ser Thr Leu Asp Ala Thr Trp Leu Lys Leu


            100                 105                 110





Asn Glu Gly Asn Val Gly Ala Glu Ala Val Ala Asp Val Leu Arg Asn


        115                 120                 125





Ala Glu Val Ala Pro Val Leu Thr Ala His Pro Thr Glu Thr Arg Arg


    130                 135                 140





Arg Thr Val Phe Asp Ala Gln Lys Trp Ile Thr Thr His Met Arg Glu


145                 150                 155                 160





Arg His Ala Leu Gln Ser Ala Glu Pro Thr Ala Arg Thr Gln Ser Lys


                165                 170                 175





Leu Asp Glu Ile Glu Lys Asn Ile Arg Arg Arg Ile Thr Ile Leu Trp


            180                 185                 190





Gln Thr Ala Leu Ile Arg Val Ala Arg Pro Arg Ile Glu Asp Glu Ile


        195                 200                 205





Glu Val Gly Leu Arg Tyr Tyr Lys Leu Ser Leu Leu Glu Glu Ile Pro


    210                 215                 220





Arg Ile Asn Arg Asp Val Ala Val Glu Leu Arg Glu Arg Phe Gly Glu


225                 230                 235                 240





Gly Val Pro Leu Lys Pro Val Val Lys Pro Gly Ser Trp Ile Gly Gly


                245                 250                 255





Asp His Asp Gly Asn Pro Tyr Val Thr Ala Glu Thr Val Glu Tyr Ser


            260                 265                 270





Thr His Arg Ala Ala Glu Thr Val Leu Lys Tyr Tyr Ala Arg Gln Leu


        275                 280                 285





His Ser Leu Glu His Glu Leu Ser Leu Ser Asp Arg Met Asn Lys Val


    290                 295                 300





Thr Pro Gln Leu Leu Ala Leu Ala Asp Ala Gly His Asn Asp Val Pro


305                 310                 315                 320





Ser Arg Val Asp Glu Pro Tyr Arg Arg Ala Val His Gly Val Arg Gly


                325                 330                 335





Arg Ile Leu Ala Thr Thr Ala Glu Leu Ile Gly Glu Asp Ala Val Glu


            340                 345                 350





Gly Val Trp Phe Lys Val Phe Thr Pro Tyr Ala Ser Pro Glu Glu Phe


        355                 360                 365





Leu Asn Asp Ala Leu Thr Ile Asp His Ser Leu Arg Glu Ser Lys Asp


    370                 375                 380





Val Leu Ile Ala Asp Asp Arg Leu Ser Val Leu Ile Ser Ala Ile Glu


385                390                  395                 400  





Ser Phe Gly Phe Asn Leu Tyr Ala Leu Asp Leu Arg Gln Asn Ser Glu


                405                 410                 415 





Ser Tyr Glu Asp Val Leu Thr Glu Leu Phe Glu Arg Ala Gln Val Thr


            420                 425                 430





Ala Asn Tyr Arg Glu Leu Ser Glu Ala Glu Lys Leu Glu Val Leu Leu


        435                 440                 445





Lys Glu Leu Arg Ser Pro Arg Pro Leu Ile Pro His Gly Ser Asp Glu


    450                 455                 460





Tyr Ser Glu Val Thr Asp Arg Glu Leu Gly Ile Phe Arg Thr Ala Ser


465                 470                 475                 480





Glu Ala Val Lys Lys Phe Gly Pro Arg Met Val Pro His Cys Ile Ile


                485                 490                 495





Ser Met Ala Ser Ser Val Thr Asp Val Leu Glu Pro Met Val Leu Leu


            500                 505                 510





Lys Glu Phe Gly Leu Ile Ala Ala Asn Gly Asp Asn Pro Arg Gly Thr


        515                 520                 525





Val Asp Val Ile Pro Leu Phe Glu Thr Ile Glu Asp Leu Gln Ala Gly


    530                 535                 540





Ala Gly Ile Leu Asp Glu Leu Trp Lys Ile Asp Leu Tyr Arg Asn Tyr


545                 550                 555                 560





Leu Leu Gln Arg Asp Asn Val Gln Glu Val Met Leu Gly Tyr Ser Asp


                565                 570                 575





Ser Asn Lys Asp Gly Gly Tyr Phe Ser Ala Asn Trp Ala Leu Tyr Asp


            580                 585                 590





Ala Glu Leu Gln Leu Val Glu Leu Cys Arg Ser Ala Gly Val Lys Leu


        595                 600                 605





