Patent Application
20240018147
The present invention relates to the field of medicine, and specifically relates to a crystal form of a salt of a compound for degrading BTK, preparation therefor, and an application thereof.
Bruton's tyrosine kinase (BTK), a member of the Tec family of non-receptor protein tyrosine kinases, is a key regulator in the B cell antigen receptor (BCR) signaling pathway, and is distributed in the lymphatic system, hematopoietic system and blood system. BTK mutations may activate downstream signaling pathways in tumor cell proliferation, differentiation, angiogenesis, etc., which may lead to X-linked agammaglobulinemia, non-Hodgkin's lymphoma (NHL) and many B-cell malignancies, including chronic lymphocytic leukemia (CLL), mantle cell lymphoma, and diffuse large B-cell lymphoma. As mainly expressed in B cells and myeloid cells, BTK is a target with relatively high targeting ability and safety.
PROTAC (proteolysis targeting chimera) molecules are a class of dual function compounds which are capable of binding to both targeted proteins and E3 ubiquitin ligases. This class of compounds can induce recognition of targeted proteins by proteasomes in a cell to cause the degradation of the targeted protein, which can effectively reduce the contents of the targeted proteins in the cell. By introducing a ligand capable of binding to various targeted proteins into the PROTAC molecules, it is possible to apply the PROTAC technology to the treatment of various diseases, and this technology has attracted extensive attention in recent years.
An object of the present invention is to provide a compound with a novel structure and a good pharmaceutical effect for degrading BTK, a pharmaceutical composition thereof and the use thereof in the anti-tumor field. The compound for degrading BTK of the present invention has good stability (including chemical stability and crystal form stability), is convenient for oral administration, and has relatively good solubility and bioavailability.
An object of the present invention is to provide a pharmaceutical salt of a compound with a novel structure and a good pharmaceutical effect for degrading BTK or crystals of the compound for degrading BTK and the pharmaceutical salt thereof, a pharmaceutical composition thereof and the use thereof in the anti-tumor field.
The crystals of the present invention are easy to be processed, crystallized and treated, has good stability, is convenient for oral administration, and has relatively good solubility and bioavailability.
Another object of the present invention is to provide a method for preparing the compound for degrading BTK and/or the crystal.
Another object of the present invention is to provide a pharmaceutical composition containing the compound for degrading BTK and/or the crystal.
Yet another object of the present invention is to provide an application of the compound for degrading BTK and/or the crystal.
The present invention provides a pharmaceutical salt of a compound as shown in formula (I),
In some embodiments, Cy1 or Cy2 is each independently selected from piperidyl or azacyclobutyl.
In some embodiments, Cy1 or Cy2 is each independently selected from
In some embodiments, the pharmaceutical salt of the compound as shown in formula (I) is selected from maleate, fumarate, halogen acid salt (preferably hydrobromide and hydrochloride), sulfate, phosphate, L-tartrate, citrate, L-malate, hippurate, D-glucuronate, glycollate, mucate, succinate, lactate, orotate, pamoate, glycinate, alanine salt, arginine salt, cinnamate, benzoate, benzenesulfonate, p-toluenesulfonate, acetate, propionate, valerianate, triphenyl acetate, L-proline salt, ferulate, 2-hydroxyethanesulfonate, mandelate, nitrate, mesylate, malonate, gentisate, salicylate, oxalate or glutarate.
In some embodiments, the halogen acid salt is hydrobromide or hydrochloride.
In some embodiments, the molar ratios of the compound (free base) as shown in formula (I) to different acids are about 1:1, 1:1.5, 1:2, 1:2.5 or 1:3.
The present invention further provides a pharmaceutical salt of the compound as shown in formula (Ia) or (Ib) below,
In some embodiments, the pharmaceutical salt of the compound as shown in formula (Ia) or (Ib) is selected from maleate, fumarate, halogen acid salt (preferably hydrobromide and hydrochloride), sulfate, phosphate, L-tartrate, citrate, L-malate, hippurate, D-glucuronate, glycollate, mucate, succinate, lactate, orotate, pamoate, glycinate, alanine salt, arginine salt, cinnamate, benzoate, benzenesulfonate, p-toluenesulfonate, acetate, propionate, valerianate, triphenyl acetate, L-proline salt, ferulate, 2-hydroxyethanesulfonate, mandelate, nitrate, mesylate, malonate, gentisate, salicylate, oxalate or glutarate, preferably maleate, fumarate, L-tartrate, citrate, L-malate, salicylate or oxalate.
In some embodiments, the pharmaceutical salt of the compound as shown in formula (Ia) is selected from maleate, and the molar ratio of the compound as shown in formula (Ia) to the maleate is about 1:1, 1:1.5, 1:2, 1:2.5 or 1:3.
In some embodiments, the pharmaceutical salt of the compound as shown in formula (I) has a structure as shown in formula (II).
The present invention further provides a compound as shown in formula (II) below,
The present invention further provides a crystal form I of the compound as shown in formula (II), wherein the crystal form I has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 5.96°±0.2°, 9.30°±0.2°, 11.86°±0.2°, 15.80°±0.2°, 21.75°±0.2° and 23.93°±0.2° 2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form I of the compound as shown in formula (II) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 3.98°±0.2°, 7.65°±0.2°, 10.87°±0.2°, 16.88°±0.2°, 17.89°±0.2° and 26.21°±0.2°±2θ, as determined by using Cu-Kα radiation.
More preferably, the crystal form I of the compound as shown in formula (II) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 15.29°±0.2°, 17.33°±0.2°, 18.55°±0.2°, 19.21°±0.2°, 19.91°±0.2° and 22.41°±0.2°±20, as determined by using Cu-Kα radiation.
More preferably, the crystal form I of the compound as shown in formula (II) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 4.72°±0.2°, 9.58°±0.2°, 9.92°±0.2°, 12.85°±0.2°, 13.37°±0.2°, 13.75°±0.2°, 14.45°±0.2°, 27.37°±0.2°, 28.43°±0.2°, 30.27°±0.2°, 31.51°±0.2° and 34.21°±0.2°±20, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form I of the compound as shown in formula (II) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form I of the compound as shown in formula (II) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides an amorphous form of the compound as shown in formula (II), which, as determined by using Cu-Kα radiation, has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the amorphous form of the compound as shown in formula (II) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form II of the compound as shown in formula (II), wherein the crystal form II has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 3.980±0.2°, 6.35°±0.2°, 8.100±0.2°, 9.66°±0.2°, 12.21°±0.2°, 15.79°±0.2°, 16.75°±0.2° and 19.390±0.2° 2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form II of the compound as shown in formula (II) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 12.78°±0.2°, 16.33°±0.2°, 17.13°±0.2°, 17.41°±0.2°, 20.45°±0.2°, 21.43°±0.2°, 23.23°±0.2°, 24.65°±0.20 and 25.75°±0.2° 2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form II of the compound as shown in formula (II) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form II of the compound as shown in formula (II) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides an amorphous form of the compound as shown in formula (Ia), which, as determined by using Cu-Kα radiation, has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the amorphous form of the compound as shown in formula (Ia) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form I of the compound as shown in formula (Ia), wherein the crystal form I has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 8.32°±0.2°, 15.69°±0.2°, 16.41°±0.2°, 17.57°±0.2°, 18.89°±0.2° and 19.75°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form I of the compound as shown in formula (Ia) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 10.94°±0.2°, 11.90°±0.2°, 13.30°±0.2°, 14.39°±0.2°, 16.67°±0.2°, 17.24°±0.2°, 18.00°±0.2°, 21.25°±0.2°, 22.27°±0.2°, 23.85°±0.2° and 26.45°±0.2°2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form I of the compound as shown in formula (Ia) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form I of the compound as shown in formula (Ia) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form II of the compound as shown in formula (Ia), wherein the crystal form II has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 4.98°±0.2°, 7.86°±0.2°, 13.72°±0.2°, 17.65°±0.2° and 20.01°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form II of the compound as shown in formula (Ia) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 5.48°±0.2°, 13.43°±0.2°, 14.93°±0.2°, 15.90°±0.2°, 16.57°±0.2°, 16.95°±0.2°, 21.29°±0.2°, 22.05°±0.2°, 24.97°±0.2° and 25.77°±0.2°2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form II of the compound as shown in formula (Ia) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form II of the compound as shown in formula (Ia) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form III of the compound as shown in formula (Ia), wherein the crystal form III has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 5.02°±0.2°, 8.04°±0.2°, 16.91°±0.2°, 17.23°±0.2°, 18.19°±0.2°, 19.41°±0.2° and 20.03°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form III of the compound as shown in formula (Ia) has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 12.36°±0.2°, 14.60°±0.2°, 15.03°±0.2°, 15.73°±0.2°, 20.57°±0.2°, 21.31°±0.2° and 25.45°±0.2°2θ, as determined by using Cu-Kα radiation.
