Substituted alkyldiamines

Information

  • Patent Application
  • 20040067927
  • Publication Number
    20040067927
  • Date Filed
    November 07, 2003
    22 years ago
  • Date Published
    April 08, 2004
    22 years ago
Abstract
The invention relates to novel compounds which are substituted alkyldiamino derivatives of formula (I). The invention also concerns related aspects including processes for the preparation of the compounds, pharmaceutical compositions containing one or more compounds of formula (I) and especially their use as inhibitors of the plasmodium falciparum protease plasmepsin II or related aspartic proteases.
Description


[0001] The invention relates to novel compounds which are substituted alkyldiamino derivatives of the general formula I. The invention also concerns related aspects including processes for the preparation of the compounds, pharmaceutical compositions containing one or more compounds of general formula I and especially their use as inhibitors of the plasmodium falciparum protease plasmepsin II or related aspartic proteases.


BACKGROUND OF THE INVENTION

[0002] Malaria is one of the most serious and complex health problems affecting humanity in the 21st century. The disease affects about 300 million people worldwide, killing 1 to 1.5 million people every year. Malaria is an infectious disease caused by four species of the protozoan parasite Plasmodium, P. falciparum being the most severe of the four. All attempts to develop vaccines against P. falciparum have failed so far. Therefore, therapies and preventive measures against malaria are confined to drugs. However, resistance to many of the currently available antimalarial drugs is spreading rapidly and new drugs are needed.


[0003]

P. falciparum
enters the human body by way of bites of the female anophelino mosquito. The plasmodium parasite initially populates the liver, and during later stages of the infectious cycle reproduces in red blood cells. During this stage, the parasite degrades hemoglobin and uses the degradation products as nutrients for growth [1]. Hemoglobin degradation is mediated by serine proteases and aspartic proteases. Aspartic proteases have been shown to be indispensable to parasite growth. A non-selective inhibitor of aspartic proteases, Pepstatin, inhibits the growth of P. falciparum in red blood cells in vitro. The same results have been obtained with analogs of pepstatin [2], [3]. These results show that inhibition of parasite aspartic proteases interferes with the life cycle of P. falciparum. Consequently, aspartic proteases are targets for antimalarial drug development.


[0004] The present invention relates to the identification of novel low molecular weight, non-peptidic inhibitors of the plasmodium falciparum protease plasmepsin II or other related aspartic proteases to treat and/or prevent malaria.


[0005] The compounds of general formula I were tested against plasmepsin II, HIV-protease, human cathepsin D, human cathepsin E and human renin in order to determine their biological activity and their selectivity profile.



In Vitro Assays

[0006] The fluorescence resonance energy transfer (FRET) assay for HIV, plasmepsin II, human cathepsin D and human cathepsin E.


[0007] The assay conditions were selected according, to reports in the literature [4-7]. The FRET assay was performed in white polysorp plates (Fluoronunc, cat n° 437842 A). The assay buffer consisted of 50 mM Na acetate pH 5, 12,5% glycerol, 0.1% BSA+392 mM NaCl (for HIV-protease). The incubates per well were composed of:


[0008] 160 μl buffer


[0009] 10 μl inhibitor (in DMSO)


[0010] 10 μl of the corresponding substrate in DMSO (see table A) to a final concentration of 1 μM


[0011] 20 μl of enzyme to a final amount of x ng per assay tube (x=10 ng/assay tube plasmepsin II, x=100 ng/assay tube HIV-protease, x=10 ng/assay tube human cathepsin E and x=20 ng/assay tube human cathepsin D)


[0012] The reactions were initiated by addition of the enzyme. The assay was incubated at 37° C. for 30 min (for human cathepsin E), 40 min (for plasmepsin II and HIV-protease) or 120 min (for human cathepsin D). The reactions were stopped by adding 10% (v/v) of a 1 M solution of Tris-base. Product-accumulation was monitored by measuring the fluorescence at 460 nm.


[0013] Auto-fluorescence of all the test substances is determined in assay buffer in the absence of substrate and enzyme and this value was subtracted from the final signal.
1TABLE ASummary of the conditions used for the aspartyl proteasesfluorescent assays. (at = assay tube)substrateenzymesubstrateconcentrationIncubationAspartylconcentrationng/attimeproteasesequenceμM(nM)BufferpHminutesHIVDabcyl-Abu-SQNY:PIVN-EDANS1100 50 mM Na acetate;540(22.5)12.5% glycerol; 0.1% BSA392 mM NaClPlasmepsin IIDabcyl-ERNleF:LSFP-EDANS1 10 50 mM Na acetate;540(1.25)12.5% glycerol; 0.1% BSAh Cathepsin DDabcyl-ERNleF:LSFP-EDANS1 20 50 mM Na acetate;5120(2.5) 12.5% glycerol; 0.1% BSAh Cathepsin EDabcyl-ERNleF:LSFP-EDANS1 10 50 mM Na acetate;630(1.25)12.5% glycerol; 0.1% BSA



Enzymatic in Vitro Assay for Renin

[0014] The enzymatic in vitro assay was performed in polypropylene plates (Nunc, Cat No 4-42587A). The assay buffer consisted of 100 mM sodium phosphate, pH 7.4, including 0.1% BSA. The incubates were composed of 190 μL per well of an enzyme mix and 10 μL of renin inhibitors in DMSO. The enzyme mix was premixed at 4° C. and composed as follows:


[0015] human recombinant renin (0.16 ng/mL)


[0016] synthetic human tetradecapeptide renin substrate (0.5 μM)


[0017] hydroxyquinoline sulfate (0.1 mM)


[0018] The mixtures were then incubated at 37° C. for 3 h.


