Scalable Secure Sharable Computation Platform for Proteomics Data Analysis

Information

  • Research Project
  • 7433587
  • ApplicationId
    7433587
  • Core Project Number
    R43HG004622
  • Full Project Number
    1R43HG004622-01
  • Serial Number
    4622
  • FOA Number
    PAR-07-160
  • Sub Project Id
  • Project Start Date
    5/1/2008 - 16 years ago
  • Project End Date
    4/30/2010 - 14 years ago
  • Program Officer Name
    BONAZZI, VIVIEN
  • Budget Start Date
    5/1/2008 - 16 years ago
  • Budget End Date
    4/30/2010 - 14 years ago
  • Fiscal Year
    2008
  • Support Year
    1
  • Suffix
  • Award Notice Date
    4/30/2008 - 16 years ago
Organizations

Scalable Secure Sharable Computation Platform for Proteomics Data Analysis

[unreadable] DESCRIPTION (provided by applicant): A novel distribution platform for an open source proteomic database and computational analysis system is proposed. The proposed platform will enable inter-institutional collaboration in the study of biological mechanisms and measurement of complex protein systems. Installation is an initial and sometimes insurmountable barrier to open source software adoption, especially for state of the art database systems such as CPAS. We propose to create a hosted CPAS server platform to eliminate installation and maintenance issues for both software and hardware, thus increasing the open source bioinformatics tools adoption rate and drastically reducing total cost of ownership for open source bioinformatics tools like CPAS. Virtual cluster technology also offers new solutions to the security, scalability, and ease of use problems that have hampered proteomics collaborations to date. This proposed system builds on a successful collaboration of experts in proteomics and software development, and marks the one of the first major use of virtual cluster technology in proteomics. PUBLIC HEALTH RELEVANCE: The aim of this research is to enable a new proteomics technology that will both lower the cost of proteomics experiments and lower the barriers to collaboration between research institutions. A successful outcome would increase the potential health benefit of a broad array of current and future research. [unreadable] [unreadable] [unreadable] [unreadable]

IC Name
NATIONAL HUMAN GENOME RESEARCH INSTITUTE
  • Activity
    R43
  • Administering IC
    HG
  • Application Type
    1
  • Direct Cost Amount
  • Indirect Cost Amount
  • Total Cost
    188555
  • Sub Project Total Cost
  • ARRA Funded
  • CFDA Code
    172
  • Ed Inst. Type
  • Funding ICs
    NHGRI:188555\
  • Funding Mechanism
  • Study Section
    ZRG1
  • Study Section Name
    Special Emphasis Panel
  • Organization Name
    INSILICOS
  • Organization Department
  • Organization DUNS
    126643241
  • Organization City
    SEATTLE
  • Organization State
    WA
  • Organization Country
    UNITED STATES
  • Organization Zip Code
    98103
  • Organization District
    UNITED STATES