More preferably, the crystal form III of the compound as shown in formula (Ia) has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 5.19°±0.2°, 16.32°±0.2°, 18.75°±0.2°, 19.73°±0.2°, 21.91°±0.2°, 22.41°±0.2°, 23.48°±0.2°, 23.95°±0.2° and 26.33°±0.2°2θ, as determined by using Cu-Kα radiation.
More preferably, the crystal form III of the compound as shown in formula (Ia) has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 10.34°±0.2°, 24.85°±0.2°, 26.93°±0.2°, 27.57°±0.2°, 28.41°±0.2°, 29.59°±0.2°, 30.19°±0.2°, 31.77°±0.2°, 33.13°±0.2° and 35.75°±0.2°2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form III of the compound as shown in formula (Ia) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form III of the compound as shown in formula (Ia) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form I of the compound as shown in formula (Ib), wherein the crystal form I has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 4.38°±0.2°, 8.66°±0.2°, 13.06°±0.2°, 14.34°±0.2°, 18.18°±0.2°, 20.28°±0.2° and 21.82°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form I of the compound as shown in formula (Ib) has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 11.92°±0.2°, 12.74°±0.2° and 17.44°±0.2°2θ, as determined by using Cu-Kα radiation.
More preferably, the crystal form I of the compound as shown in formula (Ib) has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 9.76°±0.2°, 11.26°±0.2°, 14.14°±0.2°, 17.04°±0.2°, 23.23°±0.2°, 24.06°±0.2°, 25.26°±0.2° and 26.42±0.2°2θ, as determined by using Cu-Kα radiation. In some embodiments, the crystal form I of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form I of the compound as shown in formula (Ib) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form II of the compound as shown in formula (Ib), wherein the crystal form II has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 5.12°±0.2°, 6.68°±0.2°, 16.50°±0.2° and 20.18°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form II of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 9.98°±0.2°, 13.44°±0.2°, 13.86°±0.2°, 15.34°±0.2°, 22.40°±0.2° and 23.12°±0.2°2θ, as determined by using Cu-Kα radiation.
More preferably, the crystal form II of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 15.76°±0.2°, 20.99°±0.2°, 24.14°±0.2° and 26.28°±0.2°2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form II of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form II of the compound as shown in formula (Ib) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form III of the compound as shown in formula (Ib), wherein the crystal form III has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 7.48°±0.2°, 12.24°±0.2°, 20.50°±0.2° and 25.77°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form III of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 15.59°±0.2°, 18.74°±0.2° and 23.85°±0.2°2θ, as determined by using Cu-Kα radiation.
More preferably, the crystal form III of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 14.95°±0.2°, 16.18°±0.2°, 16.70°±0.2°, 19.00°±0.2° and 21.39°±0.2°2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form III of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form III of the compound as shown in formula (Ib) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a crystal form IV of the compound as shown in formula (Ib), wherein the crystal form IV has an X-ray powder diffraction pattern comprising characteristic diffraction peaks at 3.92°±0.2°, 8.7°±0.2°, 15.54°±0.2° and 18.22°±0.2°2θ, as determined by using Cu-Kα radiation.
Preferably, the crystal form IV of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at 7.76°±0.2°, 10.48°±0.2°, 12.46°±0.2°, 16.79°±0.2°, 18.94°±0.2° and 19.67°±0.2°2θ, as determined by using Cu-Kα radiation.
In some embodiments, the crystal form IV of the compound as shown in formula (Ib) of the present invention has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the crystal form IV of the compound as shown in formula (Ib) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides an amorphous form of the compound as shown in formula (Ib), which, as determined by using Cu-Kα radiation, has an X-ray powder diffraction pattern substantially as shown in
In some embodiments, the amorphous form of the compound as shown in formula (Ib) of the present invention has a differential scanning calorimetry (DSC) curve as shown in
The present invention further provides a method for preparing a pharmaceutical salt of a compound as shown in formula (I), wherein the method comprises: a step of allowing the compound as shown in formula (I) and an acid to form a salt.
In some embodiments of the method for preparing the compound as shown in formula (I) of the present invention, the solvent used therein is selected from one or more of a C1-6 halogenated alkane solvent, a C2-6 ester solvent, a C2-6 ether solvent, a C1-6 alcohol solvent or water, preferably one or more of dichloromethane, 1,2-dichloroethane, ethyl acetate, methanol, ethanol, isopropanol, diethyl ether, tetrahydrofuran and water, more preferably one or more of dichloromethane, methanol, ethanol and water.
In some embodiments of the method for preparing the compound as shown in formula (I) of the present invention, the method comprises: a step of allowing the compound as shown in formula (Ia) and an acid to form a salt, wherein the acid is selected from maleic acid, fumaric acid, halogen acid (preferably hydrobromic acid and hydrochloric acid), sulfuric acid, phosphoric acid, L-tartaric acid, citric acid, L-malic acid, hippuric acid, D-glucuronic acid, glycolic acid, mucic acid, succinic acid, lactic acid, orotic acid, pamoic acid, glycine, alanine, arginine, cinnamic acid, benzoic acid, benzenesulfonic acid, p-toluenesulfonic acid, acetic acid, propionic acid, valeric acid, triphenylacetic acid, L-proline, ferulic acid, 2-hydroxyethanesulfonic acid, mandelic acid, nitric acid, methanesulfonic acid, malonic acid, gentisic acid, salicylic acid, oxalic acid or glutaric acid.
In some embodiments of the method for preparing the maleate of the compound as shown in formula (I) of the present invention, the method comprises: allowing the compound as shown in formula (Ia) and maleic acid to form a salt, and preparing a compound as shown in formula (II).
The present invention further provides a method for preparing a crystal form of a compound as shown in formula (Ia), (Ib) or (II), wherein the method comprises a step of preparing the compound as shown in formula (II), (Ia) or (Ib) in any crystal form or the compound as shown in formula (II), (Ia) or (Ib) in an amorphous form by means of recrystallization or slurrying, wherein a solvent for the recrystallization or slurrying is selected from one of or a mixed solvent of two or more of a C2-6 ester solvent, a C2-6 ether solvent, a C1-6 alcohol solvent, a C1-6 nitrile solvent, an alkane solvent and water. The solvent for the recrystallization or slurrying is preferably one of or a mixed solvent of two or more of ethyl acetate, isopropyl acetate, n-heptane, acetonitrile, tetrahydrofuran, trifluoroethanol, methanol, ethanol and water.
