The present invention relates to a device and a method for amplifying a signal generated from primary nanoparticle labels in an assay. The present invention further relates to relates to a use of a combination of a primary and secondary nanoparticle labels for amplifying a signal generated from the primary nanoparticle label in an assay.
A part of health care research involves developing easy to use molecular diagnostics, for molecules such as DNA, RNA, proteins, peptides, hormones, metabolites, drugs etc as well as to determine the activity and function of active and catalytic biomolecules such as, prions, enzymes, aptamers, ribozymes, and deoxyribozymes and to identify cells including human tissue, human cells, bacteria and viruses.
Magnetic biosensors are used for detecting biological targets labeled with superparamagnetic particles. Several label formats can be implemented for the detection of biological analyte. These include the direct assay, in which a labeled analyte binds to the sensor; the sandwich assay, in which an analyte binds to the sensor followed by the binding of a moiety containing the label; and the competitive or inhibition assay in which an analyte competes with the sensor surface for binding to a labeled moiety.
The direct assay is used for analytes that are easily directly labeled such as PCR amplicons in nucleic acid assays. The sandwich assay is most well-known for giving a low detection limit and high specificity. However, it requires a target analyte to have available sites for the binding of two moieties. Small molecules such as drugs, metabolites, hormones, poisons (e.g. toxins) and vitamins cannot accommodate two binding moieties and thus the competitive assay is preferred. In the case of the sandwich assay the amount of labels detected is directly related to the concentration of the target on the sensor whereas in the case of competitive assay, the amount of label is related to the concentration of free binding sites on the sensor, which decreases with analyte concentration.
The limit of sensitivity of an assay is given by:
R
det=2*s.db
where Rdet is the limit of sensitivity, and s.db is the standard deviation of the signal resulting from the instrumental background and non-specific binding. In order to increase the sensitivity of the assay and thus be able to detect lower concentrations, the signal at these concentrations must be at least Rdet, preferably much higher. The signal detected by a magnetic label is proportional to the density of labels on the sensor and the volume of the magnetic content on the label. Increasing the density of labels bound to the sensor can be achieved by enhancing the efficiency of binding between the components of the assay and by improving the speed and effectiveness of label binding to the surface. However, by increasing the magnetic volume of labels by using large labels (>1 μm diameter) in an assay would increase the contribution in signal per label, but is disadvantageous, since the final stage in the assay requires the binding of the magnetic label on the sensor surface. This process can be very slow and inefficient for larger labels due to steric hindrance and to the reduced surface (for binding to the sensor surface) to volume ratio of larger labels compared to smaller labels. As a consequence even though the signal per label increases with label diameter, the number of labels that contribute to the signal decreases.
The object of the present invention is to overcome the above mentioned drawbacks by increasing the sensitivity of an assay and thus enable a detection of lower concentrations.
According to one aspect the present invention relates to a device for amplifying a signal generated from primary nanoparticle labels in an assay, comprising:
a separation means for maintaining at least secondary nanoparticle labels separated from the primary nanoparticle labels, wherein the secondary nanoparticle labels are adapted to bind to the primary nanoparticle labels, and
a control unit for controlling the releasing of the secondary labels into the assay
wherein at least one of the primary and secondary nanoparticle labels are magnetic labels.
Thereby, a device is provided that is capable of amplifying the generated signal produced by the nanoparticle labels since the density of the labels to be detected, and thus the signal, is increased because one or more secondary labels can bind to a single primary label. It follows that low concentrations of analyte, e.g. <nM, may easily be detected. A further advantage is that the primary labels attaching to the detection surface can be small, thereby reducing the steric hindrance and increasing the surface area per gram of label that can bind to the biosensor surface. The primary labels may be labels that are bound to a target in a solution, or targets attached to a biosensor surface. This binding may take place through intermediate binding groups. According to the present invention, the term nanoparticle label may include particles in the micrometer range, but typically the particles are from several hundred nanometers down to few nanometers, or even a fraction of a nanometer. Also, the geometry of the nanoparticles can be various. The term separation means according to the present invention means physical separation, e.g. where the primary or the secondary labels are in a reservoir, or a chemical separation, i.e. the primary and the secondary labels can not bind together.
