Sucrose phosphate synthase

Information

  • Patent Grant
  • 6756218
  • Patent Number
    6,756,218
  • Date Filed
    Tuesday, July 31, 2001
    23 years ago
  • Date Issued
    Tuesday, June 29, 2004
    20 years ago
Abstract
This invention relates to an isolated nucleic acid fragment encoding a sucrose phosphate synthase. The invention also relates to the construction of a chimeric gene encoding all or a portion of the sucrose phosphate synthase, in sense or antisense orientation, wherein expression of the chimeric gene results in production of altered levels of the sucrose phosphate synthase in a transformed host cell.
Description




FIELD OF THE INVENTION




This invention is in the field of plant molecular biology. More specifically, this invention pertains to nucleic acid fragments encoding sucrose phosphate synthase in plants and seeds.




BACKGROUND OF THE INVENTION




In plants photosynthetically fixed carbon is ultimately converted into two main carbohydrate products, sucrose and starch. Sucrose is the form in which most fixed carbon is exported from the photosynthetic cell. Sucrose is then translocated to various parts of the plant which have a need for this sugar such as regions of active growth and developing seeds or tubers. Sucrose is synthesized in the cytoplasm of photosynthetic cells from the precursor dihydroxyacetone phosphate (DiHOAcP). In the last two steps of sucrose biosynthesis UDP-glucose is converted to sucrose by the successive action of sucrose phosphate synthase (SPS) (E.C. 2.4.1.14) and sucrose phosphatase. By modulating the level of SPS in plants it may be possible to control carbon partitioning in photosynthetic cells. Accordingly, the availability of nucleic acid sequences encoding all or a portion of a sucrose phosphate synthase protein would facilitate studies to better understand carbon partitioning in plants.




Worrell, A. C. et al. ((1991)


Plant Cell


3:1121-1130) describe a maize cDNA that encodes a sucrose phosphate synthase as confirmed by the ability of the cloned sequence to direct sucrose phosphate synthesis in


E. coli.


Additional nucleic acid fragments encoding sucrose phosphate synthase have been isolated by other groups (e.g., U.S. Pat. No. 5,665,892; JP 2000262283).




SUMMARY OF THE INVENTION




The present invention concerns an isolated polynucleotide comprising: (a) a first nucleotide sequence encoding a first polypeptide comprising at least 400 amino acids, wherein the amino acid sequence of the first polypeptide and the amino acid sequence of SEQ ID NO:24 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, (b) a second nucleotide sequence encoding a second polypeptide comprising at least 435 amino acids, wherein the amino acid sequence of the second polypeptide and the amino acid sequence of SEQ ID NO:28 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, (c) a third nucleotide sequence encoding a third polypeptide comprising at least 150 amino acids, wherein the amino acid sequence of the third polypeptide and the amino acid sequence of SEQ ID NO:26 have at least 90% or 95% identity based on the Clustal alignment method, or (d) the complement of the first, second, or third nucleotide sequence, wherein the complement and the first, second, or third nucleotide sequence contain the same number of nucleotides and are 100% complementary. The first polypeptide preferably comprises the amino acid sequence of SEQ ID NO:24, the second polypeptide preferably comprises the amino acid sequence of SEQ ID NO:28, and the third polypeptide preferably comprises the amino acid sequence of SEQ ID NO:26. The first nucleotide sequence preferably comprises the nucleotide sequence of SEQ ID NO:23, the second nucleotide sequence preferably comprises the nucleotide sequence of SEQ ID NO:27, and the third nucleotide sequence preferably comprises the nucleotide sequence of SEQ ID NO:25. The first, second, and third polypeptides preferably are sucrose phosphate synthases.




In a second embodiment, the present invention relates to a chimeric gene comprising any of the isolated polynucleotides of the present invention operably linked to a regulatory sequence, and a cell, a plant, and a seed comprising the chimeric gene.




In a third embodiment, the present invention relates to a vector comprising any of the isolated polynucleotides of the present invention.




In a fourth embodiment, the present invention relates to an isolated polynucleotide fragment comprising a nucleotide sequence comprised by any of the polynucleotides of the present invention, wherein the nucleotide sequence contains at least 30, 40, or 60 nucleotides.




In a fifth embodiment, the present invention relates to a method for transforming a cell comprising transforming a cell with any of the isolated polynucleotides of the present invention, and the cell transformed by this method. Advantageously, the cell is eukaryotic, e.g., a yeast or plant cell, or prokaryotic, e.g., a bacterium.




In a sixth embodiment, the present invention relates to a method for producing a transgenic plant comprising transforming a plant cell with any of the isolated polynucleotides of the present invention and regenerating a plant from the transformed plant cell, the transgenic plant produced by this method, and the seed obtained from this transgenic plant.




In a seventh embodiment, the present invention concerns an isolated polypeptide comprising: (a) a first amino acid sequence comprising at least 400 amino acids, wherein the first amino acid sequence and the amino acid sequence of SEQ ID NO:24 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, (b) a second amino acid sequence comprising at least 435 amino acids, wherein the second amino acid sequence and the amino acid sequence of SEQ ID NO:28 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, or (c) a third amino acid sequence comprising at least 150 amino acids, wherein the third amino acid sequence and the amino acid sequence of SEQ ID NO:26 have at least 90% or 95% identity based on the Clustal alignment method. The first amino acid sequence preferably comprises the amino acid sequence of SEQ ID NO:24, the second amino acid sequence preferably comprises the amino acid sequence of SEQ ID NO:28, and the third amino acid sequence preferably comprises the amino acid sequence of SEQ ID NO:26. The polypeptide preferably is a sucrose phosphate synthase.




In an eighth embodiment, the present invention relates to a virus, preferably a baculovirus, comprising any of the isolated polynucleotides of the present invention or any of the chimeric genes of the present invention.




In a ninth embodiment, the invention relates to a method of selecting an isolated polynucleotide that affects the level of expression of a sucrose phosphate synthase protein or enzyme activity in a host cell, preferably a plant cell, the method comprising the steps of: (a) constructing an isolated polynucleotide of the present invention or an isolated chimeric gene of the present invention; (b) introducing the isolated polynucleotide or the isolated chimeric gene into a host cell; (c) measuring the level of the sucrose phosphate synthase protein or enzyme activity in the host cell containing the isolated polynucleotide; and (d) comparing the level of the sucrose phosphate synthase protein or enzyme activity in the host cell containing the isolated polynucleotide with the level of the sucrose phosphate synthase protein or enzyme activity in the host cell that does not contain the isolated polynucleotide.




In a tenth embodiment, the invention concerns a method of obtaining a nucleic acid fragment encoding a substantial portion of a sucrose phosphate synthase protein, preferably a plant sucrose phosphate synthase protein, comprising the steps of: synthesizing an oligonucleotide primer comprising a nucleotide sequence of at least one of 60 (preferably at least one of 40, most preferably at least one of 30) contiguous nucleotides derived from a nucleotide sequence selected from the group consisting of SEQ ID NO:23, 25, and 27, and the complement of such nucleotide sequences; and amplifying a nucleic acid fragment (preferably a cDNA inserted in a cloning vector) using the oligonucleotide primer. The amplified nucleic acid fragment preferably will encode a substantial portion of a sucrose phosphate synthase protein amino acid sequence.




In an eleventh embodiment, this invention relates to a method of obtaining a nucleic acid fragment encoding all or a substantial portion of the amino acid sequence encoding a sucrose phosphate synthase protein comprising the steps of: probing a cDNA or genomic library with an isolated polynucleotide of the present invention; identifying a DNA clone that hybridizes with an isolated polynucleotide of the present invention; isolating the identified DNA clone; and sequencing the cDNA or genomic fragment that comprises the isolated DNA clone.




In a twelfth embodiment, this invention concerns a method for positive selection of a transformed cell comprising: (a) transforming a host cell with the chimeric gene of the present invention or an expression cassette of the present invention; and (b) growing the transformed host cell, preferably a plant cell, such as a monocot or a dicot, under conditions which allow expression of the sucrose phosphate synthase polynucleotide in an amount sufficient to complement a null mutant to provide a positive selection means.




In a thirteenth embodiment, this invention relates to a method of altering the level of expression of a sucrose phosphate synthase protein in a host cell comprising: (a) transforming a host cell with a chimeric gene of the present invention; and (b) growing the transformed host cell under conditions that are suitable for expression of the chimeric gene wherein expression of the chimeric gene results in production of altered levels of the sucrose phosphate synthase protein in the transformed host cell.











BRIEF DESCRIPTION OF THE DRAWING AND SEQUENCE LISTINGS




The invention can be more fully understood from the following detailed description and the accompanying drawing and Sequence Listing which form a part of this application.