In some embodiments of the method for preparing the crystal form of the compound as shown in formula (Ia), (Ib) or (II) of the present invention, the recrystallization or slurrying is performed at a temperature of 4° C. to 100° C., preferably room temperature to 90° C., more preferably 40° C. to 90° C.
In some embodiments of the method for preparing the crystal form I of the compound as shown in formula (II) of the present invention, the method comprises steps of mixing the compound as shown in formula (II) with a suitable solvent to form a suspension, heating, stirring and slurrying the mixture, leaving the resulting product to stand for crystallization, and performing filtering and separation, wherein the solvent is preferably ethanol, and the slurrying is performed at a temperature of preferably 90° C.
In some embodiments of the method for preparing the crystal form III of the compound as shown in formula (Ia) of the present invention, the method comprises steps of mixing the compound as shown in formula (Ia) in an amorphous form with a suitable solvent, heating, stirring and slurrying the mixture, and performing filtering and separation, wherein the solvent is preferably an acetonitrile/water mixed solvent, and the slurrying is performed at a temperature of preferably 40° C.
In another aspect, the present invention further provides a pharmaceutical composition, wherein the pharmaceutical composition contains a therapeutically effective amount of the compound or the crystal according to any one of the present invention as described above, and a pharmaceutically acceptable excipient.
In yet another aspect, the present invention further provides use of the pharmaceutical salt of the compound as shown in formula (I) or the crystals of the compounds as shown in formula (Ia), (Ib) and (II) and the pharmaceutical composition in the preparation of a drug for treating and/or preventing tumor.
In yet another aspect, the present invention further provides a method for treating and/or preventing tumor. The method comprises administering a therapeutically effective amount of the pharmaceutical salt of the compound as shown in formula (I) or the crystals of the compounds as shown in formula (Ia), (Ib) and (II) and the pharmaceutical composition.
It can be understood that the expression “preferably, . . . has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at . . . 2θ” or “more preferably, . . . has an X-ray powder diffraction pattern further comprising characteristic diffraction peaks at . . . 2θ” and other similar expressions of the present invention means that in addition to comprising characteristic diffraction peaks at 2θ positions described above, the X-ray powder diffraction pattern further comprises characteristic diffraction peaks at “2θ positions described below”.
Other patterns substantially the same as the X-ray powder diffraction pattern, DSC pattern or TGA pattern disclosed in the present invention also fall within the scope of the present invention.
Unless stated to the contrary, the terms used in the description and claims have the following meanings.
The “therapeutically effective amount” means an amount that causes a physiological or medical response in a tissue, system or subject and is a desirable amount, including the amount of a compound that is, when administered to a subject to be treated, sufficient to prevent occurrence of one or more symptoms of the disease or condition to be treated or to reduce the symptom(s) to a certain degree.
The “IC50” refers to the half maximal inhibitory concentration, i.e., a concentration where half of the maximum inhibitory effect is achieved.
The “ether solvent” of the present invention refers to a chain compound or a cyclic compound containing an ether bond —O— and having 1 to 10 carbon atoms, and the specific examples thereof include, but are not limited to: tetrahydrofuran, diethyl ether, propylene glycol methyl ether, methyl tert-butyl ether, isopropyl ether or 1,4-dioxane.
The “alcohol solvent” of the present invention refers to a group derived from “C1-6 alkyl” on which one or more hydrogen atoms are substituted with one or more “hydroxyl groups”, wherein the “hydroxyl group” and “C1-6 alkyl” are as defined above, and the specific examples thereof include, but are not limited to: methanol, ethanol, isopropanol, n-propanol, isopentanol or trifluoroethanol.
The “ester solvent” of the present invention refers to a combination of a lower organic acid containing 1-4 carbon atoms and a lower alcohol containing 1-6 carbon atoms, and the specific examples thereof include, but are not limited to: ethyl acetate, isopropyl acetate or butyl acetate.
The “ketone solvent” of the present invention refers to a compound in which a carbonyl group (—C(O)—) is connected to two hydrocarbon groups. According to the difference of hydrocarbon groups in molecules, ketones can be divided into aliphatic ketone, alicyclic ketone, aromatic ketone, saturated ketone and unsaturated ketone, and the specific examples thereof include, but are not limited to: acetone, acetophenone and 4-methyl-2-pentanone.
The “nitrile solvent” of the present invention refers to a group derived from “C1-6 alkyl” on which one or more hydrogen atoms are substituted with one or more “cyano groups”, wherein the “cyano group” and “C1-6 alkyl” are as defined above, and the specific examples thereof include, but are not limited to: acetonitrile or propionitrile.
The “halogenated hydrocarbon solvent” of the present invention refers to a group derived from “C1-6 alkyl” on which one or more hydrogen atoms are substituted with one or more “halogen atoms”, wherein the “halogen atom” and “C1-6 alkyl” are as defined above, and the specific examples thereof include, but are not limited to: dichloromethane, 1,2-dichloroethane, chloroform or carbon tetrachloride.
As used in the present invention, “the crystal of the present invention”, “the crystal form of the present invention”, “the polymorph of the present invention” and the like can be used interchangeably.
The “room temperature” of the present invention generally refers to 4° C. to 30° C., preferably 20° C.±5° C.
The structure of the crystal form of the present invention can be analyzed by using various analytical techniques known to those skilled in the art, including but not limited to X-ray powder diffraction (XRD), differential scanning calorimetry (DSC) and/or thermogravimetric analysis (TGA). Thermogravimetric analysis (TGA) is also called as thermogravimetry (TG).
The X-ray powder diffractometer (XRD) used in the present invention is Bruker D8 Advance diffractometer, using Ka radiation (40 Kv, 40 mA) with a copper target wavelength of 1.54 Å, a 0-2θ goniometer, a Mo monochromator, and an Lynxeye detector, using Al2O3 as a calibration material, Diffrac Plus XRD Commander as an acquisition software, and MDI Jade 6 as an analysis software; the method parameters involve: a non-reflective sample plate at 24.6 mm diameter×1.0 mm thickness, manufactured by MTI corporation; a variable-temperature hot stage, manufactured by Shanghai Weitu Instrument Technology Development Co., Ltd., using a copper plate as a sample plate; a detection angle of 3-40° 2θ/3-30° 2θ (hot-stage XRPD); and a step length of 0.02° 2θ.
The differential scanning calorimeter (DSC) used in the present invention is TA Instruments Q200 DSC or DSC 3, operated under nitrogen protection with a gas flow rate of 50 mL/min.
The thermogravimetric analyzer (TGA) used in the present invention is TA Instruments Q500 TGA or TGA/DSC 3+, operated under nitrogen protection with a gas flow rate of 40 m/min or 50 m/min.
The “2θ or 2θ angle” of the present invention refers to a diffraction angle, wherein 0 is the Bragg angle in the unit of ° or degree, and the error range of the 2θ can be ±0.3, ±0.2 or ±0.1.
It can be understood that the numerical values described and claimed in the present invention are approximate values. Changes in values may be attributed to device calibration, device errors, crystal purity, crystal size, sample size and other factors.
It can be understood that the crystal forms of the present invention are not limited to the characteristic patterns such as XRD, DSC and TGA which are completely identical to those described in the drawings disclosed in the present invention, and any crystal form having a characteristic pattern which is essentially or substantially the same as those described in the drawings falls within the scope of the present invention.