[0019] To determine the enzymatic activity and its inhibition, the accumulated Angiotensin I was detected by an enzyme immunoassay (EIA). 10 μL of the incubates or standards were transferred to immuno plates which were previously coated with a covalent complex of Angiotensin I and bovine serum albumin (Ang I-BSA). 190 μL of Angiotensin I-antibodies were added and a primary incubation made at 4° C. over night. The plates were washed 3 times and then incubated for one hour at room temperature with a biotinylated anti-rabbit antibody. Thereafter, the plates were washed and incubated at room temperature for 30 min with a streptavidin-peroxidase complex. After washing the plates, the peroxidase substrate ABTS (2,2′-Azino-di-(3-ethyl-benzthiazolinsulfonate), was added and the plates incubated for 10-30 min at room temperature. After stopping the reaction with 0.1 M citric acid pH 4.3 the plate is evaluated in a microplate reader at 405 nm.
2TABLE 1IC50 values (nM) for selected compounds on plasmepsin II:Example Nr:IC50 (nM) on plasmepsin IIExample 1115Example 21469Example 22858Example 23252Example 25596Example 20846Example 38325Example 51691Example 52834Example 53125Example 54312Example 56659Example 57351Example 58754Example 59380Example 60198Example 6157Example 68714Example 698230



References

[0020] 1. Goldberg, D. E., Slater, A. F., Beavis, R., Chait, B., Cerami, A., Henderson, G. B., Hemoglobin degradation in the human malaria pathogen Plasmodium falciparum: a catabolic pathway initiated by a specific aspartic protease; J. Exp. Med., 1991, 173, 961-969.


[0021] 2. Francis, S. E., Gluzman, I. Y., Oksman, A., Knickerbocker, A., Mueller, R., Bryant, M. L., Sherman, D. R., Russell, D. G., Goldberg, D. E., Molecular characterization and inhibition of a Plasmodium falciparum aspartic hemoglobinase; Embo. J., 1994, 13, 306-317.


[0022] 3. Moon, R. P., Tyas, L., Certa, U., Rupp, K., Bur, D., Jaquet, H., Matile, H., Loetscher, H., Grueninger-Leitch, F., Kay, J., Dunn, B. M., Berry, C., Ridley, R. G., Expression and characterization of plasmepsin I from Plasmodium falciparum, Eur. J. Biochem., 1997, 244, 552-560.


[0023] 4. Carroll, C. D., Johnson, T. O., Tao, S., Lauri, G., Orlowski, M., Gluzman, I. Y., Goldberg, D. E., Dolle, R. E., (1998). “Evaluation of a structure-based statine cyclic diamino amide encoded combinatorial library against plasmepsin II and cathepsin D”. Bioorg Med Chem Lett; 8(22), 3203-3206.


[0024] 5. Peranteau, A. G., Kuzmic, P., Angell, Y., Garcia-Echeverria, C., Rich, D. H., (1995). “Increase in fluorescence upon the hydrolysis of tyrosine peptides: application to proteinase assays”. Anal Biochem; 227(1):242-245.


[0025] 6. Gulnik, S. V., Suvorov, L. I., Majer, P., Collins, J., Kane, B. P., Johnson, D. G., Erickson, J. W., (1997). “Design of sensitive fluorogenic substrates for human cathepsin D”. FEBS Lett; 413(2), 379-384.


[0026] 7. Robinson, P. S., Lees, W. E., Kay, J., Cook, N. D., (1992). “Kinetic parameters for the generation of endothelins-1, -2 and -3 by human cathepsin E”. Biochem J; 284 (Pt 2): 407-409.


[0027] 8. J. March, Advanced Organic Chemistry, pp 918-919, and refs. cited therein; 4thEd., John Wiley & Sons, 1992.


[0028] 9. A. Kubo, N. Saito, N. Kawakami, Y. Matsuyama, T. Miwa, Synthesis, 1987, 824-827.


[0029] 10. R. K. Castellano, D. M. Rudkevich, J. Rebek, Jr., J. Am. Chem. Soc., 1996, 118, 10002-10003.


[0030] 11. U. Schöllkopf, Pure Appl. Chem., 1983, 55, 1799-1806 and refs. cited therein; U. Schïllkopf, Top. Curr. Chem., 1983, 109, 65-84 and refs. cited therein; T. Wirth, Angew. Chem. Int. Ed. Engl., 1997, 36, 225-227 and refs. cited therein.