FIGS. 1A

,


1


B,


1


C, and


1


D depict the amino acid sequence alignment between the sucrose phosphate synthases encoded by the following: (a) nucleotide sequence of the insert in corn clone ceb5.pk0081.h10 (SEQ ID NO:24), and (b) nucleotide sequence from


Citrus unshiu


(NCBI GI No. 3915023; SEQ ID NO:29). Amino acids which are conserved between the two sequences are indicated with an asterisk (*). Dashes are used by the program to maximize alignment of the sequences.




Table 1 lists the polypeptides that are described herein, the designation of the cDNA clones that comprise the nucleic acid fragments encoding polypeptides representing all or a substantial portion of these polypeptides, and the corresponding identifier (SEQ ID NO:) as used in the attached Sequence Listing. Table 1 also identifies the cDNA clones as individual ESTs (“EST”), the sequences of the entire cDNA inserts comprising the indicated cDNA clones (“FIS”), contigs assembled from two or more ESTs (“Contig”), contigs assembled from an FIS and one or more ESTs or PCR fragment sequence (“Contig*”), or sequences encoding the entire protein derived from an EST, an FIS, a contig, or an FIS and PCR fragment sequence (“CGS”). SEQ ID NOs:1-22 correspond to SEQ ID NOs:1-22, respectively, presented in U.S. patent application Ser. No. 09/697,367 filed on Oct. 26, 2000 and in WO 99/57285 which published Nov. 11, 1999. The sequence descriptions and Sequence Listing attached hereto comply with the rules governing nucleotide and/or amino acid sequence disclosures in patent applications as set forth in 37 C.F.R. §1.821-1.825.












TABLE 1











Sucrose Phosphate Synthase













SEQ ID NO:



















(Amino






Plant




Clone Designation




Status




(Nucleotide)




Acid)









Catalpa




ncs.pk0009.e3




FIS




 1




 2






Barley




bsh1.pk0013.d3




FIS




 3




 4






Corn




ceb5.pk0081.g10




EST




 5




 6






Corn




Contig of




Contig




 7




 8







p0130.cwtaf69r







p0093.cssan39r







p0094.cssst68r







p0119.cmtoh35r







p0127.cntag51r






Rice




Contig of




Contig




 9




10







rls12.pk0024.d8







rl0n.pk0002.e3






Rice




rl0n.pk086.i23




EST




11




12






Rice




rl0n.pk0056.d5




EST




13




14






Soybean




sfl1.pk0048.a12(FIS)




CGS




15




16






Soybean




sfl1.pk0075.d7




EST




17




18






Wheat




Contig of




Contig




19




20







wr1.pk0028.h11(FIS)







wr1.pk0112.a8






Wheat




Contig of




Contig




21




22







wkm1c.pk0002.g6







wr1.pk0046.c10






Corn




ceb5.pk0081.h10(FIS)




CGS




23




24






Rice




rls12.pk0024.d8




FIS




25




26






Wheat




wkm1c.pk0002.g6




FIS




27




28














The Sequence Listing contains the one letter code for nucleotide sequence characters and the three letter codes for amino acids as defined in conformity with the IUPAC-IUBMB standards described in


Nucleic Acids Res.


13:3021-3030 (1985) and in the


Biochemical J.


219 (No. 2):345-373 (1984) which are herein incorporated by reference. The symbols and format used for nucleotide and amino acid sequence data comply with the rules set forth in 37 C.F.R. §1.822.











DETAILED DESCRIPTION OF THE INVENTION




In the context of this disclosure, a number of terms shall be utilized. The terms “polynucleotide”, “polynucleotide sequence”, “nucleic acid sequence”, and “nucleic acid fragment”/“isolated nucleic acid fragment” are used interchangeably herein. These terms encompass nucleotide sequences and the like. A polynucleotide may be a polymer of RNA or DNA that is single- or double-stranded, that optionally contains synthetic, non-natural or altered nucleotide bases. A polynucleotide in the form of a polymer of DNA may be comprised of one or more segments of cDNA, genomic DNA, synthetic DNA, or mixtures thereof. An isolated polynucleotide of the present invention may include at least 60 contiguous nucleotides, preferably at least 40 contiguous nucleotides, most preferably at least 30 contiguous nucleotides derived from SEQ ID NO:23, 25, or 27, or the complement of such sequences.




The term “isolated” polynucleotide refers to a polynucleotide that is substantially free from other nucleic acid sequences, such as and not limited to other chromosomal and extrachromosomal DNA and RNA. Isolated polynucleotides may be purified from a host cell in which they naturally occur. Conventional nucleic acid purification methods known to skilled artisans may be used to obtain isolated polynucleotides. The term also embraces recombinant polynucleotides and chemically synthesized polynucleotides.




The term “recombinant” means, for example, that a nucleic acid sequence is made by an artificial combination of two otherwise separated segments of sequence, e.g., by chemical synthesis or by the manipulation of isolated nucleic acids by genetic engineering techniques.




As used herein, “contig” refers to a nucleotide sequence that is assembled from two or more constituent nucleotide sequences that share common or overlapping regions of sequence homology. For example, the nucleotide sequences of two or more nucleic acid fragments can be compared and aligned in order to identify common or overlapping sequences. Where common or overlapping sequences exist between two or more nucleic acid fragments, the sequences (and thus their corresponding nucleic acid fragments) can be assembled into a single contiguous nucleotide sequence.




As used herein, “substantially similar” refers to nucleic acid fragments wherein changes in one or more nucleotide bases results in substitution of one or more amino acids, but do not affect the functional properties of the polypeptide encoded by the nucleotide sequence. “Substantially similar” also refers to nucleic acid fragments wherein changes in one or more nucleotide bases does not affect the ability of the nucleic acid fragment to mediate alteration of gene expression by gene silencing through for example antisense or co-suppression technology. “Substantially similar” also refers to modifications of the nucleic acid fragments of the instant invention such as deletion or insertion of one or more nucleotides that do not substantially affect the functional properties of the resulting transcript vis-à-vis the ability to mediate gene silencing or alteration of the functional properties of the resulting protein molecule. It is therefore understood that the invention encompasses more than the specific exemplary nucleotide or amino acid sequences and includes functional equivalents thereof. The terms “substantially similar” and “corresponding substantially” are used interchangeably herein.




Substantially similar nucleic acid fragments may be selected by screening nucleic acid fragments representing subfragments or modifications of the nucleic acid fragments of the instant invention, wherein one or more nucleotides are substituted, deleted and/or inserted, for their ability to affect the level of the polypeptide encoded by the unmodified nucleic acid fragment in a plant or plant cell. For example, a substantially similar nucleic acid fragment representing at least 30 contiguous nucleotides derived from the instant nucleic acid fragment can be constructed and introduced into a plant or plant cell. The level of the polypeptide encoded by the unmodified nucleic acid fragment present in a plant or plant cell exposed to the substantially similar nucleic fragment can then be compared to the level of the polypeptide in a plant or plant cell that is not exposed to the substantially similar nucleic acid fragment.




For example, it is well known in the art that antisense suppression and co-suppression of gene expression may be accomplished using nucleic acid fragments representing less than the entire coding region of a gene, and by using nucleic acid fragments that do not share 100% sequence identity with the gene to be suppressed. Moreover, alterations in a nucleic acid fragment which result in the production of a chemically equivalent amino acid at a given site, but do not effect the functional properties of the encoded polypeptide, are well known in the art. Thus, a codon for the amino acid alanine, a hydrophobic amino acid, may be substituted by a codon encoding another less hydrophobic residue, such as glycine, or a more hydrophobic residue, such as valine, leucine, or isoleucine. Similarly, changes which result in substitution of one negatively charged residue for another, such as aspartic acid for glutamic acid, or one positively charged residue for another, such as lysine for arginine, can also be expected to produce a functionally equivalent product. Nucleotide changes which result in alteration of the N-terminal and C-terminal portions of the polypeptide molecule would also not be expected to alter the activity of the polypeptide. Each of the proposed modifications is well within the routine skill in the art, as is determination of retention of biological activity of the encoded products. Consequently, an isolated polynucleotide comprising a nucleotide sequence of at least 60 (preferably at least 40, most preferably at least 30) contiguous nucleotides derived from a nucleotide sequence selected from the group consisting of SEQ ID NO:23, 25, and 27, and the complement of such nucleotide sequences may be used in methods of selecting an isolated polynucleotide that affects the expression of a sucrose phosphate synthase polypeptide in a host cell. A method of selecting an isolated polynucleotide that affects the level of expression of a polypeptide in a virus or in a host cell (eukaryotic, such as plant or yeast, prokaryotic such as bacterial) may comprise the steps of: constructing an isolated polynucleotide of the present invention or an isolated chimeric gene of the present invention; introducing the isolated polynucleotide or the isolated chimeric gene into a host cell; measuring the level of a polypeptide or enzyme activity in the host cell containing the isolated polynucleotide; and comparing the level of a polypeptide or enzyme activity in the host cell containing the isolated polynucleotide with the level of a polypeptide or enzyme activity in a host cell that does not contain the isolated polynucleotide.