It can be understood that, as is well known in the field of differential scanning calorimetry (DSC), a melting peak height of a DSC curve depends on many factors related to sample preparation and geometric shapes of instruments, and a peak position is relatively insensitive to experiment details. Therefore, in some embodiments, the crystallized compounds of the present invention are characterized in that DSC patterns comprising characteristic peak positions have substantially the same properties as the DSC patterns provided in the drawings of the present invention, with an error tolerance of ±3° C.
The crystal forms disclosed in the present invention can be prepared by the following common methods for preparing crystal forms:
The implementation process and beneficial effects of the present invention are described in detail below through specific examples, which are intended to help readers better understand the essence and characteristics of the present invention, and are not intended to limit the scope of implementation of the present invention.
3-(4-phenoxyphenyl)-1-(piperidin-4-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine (1a) (see J. Med. Chem. 2015, 58, 9625-9638 for a synthetic method) (11.0 g, 28.5 mmol) was dissolved in 100 mL of 1,2-dichloroethane. Tert-butyl 3-oxoazetidine-1-carboxylate (9.74 g, 56.9 mmol) and glacial acetic acid (3.42 g, 57.0 mmol) were sequentially added. Upon completion of the addition, the reaction was carried out at 65° C. for 3 h. The reaction liquid was cooled to room temperature. Sodium triacetoxyborohydride (12.1 g, 57.1 mmol) was added. Upon completion of the addition, the reaction was carried out at room temperature overnight. The pH was adjusted to 9-10 by dropwise adding a saturated sodium bicarbonate solution to the reaction liquid. The resulting solution was concentrated under reduced pressure, and then the crude product was separated and purified by silica gel column chromatography (dichloromethane/methanol (v/v)=100:0 to 19:1) to obtain tert-butyl 3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidine-1-carboxylate (1b) (7.20 g, yield: 47%).
LCMS m/z=542.3 [M+1]+
Tert-butyl 3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidine-1-carboxylate (1b) (7.20 g, 13.3 mmol) was dissolved in 15 mL of dichloromethane. 50 mL of 4 N ethyl acetate hydrochloride solution and 10 mL of anhydrous methanol were added. The resulting mixture was stirred at room temperature for 2 h. The reaction liquid was concentrated under reduced pressure, and then 20 mL of dichloromethane was added to the residue. The pH was adjusted to 9-10 by using a saturated sodium bicarbonate solution. Liquid separation was performed. The aqueous layer was extracted (100 mL×3) with methanol/dichloromethane (v/v=1:10), and the organic layers were combined, dried over anhydrous sodium sulfate and concentrated under reduced pressure to obtain 1-[1-(azetidin-3-yl)-4-piperidyl]-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine (1c) (5.80 g, yield: 99%).
LCMS m/z=442.2 [M+1]+
1-[1-(azetidin-3-yl)-4-piperidyl]-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine (1c) (5.80 g, 13.1 mmol) was dissolved in 25 mL of 1,2-dichloroethane. Tert-butyl 3-oxoazetidine-1-carboxylate (4.50 g, 26.3 mmol) and glacial acetic acid (1.58 g, 26.3 mmol) were sequentially added. Upon completion of the addition, the reaction was carried out at 65° C. for 3 h. The reaction liquid was cooled to room temperature. Sodium triacetoxyborohydride (5.57 g, 26.3 mmol) was added. Upon completion of the addition, the reaction was carried out at room temperature overnight. The pH was adjusted to 9-10 by dropwise adding a saturated sodium bicarbonate solution to the reaction liquid. The resulting solution was concentrated under reduced pressure, and then the crude product was separated and purified by silica gel column chromatography (dichloromethane/methanol (v/v)=100:0 to 19:1) to obtain tert-butyl 3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidine-1-carboxylate (1d) (3.60 g, yield: 46%).
LCMS m/z=597.3 [M+1]+
Tert-butyl 3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidine-1-carboxylate (1d) (3.60 g, 6.03 mmol) was dissolved in 5 mL of dichloromethane. 5 mL of trifluoroacetic acid was added. The resulting mixture was stirred at room temperature for 2 h. The reaction liquid was concentrated under reduced pressure, and then 20 mL of dichloromethane was added to the residue. The pH was adjusted to 9-10 by using a saturated sodium bicarbonate solution. Liquid separation was performed. The aqueous layer was extracted with 100 mL of dichloromethane, and the organic layers were combined, dried over anhydrous sodium sulfate and concentrated under reduced pressure to obtain 1-[1-[1-(azetidin-3-yl)azetidin-3-yl]-4-piperidyl]-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine (1e) as a crude product (3.0 g).
LCMS m/z=497.3 [M+1]+
The above crude product of 1-[1-[1-(azetidin-3-yl)azetidin-3-yl]-4-piperidyl]-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-4-amine (1e) (3.00 g) was dissolved in 15 mL of dimethylsulfoxide. 2-(2,6-dioxopiperidin-3-yl)-5-fluoroisoindoline-1,3-dione (see WO 2017197056 for a synthetic method) (2.00 g, 7.25 mmol) and diisopropylethylamine (3.90 g, 30.2 mmol) were sequentially added. Upon completion of the addition, the reaction was carried out at 90° C. for 2 h. The reaction liquid was cooled to room temperature, and 10 mL of water was slowly added dropwise. Filtration was performed. The filter cake was dissolved in 50 mL of dichloromethane, and then washed with 15 mL of saturated sodium chloride solution. Liquid separation was performed. The organic layers were dried over anhydrous sodium sulfate and concentrated under reduced pressure, and then the crude product was separated and purified by silica gel column chromatography (dichloromethane/methanol (v/v)=100:0 to 19:1), and the purified product solution obtained by column chromatography was directly concentrated under reduced pressure to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (2.90 g, the two-step yield calculated from compound Id: 64%),
which is an amorphous form (yellow solid) of compound 1 as analyzed by XRD, DSC and TGA. Reference was made to
1H NMR (400 MHz, CDCl3) δ 9.99 (s, 1H), 8.39 (s, 1H), 7.72-7.57 (m, 3H), 7.45-7.32 (m, 2H), 7.21-7.11 (m, 3H), 7.10-7.04 (m, 2H), 6.78 (d, 1H), 6.52 (dd, 1H), 5.81 (brs, 2H), 4.92 (dd, 1H), 4.87-4.71 (m, 1H), 4.08-3.99 (m, 2H), 3.94-3.83 (m, 2H), 3.76-3.65 (m, 1H), 3.64-3.49 (m, 2H), 3.20-3.04 (m, 3H), 3.00-2.64 (m, 5H), 2.52-2.34 (m, 2H), 2.18-1.89 (m, 5H).