In an embodiment, the separation means is selected from a group consisting of:
a reservoir that is physically isolated from a chamber containing the primary or the secondary nanoparticle labels,
a second surface adapted to host the secondary nanoparticle labels via external force fields or via chemical binding force, and a force mechanism for applying the external force,
a second surface adapted to host the secondary nanoparticle labels via external force fields or via chemical binding force, an encapsulating layer of inert labels for generating an inert layer covering the surface of the secondary nanoparticle labels on the second surface, and a force mechanism for applying the external force,
an encapsulation means and an encapsulate remover for releasing the labels from the encapsulation means, and
a reservoir comprising a complex containing the binding means for providing the binding member necessary for binding the primary and the secondary labels together, and
a second surface comprising a complex containing the binding means for providing the binding member necessary for binding the primary and the secondary labels together and an encapsulation means for encapsulating the complex and encapsulation remover for removing the encapsulation means from the complex.
In an embodiment, the primary nanoparticle labels comprise two or more different types of nanoparticle labels in a multi-analyte assay.
In an embodiment, the at least secondary nanoparticle labels comprise additionally tertiary nanoparticle labels, quaternary nanoparticle labels etc. that are separated from each other, wherein the tertiary nanoparticle labels are adapted to bind the secondary nanoparticle labels, the quaternary nanoparticle labels to the are adapted to bind the tertiary nanoparticle labels etc. Since the number of binding sites for the secondary label to the primary label is limited, additional bindings of tertiary labels to the secondary label etc. will allow further amplification of the sensor signal.
In an embodiment, the at least one secondary nanoparticle labels comprises one or more different types of secondary nanoparticle labels. In that way, the secondary nanoparticle labels are capable of binding to various binding types of labels or to various binding sites on the same primary label.
In a preferred embodiment, the primary and secondary nanoparticle labels are magnetic labels, the device further comprising magnetic field producer for generating a magnetic field and thereby inducing magnetic moments in the labels and preferably a biosensor including a surface for detecting the field produced by the labels. Magnetic labels have the advantage that they can be actuated in a magnetic field. In this way they can be actively moved from one location to another. This property can be used for example to enhance the speed at which particles reach the sensor surface, though an attractive force, and for removal of labels that are not bound or are weakly bound to the sensor surface, through a force in the opposite direction. Biosensors that detect magnetic moment have the additional advantage that biological matrices are hardly magnetic and thus do not contribute to background signals.
In an embodiment, the biosensor comprises a GMR, TMR, AMR, or Hall device for detecting the produced field.
In an embodiment, the labels are selected from a group consisting of: metal nanoparticles, semi conducting nanoparticles, polymeric nanoparticles containing a dye, carbon nanoparticles, and magnetic particles containing a dye label wherein at least one of the primary or secondary labels is a magnetic label.
According to another aspect, the present invention further relates to a method of amplifying a signal generated from a primary nanoparticle labels in an assay, the method comprising:
maintaining at least secondary nanoparticle labels separated from the primary nanoparticle labels, wherein the secondary nanoparticle labels are adapted to bind to the primary nanoparticle labels, and
controlling the release of the secondary labels into the assay and allowing the secondary label to bind to the primary labels,
wherein at least one of the primary and secondary nanoparticle labels are magnetic labels
Accordingly, due to the large overall signal contribution per primary label, a low concentration of analyte (<nM) can easily be detected.
In an embodiment, the assay is selected from a group consisting of:
a sandwich assay,
a direct assay, and
a competitive or inhibition assay,
nucleic acid assays, and
enzyme activity assays.
Accordingly, generated signal produced by the nanoparticle labels can be amplified independent of the type of assay.