Arg Leu Phe His Gly Arg Gly Gly Thr Val Gly Arg Gly Gly Gly Pro


    610                 615                 620





Ser Tyr Asp Ala Ile Leu Ala Gln Pro Arg Gly Ala Val Gln Gly Ser


625                 630                 635                 640





Val Arg Ile Thr Glu Gln Gly Glu Ile Ile Ser Ala Lys Tyr Gly Asn


                645                 650                 655





Pro Glu Thr Ala Arg Arg Asn Leu Glu Ala Leu Val Ser Ala Thr Leu


            660                 665                 670





Glu Ala Ser Leu Leu Asp Val Ser Glu Leu Thr Asp His Gln Arg Ala


        675                 680                 685





Tyr Asp Ile Met Ser Glu Ile Ser Glu Leu Ser Leu Lys Lys Tyr Ala


    690                 695                 700





Ser Leu Val His Glu Asp Gln Gly Phe Ile Asp Tyr Phe Thr Gln Ser


705                 710                 715                 720





Thr Pro Leu Gln Glu Ile Gly Ser Leu Asn Ile Gly Ser Arg Pro Ser


                725                 730                 735





Ser Arg Lys Gln Thr Ser Ser Val Glu Asp Leu Arg Ala Ile Pro Trp


            740                 745                 750





Val Leu Ser Trp Ser Gln Ser Arg Val Met Leu Pro Gly Trp Phe Gly


        755                 760                 765





Val Gly Thr Ala Leu Glu Gln Trp Ile Gly Glu Gly Glu Gln Ala Thr


    770                 775                 780





Gln Arg Ile Ala Glu Leu Gln Thr Leu Asn Glu Ser Trp Pro Phe Phe


785                 790                 795                 800





Thr Ser Val Leu Asp Asn Met Ala Gln Val Met Ser Lys Ala Glu Leu


                805                 810                 815





Arg Leu Ala Lys Leu Tyr Ala Asp Leu Ile Pro Asp Thr Glu Val Ala


            820                 825                 830





Glu Arg Val Tyr Ser Val Ile Arg Glu Glu Tyr Phe Leu Thr Lys Lys


        835                 840                 845





Met Phe Cys Val Ile Thr Gly Ser Asp Asp Leu Leu Asp Asp Asn Pro


    850                 855                 860





Leu Leu Ala Arg Ser Val Gln Arg Arg Tyr Pro Tyr Leu Leu Pro Leu


865                 870                 875                 880





Asn Val Ile Gln Val Glu Met Met Arg Arg Tyr Arg Lys Gly Asp Gln


                885                 890                 895





Ser Glu Gln Val Ser Arg Asn Ile Gln Leu Thr Met Asn Gly Leu Ser


            900                 905                 910





Thr Ala Leu Arg Asn Ser Gly


        915






Corynebacterium glutamicum PPC D299N



SEQ ID No: 2



Met Thr Asp Phe Leu Arg Asp Asp Ile Arg Phe Leu Gly Gln Ile Leu



1               5                   10                  15





Gly Glu Val Ile Ala Glu Gln Glu Gly Gln Glu Val Tyr Glu Leu Val


            20                  25                  30





Glu Gln Ala Arg Leu Thr Ser Phe Asp Ile Ala Lys Gly Asn Ala Glu


        35                  40                  45





Met Asp Ser Leu Val Gln Val Phe Asp Gly Ile Thr Pro Ala Lys Ala


    50                  55                  60





Thr Pro Ile Ala Arg Ala Phe Ser His Phe Ala Leu Leu Ala Asn Leu


65                  70                  75                  80





Ala Glu Asp Leu Tyr Asp Glu Glu Leu Arg Glu Gln Ala Leu Asp Ala


                85                  90                  95





Gly Asp Thr Pro Pro Asp Ser Thr Leu Asp Ala Thr Trp Leu Lys Leu


            100                 105                 110





Asn Glu Gly Asn Val Gly Ala Glu Ala Val Ala Asp Val Leu Arg Asn


        115                 120                 125





Ala Glu Val Ala Pro Val Leu Thr Ala His Pro Thr Glu Thr Arg Arg


    130                 135                 140





Arg Thr Val Phe Asp Ala Gln Lys Trp Ile Thr Thr His Met Arg Glu


145                 150                 155                 160





Arg His Ala Leu Gln Ser Ala Glu Pro Thr Ala Arg Thr Gln Ser Lys


                165                 170                 175





Leu Asp Glu Ile Glu Lys Asn Ile Arg Arg Arg Ile Thr Ile Leu Trp