[0031] 12. T. W. Greene, P. G. M. Wutts, Protective groups in organic synthesis; Wiley-Interscience, 1991.


[0032] 13. P. J. Kocienski, Protecting Groups, Thieme, 1994.


[0033] 14. J. A. Radding, Development of Anti-Malarial Inhibitors of Hemoglobinases, Annual Reports in Medicinal Chemistry, 34, 1999, 159-168.


[0034] 15. D. F. Wirth, Malaria: A Third World Disease in Need of First World Drug Development, Annual Reports in Medicinal Chemistry, 34, 1999, 349-358.


[0035] The present invention relates to novel, low molecular weight organic compounds, which are substituted dialkylamines of the general formula I:
1


[0036] wherein


[0037] Q represents —SO2—R5; —CO—R5; —CO—NH—R5; —CO—N(R5)(R6); —CO—OR5; —(CH2)p—R5; —(CH2)p—CH(R5)(R6);


[0038] R1 and R2 represent propyl; butyl; pentyl; hexyl; ω-hydroxy-propyl; ω-hydroxy-butyl; ω-hydroxy-pentyl; ω-hydroxy-hexyl; lower alkoxy-propyl; lower alkoxy-butyl; lower alkoxy-pentyl; lower alkoxy-hexyl; aryl-lower alkyl; cycloalkyl; cycloalkyl-lower alkyl; heterocyclyl; and can be the same or different; or R1 and R2 and the nitrogen atom together can represent a ring such as azetidin; azepan;


[0039] R3 represents lower alkyl; lower alkenyl; aryl; heteroaryl; cycloalkyl; heterocyclyl; aryl-lower alkyl; heteroaryl-lower alkyl; cycloalkyl-lower alkyl; heterocyclyl-lower alkyl; aryl-lower alkenyl; heteroaryl-lower alkenyl; cycloalkyl-lower alkenyl; heterocyclyl-lower alkenyl;


[0040] R4 represents hydrogen; —CH2—OR7; —CO—OR7; lower alkyl;


[0041] R5 and R6 represent lower alkyl; lower alkenyl; aryl; heteroaryl; cycloalkyl; heterocyclyl; aryl-lower alkyl; heteroaryl-lower alkyl; cycloalkyl-lower alkyl; heterocyclyl-lower alkyl; aryl-lower alkenyl; heteroaryl-lower alkenyl; cycloalkyl-lower alkenyl; heterocyclyl-lower alkenyl;


[0042] R7 represents hydrogen, lower alkyl; cycloalkyl; aryl; cycloalkyl-lower alkyl; aryl-lower alkyl;


[0043] t represents the whole numbers 0 (zero) or 1 and in case t represents the whole number 0 (zero), R4 is absent;


[0044] p represents the whole numbers 0 (zero), 1 or 2;


[0045] A represents —CH2)n—;


[0046] n represents the whole numbers 2, 3, 4 or 5;


[0047] and pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates, mixtures of diastereomeric racemates and pharmaceutically acceptable salts thereof.


[0048] In the definitions of the general formula I—if not otherwise stated—the expression lower means straight and branched chain groups with one to seven carbon atoms, preferably 1 to 4 carbon atoms. Examples of lower alkyl groups are methyl, ethyl, n-propyl, iso-propyl, n-butyl, iso-butyl, sec.-butyl, tert.-butyl, pentyl, hexyl, heptyl. Examples of lower alkoxy groups are methoxy, ethoxy, propoxy, iso-butoxy, sec.-butoxy and tert.-butoxy etc. Lower alkylendioxy-groups as substituents of aromatic rings onto two adjacent carbon atoms are preferably methylene-dioxy and ethylene-dioxy. Lower alkylen-oxy groups as substituents of aromatic rings onto two adjacent carbon atoms are preferably ethylen-oxy and propylen-oxy. Examples of lower alkanoyl-groups are acetyl, propanoyl and butanoyl. Lower alkenylen means e.g. vinylen, propenylen and butenylen.


[0049] The expression cycloalkyl, alone or in combination, means a saturated cyclic hydrocarbon ring system with 3 to 6 carbon atoms, e.g. cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl which may be substituted with lower alkyl groups.


[0050] The expression heterocyclyl, alone or in combination, means saturated or unsaturated (but not aromatic) five-, six- or seven-membered rings containing one or two nitrogen, oxygen or sulfur atoms which may be the same or different and which rings may be substituted with lower alkyl, lower alkenyl, aryl; examples of such rings are morpholinyl, piperazinyl, tetrahydropyranyl, dihydropyranyl, 1,4-dioxanyl, pyrrolidinyl, tetrahydrofuranyl, dihydropyrrolyl, imidazolidinyl, dihydropyrazolyl, pyrazolidinyl etc. and substituted derivatives of such type rings with substituents as outlined hereinbefore.