LCMS m/z=377.3 [M/2+1]+
8 mL of ethyl acetate was added to the amorphous form (40 mg) of compound 1 prepared in example 1 to obtain a clear solution. The solution was exposed to an atmosphere at 40° C. and volatilized to obtain a crystal form I (yellow solid) of compound 1. The crystal form I of compound 1 was characterized by XRD, DSC and TGA. Reference was made to
6 mL of ethanol was added to the amorphous form (200 mg) of compound 1 prepared in example 1. Crystal slurrying was performed at room temperature for 3 days. Centrifugation was performed, and then the solid was dried under vacuum overnight at room temperature to obtain a crystal form II (yellow solid) of compound 1. The crystal form II of compound 1 was characterized by XRD, DSC and TGA. Reference was made to
6 mL of acetonitrile and 6 mL of water were added to the amorphous form (400 mg) of compound 1 prepared in example 1. The resulting solution was stirred at 40° C. for 72 h, and suction filtration was performed. The filter cake was collected and dried under vacuum overnight at 40° C. to obtain a crystal form III (yellow solid) of compound 1. The crystal form III of compound 1 was characterized by XRD, DSC and TGA. Reference was made to
3-(4-phenoxyphenyl)-1-(piperidin-4-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine (1a) (see J. Med. Chem. 2015, 58, 9625-9638 for a synthetic method) (10.42 g, 26.97 mmol) was dissolved in 200 mL of 1,2-dichloroethane. Tert-butyl 4-oxopiperidine-1-carboxylate (13.43 g, 67.42 mmol) and glacial acetic acid (4.2 g, 67.42 mmol) were sequentially added. The resulting solution was heated to 65° C., stirred for 2 h and cooled to room temperature, and sodium triacetoxyborohydride (34.29 g, 161.79 mmol) was added. The reaction was carried out under stirring at room temperature for 16 h. After TLC showed the reaction was completed, the reaction liquid was left to stand. 50 mL of 2 M aqueous solution of sodium hydroxide was added. The pH was adjusted to 8-9 by using a saturated sodium bicarbonate solution. The resulting mixture was allowed to stand for layer separation. The aqueous phase was extracted with dichloromethane (200 mL×3), and the organic phases were combined, washed once with a saturated brine (300 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product. The crude product was purified by column chromatography (200-300 mesh silica gel, dichloromethane/methanol (v/v)=100/1 to 15/1) to obtain tert-butyl 4-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]piperidine-1-carboxylate (2a) (10.72 g, yield: 70%).
Tert-butyl 4-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]piperidine-1-carboxylate (2a) (45 g, 92.48 mmol) was added to a reaction flask. 410 mL of dichloromethane was added and dissolved under stirring, and then 80 mL of trifluoroacetic acid was added. The reaction was carried out under stirring at room temperature overnight. After the reaction was completed, the reaction liquid was concentrated under reduced pressure to obtain an oil. 500 mL of dichloromethane was added. The pH was adjusted to 10 by slowly adding a 2 mol/L sodium hydroxide solution dropwise under stirring. Liquid separation was performed. The aqueous phase was extracted with dichloromethane (400 mL×3), and the organic phases were combined. The organic layer was washed with a 15% aqueous solution of sodium chloride (500 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain 3-(4-phenoxyphenyl)-1-[1-(4-piperidyl)-4-piperidyl]pyrazolo[3,4-d]pyrimidin-4-amine (2b) (29.3 g, yield: 82%).
3-(4-phenoxyphenyl)-1-[1-(4-piperidyl)-4-piperidyl]pyrazolo[3,4-d]pyrimidin-4-amine (2b) (29.3 g, 0.076 mol) was added to 1,2-dichloroethane (0.5 L). 1-Boc-3-azetidinone (37.7 g, 0.189 mol), acetic acid (11.4 g, 0.189 mol) and anhydrous sodium sulfate (30 g) were sequentially added. Upon completion of the addition, sodium triacetoxyborohydride (96.3 g, 0.45 mol) was slowly added. The reaction was carried out under stirring at room temperature for 2 h. The reaction liquid was poured into a 2 L plastic beaker. Ice was added, and the pH was adjusted to 12-13 by using a 2 M aqueous solution of sodium hydroxide. The resulting mixture was allowed to stand for layer separation. The aqueous phase was extracted with dichloromethane (400 mL×3), and the organic phases were combined, washed with a saturated brine (600 mL), dried over anhydrous sodium sulfate, filtered and concentrated under reduced pressure to obtain a crude product. The crude product was purified by column chromatography (200-300 mesh silica gel, dichloromethane/methanol (v/v)=100/0 to 12/1) to obtain tert-butyl 3-(4-(4-amino-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)-[1,4′-bipiperidin]-1′-yl)azetidine-1-carboxylate (2c) (35 g, yield: 81%).
Tert-butyl 3-(4-(4-amino-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)-[1,4′-bipiperidin]-1′-yl)azetidine-1-carboxylate (2c) (25 g, 0.04 mmol) was added to a reaction flask. 125 mL of dichloromethane was added, and 50 mL of trifluoroacetic acid was slowly added dropwise. Upon completion of the addition, the reaction was carried out under stirring at room temperature for 2 h. After the reaction was completed, the reaction liquid was concentrated under reduced pressure to obtain an oil. 200 mL of methyl tert-butyl ether was added under stirring, with a white solid gradually precipitated. Stirring was performed for crystallization at room temperature for 1 h. The resulting product was filtered and concentrated under reduced pressure to obtain 1-(1′-(azetidin-3-yl)-[1,4′-bipiperidin]-4-yl)-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine trifluoroacetate (2d) (50 g, yield: 99%).
2-(2,6-dioxopiperidin-3-yl)-5-fluoroisoindoline-1,3-dione (see WO 2017197056 for a synthetic method) (10.3 g, 0.037 mmol), N,N′-diisopropylethylamine (40 g, 0.31 mmol) and dimethylsulfoxide (0.2 L) were sequentially added to 1-(1′-(azetidin-3-yl)-[1,4′-bipiperidin]-4-yl)-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine trifluoroacetate (2d) (48 g, 0.031 mmol). The reaction was carried out under stirring at 120° C. for 3 h. The reaction liquid was cooled to room temperature with ice water, and water (0.2 L) was added to the reaction liquid under stirring, with a large amount of solids precipitated. The resulting mixture was continuously stirred for 30 min, filtered and dried with suction. The filter cake was dissolved in 0.5 L of dichloromethane under stirring, washed with concentrated ammonia water (200 mL×3), dried over anhydrous sodium sulfate and filtered. The filtrate was concentrated under reduced pressure, and the residue was separated and purified by silica gel column chromatography (dichloromethane/methanol (v/v)=100/0 to 94/6) to collect the product. Ethyl acetate (0.28 L) was added to the above product obtained by column chromatography. The resulting mixture was slurried under stirring for 20 h and filtered. The filter cake was dried under vacuum at 45° C. for 92 h to obtain 5-(3-(4-(4-amino-3-(4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl)-[1,4′-bipiperidin]-1′-yl)azetidin-1-yl)-2-(2,6-dioxopiperidin-3-yl)isoindoline-1,3-dione (compound 2) (17 g, yield: 72%),
which is a crystal form I (yellow solid) of compound 2 as analyzed by XRD, DSC and TGA. Reference was made to
1H NMR (400 MHz, CDCl3) δ 10.22 (brs, 1H), 8.39 (s, 1H), 7.67-7.60 (m, 3H), 7.42-7.34 (m, 2H), 7.19-7.10 (m, 3H), 7.10-7.04 (m, 2H), 6.78 (d, 1H), 6.51 (dd, 1H), 5.89 (brs, 2H), 4.96-4.88 (m, 1H), 4.83-4.70 (m, 1H), 4.14-4.04 (m, 2H), 3.92-3.84 (m, 2H), 3.39-3.30 (m, 1H), 3.18-3.04 (m, 2H), 3.00-2.91 (m, 2H), 2.90-2.65 (m, 3H), 2.56-2.32 (m, 5H), 2.16-2.01 (m, 3H), 2.01-1.84 (m, 4H), 1.73-1.59 (m, 2H).
LC-MS m/z=781.4 [M+1]+.