            180                 185                 190





Gln Thr Ala Leu Ile Arg Val Ala Arg Pro Arg Ile Glu Asp Glu Ile


        195                 200                 205





Glu Val Gly Leu Arg Tyr Tyr Lys Leu Ser Leu Leu Glu Glu Ile Pro


    210                 215                 220





Arg Ile Asn Arg Asp Val Ala Val Glu Leu Arg Glu Arg Phe Gly Glu


225                 230                 235                 240





Gly Val Pro Leu Lys Pro Val Val Lys Pro Gly Ser Trp Ile Gly Gly


                245                 250                 255





Asp His Asp Gly Asn Pro Tyr Val Thr Ala Glu Thr Val Glu Tyr Ser


            260                 265                 270





Thr His Arg Ala Ala Glu Thr Val Leu Lys Tyr Tyr Ala Arg Gln Leu


        275                 280                 285





His Ser Leu Glu His Glu Leu Ser Leu Ser Asn Arg Met Asn Lys Val


    290                 295                 300





Thr Pro Gln Leu Leu Ala Leu Ala Asp Ala Gly His Asn Asp Val Pro


305                 310                 315                 320





Ser Arg Val Asp Glu Pro Tyr Arg Arg Ala Val His Gly Val Arg Gly


                325                 330                 335





Arg Ile Leu Ala Thr Thr Ala Glu Leu Ile Gly Glu Asp Ala Val Glu


            340                 345                 350





Gly Val Trp Phe Lys Val Phe Thr Pro Tyr Ala Ser Pro Glu Glu Phe


        355                 360                 365





Leu Asn Asp Ala Leu Thr Ile Asp His Ser Leu Arg Glu Ser Lys Asp


    370                 375                 380





Val Leu Ile Ala Asp Asp Arg Leu Ser Val Leu Ile Ser Ala Ile Glu


385                390                  395                 400





Ser Phe Gly Phe Asn Leu Tyr Ala Leu Asp Leu Arg Gln Asn Ser Glu


                405                 410                 415





Ser Tyr Glu Asp Val Leu Thr Glu Leu Phe Glu Arg Ala Gln Val Thr


            420                 425                 430





Ala Asn Tyr Arg Glu Leu Ser Glu Ala Glu Lys Leu Glu Val Leu Leu


        435                 440                 445





Lys Glu Leu Arg Ser Pro Arg Pro Leu Ile Pro His Gly Ser Asp Glu


    450                 455                 460





Tyr Ser Glu Val Thr Asp Arg Glu Leu Gly Ile Phe Arg Thr Ala Ser


465                 470                 475                 480





Glu Ala Val Lys Lys Phe Gly Pro Arg Met Val Pro His Cys Ile Ile


                485                 490                 495





Ser Met Ala Ser Ser Val Thr Asp Val Leu Glu Pro Met Val Leu Leu


            500                 505                 510





Lys Glu Phe Gly Leu Ile Ala Ala Asn Gly Asp Asn Pro Arg Gly Thr


        515                 520                 525





Val Asp Val Ile Pro Leu Phe Glu Thr Ile Glu Asp Leu Gln Ala Gly


    530                 535                 540





Ala Gly Ile Leu Asp Glu Leu Trp Lys Ile Asp Leu Tyr Arg Asn Tyr


545                 550                 555                 560





Leu Leu Gln Arg Asp Asn Val Gln Glu Val Met Leu Gly Tyr Ser Asp


                565                 570                 575





Ser Asn Lys Asp Gly Gly Tyr Phe Ser Ala Asn Trp Ala Leu Tyr Asp


            580                 585                 590





Ala Glu Leu Gln Leu Val Glu Leu Cys Arg Ser Ala Gly Val Lys Leu


        595                 600                 605





Arg Leu Phe His Gly Arg Gly Gly Thr Val Gly Arg Gly Gly Gly Pro


    610                 615                 620





Ser Tyr Asp Ala Ile Leu Ala Gln Pro Arg Gly Ala Val Gln Gly Ser


625                 630                 635                 640





Val Arg Ile Thr Glu Gln Gly Glu Ile Ile Ser Ala Lys Tyr Gly Asn


                645                 650                 655





Pro Glu Thr Ala Arg Arg Asn Leu Glu Ala Leu Val Ser Ala Thr Leu


            660                 665                 670





Glu Ala Ser Leu Leu Asp Val Ser Glu Leu Thr Asp His Gln Arg Ala


        675                 680                 685





Tyr Asp Ile Met Ser Glu Ile Ser Glu Leu Ser Leu Lys Lys Tyr Ala