[0051] The expression heteroaryl, alone or in combination, means six-membered aromatic rings containing one to four nitrogen atoms; benzofused six-membered aromatic rings containing one to three nitrogen atoms; five-membered aromatic rings containing one oxygen, one nitrogen or one sulfur atom; benzo-fused five-membred aromatic rings containing one oxygen, one nitrogen or one sulfur atom; five membered aromatic rings containing one oxygen and one nitrogen atom and benzo fused derivatives thereof; five membred aromatic rings containing a sulfur and nitrogen or oxygen atom and benzo fused derivatives thereof; five membered aromatic rings containing three nitrogen atoms and benzo fused derivatives thereof or the tetrazolyl ring; examples of such rings are furanyl, thienyl, pyrrolyl, pyridinyl, indolyl, quinolinyl, isoquinolinyl, dihydroquinolinyl, tetrahydroquinolinyl, tetrahydroisoquinolinyl, imidazolyl, triazinyl, thiazinyl, pyridazinyl, oxazolyl, and the like, whereby such ring systems may be mono-, di- or tri-substituted with aryl; aryloxy, aryl-lower alkoxy, lower alkyl; lower alkenyl; lower alkyl-carbonyl; amino; lower alkyl-amino; bis-(lower-alkylyamino; lower alkanoyl-amino; lower alkyl-sulfonamido; aryl-sulfonamido, heteroaryl-sulfonamido; lower alkyl-sulfono; aryl-sulfono; ω-amino-lower alkyl; halogen; hydroxy; carboxyl; lower alkoxy; vinyloxy; allyloxy; ω-hydroxy-lower alkyl; nitro; cyano; amidino; trifluoromethyl; lower alkyl-sulfonyl.


[0052] The expression aryl, alone or in combination, means six membered aromatic rings and condensed systems like naphthyl or indenyl, whereby such ring systems may be mono-, di- or tri-substituted with aryl, aryloxy, aryl-lower alkyloxy, lower alkyl, lower alkenylen, lower alkyl-carbonyl, aryl-carbonyl, amino, lower alkyl-amino, aryl-amino, bis-(lower-alkyl)-amino, lower alkanoyl-amino, lower alkyl-sulfonamido, aryl-sulfonamido, heteroaryl-sulfonamido, lower alkyl-sulfono, aryl-sulfono, ω-amino-lower alkyl, halogen, hydroxy, carboxyl, lower alkoxy, vinyloxy, allyloxy, ω-hydroxy-lower alkyl, ω-hydroxy-lower alkoxy, nitro, cyano, amidino, trifluoromethyl, lower alkyl-sulfonyl. In the case where the substituent on the aryl unit is another aryl unit, this second aryl unit may again be mono-, di- or tri-substituted with the substituents given as examples above.


[0053] It is understood that the substituents outlined relative to the expressions cycloalkyl, heterocyclyl, heteroaryl and aryl have been omitted in the definitions of the general formulae I to VI and in claims 1 to 6 for clarity reasons but the definitions in formulae I to VI and in claims 1 to 6 should be read as if they are included therein.


[0054] The expression pharmaceutically acceptable salts encompasses either salts with inorganic acids or organic acids like hydrochloric or hydrobromic acid; sulfuric acid, phosphoric acid, nitric acid, citric acid, formic acid, acetic acid, maleic acid, tartaric acid, methylsulfonic acid, p-toluolsulfonic acid and the like or in case the compound of formula I is acidic in nature with an inorganic base like an alkali or earth alkali base, e.g. sodium hydroxide, potassium hydroxide, calcium hydroxide.


[0055] The compounds of the general formula I can contain one or more asymmetric carbon atoms and may be prepared in form of optically pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates and mixtures of diastereomeric racemates.


[0056] The present invention encompasses all these forms. Mixtures may be separated in a manner known per se, i.e. by column chromatography, thin layer chromatography, HPLC or crystallization.


[0057] The compounds of the general formula I and their pharmaceutically acceptable salts may be used as therapeutics e.g. in form of pharmaceutical compositions. They may especially be used to in prevention or treatment of malaria. These compositions may be administered in enteral or oral form e.g. as tablets, dragees, gelatine capsules, emulsions, solutions or suspensions, in nasal form like sprays or rectally in form of suppositories. These compounds may also be administered in intramuscular, parenteral or intraveneous form, e.g. in form of injectable solutions.


[0058] These pharmaceutical compositions may contain the compounds of formula I as well as their pharmaceutically acceptable salts in combination with inorganic and/or organic excipients which are usual in the pharmaceutical industry like lactose, maize or derivatives thereof, talcum, stearinic acid or salts of these materials.


[0059] For gelatine capsules vegetable oils, waxes, fats, liquid or half-liquid polyols may be used. For the preparation of solutions and sirups e.g. water, polyols saccharose, glucose and related materials are used. Injectables are prepared by using e.g. water, polyols, alcohols, glycerin, vegetable oils, lecithin, liposomes and the like. Suppositories are prepared by using natural or hydrogenated oils, waxes, fatty acids (fats), liquid or half-liquid polyols.