In an embodiment, the diameter of the secondary label is smaller than that of the primary label. It follows that steric hindrance is further reduced. However, the diameter of the secondary label can just as well be similar as that for the primary label, or even larger.
In an embodiment, the primary labels are bound to a surface of a biosensor comprised in the assay.
In an embodiment, the releasing of the secondary labels into the assay is performed subsequently after the primary labels are bound to a surface of a biosensor comprised in the assay.
In an embodiment, the releasing of the secondary labels into the assay is performed subsequently after the primary labels are bound to a surface of a biosensor comprised in the assay and subsequently after unbound or weakly bound primary labels to the biosensor are removed.
In an embodiment, prior to detection the generated signal the primary and the secondary labels that are unbound or weekly bound to a surface of a biosensor comprised in the assay are removed form the assay.
According to still another aspect, the present invention also relates to a use of a combination of a primary and secondary nanoparticle labels for amplifying a signal generated from the primary nanoparticle label in an assay, wherein the at least one secondary nanoparticle label are adapted to be attached to the to the primary labels and thereby act as an amplifying agent and wherein at least one of the primary and secondary nanoparticle labels are magnetic labels
In an embodiment the primary and at least one secondary nanoparticle labels are magnetic labels and wherein the signal is a magnetic field produced by the labels.
In an embodiment, the use comprises detecting drugs selected from a group consisting of; cannabis, ecstasy, methamphetamine, methadone and amphetamine, cocaine, crack and heroin in a body fluid sample.
In an embodiment, the use comprises detecting proteins, small molecules such as glucose, hormones, toxins, steroids, vitamins and metabolites, peptides, nucleic acids such as DNA and RNA.
The aspects of the present invention may each be combined with any of the other aspects. These and other aspects of the invention will be apparent from and elucidated with reference to the embodiments described hereinafter.
Embodiments of the invention will be described, by way of example only, with reference to the drawings, in which
The amplification is obtained by attaching one or more of the secondary magnetic labels to the primary magnetic labels. As shown, the device comprises separation means (S_U) 101, a control unit (C_U) 102, typically a magnetic sensor, a magnetic field producer (F_P) 104 and a biosensor 103 including a surface for detecting the field produced by the labels 203. The sensor can be any suitable sensor to detect the presence of magnetic particles on or near to a sensor surface, based on any property of the particles, e.g. it can detect via magnetic methods (e.g. magnetoresistive, Hall, coils), optical methods (imaging, fluorescence, chemiluminescence, absorption, scattering, surface plasmon resonance, Raman, etc.), sonic detection (surface acoustic wave, bulk acoustic wave, cantilever, quartz crystal etc), electrical detection (e.g. conduction, impedance, amperometric, redox cycling), etc. The separation means (S_U) 101 is adapted for separating the secondary labels from the primary labels and in that way seal off the secondary labels from the biosensor 103. The separation may comprise a physical separation, e.g. in the form of a reservoir, or a chemical separation where the labels can not be chemically bound together. The control unit (C_U) 102 is adapted to control the releasing of the secondary labels from the reservoir separation means (S_M) 101. The field producer (F_P) 104 can either be an internal or an external unit and can comprise wires where the magnetic field produced is produced by the current in the wires, electromagnetic coils, and permanent magnets. The field producer is adapted to generate a magnetic field 106 in order to induce magnetic moments in the labels 203, 204. The biosensor 103 then detects the field produced 107 by the labels, e.g. by using Giant Magnetor Resistive element (GMR), Tunneling Magnetic Resistive element (TMR), Anisotropic Magneto Resistive element (AMR), Hall element, and the like.
The diameter of the primary magnetic labels may be few nanometers up to several hundred nanometers, or even up to the micron range. In an embodiment, the nanoparticles labels are made of polymer enclosing small grains of iron oxide and form a matrix of iron oxide, and therefore have super-paramagnetic properties. The material properties of the magnetic labels could however be such that the labels have para- or ferromagnetic properties.