Moreover, substantially similar nucleic acid fragments may also be characterized by their ability to hybridize. Estimates of such homology are provided by either DNA-DNA or DNA-RNA hybridization under conditions of stringency as is well understood by those skilled in the art (Hames and Higgins, Eds. (1985) Nucleic Acid Hybridisation, IRL Press, Oxford, U.K.). Stringency conditions can be adjusted to screen for moderately similar fragments, such as homologous sequences from distantly related organisms, to highly similar fragments, such as genes that duplicate functional enzymes from closely related organisms. Post-hybridization washes determine stringency conditions. One set of preferred conditions uses a series of washes starting with 6×SSC, 0.5% SDS at room temperature for 15 min, then repeated with 2×SSC, 0.5% SDS at 45° C. for 30 min, and then repeated twice with 0.2×SSC, 0.5% SDS at 50° C. for 30 min. A more preferred set of stringent conditions uses higher temperatures in which the washes are identical to those above except for the temperature of the final two 30 min washes in 0.2×SSC, 0.5% SDS was increased to 60° C. Another preferred set of highly stringent conditions uses two final washes in 0.1×SSC, 0.1% SDS at 65° C.




Substantially similar nucleic acid fragments of the instant invention may also be characterized by the percent identity of the amino acid sequences that they encode to the amino acid sequences disclosed herein, as determined by algorithms commonly employed by those skilled in this art. Suitable nucleic acid fragments (isolated polynucleotides of the present invention) encode polypeptides that are at least about 70% identical, preferably at least about 80% identical to the amino acid sequences reported herein. Preferred nucleic acid fragments encode amino acid sequences that are at least about 85% identical to the amino acid sequences reported herein. More preferred nucleic acid fragments encode amino acid sequences that are at least about 90% identical to the amino acid sequences reported herein. Most preferred are nucleic acid fragments that encode amino acid sequences that are at least about 95% identical to the amino acid sequences reported herein. Suitable nucleic acid fragments not only have the above identities but typically encode a polypeptide having at least 50 amino acids, preferably at least 100 amino acids, more preferably at least 150 amino acids, still more preferably at least 200 amino acids, and most preferably at least 250, 400, or 435 amino acids. Sequence alignments and percent identity calculations were performed using the Megalign program of the LASERGENE bioinformatics computing suite (DNASTAR Inc., Madison, Wis.). Multiple alignment of the sequences was performed using the Clustal method of alignment (Higgins and Sharp (1989)


CABIOS.


5:151-153) with the default parameters (GAP PENALTY=10, GAP LENGTH PENALTY=10). Default parameters for pairwise alignments using the Clustal method were KTUPLE 1, GAP PENALTY=3, WINDOW=5 and DIAGONALS SAVED=5.




A “substantial portion” of an amino acid or nucleotide sequence comprises an amino acid or a nucleotide sequence that is sufficient to afford putative identification of the protein or gene that the amino acid or nucleotide sequence comprises. Amino acid and nucleotide sequences can be evaluated either manually by one skilled in the art, or by using computer-based sequence comparison and identification tools that employ algorithms such as BLAST (Basic Local Alignment Search Tool; Altschul et al. (1993)


J. Mol. Biol.


215:403-410). In general, a sequence of ten or more contiguous amino acids or thirty or more contiguous nucleotides is necessary in order to putatively identify a polypeptide or nucleic acid sequence as homologous to a known protein or gene. Moreover, with respect to nucleotide sequences, gene-specific oligonucleotide probes comprising 30 or more contiguous nucleotides may be used in sequence-dependent methods of gene identification (e.g., Southern hybridization) and isolation (e.g., in situ hybridization of bacterial colonies or bacteriophage plaques). In addition, short oligonucleotides of 12 or more nucleotides may be used as amplification primers in PCR in order to obtain a particular nucleic acid fragment comprising the primers. Accordingly, a “substantial portion” of a nucleotide sequence comprises a nucleotide sequence that will afford specific identification and/or isolation of a nucleic acid fragment comprising the sequence. The instant specification teaches amino acid and nucleotide sequences encoding polypeptides that comprise one or more particular plant proteins. The skilled artisan, having the benefit of the sequences as reported herein, may now use all or a substantial portion of the disclosed sequences for purposes known to those skilled in this art. Accordingly, the instant invention comprises the complete sequences as reported in the accompanying Sequence Listing, as well as substantial portions of those sequences as defined above.




“Codon degeneracy” refers to divergence in the genetic code permitting variation of the nucleotide sequence without effecting the amino acid sequence of an encoded polypeptide. Accordingly, the instant invention relates to any nucleic acid fragment comprising a nucleotide sequence that encodes all or a substantial portion of the amino acid sequences set forth herein. The skilled artisan is well aware of the “codon-bias” exhibited by a specific host cell in usage of nucleotide codons to specify a given amino acid. Therefore, when synthesizing a nucleic acid fragment for improved expression in a host cell, it is desirable to design the nucleic acid fragment such that its frequency of codon usage approaches the frequency of preferred codon usage of the host cell.




“Synthetic nucleic acid fragments” can be assembled from oligonucleotide building blocks that are chemically synthesized using procedures known to those skilled in the art. These building blocks are ligated and annealed to form larger nucleic acid fragments which may then be enzymatically assembled to construct the entire desired nucleic acid fragment. “Chemically synthesized”, as related to a nucleic acid fragment, means that the component nucleotides were assembled in vitro. Manual chemical synthesis of nucleic acid fragments may be accomplished using well established procedures, or automated chemical synthesis can be performed using one of a number of commercially available machines. Accordingly, the nucleic acid fragments can be tailored for optimal gene expression based on optimization of the nucleotide sequence to reflect the codon bias of the host cell. The skilled artisan appreciates the likelihood of successful gene expression if codon usage is biased towards those codons favored by the host. Determination of preferred codons can be based on a survey of genes derived from the host cell where sequence information is available.




“Gene” refers to a nucleic acid fragment that expresses a specific protein, including regulatory sequences preceding (5′ non-coding sequences) and following (3′ non-coding sequences) the coding sequence. “Native gene” refers to a gene as found in nature with its own regulatory sequences. “Chimeric gene” refers any gene that is not a native gene, comprising regulatory and coding sequences that are not found together in nature. Accordingly, a chimeric gene may comprise regulatory sequences and coding sequences that are derived from different sources, or regulatory sequences and coding sequences derived from the same source, but arranged in a manner different than that found in nature. “Endogenous gene” refers to a native gene in its natural location in the genome of an organism. A “foreign-gene” refers to a gene not normally found in the host organism, but that is introduced into the host organism by gene transfer. Foreign genes can comprise native genes inserted into a non-native organism, or chimeric genes. A “transgene” is a gene that has been introduced into the genome by a transformation procedure.




“Coding sequence” refers to a nucleotide sequence that codes for a specific amino acid sequence. “Regulatory sequences” refer to nucleotide sequences located upstream (5′ non-coding sequences), within, or downstream (3′ non-coding sequences) of a coding sequence, and which influence the transcription, RNA processing or stability, or translation of the associated coding sequence. Regulatory sequences may include promoters, translation leader sequences, introns, and polyadenylation recognition sequences.




“Promoter” refers to a nucleotide sequence capable of controlling the expression of a coding sequence or functional RNA. In general, a coding sequence is located 3′ to a promoter sequence. The promoter sequence consists of proximal and more distal upstream elements, the latter elements often referred to as enhancers. Accordingly, an “enhancer” is a nucleotide sequence which can stimulate promoter activity and may be an innate element of the promoter or a heterologous element inserted to enhance the level or tissue-specificity of a promoter. Promoters may be derived in their entirety from a native gene, or may be composed of different elements derived from different promoters found in nature, or may even comprise synthetic nucleotide segments. It is understood by those skilled in the art that different promoters may direct the expression of a gene in different tissues or cell types, or at different stages of development, or in response to different environmental conditions. Promoters which cause a nucleic acid fragment to be expressed in most cell types at most times are commonly referred to as “constitutive promoters”. New promoters of various types useful in plant cells are constantly being discovered; numerous examples may be found in the compilation by Okamuro and Goldberg (1989)


Biochemistry of Plants


15:1-82. It is further recognized that since in most cases the exact boundaries of regulatory sequences have not been completely defined, nucleic acid fragments of different lengths may have identical promoter activity.