[0060] The compositions may contain in addition preservatives, stability improving substances, viscosity improving or regulating substances, solubility improving substances, sweeteners, dyes, taste improving compounds, salts to change the osmotic pressure, buffer, anti-oxidants and related materials.


[0061] The compounds of formula I may also be used in combination with one or more other therapeutically useful substances e. g. with other antimalarials like quinolines (quinine, chloroquine, amodiaquine, mefloquine, primaquine, tafenoquine), peroxide antimalarials (artemisinin derivatives), pyrimethamine-sulfadoxine antimalarials (e.g. Fansidar), hydroxynaphtoquinones (e.g. atovaquone), acroline-type antimalarials (e. g. pyronaridine) and the like.


[0062] The dosage may vary within wide limits but should be adapted to the specific situation. In general the dosage given in oral form should daily be between about 3 mg and about 3 g, peferably between about 10 mg and about 1 g, especially preferred between 5 mg and 300 mg, per adult with a body weight of about 70 kg. The dosage should be administered preferably in 1 to 3 doses per day which are of equal weight. As usual, children should receive lower doses which are adapted to body weight and age.


[0063] Preferred compounds are compounds of the formula II
2


[0064] wherein


[0065] Q, t, R3 and R4 are as defined in general formula I above, R1 and R2 represent lower alkyl and n represents the whole numbers 2 or 3


[0066] and pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates, mixtures of diastereomeric racemates and pharmaceutically acceptable salts thereof.


[0067] Also preferred compounds are compounds of formula III
3


[0068] wherein


[0069] Q, t, R3 and R4 are as defined in general formula I above and n represents the whole numbers 2 or 3


[0070] and pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates, mixtures of diastereomeric racemates and pharmaceutically acceptable salts thereof.


[0071] Especially preferred are also compounds of the formula IV
4


[0072] wherein


[0073] Q and R3 are as defined in general formula I above


[0074] and pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates, mixtures of diastereomeric racemates and pharmaceutically acceptable salts thereof.


[0075] Especially preferred are also compounds of the formula V
5


[0076] wherein R3 and R5 are as defined in general formula I above


[0077] and pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates, mixtures of diastereomeric racemates and pharmaceutically acceptable salts thereof.


[0078] Especially preferred are compounds of the formula VI
6


[0079] wherein R3 and R5 are as defined in general formula I above


[0080] and pure enantiomers, mixtures of enantiomers, pure diastereomers, mixtures of diastereomers, diastereomeric racemates, mixtures of diastereomeric racemates and pharmaceutically acceptable salts thereof.


[0081] Preferred compounds are:


[0082] N-(4-Benzyloxybenzyl)-N-(2-dibutylamino-ethyl)-4-pentylbenzamide;


[0083] N-Biphenyl-4-ylmethyl-N-(2-dibutylamino-ethyl)-4-pentylbenzamide;


[0084] N-(2-Dibutylaminoethyl)-N-[4′-(2-hydroxy-ethoxy)-biphenyl-4-ylmethyl]-4-pentylbenzamide;


[0085] N-(4-Benzo[1,3]dioxol-5-yl-benzyl)-N-(2-dibutyl-aminoethyl)-4-pentylbenzamide.


[0086] The compounds of the general formula I of the present invention may be prepared according to the general sequences of reactions outlined below, wherein R3, R4, R5, R6, R7, Q, A, t, n and p are as defined in general formula I above (for simplicity and clarity reasons, only parts of the synthetic possibilities which lead to compounds of formulae I to VI are described). For general methods of certain steps see also pages 16-18 and 20-21.
7



Typical Procedure for the First Reductive Amination (Synthesis of Compound 2)

[0087] The amine (1) and the aldehyde {R3—CHO} (1.5 eq.) are mixed in anhydrous methanol and stirred for 6 h. The mixture is treated with sodium borohydride (1.5 eq.) and stirred for 2 h. Purified Amberlyst 15 or another suitable scavenger is added and the suspension is shaken for 12 h. The resin is separated by filtration and washed with methanol. The secondary amine 2 is removed from the resin by adding a 2M methanolic ammonia solution. After 30 min of shaking, the resin is filtered and washed with methanol. The filtrate is evaporated to yield the pure secondary amine 2.


[0088] If not comercially available, aryl- or heteroaryl substituted benzaldehydes can be prepared as follows:


[0089] The aldehyde {R3—CHO} may be obtained from commercially available formylbenzeneboronic acids and substituted bromo aryls or bromo heteroaryls via a Suzuki coupling as described in the literature or as described in the typical procedure D) below.



Typical Procedure for the Acylation (Synthesis of Compound 3)

[0090] To a solution of the amine 2 in anhydrous ethyl acetate is added vacuum dried Amberlyst 21 or another suitable scavenger, followed by the addition of the carboxylic acid chloride {R5—(CO)—Cl} (1.5 eq.). After shaking the suspension for 2 hours, an aliquot water is added in order to hydrolyze the excess of carboxylic acid chloride and shaking is continued for 1 h. The resin is then removed by filtration, washed with ethyl acetate and the solution is evaporated to yield the pure amide 3.