The binding moieties on the surface of the primary 204 and the secondary 203 labels are in one embodiment achieved by functionalizing the surface of the labels 203, 204 by e.g. coating them with or carrying out surface reactions to create reactive functional groups such as carboxylic acid, amine, tosyl, aldehyde, maleimide, thiol or epoxy. The result of such coating provides the reactive groups for the immobilization of binding moieties including biological molecules such as avidin, biotin, antibodies, peptides, aptamers, and oligonucleotides. Such binding moieties can also be modified so that they react more easily with the reactive groups on the surface. For example carboxylic acid groups react with amine groups which can occur naturally on proteins and peptides but these amine groups can also be added to oligonucleotides and aptamers to enable their immobilization on carboxylated surfaces.
It should be noted that the embodiment shown here is so-called sandwich assay where the target 303 is sandwiched between moiety 304 on the biosensor surface 103 and moiety 302 that is coupled to the primary label 203, i.e. the target analyte must have two available sites for binding. The scenario as illustrated in
The secondary label 204 comprises in this embodiment one type of binding moiety 309 that is suitable to bind with the binding moiety 301 on the primary label. The number of binding moieties on the secondary label 204 could of course comprise more than one type of binding moieties, wherein each respective binding moiety could be adapted to a specific binding moiety on the primary label (and also tertiary moiety).
The arrow 308 illustrates the opening of the reservoir, i.e. releasing of the secondary labels 204 into the main chamber 206. The right side of
Furthermore, to speed up binding of the secondary labels 204, they can be attracted to the desired location containing the primary labels 203, i.e. the sensor surface 103 with a magnetic field. Removal of unbound or weakly bound secondary labels 204 can be achieved with a magnetic force away from the sensor surface 203. Furthermore, the type of label to be attracted to a certain location can be discriminated by the frequency of the actuation field. Labels of a particular type can be magnetized at higher filed frequencies then labels of another type. By using high frequency field it is possible to attract one type of labels, while not affecting labels of another type. The detection of the particles would typically be done using a field frequency where both labels are magnetized.
Instead of using magnetic field and utilize the magnetic properties, the separation means (S_M) 101 could just as well comprise a surface having such surface properties that the secondary labels 204 will be attached to, wherein the step of releasing the labels from the surface 401 comprises supplying heat energy to the surface 401 (such that the energy followed by the heat exceeds the binding energy between the label and the surface). Accordingly, a computer controlled heater may just as well be implemented to control the releasing of the secondary labels 204. An additional method to attract the secondary labels 204 to the surface 401 can be due to electrostatic attraction, wherein the step of releasing the labels from the surface 401 comprises application of a current or voltage to surface 401 at a level and sign that removes the electrostatic attraction force and/or provides an electrostatic repulsive force.
The complex can be released from a physically isolated reservoir 1001 as shown here or activated and released from an encapsulation layer similar to that as described previously. The control unit (C_U) 102 may be adapted to control the reservoir 1001, e.g. by controlling the flow of the complexes 1002 from the reservoir into the main chamber.
Certain specific details of the disclosed embodiment are set forth for purposes of explanation rather than limitation, so as to provide a clear and thorough understanding of the present invention. However, it should be understood by those skilled in this art, that the present invention might be practiced in other embodiments that do not conform exactly to the details set forth herein, without departing significantly from the spirit and scope of this disclosure. Further, in this context, and for the purposes of brevity and clarity, detailed descriptions of well-known apparatuses, circuits and methodologies have been omitted so as to avoid unnecessary detail and possible confusion.
Reference signs are included in the claims, however the inclusion of the reference signs is only for clarity reasons and should not be construed as limiting the scope of the claims.
Number | Date | Country | Kind |
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06115479.5 | Jun 2006 | EP | regional |
Filing Document | Filing Date | Country | Kind | 371c Date |
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PCT/IB2007/052237 | 6/13/2007 | WO | 00 | 6/9/2009 |