“Translation leader sequence” refers to a nucleotide sequence located between the promoter sequence of a gene and the coding sequence. The translation leader sequence is present in the fully processed mRNA upstream of the translation start sequence. The translation leader sequence may affect processing of the primary transcript to mRNA, mRNA stability or translation efficiency. Examples of translation leader sequences have been described (Turner and Foster (1995)


Mol. Biotechnol.


3:225-236).




“3′ non-coding sequences” refer to nucleotide sequences located downstream of a coding sequence and include polyadenylation recognition sequences and other sequences encoding regulatory signals capable of affecting mRNA processing or gene expression. The polyadenylation signal is usually characterized by affecting the addition of polyadenylic acid tracts to the 3′ end of the mRNA precursor. The use of different 3′ non-coding sequences is exemplified by Ingelbrecht et al. (1989)


Plant Cell


1:671-680.




“RNA transcript” refers to the product resulting from RNA polymerase-catalyzed transcription of a DNA sequence. When the RNA transcript is a perfect complementary copy of the DNA sequence, it is referred to as the primary transcript or it may be a RNA sequence derived from posttranscriptional processing of the primary transcript and is referred to as the mature RNA. “Messenger RNA (mRNA)” refers to the RNA that is without introns and that can be translated into polypeptides by the cell. “cDNA” refers to DNA that is complementary to and derived from an mRNA template. The cDNA can be single-stranded or converted to double stranded form using, for example, the Klenow fragment of DNA polymerase I. “Sense-RNA” refers to an RNA transcript that includes the mRNA and so can be translated into a polypeptide by the cell. “Antisense RNA” refers to an RNA transcript that is complementary to all or part of a target primary transcript or mRNA and that blocks the expression of a target gene (see U.S. Pat. No. 5,107,065, incorporated herein by reference). The complementarity of an antisense RNA may be with any part of the specific nucleotide sequence, i.e., at the 5′ non-coding sequence, 3′ non-coding sequence, introns, or the coding sequence. “Functional RNA” refers to sense RNA, antisense RNA, ribozyme RNA, or other RNA that may not be translated but yet has an effect on cellular processes.




The term “operably linked” refers to the association of two or more nucleic acid fragments on a single polynucleotide so that the function of one is affected by the other. For example, a promoter is operably linked with a coding sequence when it is capable of affecting the expression of that coding sequence (i.e., that the coding sequence is under the transcriptional control of the promoter). Coding sequences can be operably linked to regulatory sequences in sense or antisense orientation.




The term “expression”, as used herein, refers to the transcription and stable accumulation of sense (mRNA) or antisense RNA derived from the nucleic acid fragment of the invention. Expression may also refer to translation of mRNA into a polypeptide. “Antisense inhibition” refers to the production of antisense RNA transcripts capable of suppressing the expression of the target protein. “Overexpression” refers to the production of a gene product in transgenic organisms that exceeds levels of production in normal or non-transformed organisms. “Co-suppression” refers to the production of sense RNA transcripts capable of suppressing the expression of identical or substantially similar foreign or endogenous genes (U.S. Pat. No. 5,231,020, incorporated herein by reference).




A “protein” or “polypeptide” is a chain of amino acids arranged in a specific order determined by the coding sequence in a polynucleotide encoding the polypeptide. Each protein or polypeptide has a unique function.




“Altered levels” or “altered expression” refers to the production of gene product(s) in transgenic organisms in amounts or proportions that differ from that of normal or non-transformed organisms.




“Null mutant” refers here to a host cell which either lacks the expression of a certain polypeptide or expresses a polypeptide which is inactive or does not have any detectable expected enzymatic function.




“Mature protein” or the term “mature” when used in describing a protein refers to a post-translationally processed polypeptide; i.e., one from which any pre- or propeptides present in the primary translation product have been removed. “Precursor protein” or the term “precursor” when used in describing a protein refers to the primary product of translation of mRNA; i.e., with pre- and propeptides still present. Pre- and propeptides may be but are not limited to intracellular localization signals.




A “chloroplast transit peptide” is an amino acid sequence which is translated in conjunction with a protein and directs the protein to the chloroplast or other plastid types present in the cell in which the protein is made. “Chloroplast transit sequence” refers to a nucleotide sequence that encodes a chloroplast transit peptide. A “signal peptide” is an amino acid sequence which is translated in conjunction with a protein and directs the protein to the secretory system (Chrispeels (1991)


Ann. Rev. Plant Phys. Plant Mol. Biol.


42:21-53). If the protein is to be directed to a vacuole, a vacuolar targeting signal (supra) can further be added, or if to the endoplasmic reticulum, an endoplasmic reticulum retention signal (supra) may be added. If the protein is to be directed to the nucleus, any signal peptide present should be removed and instead a nuclear localization signal included (Raikhel (1992)


Plant Phys.


100:1627-1632).




“Transformation” refers to the transfer of a nucleic acid fragment into the genome of a host organism, resulting in genetically stable inheritance. Host organisms containing the transformed nucleic acid fragments are referred to as “transgenic” organisms. Examples of methods of plant transformation include Agrobacterium-mediated transformation (De Blaere et al. (1987)


Meth. Enzymol.


143:277) and particle-accelerated or “gene gun” transformation technology (Klein et al. (1987)


Nature


(London) 327:70-73; U.S. Pat. No. 4,945,050, incorporated herein by reference). Thus, isolated polynucleotides of the present invention can be incorporated into recombinant constructs, typically DNA constructs, capable of introduction into and replication in a host cell. Such a construct can be a vector that includes a replication system and sequences that are capable of transcription and translation of a polypeptide-encoding sequence in a given host cell. A number of vectors suitable for stable transfection of plant cells or for the establishment of transgenic plants have been described in, e.g., Pouwels et al., Cloning Vectors: A Laboratory Manual, 1985, supp. 1987; Weissbach and Weissbach, Methods for Plant Molecular Biology, Academic Press, 1989; and Flevin et al., Plant Molecular Biology Manual, Kluwer Academic Publishers, 1990. Typically, plant expression vectors include, for example, one or more cloned plant genes under the transcriptional control of 5′ and 3′ regulatory sequences and a dominant selectable marker. Such plant expression vectors also can contain a promoter regulatory region (e.g., a regulatory region controlling inducible or constitutive, environmentally- or developmentally-regulated, or cell- or tissue-specific expression), a transcription initiation start site, a ribosome binding site, an RNA processing signal, a transcription termination site, and/or a polyadenylation signal.




Standard recombinant DNA and molecular cloning techniques used herein are well known in the art and are described more fully in Sambrook et al.


Molecular Cloning: A Laboratory Manual;


Cold Spring Harbor Laboratory Press: Cold Spring Harbor, 1989 (hereinafter “Maniatis”).




“PCR” or “polymerase chain reaction” is well known by those skilled in the art as a technique used for the amplification of specific DNA segments (U.S. Pat. Nos. 4,683,195 and 4,800,159).




The present invention concerns an isolated polynucleotide comprising: (a) a first nucleotide sequence encoding a first polypeptide comprising at least 400 amino acids, wherein the amino acid sequence of the first polypeptide and the amino acid sequence of SEQ ID NO:24 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, (b) a second nucleotide sequence encoding a second polypeptide comprising at least 435 amino acids, wherein the amino acid sequence of the second polypeptide and the amino acid sequence of SEQ ID NO:28 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, (c) a third nucleotide sequence encoding a third polypeptide comprising at least 150 amino acids, wherein the amino acid sequence of the third polypeptide and the amino acid sequence of SEQ ID NO:26 have at least 90% or 95% identity based on the Clustal alignment method, or (d) the complement of the first, second, or third nucleotide sequence, wherein the complement and the first, second, or third nucleotide sequence contain the same number of nucleotides and are 100% complementary. The first polypeptide preferably comprises the amino acid sequence of SEQ ID NO:24, the second polypeptide preferably comprises the amino acid sequence of SEQ ID NO:28, and the third polypeptide preferably comprises the amino acid sequence of SEQ ID NO:26. The first nucleotide sequence preferably comprises the nucleotide sequence of SEQ ID NO:23, the second nucleotide sequence preferably comprises the nucleotide sequence of SEQ ID NO:27, and the third nucleotide sequence preferably comprises the nucleotide sequence of SEQ ID NO:25. The first, second, and third polypeptides preferably are sucrose phosphate synthases.




Nucleic acid fragments encoding at least a portion of several sucrose phosphate synthases have been isolated and identified by comparison of random plant cDNA sequences to public databases containing nucleotide and protein sequences using the BLAST algorithms well known to those skilled in the art. The nucleic acid fragments of the instant invention may be used to isolate cDNAs and genes encoding homologous proteins from the same or other plant species. Isolation of homologous genes using sequence-dependent protocols is well known in the art. Examples of sequence-dependent protocols include, but are not limited to, methods of nucleic acid hybridization, and methods of DNA and RNA amplification as exemplified by various uses of nucleic acid amplification technologies (e.g., polymerase chain reaction, ligase chain reaction).