2.8 mL of tetrahydrofuran and 1.4 mL of water were added to the crystal form I (210 mg) of compound 2. The resulting mixture was heated and stirred at 60° C. to obtain a clear solution. The solution was stirred at 4° C. overnight, with a solid precipitated. Suction filtration was performed under reduced pressure. The resulting product was dried under vacuum at room temperature for about 3 h to obtain a crystal form II (yellow solid) of compound 2. The crystal form II of compound 2 was characterized by XRD, DSC and TGA. Reference was made to
14 mL of water and 1.4 mL of tetrahydrofuran were added to the crystal form I (210 mg) of compound 2. Crystal slurrying was performed at 4° C. for 3 days. The resulting product was filtered with suction to dryness under reduced pressure to obtain a crystal form III (yellow solid) of compound 2. The crystal form III of compound 2 was characterized by XRD, DSC and TGA. Reference was made to
1 mL of isopropyl acetate and 1 mL of n-heptane were added to the crystal form I (30 mg) of compound 2. Crystal slurrying was performed at room temperature for 3 days. Centrifugation was performed, and then the sample was dried under vacuum at room temperature for about 5 h to obtain a crystal form IV (yellow solid) of compound 2. The crystal form IV of compound 2 was characterized by XRD, DSC and TGA. Reference was made to
5 mL of dichloromethane was added to the crystal form I (400 mg) of compound 2. The resulting mixture was heated to obtain a clear solution. Filtration was performed. The filtrate was concentrated to dryness under reduced pressure at 40° C. to obtain an amorphous form (yellow solid) of compound 2. The amorphous form of compound 2 was characterized by XRD, DSC and TGA. Reference was made to
Dichloromethane (10 mL) was added to 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (1.0 g, 1.33 mmol). The mixture was stirred at room temperature until a clear solution was obtained. A solution of maleic acid (0.309 g, 2.66 mmol) in methanol (1 mL) was added dropwise, during which a solid was gradually precipitated. The resulting mixture was continuously stirred at room temperature for 3 h, and then suction filtration was performed under reduced pressure. The filter cake was washed with 10 mL of dichloromethane, collected and then concentrated under reduced pressure at 40° C. to remove the residual solvent, so as to obtain 0.96 g of a crude product. 20 mL of ethanol was added to the above crude product. The resulting mixture was heated at 90° C. and slurried under stirring for 0.5 h. The suspension was cooled to room temperature for crystallization for 2 h. Suction filtration was performed under reduced pressure. The filter cake was washed with 10 mL of ethanol, collected and then concentrated under reduced pressure at 40° C. to remove the residual solvent, so as to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)]pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione dimaleate (compound 3) (0.62 g, yield: 47%), which is a crystal form I (yellow solid) of compound 3 as analyzed by XRD, DSC and TGA. Reference was made to
1H NMR (400 MHz, DMSO-d6) δ 11.06 (s, 1H), 8.27 (s, 1H), 7.72-7.63 (m, 3H), 7.48-7.41 (m, 2H), 7.24-7.09 (m, 5H), 6.86 (d, 1H), 6.72 (dd, 1H), 6.15 (s, 4H), 5.06 (dd, 1H), 5.01-4.86 (m, 1H), 4.24-4.12 (m, 2H), 4.11-3.93 (m, 3H), 3.92-3.79 (m, 2H), 3.77-3.59 (m, 3H), 3.37-3.22 (m, 2H), 2.98-2.68 (m, 3H), 2.65-2.51 (m, 2H), 2.46-2.31 (m, 2H), 2.18-2.06 (m, 2H), 2.06-1.96 (m, 1H).
50 mL of trifluoroethanol and 50 mL of dichloromethane were sequentially added to compound 3 (300 mg) (crystal form I) to obtain a clear solution. The solution was concentrated to dryness under reduced pressure at 40° C. to obtain an amorphous form (yellow solid) of compound 3, which is an amorphous form of compound 3 as analyzed by XRD, DSC and TGA. Reference was made to
6.0 mL of methanol and 4.0 mL of water were added to compound 3 (150 mg) (crystal form I). The resulting mixture was placed in a water bath at 70° C. to obtain a clear solution. The solution was stirred at 4° C. overnight, with a solid precipitated. Suction filtration was performed under reduced pressure. The resulting product was dried under vacuum at room temperature overnight to obtain a crystal form II (yellow solid) of compound 3,
which is a crystal form II of compound 3 as analyzed by XRD, DSC and TGA. Reference was made to
Dichloromethane (8 mL) was added to 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (0.40 g, 0.531 mmol). The mixture was stirred at room temperature until a clear solution was obtained. A solution of L-malic acid (0.28 g, 2.09 mmol) in methanol (0.5 mL) was added dropwise, during which a viscous solid was gradually precipitated. The resulting mixture was continuously stirred at room temperature for 2 h, and then concentrated under reduced pressure at 40° C. Ethanol (10 mL) was added to the residue. The resulting mixture was heated to 90° C., stirred for 1 h, then cooled to room temperature and stirred for 2 h. Suction filtration was performed. The filter cake was dried under vacuum at 50° C. for 18 h to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione L-malate (compound 4) (yellow solid) (0.41 g, yield: 81%).
1H NMR (400 MHz, DMSO-d6) δ 11.05 (s, 1H), 8.24 (s, 1H), 7.70-7.61 (m, 3H), 7.48-7.40 (m, 2H), 7.23-7.08 (m, 5H), 6.80 (d, 1H), 6.67 (dd, 1H), 5.05 (dd, 1H), 4.77-4.64 (m, 1H), 4.21 (dd, 1.5H), 4.11-4.02 (m, 2H), 3.88-3.80 (m, 2H), 3.76-3.66 (m, 1H), 3.55-3.46 (m, 2H), 3.16-3.04 (m, 3H), 3.00-2.80 (m, 3H), 2.65-2.52 (m, 3H), 2.49-2.38 (m, 2H), 2.31-2.07 (m, 4H), 2.06-1.89 (m, 3H).
Dichloromethane (8 mL) was added to 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (0.40 g, 0.531 mmol). The mixture was stirred at room temperature until a clear solution was obtained. A solution of citric acid monohydrate (0.45 g, 2.14 mmol) in methanol (0.7 mL) was added dropwise, during which a viscous solid was gradually precipitated. The resulting mixture was continuously stirred at room temperature for 2 h, and then concentrated under reduced pressure at 40° C. Ethanol (10 mL) was added to the residue. The resulting mixture was heated to 90° C., stirred for 1 h, then cooled to room temperature and stirred for 2 h. Suction filtration was performed. The filter cake was dried under vacuum at 50° C. for 18 h to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione citrate (compound 5) (yellow solid) (0.48 g, yield: 87%).
1H NMR (400 MHz, DMSO-d6) δ 11.06 (s, 1H), 8.25 (s, 1H), 7.70-7.63 (m, 3H), 7.48-7.40 (m, 2H), 7.23-7.09 (m, 5H), 6.82 (d, 1H), 6.68 (dd, 1H), 5.06 (dd, 1H), 4.83-4.71 (m, 1H), 4.15-4.04 (m, 2H), 3.91-3.74 (m, 3H), 3.64-3.53 (m, 2H), 3.33-3.20 (m, 3H), 3.09-2.96 (m, 2H), 2.94-2.82 (m, 1H), 2.79-2.53 (m, 8H), 2.40-2.20 (m, 4H), 2.07-1.91 (m, 3H).