[0091] The carboxylic acid chlorides {R5—(CO)—Cl} may be obtained in situ from the corresponding carboxylic acid as described in the literature (i. e.: Devos, A.; Rémion, J.; Frisque-Hesbain, A. -M.; Colens, A.; Ghosez, L., J. Chem. Soc., Chem. Commun. 1979, 1180).


[0092] The synthesis of the sulfonamide derivatives 5 from the amine 2 is performed in analogy to the above-described procedure.


[0093] The urea derivatives 6 are obtained by reaction of the amines 2 in dichloromethane with one equivalent of an isocyanate.



Typical Procedure for the Second Reductive Amination (Synthesis of Compound 4)

[0094] The amine (1) and the ketone or aldehyde {R5R6CO} (1.5 eq.) are mixed in anhydrous dichloromethane and sodium triacetoxyborohydride (1.3 eq.) is added. After stirring the solution for 48 h, methanol is added and the reaction mixture is treated in the same manner as described for the amines 2.


[0095] Compounds of formula II, where R1 and R2 represent lower alkyl and n represents the whole number 2 or 3 are synthesized as described in scheme 1.


[0096] All chemical transformations can be performed according to well known standard methodologies as described in the literature or as described in the typical procedures above.


[0097] The following examples illustrate the invention but do not limit the scope thereof. All temperatures are stated in ° C.



List of abbreviations:

[0098]

3


















Boc or boc
tert.-butyloxycarbonyl



Cbz
benzyloxycarbonyl



DBU
1,8-diazabicyclo[5.4.0]undec-7-ene(1,5—5)



DCM
dichloromethane



DMF
dimethylformamide



DMSO
dimethylsulfoxide



EtOAc
ethyl acetate



TEA
triethylamine



TFA
trifluoroacetic acid



THF
tetrahydrofuran



TLC
thin layer chromatography












General Procedures and Examples

[0099] The following compounds are prepared according to the procedures described for the synthesis of compounds encompassed by the general formulae hereinbefore. All compounds are caracterized by 1H-NMR (300 MHz) and occasionnally by 13C-NMR (75 MHz) (Varian Oxford, 300 MHz; chemical shifts are given in ppm relative to the solvent used; multiplicities: s=singlet, d=doublet, t=triplet, m=multiplet), by LC-MS (Waters Micromass; ZMD-platform with ESI-probe with Alliance 2790 HT; column: 2×30 mm, Gromsil ODS4, 3 μM 120A; gradient: 0-100% acetonitrile in water, 6 min, with 0.05% formic acid, flow: 0.45 ml/min; tr is given in minutes), by TLC (TLC-plates from Merck, silica gel 60 F254) and occasionally by melting point.



a) General Procedures


Typical Procedure A) for the First Reductive Amination

[0100] The amine and the aldehyde (1.5 eq.) (which are used as starting materials, are known compounds or the synthesis (in case of the aldehydes) is described below in section c) in Referential Examples 1 to 6) are mixed in anhydrous methanol and stirred for 6 h. The mixture is then treated with sodium borohydride (1.5 eq.) and stirred for 2 h. Purified Amberlyst 15 or another suitable scavenger is added and the suspension is shaken for 12 h. The resin is then separated by filtration and washed with methanol. The secondary amine is removed from the resin by adding a 2M methanolic ammonia solution. After 30 min of shaking, the resin is filtered off and washed with methanol. The filtrate is evaporated to yield the pure secondary amine.



Typical Procedure B) for the Acylation

[0101] To a solution of the amine in anhydrous ethyl acetate is added vacuum dried Amberlyst 21 or another suitable scavenger, followed by the addition of the carboxylic acid chloride (1.5 eq.) (which either are commercially available or prepared in situ from the corresponding carboxylic acids according to the literature). After shaking the suspension for 2 h, an aliquot of water is added in order to hydrolyze the excess of carboxylic acid chloride and shaking is continued for 1 h. The resin is then removed by filtration, washed with ethyl acetate and the solution is evaporated to yield the pure amide.



Typical Procedure C) for the Second Reductive Amination

[0102] The amine and the aldehyde or the ketone (1.5 eq.) are mixed in anhydrous dichloromethane and sodium triacetoxyborohydride (1.3 eq.) is added. After stirring of the solution for 48 h, methanol is added and the reaction mixture is treated in the same manner as described in procedure A).