For example, genes encoding other sucrose phosphate synthases, either as cDNAs or genomic DNAs, could be isolated directly by using all or a portion of the instant nucleic acid fragments as DNA hybridization probes to screen libraries from any desired plant employing methodology well known to those skilled in the art. Specific oligonucleotide probes based upon the instant nucleic acid sequences can be designed and synthesized by methods known in the art (Maniatis). Moreover, an entire sequence can be used directly to synthesize DNA probes by methods known to the skilled artisan such as random primer DNA labeling, nick translation, end-labeling techniques, or RNA probes using available in vitro transcription systems. In addition, specific primers can be designed and used to amplify a part or all of the instant sequences. The resulting amplification products can be labeled directly during amplification reactions or labeled after amplification reactions, and used as probes to isolate full length cDNA or genomic fragments under conditions of appropriate stringency.




In addition, two short segments of the instant nucleic acid fragments may be used in polymerase chain reaction protocols to amplify longer nucleic acid fragments encoding homologous genes from DNA or RNA. The polymerase chain reaction may also be performed on a library of cloned nucleic acid fragments wherein the sequence of one primer is derived from the instant nucleic acid fragments, and the sequence of the other primer takes advantage of the presence of the polyadenylic acid tracts to the 3′ end of the mRNA precursor encoding plant genes. Alternatively, the second primer sequence may be based upon sequences derived from the cloning vector. For example, the skilled artisan can follow the RACE protocol (Frohman et al. (1988)


Proc. Natl. Acad. Sci. USA


85:8998-9002) to generate cDNAs by using PCR to amplify copies of the region between a single point in the transcript and the 3′ or 5′ end. Primers oriented in the 3′ and 5′ directions can be designed from the instant sequences. Using commercially available 3′ RACE or 5′ RACE systems (BRL), specific 3′ or 5′ cDNA fragments can be isolated (Ohara et al. (1989)


Proc. Natl. Acad. Sci. USA


86:5673-5677; Loh et al. (1989)


Science


243:217-220). Products generated by the 3′ and 5′ RACE procedures can be combined to generate full-length cDNAs (Frohman and Martin (1989)


Techniques


1:165). Consequently, a polynucleotide comprising a nucleotide sequence of at least 60 (preferably at least 40, most preferably at least 30) contiguous nucleotides derived from a nucleotide sequence selected from the group consisting of SEQ ID NO:23, 25, and 27, and the complement of such nucleotide sequences may be used in such methods to obtain a nucleic acid fragment encoding a substantial portion of an amino acid sequence of a polypeptide.




The present invention relates to a method of obtaining a nucleic acid fragment encoding a substantial portion of a sucrose phosphate synthase polypeptide, preferably a substantial portion of a plant sucrose phosphate synthase polypeptide, comprising the steps of: synthesizing an oligonucleotide primer comprising a nucleotide sequence of at least 60 (preferably at least 40, most preferably at least 30) contiguous nucleotides derived from a nucleotide sequence selected from the group consisting of SEQ ID NO:23, 25, and 27, and the complement of such nucleotide sequences; and amplifying a nucleic acid fragment (preferably a cDNA inserted in a cloning vector) using the oligonucleotide primer. The amplified nucleic acid fragment preferably will encode a portion of a sucrose phosphate synthase polypeptide.




Availability of the instant nucleotide and deduced amino acid sequences facilitates immunological screening of cDNA expression libraries. Synthetic peptides representing portions of the instant amino acid sequences may be synthesized. These peptides can be used to immunize animals to produce polyclonal or monoclonal antibodies with specificity for peptides or proteins comprising the amino acid sequences. These antibodies can be then be used to screen cDNA expression libraries to isolate full-length cDNA clones of interest (Lerner (1984)


Adv. Immunol.


36:1-34; Maniatis).




In another embodiment, this invention concerns viruses and host cells comprising either the chimeric genes of the invention as described herein or an isolated polynucleotide of the invention as described herein. Examples of host cells which can be used to practice the invention include, but are not limited to, yeast, bacteria, and plants.




As was noted above, the nucleic acid fragments of the instant invention may be used to create transgenic plants in which the disclosed polypeptides are present at higher or lower levels than normal or in cell types or developmental stages in which they are not normally found. This would have the effect of altering the level of sucrose and sucrose biosynthetic activity in those cells.




Overexpression of the proteins of the instant invention may be accomplished by first constructing a chimeric gene in which the coding region is operably linked to a promoter capable of directing expression of a gene in the desired tissues at the desired stage of development. The chimeric gene may comprise promoter sequences and translation leader sequences derived from the same genes. 3′ Non-coding sequences encoding transcription termination signals may also be provided. The instant chimeric gene may also comprise one or more introns in order to facilitate gene expression.




Plasmid vectors comprising the instant isolated polynucleotide (or chimeric gene) may be constructed. The choice of plasmid vector is dependent upon the method that will be used to transform host plants. The skilled artisan is well aware of the genetic elements that must be present on the plasmid vector in order to successfully transform, select and propagate host cells containing the chimeric gene. The skilled artisan will also recognize that different independent transformation events will result in different levels and patterns of expression (Jones et al. (1985)


EMBO J.


4:2411-2418; De Almeida et al. (1989)


Mol. Gen. Genetics


218:78-86), and thus that multiple events must be screened in order to obtain lines displaying the desired expression level and pattern. Such screening may be accomplished by Southern analysis of DNA, Northern analysis of mRNA expression, Western analysis of protein expression, or phenotypic analysis.




For some applications it may be useful to direct the instant polypeptides to different cellular compartments, or to facilitate its secretion from the cell. It is thus envisioned that the chimeric gene described above may be further supplemented by directing the coding sequence to encode the instant polypeptides with appropriate intracellular targeting sequences such as transit sequences (Keegstra (1989)


Cell


56:247-253), signal sequences or sequences encoding endoplasmic reticulum localization (Chrispeels (1991)


Ann. Rev. Plant Phys. Plant Mol. Biol.


42:21-53), or nuclear localization signals (Raikhel (1992)


Plant Phys.


100:1627-1632) with or without removing targeting sequences that are already present. While the references cited give examples of each of these, the list is not exhaustive and more targeting signals of use may be discovered in the future.




It may also be desirable to reduce or eliminate expression of genes encoding the instant polypeptides in plants for some applications. In order to accomplish this, a chimeric gene designed for co-suppression of the instant polypeptide can be constructed by linking a gene or gene fragment encoding that polypeptide to plant promoter sequences. Alternatively, a chimeric gene designed to express antisense RNA for all or part of the instant nucleic acid fragment can be constructed by linking the gene or gene fragment in reverse orientation to plant promoter sequences. Either the co-suppression or antisense chimeric genes could be introduced into plants via transformation wherein expression of the corresponding endogenous genes are reduced or eliminated.




Molecular genetic solutions to the generation of plants with altered gene expression have a decided advantage over more traditional plant breeding approaches. Changes in plant phenotypes can be produced by specifically inhibiting expression of one or more genes by antisense inhibition or cosuppression (U.S. Pat. Nos. 5,190,931, 5,107,065 and 5,283,323). An antisense or cosuppression construct would act as a dominant negative regulator of gene activity. While conventional mutations can yield negative regulation of gene activity these effects are most likely recessive. The dominant negative regulation available with a transgenic approach may be advantageous from a breeding perspective. In addition, the ability to restrict the expression of a specific phenotype to the reproductive tissues of the plant by the use of tissue specific promoters may confer agronomic advantages relative to conventional mutations which may have an effect in all tissues in which a mutant gene is ordinarily expressed.




The person skilled in the art will know that special considerations are associated with the use of antisense or cosuppression technologies in order to reduce expression of particular genes. For example, the proper level of expression of sense or antisense genes may require the use of different chimeric genes utilizing different regulatory elements known to the skilled artisan. Once transgenic plants are obtained by one of the methods described above, it will be necessary to screen individual transgenics for those that most effectively display the desired phenotype. Accordingly, the skilled artisan will develop methods for screening large numbers of transformants. The nature of these screens will generally be chosen on practical grounds. For example, one can screen by looking for changes in gene expression by using antibodies specific for the protein encoded by the gene being suppressed, or one could establish assays that specifically measure enzyme activity. A preferred method will be one which allows large numbers of samples to be processed rapidly, since it will be expected that a large number of transformants will be negative for the desired phenotype.