5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (0.500 g, 0.664 mmol) was dissolved in dichloromethane (5 mL). Anhydrous methanol (1.25 mL) and fumaric acid (0.616 g, 5.31 mmol) were sequentially added. The resulting mixture was stirred at room temperature for 7 h and then filtered. The filter cake was collected, and anhydrous ethanol (15 mL) was added to the filter cake. The resulting product was heated to 80° C., stirred for 2 h, cooled to room temperature and filtered. The filter cake was dried under vacuum at 50° C. for 16 h to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione fumarate (compound 6) (yellow solid) (0.400 g, yield: 69%).
1H NMR (400 MHz, DMSO-d6) δ 11.05 (s, 1H), 8.23 (s, 1H), 7.70-7.60 (m, 3H), 7.47-7.40 (m, 2H), 7.23-7.09 (m, 5H), 6.79 (d, 1H), 6.66 (dd, 1H), 6.62 (s, 2H), 5.05 (dd, 1H), 4.74-4.62 (m, 1H), 4.09-4.01 (m, 2H), 3.86-3.78 (m, 2H), 3.71-3.62 (m, 1H), 3.50-3.40 (m, 2H), 3.08-2.97 (m, 3H), 2.94-2.82 (m, 3H), 2.64-2.46 (m, 2H), 2.29-2.14 (m, 2H), 2.12-1.86 (m, 5H).
5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (0.500 g, 0.664 mmol) was dissolved in dichloromethane (5 mL). Anhydrous methanol (0.75 ml) and L-tartaric acid (0.399 g, 2.66 mmol) were sequentially added. The resulting mixture was stirred at room temperature for 4 h and then filtered. The filter cake was collected, and anhydrous ethanol (15 mL) was added to the filter cake. The resulting product was heated to 80° C., stirred for 2 h, cooled to room temperature and filtered. The filter cake was dried under vacuum at 50° C. for 16 h to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione L-tartrate (compound 7) (yellow solid) (0.510 g, yield: 79%).
1H NMR (400 MHz, DMSO-d6) δ 11.06 (s, 1H), 8.24 (s, 1H), 7.70-7.61 (m, 3H), 7.48-7.40 (m, 2H), 7.23-7.09 (m, 5H), 6.80 (d, 1H), 6.67 (dd, 1H), 5.06 (dd, 1H), 4.78-4.65 (m, 1H), 4.28 (s, 3H), 4.11-4.02 (m, 2H), 3.88-3.79 (m, 2H), 3.76-3.66 (m, 1H), 3.56-3.40 (m, 2H), 3.18-3.04 (m, 3H), 2.98-2.80 (m, 3H), 2.65-2.46 (m, 2H), 2.35-1.87 (m, 7H).
10 mL of an ethanol/water (v/v=4:1) mixed solvent was added to 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (0.400 g, 0.531 mmol). The mixture was heated to 80° C. until complete dissolution. Salicylic acid (0.293 g, 2.12 mmol) was added. The resulting mixture was continuously stirred at 80° C. until a clear solution was obtained. The solution was cooled to 60° C., stirred for 1 h, then cooled to room temperature and stirred for 2 h for crystallization. Suction filtration was performed. The filter cake was collected, and 10 mL of an ethanol/water (v/v=4/1) mixed solvent was added to the filter cake. The resulting product was heated to 80° C., stirred until the solid was dissolved, then cooled to room temperature and stirred for 2 h for crystallization. Filtration was performed. The filter cake was collected and dried under vacuum at 50° C. for 16 h to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione salicylate (compound 8) (yellow solid) (0.140 g, yield: 30%).
1H NMR (400 MHz, DMSO-d6) δ 11.05 (s, 1H), 8.24 (s, 1H), 7.78-7.59 (m, 4H), 7.48-7.40 (m, 2H), 7.39-7.31 (m, 1H), 7.24-7.08 (m, 5H), 6.85-6.74 (m, 3H), 6.65 (dd, 1H), 5.06 (dd, 1H), 4.87-4.73 (m, 1H), 4.15-4.04 (m, 2H), 3.95-3.77 (m, 3H), 3.70-3.58 (m, 2H), 3.41-3.28 (m, 3H), 3.14-3.01 (m, 2H), 2.95-2.81 (m, 1H), 2.65-2.46 (m, 2H), 2.45-2.22 (m, 4H), 2.07-1.94 (m, 3H).
5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione (compound 1) (0.500 g, 0.664 mmol) was dissolved in dichloromethane (10 mL). A solution of oxalic acid dihydrate (0.335 g, 2.66 mmol) in methanol (2 mL) was slowly added dropwise. The resulting mixture was stirred at room temperature for 4 h and then filtered. The filter cake was collected, and anhydrous ethanol (12 mL) was added to the filter cake. The resulting product was heated to 80° C., stirred for 2 h, and cooled to room temperature. Filtration was performed. The filter cake was collected and dried under vacuum at 50° C. for 16 h to obtain 5-[3-[3-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]-1-piperidyl]azetidin-1-yl]azetidin-1-yl]-2-(2,6-dioxo-3-piperidyl)isoindoline-1,3-dione oxalate (compound 9) (yellow solid) (0.480 g).
1H NMR (400 MHz, DMSO-d6) δ 11.06 (s, 1H), 8.26 (s, 1H), 7.71-7.62 (m, 3H), 7.49-7.39 (m, 2H), 7.24-7.09 (m, 5H), 6.84 (d, 1H), 6.70 (dd, 1H), 5.06 (dd, 1H), 4.95-4.83 (m, 1H), 4.21-4.09 (m, 2H), 4.06-3.91 (m, 3H), 3.88-3.74 (m, 2H), 3.70-3.55 (m, 3H), 3.30-3.16 (m, 2H), 2.96-2.81 (m, 1H), 2.74-2.46 (m, 4H), 2.44-2.28 (m, 2H), 2.15-1.94 (in, 3H).
The compounds of the present invention were subjected to X-ray powder diffraction tests according to the following methods. The test parameters of the amorphous form and crystal forms I, II and III of compound 1 were as shown in Table 1-1, the test parameters of the crystal forms I, II, III and IV and amorphous form of compound 2 were as shown in Table 1-1, and the test parameters of the crystal forms I and II and amorphous form of compound 3 were as shown in Table 1-2. The test results were as shown in
DSC patterns were collected on TA Instruments Q200 DSC and DSC 3 differential scanning calorimeters. The test parameters of compound 1 and compound 2 were as shown in Table 2-1, and the test parameters of compound 3 were as shown in Table 2-2. The test results were as shown in
TGA patterns were collected on TA Instruments Q500 TGA and TGA/DSC 3+ thermogravimetric analyzers. The test parameters of compound 1 and compound 2 were as shown in Table 3-1, and the test parameters of compound 3 were as shown in Table 3-2. The test results were as shown in
The X-ray powder diffraction (XRD) pattern of the crystal form I of compound 1 was as shown in
The X-ray powder diffraction (XRD) pattern of the crystal form II of compound 1 was as shown in
The X-ray powder diffraction (XRD) pattern of the crystal form III of compound 1 was as shown in
The X-ray powder diffraction (XRD) patterns of the crystal form I of compound 2 were as shown in
The X-ray powder diffraction (XRD) patterns of the crystal form II of compound 2 were as shown in
The X-ray powder diffraction (XRD) patterns of the crystal form III of compound 2 were as shown in
The X-ray powder diffraction (XRD) patterns of the crystal form IV of compound 2 were as shown in
The X-ray powder diffraction (XRD) pattern of the crystal form I of compound 3 was as shown in
The X-ray powder diffraction (XRD) pattern of the crystal form II of compound 3 was as shown in
Samples were taken and tested at high temperature (40° C.) and under high humidity (RH 92.5%) respectively. The purity (represented by a percentage) was detected by HPLC. The experimental results were as shown in Table 16.