Typical Procedure D) for the Suzuki Coupling

[0103] To a solution of the bromide in toluene, the boronic acid (1.1 eq.) dissolved in isopropanol is added followed by a 2M aqueous solution of potassium carbonate (5 eq.). The mixture is purged with nitrogen for 10 min and tetrakis(triphenylphosphine) palladium (0.03 eq.) is added. After heating under reflux for 6 h, water is added to the cooled reaction mixture and the product is extracted with ethyl acetate. The organic phase is washed with brine and dried over sodium sulfate. The solvent is evaporated to give the crude aldehyde, which is purified by flash chromatography (ethyl acetate/heptane gradient).







b) EXAMPLES


Example 1

[0104] According to typical procedure B), the secondary amine a), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
8



Example 2

[0105] According to typical procedure B), the secondary amine a), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
9



Example 3

[0106] According to typical procedure B), the secondary amine b), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
10



Example 4

[0107] According to typical procedure B), the secondary amine c), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
11



Example 5

[0108] According to typical procedure B), the secondary amine d), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
12



Example 6

[0109] According to typical procedure B), the secondary amine e), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
13



Example 7

[0110] According to typical procedure B), the secondary amine f), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
14



Example 8

[0111] According to typical procedure B), the secondary amine g), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
15



Example 9

[0112] According to typical procedure B), the secondary amine h), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
16



Example 10

[0113] According to typical procedure B), the secondary amine a), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
17



Example 11

[0114] According to typical procedure B), the secondary amine b), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
18



Example 12

[0115] According to typical procedure B), the secondary amine c), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
19



Example 13

[0116] According to typical procedure B), the secondary amine d), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
20



Example 14

[0117] According to typical procedure B), the secondary amine e), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
21



Example 15

[0118] According to typical procedure B), the secondary amine f), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
22



Example 16

[0119] According to typical procedure B), the secondary amine g), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
23



Example 17

[0120] According to typical procedure B), the secondary amine g), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
24



Example 18

[0121] According to typical procedure B), the secondary amine a), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
25



Example 19

[0122] According to typical procedure B), the secondary amine e), obtained via typical procedure A), is reacted with4-n-butylphenylisocyanate to give
26



Example 20

[0123] According to typical procedure C), the secondary amine a), obtained via typical procedure A), is reacted with 4-n-pentylbenzaldehyde to give
27



Example 21

[0124] According to typical procedure B), the secondary amine b), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
28



Example 22

[0125] According to typical procedure B), the secondary amine c), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
29



Example 23

[0126] According to typical procedure B), the secondary amine d), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
30



Example 24

[0127] According to typical procedure B), the secondary amine e), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
31



Example 25

[0128] According to typical procedure B), the secondary amine f), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
32



Example 26

[0129] According to typical procedure B), the secondary amine g), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
33



Example 27

[0130] According to typical procedure B), the secondary amine h), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
34



Example 28

[0131] According to typical procedure B); the secondary amine a), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
35



Example 29

[0132] According to typical procedure B), the secondary amine b), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
36



Example 30

[0133] According to typical procedure B), the secondary amine c), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
37



Example 31

[0134] According to typical procedure B), the secondary amine d), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
38



Example 32

[0135] According to typical procedure B), the secondary amine e), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
39



Example 33

[0136] According to typical procedure B), the secondary amine f), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
40



Example 34

[0137] According to typical procedure B), the secondary amine g), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
41



Example 35

[0138] According to typical procedure B), the secondary amine h), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
42



Example 36

[0139] According to typical procedure B), the secondary amine i), obtained via typical procedure A), is reacted with 4-n-propylbenzoyl chloride to give
43



Example 37

[0140] According to typical procedure B), the secondary amine i), obtained via typical procedure A), is reacted with 4-n-butylbenzoyl chloride to give
44



Example 38

[0141] According to typical procedure B), the secondary amine i), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
45



Example 39

[0142] According to typical procedure B), the secondary amine D), obtained via typical procedure A), is reacted with 4-n-butoxybenzoyl chloride to give
46



Example 40

[0143] According to typical procedure B), the secondary amine b), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
47



Example 41

[0144] According to typical procedure B), the secondary amine c), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
48



Example 42

[0145] According to typical procedure B), the secondary amine d), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
49



Example 43

[0146] According to typical procedure B), the secondary amine i), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
50



Example 44

[0147] According to typical procedure B), the secondary amine f), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
51



Example 45

[0148] According to typical procedure B), the secondary amine g), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
52



Example 46

[0149] According to typical procedure B), the secondary amine h), obtained via typical procedure A), is reacted with 4-n-butylphenylisocyanate to give
53



Example 47

[0150] According to typical procedure B), the secondary amine k), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
54



Example 48

[0151] According to typical procedure B), the secondary amine I), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
55



Example 49

[0152] According to typical procedure B), the secondary amine m), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
56



Example 50

[0153] According to typical procedure B), the secondary amine n), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
57



Example 51

[0154] According to typical procedure B), the secondary amine o), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
58



Example 52

[0155] According to typical procedure B), the secondary amine p), obtained via typical procedure A), is reacted with 4n-pentylbenzoyl chloride to give
59



Example 53

[0156] According to typical procedure B), the secondary amine q), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
60



Example 54

[0157] According to typical procedure B), the secondary amine q1), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
61