    690                 695                 700





Ser Leu Val His Glu Asp Gln Gly Phe Ile Asp Tyr Phe Thr Gln Ser


705                 710                 715                 720





Thr Pro Leu Gln Glu Ile Gly Ser Leu Asn Ile Gly Ser Arg Pro Ser


                725                 730                 735





Ser Arg Lys Gln Thr Ser Ser Val Glu Asp Leu Arg Ala Ile Pro Trp


            740                 745                 750





Val Leu Ser Trp Ser Gln Ser Arg Val Met Leu Pro Gly Trp Phe Gly


        755                 760                 765





Val Gly Thr Ala Leu Glu Gln Trp Ile Gly Glu Gly Glu Gln Ala Thr


    770                 775                 780





Gln Arg Ile Ala Glu Leu Gln Thr Leu Asn Glu Ser Trp Pro Phe Phe


785                 790                 795                 800





Thr Ser Val Leu Asp Asn Met Ala Gln Val Met Ser Lys Ala Glu Leu


                805                 810                 815





Arg Leu Ala Lys Leu Tyr Ala Asp Leu Ile Pro Asp Thr Glu Val Ala


            820                 825                 830





Glu Arg Val Tyr Ser Val Ile Arg Glu Glu Tyr Phe Leu Thr Lys Lys


        835                 840                 845





Met Phe Cys Val Ile Thr Gly Ser Asp Asp Leu Leu Asp Asp Asn Pro


    850                 855                 860





Leu Leu Ala Arg Ser Val Gln Arg Arg Tyr Pro Tyr Leu Leu Pro Leu


865                 870                 875                 880





Asn Val Ile Gln Val Glu Met Met Arg Arg Tyr Arg Lys Gly Asp Gln


                885                 890                 895





Ser Glu Gln Val Ser Arg Asn Ile Gln Leu Thr Met Asn Gly Leu Ser


            900                 905                 910





Thr Ala Leu Arg Asn Ser Gly


        915





27 bp Up


SEQ ID No: 3



caatgtgaaa gagtgtttaa agtagtt                                      27






Ptuf


SEQ ID No: 4



tggccgttac cctgcgaatg tccacagggt agctggtagt ttgaaaatca acgccgttgc  60



ccttaggatt cagtaactgg cacattttgt aatgcgctag atctgtgtgc tcagtcttcc 120


aggctgctta tcacagtgaa agcaaaacca attcgtggct gcgaaagtcg            180


gaagtccagg aggacataca                                             200





Psod


SEQ ID No: 5



tagctgccaa ttattccggg cttgtgaccc gctacccgat aaataggtcg gctgaaaaat  60



ttcgttgcaa tatcaacaaa aaggcctatc attgggaggt gtcgcaccaa gtacttttgc 120


gaagcgccat ctgacggatt ttcaaaagat gtatatgctc ggtgcggaaa cctacgaaag 180


gattttttac cc                                                     192





PcspB


SEQ ID No: 6



acctgcgttt ataaagaaat gtaaacgtga toggatcgat ataaaagaaa cagtttgtac  60



tcaggtttga agcattttct ccaattcgcc tggcaaaaat ctcaattgtc gcttacagtt 120


tttctcaacg acaggctgct aagctgctag ttcggtggcc tagtgagtgg cgtttacttg 180


gataaaagta atcccatgtc gtgatcagcc attttgggtt gtttccatag catccaaagg 240


tttcgtcttt cgatacctat                                             260





Claims
  • 1. A method for increasing the production of threonine production by a Corynebacterium species or in constructing a Corynebacterium species that produces threonine, the method comprising: the 20-30 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase in the Corynebacterium species with a strong promoter to enhance expression of the gene.
  • 2. The method of claim 1, wherein replacing includes replacing the 27 bp segment upstream of the start codon of the gene encoding phosphoenolpyruvate carboxylase in the Corynebacterium species with the strong promoter.
  • 3. The method of claim 1, wherein the amino acid sequence of the phosphoenolpyruvate carboxylase is SEQ ID NO. 1 or 2.
  • 4. A recombinant microorganism, wherein, the 20-30 bp segment upstream of the start codon of a gene encoding phosphoenolpyruvate carboxylase in the recombinant microorganism is replaced with a strong promoter.
  • 5. The recombinant microorganism of claim 4, wherein the amino acid sequence of the phosphoenolpyruvate carboxylase of the recombinant microorganism is SEQ ID NO. 1 or 2.