With regard to methods for preparing test solutions and conditions for detecting purity by HPLC, reference was made to Tables 13, 14 and 15.
Conclusion: the amorphous form and crystal form III of compound 1 and the pharmaceutical salts (e.g., crystal form I of compound 3, compound 5 and compound 9) of compound 1 had relatively good chemical stability.
6.1. Stability of crystal form of compound 1 and compound 3. See table 17.
Conclusion: the amorphous form and crystal forms I, II and III of compound 1 and the amorphous form and crystal forms I and II of compound 3 had relatively good stability.
6.2. Competitive experiments of crystal forms I, II and III of compound 1 were performed at room temperature to investigate the stability of the crystal forms in isopropyl acetate and a water/acetonitrile (v/v=1:1) solvent, and Competitive experiments of the crystal forms I and II of compound 3 were performed at room temperature to investigate the stability of the crystal forms in an ethanol/water (v/v=1:1) solvent and an acetone/water (v/v=1:1) solvent. See Table 18 for details.
It can be seen from the above crystal slurrying competition experiments of the crystal forms of compound 1 that the crystal form III was the most stable crystal form of compound 1 at room temperature. It can be seen from the above crystal slurrying competition experiments of the crystal forms of compound 3 that the crystal form I was the most stable crystal form of compound 3 at room temperature.
Conclusion: compound 1 and the pharmaceutical salts thereof had a certain level of solubility in water at 25° C. The solubility of the pharmaceutical salts of compound 1 (such as the crystal form I of compound 3, compound 4, compound 5, compound 7 and compound 9) was significantly improved as compared with the solubility of compound 1, by more than about 15 times.
The Mino human mantle cell lymphoma cell line was purchased from ATCC and cultured under conditions of RPMI-1640+15% FBS+1% double antibody in a 37° C., 5% CO2 incubator. Cells were plated in a 6-well plate, with 5×105 cells/well. After plating, compounds at different concentrations were added and cultured in a 37° C., 5% CO2 incubator for 48 h. After culturing, the cells were collected. The cells were lysed on ice for 15 minutes by adding RIPA lysis buffer (Beyotime, Cat. P0013B) and centrifuged at 12000 rpm at 4° C. for 10 minutes. The protein sample of the supernatant was collected, subjected to protein quantification by using a BCA kit (Beyotime, Cat. P0009) and then diluted to 0.25 mg/mL. The expressions of BTK (CST, Cat. 85475) and the internal reference β-actin (CST, Cat. 37005) were detected using a fully automated western blot quantitative analyzer (Proteinsimple) with a kit (Protein simple, Cat. SM-W004). The expression level of BTK relative to the internal reference was calculated by using Compass software, and the DC50 value was calculated by using Origen9.2 software according to formula (1). Specifically, the BTKadministration denoted the expression level of BTK in administration groups at different doses, and the BTKvehicle denoted the expression level of BTK in the vehicle control group.
BTK %=BTKadministration/BTKvehicle×100 formula (1)
Conclusion: compound 1 and compound 2 had a significant degradation effect on BTK in Mino cells.
Female ICR mice, 6-8 weeks old, were purchased from Beijing Vital River Laboratory Animal Technology Co., Ltd., and the experiment was started after 3 days of adaptation. After 3 consecutive days of intragastric administration of compounds at different doses, the spleens of mice were taken. The spleen cells were collected, lysed on ice for 15 min by adding RIPA lysis buffer (Beyotime, Cat. P0013B), and then centrifuged at 12000 rpm at 4° C. for 10 min. The protein sample of the supernatant was collected, subjected to protein quantification by using a BCA kit (Beyotime, Cat. P0009) and then diluted to 0.25 mg/mL. The expressions of BTK (CST, Cat. 8547S) and the internal reference R-actin (CST, Cat. 3700S) were detected by using a fully automated western blot quantitative analyzer (Proteinsimple). The expression level of BTK relative to the internal reference was calculated by using Compass software, and the DD50 value was calculated by using Origen9.2 software according to formula (2). Specifically, the BTKadministration denoted the expression level of BTK in administration groups at different doses, and the BTKvehicle denoted the expression level of BTK in the vehicle control group.
BTK %=BTKadministration/BTKvehicle×100% formula (2)
Conclusion: compound 1 and compound 2 had a significant degradation effect on BTK proteins in spleens of mice.
Kinases BTK wt (Carna, Cat. No 08-180) and BTK C481S (Carna, Cat. No 08-547) were prepared into a 2.5× kinase solution, and substrates FAM-P2 (GL Biochem, Cat. No. 112394) and ATP ((Sigma, Cat. No. A7699-1G) were prepared into a 2.5× substrate solution, respectively. 5 μL of compounds at different concentrations were added to a 384-well plate. 10 μL of 2.5× kinase solution was added, and the resulting mixture was incubated at room temperature for 10 min. 10 μL of 2.5× substrate solution was added, and the mixture was incubated at 28° C. for an appropriate period of time. The reaction was stopped by adding 30 μL of stop buffer, and the detection was carried out by using Caliper EZ reader2. The IC50 value was calculated by using XLFit excel add-in version 5.4.0.8 software. The calculation formula of the inhibition rate was shown in formula (3), wherein max denoted the readout of the DMSO control, min denoted the readout of the negative control, and conversion denoted the readout of the compound
Inhibition rate %=(max-conversion)/(max-min)*100%. formula (3)
Conclusion: compound 1 had a significant inhibitory effect on BTK wt/C481S kinase.
Experimental objective: in this experiment, a single dose of each test compound was administered to Beagle dogs intravenously and intragastrically, the concentrations of the test compounds in plasma of dogs were measured, and the pharmacokinetic characteristics and bioavailability of the test compounds in dogs were evaluated.
Experimental animal: male Beagle dogs (about 8-11 kg, 0.5-1 weeks old, 6 dogs/compound), purchased from Beijing Marshall Biotechnology Co. Ltd.
Experimental method: as shown in Table 23, on the day of the experiment, 6 Beagle dogs were randomly according to their body weight. The animals were fasted but with water available for 14 to 18 hours one day before administration, and were fed 4 hours after administration.
Sampling: before and after administration, 1.0 ml of blood was taken from jugular veins, and placed in an EDTAK2 centrifuge tube. Centrifugation was carried out at 5000 rpm at 4° C. for 10 m, and the plasma was collected.
Time points for plasma collection in G1& G2 groups: 0, 5 min, 15 min, 30 mi 1 h, 2 h, 4 h, 6 h, 8 h, 10 h, 2 h and 24 h.
Before analysis and detection, all samples were stored at −80° C. The samples were detected by using HPLC-MS/MS.
Conclusion: compound 1 and pharmaceutical salts thereof had a certain level of oral bioavailability in dogs. Oral exposure amounts of the crystal form I of compound 3, compound 5, compound 7 and compound 9 were significantly increased as compared with the oral exposure amount of compound 1, by more than 2 times.
| Number | Date | Country | Kind |
|---|---|---|---|
| 202010933538.3 | Sep 2020 | CN | national |
| 202110869600.1 | Aug 2021 | CN | national |
| Filing Document | Filing Date | Country | Kind |
|---|---|---|---|
| PCT/CN2021/117174 | 9/8/2021 | WO |