Example 55

[0158] According to typical procedure B), the secondary amine q2), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
62



Example 56

[0159] According to typical procedure B), the secondary amine q3), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
63



Example 57

[0160] According to typical procedure B), the secondary amine q4), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
64



Example 58

[0161] According to typical procedure B), the secondary amine q5), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
65



Example 59

[0162] According to typical procedure B), the secondary amine q6), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
66



Example 60

[0163] According to typical procedure B), the secondary amine q7), obtained via typical
67



Example 61

[0164] According to typical procedure B), the secondary amine q8), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
68



Example 62

[0165] According to typical procedure B), the secondary amine q9), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
69



Example 63

[0166] According to typical procedure B), the secondary amine q10), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
70



Example 64

[0167] According to typical procedure C), the secondary amine q2), obtained via typical procedure A), is reacted with 4-n-pentylbenzaldehyde to give
71



Example 65

[0168] According to typical procedure C), the secondary amine q), obtained via typical procedure A), is reacted with 4-n-pentylbenzaldehyde to give
72



Example 66

[0169] According to typical procedure C), the secondary amine q8), obtained via typical procedure A), is reacted with 4-n-pentylbenzaldehyde to give
73



Example 67

[0170] According to typical procedure C), the secondary amine q10), obtained via typical procedure A), is reacted with 4-n-pentylbenzaldehyde to give
74



Example 68

[0171] According to typical procedure C), the secondary amine q9), obtained via typical procedure A), is reacted with 4-n-pentylbenzaldehyde to give
75



Example 69

[0172] According to typical procedure B), the secondary amine r), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
76



Example 70

[0173] According to typical procedure B), the secondary amine s), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
77



Example 71

[0174] According to typical procedure B), the secondary amine t), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
78



Example 72

[0175] According to typical procedure B), the secondary amine u), obtained via typical procedure A), is reacted with 4-n-pentylbenzoyl chloride to give
79



Example 73

[0176] According to typical procedure C), the secondary amine a), obtained via typical procedure A), is reacted with pyridine-2-carbaldehyde to give
80



c) Referential Examples


Referential Example 1

[0177] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 2-(4-bromophenoxy)ethanol to give
81



Referential Example 2

[0178] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 1-bromo-2-fluorobenzene to give
82



Referential Example 3

[0179] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 3-bromobenzotrifluoride to give
83



Referential Example 4

[0180] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 1-bromo-2-chlorobenzene to give
84



Referential Example 5

[0181] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 5-bromopyrimidine to give
85



Referential Example 6

[0182] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 1-bromo-3-(trifluoromethoxy)benzene to give
86



Referential Example 7

[0183] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 5-bromobenzo[1,3]dioxole to give
87



Referential Example 8

[0184] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 4-bromobenzonitrile to give
88



Referential Example 9

[0185] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 3-bromotoluene to give
89



Referential Example 10

[0186] According to typical procedure D), 4-formylbenzeneboronic acid is coupled with 4-bromophenyl acetic acid methyl ester to give
90


Claims
  • 1. Compounds of the general formula I
  • 2. Compounds of formula II
  • 3. Compounds of formula III
  • 4. Compounds of formula IV
  • 5. Compounds of formula V
  • 6. Compounds of formula VI
  • 7. The compounds according to any one of claims 1-6N-(4-Benzyloxybenzyl)-N-(2-dibutylamino-ethyl)-4-pentylbenzamide; N-Biphenyl-4-ylmethyl-N-(2-dibutylamino-ethyl)-4-pentylbenzamide; N-(2-Dibutylaminoethyl)-N-[4′-(2-hydroxy-ethoxy)-biphenyl-4-ylmethyl]-4-pentylbenzamide; N-(4-Benzo[1,3]dioxol-5-yl-benzyl)-N-(2-dibutyl-aminoethyl)-4-pentylbenzamide.
  • 8. Pharmaceutical compositions containing one or more compounds as claimed in any one of claims 1 to 7 and inert excipients.
  • 9. Pharmaceutical compositions according to claim 8 for treatment of diseases demanding the inhibition of aspartic proteases.
  • 10. Pharmaceutical compositions according to claim 8 for treatment of disorders associated with the role of plasmepsin II and which require selective inhibition of plasmepsin II.
  • 11. Pharmaceutical compositions according to claim 8 for treatment or prevention of malaria.
  • 12. Pharmaceutical compositions according to claim 8, which contain aside of one or more compounds of the general formula I a known inhibitor of plasmepsin II, HIV protease or cathepsin D or E.
  • 13. A process for the preparation of a pharmaceutical composition according to any one of claims 9 to 12, characterized by mixing one or more active ingredients according to any one of claims 1 to 7 with inert excipients in a manner known per se.
  • 14. Use of at least one of the compounds of the general formula I for the treatment or prevention of diseases.
  • 15. The novel compounds, processes and methods as well as the use of such compounds substantially as described herein before.
PCT Information
Filing Document Filing Date Country Kind
PCT/EP01/12617 10/31/2001 WO