  • 6. The recombinant microorganism of claim 4, wherein the enzyme activity of any one or more of the following enzymes (1) to (7) in the recombinant microorganism is enhanced and/or the feedback inhibition thereof is deregulated: (1) aspartate kinase;(2) aspartate semialdehyde dehydrogenase;(3) homoserine dehydrogenase;(4) threonine synthase;(5) homoserine kinase;(6) aspartate aminotransferase; and(7) threonine export protein;preferably, the threonine export protein is one derived from Escherichia coli.
  • 7. The recombinant microorganism of claim 6, wherein the enhancement of the enzyme activity is achieved by any one of or any combination of 1) to 6) below: 1) introducing a plasmid carrying the gene encoding the enzyme;2) increasing the copy number of the gene encoding the enzyme in the chromosome;3) altering the promoter sequence of the gene encoding the enzyme in the chromosome;4) operably linking a strong promoter to the gene encoding the enzyme;5) altering the amino acid sequence of the enzyme; and6) altering the nucleotide sequence encoding the enzyme.
  • 8. The recombinant microorganism of claim 4, wherein the starting microorganism used for constructing the recombinant microorganism is a Corynebacterium species.
  • 9. (canceled)
  • 10. A method for fermentative production of threonine or a derivative thereof, comprising a step of culturing a recombinant microorganism, and isolating threonine or the derivative thereof from the culture, wherein in the recombinant microorganism, the 20-30 bp segment upstream of the initiation codon of a gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter.
  • 11. The method of claim 10, wherein in the recombinant microorganism the 27 bp segment upstream of the initiation codon of a gene encoding phosphoenolpyruvate carboxylase is replaced with a strong promoter.
  • 12. The method of claim 11, wherein the strong promoter is Ptuf.
  • 13. The method of claim 10, wherein the amino acid sequence of the phosphoenolpyruvate carboxylase of the recombinant microorganism is SEQ ID NO. 1 or 2.
  • 14. The method of claim 10, wherein the enzyme activity of any one or more of the following enzymes (1) to (7) in the recombinant microorganism is enhanced and/or the feedback inhibition thereof is deregulated: (1) aspartate kinase;(2) aspartate semialdehyde dehydrogenase;(3) homoserine dehydrogenase;(4) threonine synthase;(5) homoserine kinase;(6) aspartate aminotransferase; and(7) threonine export protein;preferably, the threonine export protein is one derived from Escherichia coli.
  • 15. The method of claim 14, wherein the enhancement of the enzyme activity is achieved by any one of or any combination of 1) to 6) below: 1) introducing a plasmid carrying the gene encoding the enzyme;2) increasing the copy number of the gene encoding the enzyme in the chromosome;3) altering the promoter sequence of the gene encoding the enzyme in the chromosome;4) operably linking a strong promoter to the gene encoding the enzyme;5) altering the amino acid sequence of the enzyme; and6) altering the nucleotide sequence encoding the enzyme.
  • 16. The method of claim 10, wherein the starting microorganism used for constructing the recombinant microorganism is a Corynebacterium species.
  • 17. The method of claim 16, wherein the Corynebacterium species is Corynebacterium glutamicum.
  • 18. The method of claim 2, wherein the strong promoter is Ptuf.
  • 19. The recombinant microorganism of claim 4, wherein the 27 bp segment upstream of the initiation codon of a gene encoding phosphoenolpyruvate carboxylase in the recombinant microorganism is replaced with a strong promoter.
  • 20. The recombinant microorganism of claim 19, wherein the strong promoter is Ptuf.
  • 21. The recombinant microorganism of claim 8, wherein the Corynebacterium species is Corynebacterium glutamicum.
Priority Claims (1)
Number Date Country Kind
202210107366.3 Jan 2022 CN national
PCT Information
Filing Document Filing Date Country Kind
PCT/CN2022/143106 12/29/2022 WO