In another embodiment, the present invention concerns an isolated polypeptide comprising: (a) a first amino acid sequence comprising at least 400 amino acids, wherein the first amino acid sequence and the amino acid sequence of SEQ ID NO:24 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, (b) a second amino acid sequence comprising at least 435 amino acids, wherein the second amino acid sequence and the amino acid sequence of SEQ ID NO:28 have at least 70%, 80%, 85%, 90%, or 95% identity based on the Clustal alignment method, or (c) a third amino acid sequence comprising at least 150 amino acids, wherein the third amino acid sequence and the amino acid sequence of SEQ ID NO:26 have at least 90% or 95% identity based on the Clustal alignment method. The first amino acid sequence preferably comprises the amino acid sequence of SEQ ID NO:24, the second amino acid sequence preferably comprises the amino acid sequence of SEQ ID NO:28, and the third amino acid sequence preferably comprises the amino acid sequence of SEQ ID NO:26. The polypeptide preferably is a sucrose phosphate synthase.




The instant polypeptides (or portions thereof) may be produced in heterologous host cells, particularly in the cells of microbial hosts, and can be used to prepare antibodies to these proteins by methods well known to those skilled in the art. The antibodies are useful for detecting the polypeptides of the instant invention in situ in cells or in vitro in cell extracts. Preferred heterologous host cells for production of the instant polypeptides are microbial hosts. Microbial expression systems and expression vectors containing regulatory sequences that direct high level expression of foreign proteins are well known to those skilled in the art. Any of these could be used to construct a chimeric gene for production of the instant polypeptides. This chimeric gene could then be introduced into appropriate microorganisms via transformation to provide high level expression of the encoded sucrose phosphate synthase. An example of a vector for high level expression of the instant polypeptides in a bacterial host is provided (Example 6).




All or a substantial portion of the polynucleotides of the instant invention may also be used as probes for genetically and physically mapping the genes that they are a part of, and used as markers for traits linked to those genes. Such information may be useful in plant breeding in order to develop lines with desired phenotypes. For example, the instant nucleic acid fragments may be used as restriction fragment length polymorphism (RFLP) markers. Southern blots (Maniatis) of restriction-digested plant genomic DNA may be probed with the nucleic acid fragments of the instant invention. The resulting banding patterns may then be subjected to genetic analyses using computer programs such as MapMaker (Lander et al. (1987)


Genomics


1:174-181) in order to construct a genetic map. In addition, the nucleic acid fragments of the instant invention may be used to probe Southern blots containing restriction endonuclease-treated genomic DNAs of a set of individuals representing parent and progeny of a defined genetic cross. Segregation of the DNA polymorphisms is noted and used to calculate the position of the instant nucleic acid sequence in the genetic map previously obtained using this population (Botstein et al. (1980)


Am. J. Hum. Genet.


32:314-331).




The production and use of plant gene-derived probes for use in genetic mapping is described in Bernatzky and Tanksley (1986)


Plant Mol. Biol. Reporter


4:37-41. Numerous publications describe genetic mapping of specific cDNA clones using the methodology outlined above or variations thereof. For example, F2 intercross populations, backcross populations, randomly mated populations, near isogenic lines, and other sets of individuals may be used for mapping. Such methodologies are well known to those skilled in the art.




Nucleic acid probes derived from the instant nucleic acid sequences may also be used for physical mapping (i.e., placement of sequences on physical maps; see Hoheisel et al. In:


Nonmammalian Genomic Analysis: A Practical Guide,


Academic press 1996, pp. 319-346, and references cited therein).




In another embodiment, nucleic acid probes derived from the instant nucleic acid sequences may be used in direct fluorescence in situ hybridization (FISH) mapping (Trask (1991)


Trends Genet.


7:149-154). Although current methods of FISH mapping favor use of large clones (several to several hundred KB; see Laan et al. (1995)


Genome Res.


5:13-20), improvements in sensitivity may allow performance of FISH mapping using shorter probes.




A variety of nucleic acid amplification-based methods of genetic and physical mapping may be carried out using the instant nucleic acid sequences. Examples include allele-specific amplification (Kazazian (1989)


J. Lab. Clin. Med.


11:95-96), polymorphism of PCR-amplified fragments (CAPS; Sheffield et al. (1993)


Genomics


16:325-332), allele-specific ligation (Landegren et al. (1988)


Science


241:1077-1080), nucleotide extension reactions (Sokolov (1990)


Nucleic Acid Res.


18:3671), Radiation Hybrid Mapping (Walter et al. (1997)


Nat. Genet.


7:22-28) and Happy Mapping (Dear and Cook (1989)


Nucleic Acid Res.


17:6795-6807). For these methods, the sequence of a nucleic acid fragment is used to design and produce primer pairs for use in the amplification reaction or in primer extension reactions. The design of such primers is well known to those skilled in the art. In methods employing PCR-based genetic mapping, it may be necessary to identify DNA sequence differences between the parents of the mapping cross in the region corresponding to the instant nucleic acid sequence. This, however, is generally not necessary for mapping methods.




Loss of function mutant phenotypes may be identified for the instant cDNA clones either by targeted gene disruption protocols or by identifying specific mutants for these genes contained in a maize population carrying mutations in all possible genes (Ballinger and Benzer (1989)


Proc. Natl. Acad. Sci USA


86:9402-9406; Koes et al. (1995)


Proc. Natl. Acad. Sci USA


92:8149-8153; Bensen et al. (1995)


Plant Cell


7:75-84). The latter approach may be accomplished in two ways. First, short segments of the instant nucleic acid fragments may be used in polymerase chain reaction protocols in conjunction with a mutation tag sequence primer on DNAs prepared from a population of plants in which Mutator transposons or some other mutation-causing DNA element has been introduced (see Bensen, supra). The amplification of a specific DNA fragment with these primers indicates the insertion of the mutation tag element in or near the plant gene encoding the instant polypeptide. Alternatively, the instant nucleic acid fragment may be used as a hybridization probe against PCR amplification products generated from the mutation population using the mutation tag sequence primer in conjunction with an arbitrary genomic site primer, such as that for a restriction enzyme site-anchored synthetic adaptor. With either method, a plant containing a mutation in the endogenous gene encoding the instant polypeptide can be identified and obtained. This mutant plant can then be used to determine or confirm the natural function of the instant polypeptides disclosed herein.




EXAMPLES




The present invention is further defined in the following Examples, in which parts and percentages are by weight and degrees are Celsius, unless otherwise stated. It should be understood that these Examples, while indicating preferred embodiments of the invention, are given by way of illustration only. From the above discussion and these Examples, one skilled in the art can ascertain the essential characteristics of this invention, and without departing from the spirit and scope thereof, can make various changes and modifications of the invention to adapt it to various usages and conditions. Thus, various modifications of the invention in addition to those shown and described herein will be apparent to those skilled in the art from the foregoing description. Such modifications are also intended to fall within the scope of the appended claims.




The disclosure of each reference set forth herein is incorporated herein by reference in its entirety.




Example 1




Composition of cDNA Libraries; Isolation and Sequencing of cDNA Clones




cDNA libraries representing mRNAs from various catalpa (


Catalpa speciosa


), barley (


Hordeum vulgare


), corn (


Zea mays


), rice (


Oryza sativa


), soybean (


Glycine max


), and wheat (


Triticum aestivum


) tissues were prepared. The characteristics of the libraries are described below. Corn developmental stages (e.g., V-12) are explained in the publication “How a corn plant develops” from the Iowa State University Coop. Ext. Service Special Report No. 48 reprinted June 1993.












TABLE 2











cDNA Libraries from Barley, Corn, Catalpa, Rice, Soybean and Wheat













Library




Tissue




Clone









bsh1




Barley Sheath, Developing Seedling




bsh1.pk0013.d3






ceb5




Corn Embryo 30 Days After Pollination




ceb5.pk0081.g10








ceb5.pk0081.h10






ncs






Catalpa speciosa


Developing Seed




ncs.pk0009.e3






p0093




Corn Stalk And Shank




p0093.cssan39r






p0094




Corn Leaf Collar For The Ear Leaf




p0094.cssst68r







And The Next Next Leaf Above And







Below






p0119




Corn Night Harvested Ear Shoot/




p0119.cmtoh35r







W Husk: V-12 Stage






p0127




Corn Nucellus Tissue, 5 Days After




p0127.cntag51r







Silking






p0130




Corn Wild-Type Internode Tissue




p0130.cwtaf69r






rl0n




Rice 15 Day Old Leaf*




rl0n.pk0002.e3








rl0n.pk0056.d5








rl0n.pk086.i23






rls12




Susceptible Rice Leaf 15 Days After




rls12.pk0024.d8







Germination, 12 Hours After Infection







Of


Magnaporthe grisea


Strain







4360-R-67 (AVR2-YAMO)






sfl1




Soybean Immature Flower




sfl1.pk0048.a12








sfl1.pk0075.d7






wkm1c




Wheat Kernel Malted 55 Hours at




wkm1c.pk0002.g6







22° C.






wr1




Wheat Root, 7 Day Old Seedling,




wr1.pk0028.h11







Light Grown




wr1.pk0046.c10








wr1.pk0112.a8











*This library was normalized essentially as described in U.S. Pat. No. 5,482,845













cDNA libraries may be prepared by any one of many methods available. For example, the cDNAs may be introduced into plasmid vectors by first preparing the cDNA libraries in Uni-ZAP™ XR vectors according to the manufacturer's protocol (Stratagene Cloning Systems, La Jolla, Calif.). The Uni-ZAP™ XR libraries are converted into plasmid libraries according to the protocol provided by Stratagene. Upon conversion, cDNA inserts will be contained in the plasmid vector pBluescript. In addition, the cDNAs may be introduced directly into precut Bluescript II SK(+) vectors (Stratagene) using T4 DNA ligase (New England Biolabs), followed by transfection into DH10B cells according to the manufacturer's protocol (GIBCO BRL Products). Once the cDNA inserts are in plasmid vectors, plasmid DNAs are prepared from randomly picked bacterial colonies containing recombinant pBluescript plasmids, or the insert cDNA sequences are amplified via polymerase chain reaction using primers specific for vector sequences flanking the inserted cDNA sequences. Amplified insert DNAs or plasmid DNAs are sequenced in dye-primer sequencing reactions to generate partial cDNA sequences (expressed sequence tags or “ESTs”; see Adams et al., (1991)


Science


252:1651-1656). The resulting ESTs are analyzed using a Perkin Elmer Model 377 fluorescent sequencer.




Full-insert sequence (FIS) data is generated utilizing a modified transposition protocol. Clones identified for FIS are recovered from archived glycerol stocks as single colonies, and plasmid DNAs are isolated via alkaline lysis. Isolated DNA templates are reacted with vector primed M13 forward and reverse oligonucleotides in a PCR-based sequencing reaction and loaded onto automated sequencers. Confirmation of clone identification is performed by sequence alignment to the original EST sequence from which the FIS request is made.




Confirmed templates are transposed via the Primer Island transposition kit (PE Applied Biosystems, Foster City, Calif.) which is based upon the


Saccharomyces cerevisiae


Ty1 transposable element (Devine and Boeke (1994)


Nucleic Acids Res.


22:3765-3772). The in vitro transposition system places unique binding sites randomly throughout a population of large DNA molecules. The transposed DNA is then used to transform DH10B electro-competent cells (Gibco BRL/Life Technologies, Rockville, Md.) via electroporation. The transposable element contains an additional selectable marker (named DHFR; Fling and Richards (1983)


Nucleic Acids Res.


11:5147-5158), allowing for dual selection on agar plates of only those subclones containing the integrated transposon. Multiple subclones are randomly selected from each transposition reaction, plasmid DNAs are prepared via alkaline lysis, and templates are sequenced (ABI Prism dye-terminator ReadyReaction mix) outward from the transposition event site, utilizing unique primers specific to the binding sites within the transposon.




Sequence data is collected (ABI Prism Collections) and assembled using Phred/Phrap (P. Green, University of Washington, Seattle). Phrep/Phrap is a public domain software program which re-reads the ABI sequence data, re-calls the bases, assigns quality values, and writes the base calls and quality values into editable output files. The Phrap sequence assembly program uses these quality values to increase the accuracy of the assembled sequence contigs. Assemblies are viewed by the Consed sequence editor (D. Gordon, University of Washington, Seattle).




In some of the clones the cDNA fragment corresponds to a portion of the 3′-terminus of the gene and does not cover the entire open reading frame. In order to obtain the upstream information one of two different protocols are used. The first of these methods results in the production of a fragment of DNA containing a portion of the desired gene sequence while the second method results in the production of a fragment containing the entire open reading frame. Both of these methods use two rounds of PCR amplification to obtain fragments from one or more libraries. The libraries some times are chosen based on previous knowledge that the specific gene should be found in a certain tissue and some times are randomly-chosen. Reactions to obtain the same gene may be performed on several libraries in parallel or on a pool of libraries. Library pools are normally prepared using from 3 to 5 different libraries and normalized to a uniform dilution. In the first round of amplification both methods use a vector-specific (forward) primer corresponding to a portion of the vector located at the 5′-terminus of the clone coupled with a gene-specific (reverse) primer. The first method uses a sequence that is complementary to a portion of the already known gene sequence while the second method uses a gene-specific primer complementary to a portion of the 3′-untranslated region (also referred to as UTR). In the second round of amplification a nested set of primers is used for both methods. The resulting DNA fragment is ligated into a pBluescript vector using a commercial kit and following the manufacturer's protocol. This kit is selected from many available from several vendors including Invitrogen (Carlsbad, Calif.), Promega Biotech (Madison, Wis.), and Gibco-BRL (Gaithersburg, Md.). The plasmid DNA is isolated by alkaline lysis method and submitted for sequencing and assembly using Phred/Phrap, as above.




Example 2




Identification of cDNA Clones




cDNA clones encoding sucrose phosphate synthase were identified by conducting BLAST (Basic Local Alignment Search Tool; Altschul et al. (1993)


J. Mol. Biol.


215:403-410) searches for similarity to sequences contained in the BLAST “nr” database (comprising all non-redundant GenBank CDS translations, sequences derived from the 3-dimensional structure Brookhaven Protein Data Bank, the last major release of the SWISS-PROT protein sequence database, EMBL, and DDBJ databases). The cDNA sequences obtained in Example 1 were analyzed for similarity to all publicly available DNA sequences contained in the “nr” database using the BLASTN algorithm provided by the National Center for Biotechnology Information (NCBI). The DNA sequences were translated in all reading frames and compared for similarity to all publicly available protein sequences contained in the “nr” database using the BLASTX algorithm (Gish and States (1993)


Nat. Genet.


3:266-272) provided by the NCBI. For convenience, the P-value (probability) of observing a match of a cDNA sequence to a sequence contained in the searched databases merely by chance as calculated by BLAST are reported herein as “pLog” values, which represent the negative of the logarithm of the reported P-value. Accordingly, the greater the pLog value, the greater the likelihood that the cDNA sequence and the BLAST “hit” represent homologous proteins.




ESTs submitted for analysis are compared to the genbank database as described above. ESTs that contain sequences more 5- or 3-prime can be found by using the BLASTn algorithm (Altschul et al (1997)


Nucleic Acids Res.


25:3389-3402.) against the DuPont proprietary database comparing nucleotide sequences that share common or overlapping regions of sequence homology. Where common or overlapping sequences exist between two or more nucleic acid fragments, the sequences can be assembled into a single contiguous nucleotide sequence, thus extending the original fragment in either the 5 or 3 prime direction. Once the most 5-prime EST is identified, its complete sequence can be determined by Full Insert Sequencing as described in Example 1. Homologous genes belonging to different species can be found by comparing the amino acid sequence of a known gene (from either a proprietary source or a public database) against an EST database using the tBLASTn algorithm. The tBLASTn algorithm searches an amino acid query against a nucleotide database that is translated in all 6 reading frames. This search allows for differences in nucleotide codon usage between different species, and for codon degeneracy.




Example 3




Characterization of cDNA Clones Encoding Sucrose Phosphate Synthase




The BLASTX search using the EST sequences from several clones revealed similarity of the proteins encoded by the cDNAs to sucrose phosphate synthase from different organisms. The BLAST results for each of these ESTs are shown in Table 3:












TABLE 3











BLAST Results for Clones Encoding Polypeptides Homologous






to Sucrose Phosphate Synthase (SPS)













GenBank



















Blast









Accession




pLog






Clone




Protein




Organism




No.




score


















bsh1.pk0013.d3




SPS






Saccharum






AB001338




68.00










officinarum








ceb5.pk0080.g10




SPS






Beta vulgaris






X81975




20.40






ncs.pk0009.e3




SPS






Solanum tuberosum






X73477




46.52






rls12.pk0024.d8




SPS






Saceharum






AB001338




64.7










officinarum








sfl1.pk0048.a12




SPS






Actinidia deliciosa






U85449




54.52






sfl1.pk0075.d7




SPS






Craterostigma






Y11795




52.05










plantagineum








sfl1.pk0080.c11




SPS






Vicia faba






Z56278




30.70






wkm1c.pk0002.g6




SPS






Oryza sativa






U33175




30.00






wr1.pk0028.h11




SPS






Saccharum






AB001338




60.70










officinarum
















The sequence of the entire cDNA insert in clone ncs.pk0009.e3 was determined and is shown in SEQ ID NO:1; the deduced amino acid sequence of this cDNA is shown in SEQ ID NO:2. The sequence of the entire cDNA insert in clone bshl .pk0013.d3 was determined and is shown in SEQ ID NO:3; the deduced amino acid sequence of this cDNA is shown in SEQ ID NO:4. Additional sequence ofthe cDNA insert in clone ceb5.pk0081.g10 was determined and is shown in SEQ ID NO:5; the deduced amino acid sequence of this portion of the cDNA insert is shown in SEQ ID:6. TBLASTN analysis of the proprietary plant EST database indicated that additional corn clones besides ceb5.pk0081.g10 encoded sucrose phosphate synthase. A contig was assembled using the sequence from a portion of the cDNA insert in clones p0130.cwtaf69r, p0093.cssan39r, p0094.cssst68r, p0119.cmtoh35r and p0127.cntag51r. The sequence of this contig is shown in SEQ ID NO:7; the deduced amino acid sequence of this contig is shown in SEQ ID NO:8. TBLASTN analysis of the proprietary plant EST database indicated that additional rice clones besides rls12.pk0024.d8 encoded sucrose phosphate synthase. These are clones rl0n.pk0002.e3, rl0n.pk086.i23 and rl0n.pk0056.d5. A contig was assembled using the sequence from a portion of the cDNA insert in clones rls12.pk0024.d8 and rl0n.pk0002.e3. The sequence of this contig is shown in SEQ ID NO:9; the deduced amino acid sequence of this contig is shown in SEQ ID NO:10. The sequence of a portion of the cDNA insert in clone rl0n.pk086.i23 is shown in SEQ ID NO: 11; the deduced amino acid sequence of this portion of the cDNA insert is shown in SEQ ID NO:12. The sequence of a portion of the cDNA insert in clone rl0n.pk0056.d5 is shown in SEQ ID NO:13; the deduced amino acid sequence of this portion of the cDNA insert is shown in SEQ ID NO:14. TBLASTN analysis of the proprietary plant EST database indicated that additional soybean clones besides sfl1.pk0048.a12 and sfl1.pk0075.d7 encoded sucrose phosphate synthase. These are clones sfl1.pk0080.c11, sdp3c.pk018.k22, sdp2c.pk021.o13 and sgc6c.pk001.14.The sequence of the entire cDNA insert in clone sfl1.pk0048.a12 was determined and is shown in SEQ ID NO:15; the deduced amino acid sequence of this cDNA is shown in SEQ ID NO:16. The nucleotide sequence in SEQ ID NO:15 includes the sequences from clones sfl1.pk0080.c11 (which was previously listed separately), sdp3c.pk018.k22, sdp2c.pk021.o13 and sgc6c.pk001.14. The sequence of a portion of the cDNA insert in clone sfl1.pk0075.d7 is shown in SEQ ID NO:17; the deduced amino acid sequence of this portion of the cDNA insert is shown in SEQ ID NO:18. TBLASTN analysis of the proprietary plant EST database indicated that additional wheat clones besides wkm1c.pk0002.g6 and wr1.pk0028.h11 encoded sucrose phosphate synthase. These are clones wr1.pk0112.a8 and wr1.pk0046.c10. A contig was assembled using the sequence from the entire cDNA insert in clone wr1.pk0028.h11 and a portion of the cDNA insert in clone wr1.pk0112.a8. The sequence of this contig is shown in SEQ ID NO:19; the deduced amino acid sequence of this contig is shown in SEQ ID NO:20. A contig was assembled using the sequence from a portion of the cDNA insert in clones wkm1c.pk0002.g6 and wr1.pk0046.c10. The sequence of this contig is shown in SEQ ID NO:21; the deduced amino acid sequence of this contig is shown in SEQ ID NO:22.




The BLASTX search using the nucleotide sequences mentioned above revealed similarity of the proteins encoded by the cDNAs to sucrose phosphate synthase from different species. The BLASTX results for each of these sequences are shown in Table 4:












TABLE 4











BLAST Results for Clones Encoding Polypeptides Homologous to






Sucrose Phosphate Synthase













BLAST Results
















NCBI General




pLog






Clone




Organism




Identifier No.




Score

















ncs.pk0009.e3






Craterostigma






3915021




105









plantagineum








bsh1.pk0013.d3






Saccharum officinarum






1854378




90






ceb5.pk0081.g10






Musa acuminata






3237273




27.3






Contig of






Craterostigma






3915021




>250






p0130.cwtaf69r






plantagineum








p0093.cssan39r






p0094.cssst68r






p0119.cmtoh35r






p0127.cntag5ir






Contig of






Saccharum officinarum






1854378




131






rls12.pk0024.d8






rl0n.pk0002.e3






rl0n.pk086.i23






Saccharum officinarum






1854378




58.7






rl0n.pk0056.d5






Saccharum officinarum






1854378




68.4






sfl1.pk0048.a12






Citrus unshiu






3915023




>250






sfl1.pk0075.d7






Craterostigma






3915022




56.7









plantagineum








Contig of






Saccharum officinarum






1854378




>250






wr1.pk0112.a8






wr1.pk0028.h11






Contig of






Zea mays






 401114




84.5






wkm1c.pk0002.g6






wr1.k0046.c10














The


Citrus unshiu


sequence is 75.1% identical to the amino acid sequence presented in SEQ ID NO:2 and 83.3% identical to the amino acid sequence presented in SEQ ID NO:16.




The BLASTX search also revealed that of two sugarcane sucrose phosphate synthase amino acid sequences (NCBI General Identifier Nos. 1854376 and 1854378), one of these sequences (NCBI Gene Identifier No. 1854376) displayed considerably more homology to the corn sucrose phosphate synthase amino acid sequence disclosed in U.S. Pat. No. 5,665,892 (NCBI Gene Identifier No. 168626). Accordingly, the nucleic acid fragments described in Table 4 may therefore be classified as encoding polypeptides similar to the corn SPS disclosed in U.S. Pat. No. 5,665,892 or similar to the sugar cane SPS set forth in NCBI Gene Identifier No. 1854378. Using this criterion, the amino acid sequences set forth in SEQ ID NO:2, SEQ ID NO:18 and SEQ ID NO:22 are similar to the SPS sequence disclosed in U.S. Pat. No. 5,665,892, whereas amino acid sequences set forth in SEQ ID NO:4, SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, SEQ ID NO:12, SEQ ID NO:14, SEQ ID NO:16 and SEQ ID NO:20 encode a different SPS that is similar to the sugar cane SPS set forth in NCBI Gene Identifier No. 1854378.




The sequence disclosed in U.S. Pat. No. 5,665,892 is 67.7% similar to the amino acid sequence presented in SEQ ID NO:8, clearly indicating that the corn amino acid sequence presented in SEQ ID NO:8 is distinct from the sucrose phosphate synthase amino acid sequence disclosed in U.S. Pat. No. 5,665,892.




Sequence alignments and percent similarity calculations were performed using the Megalign program of the LASERGENE bioinformatics computing suite (DNASTAR Inc., Madison, Wis.). Multiple alignment of the sequences and percent similarity calculations were performed using the Clustal method of alignment (Higgins, D. G. and Sharp, P. M. (1989)


CABIOS.


5:151-153) using the default parameters (GAP PENALTY=10, GAP LENGTH PENALTY=10).




BLAST scores and probabilities indicate that the instant nucleic acid fragments encode entire soybean and substantial portions of barley, corn, Catalpa, rice, soybean and wheat sucrose phosphate synthase enzymes that are distinguishable from other sucrose phosphate sequences known in the art. These sequences also represent the first barley, Catalpa, rice, soybean and wheat sequences encoding the instant sucrose phosphate synthase protein.




The BLASTX search using the EST sequences from clones listed in Table 5 revealed similarity of the polypeptides encoded by the cDNAs to sucrose phosphate synthase from


Saccharum officinarum


(NCBI GenBank Identifier (GI) No. 1854378),


Arabidopsis thaliana


(NCBI GI No. 7433836), and


Citrus unshiu


(NCBI GI No. 3915023). Shown in Table 5 are the BLAST results for individual ESTs (“EST”), the sequences of the entire cDNA inserts comprising the indicated cDNA clones (“FIS”), the sequences of contigs assembled from two or more ESTs (“Contig”), sequences of contigs assembled from an FIS and one or more ESTs (“Contig*”), or sequences encoding an entire protein derived from an FIS, a contig, or an FIS and PCR (“CGS”):












TABLE 5











BLAST Results for Sequences Encoding Polypeptides Homologous






to Sucrose Phosphate Synthase













BLAST Results














Clone




Status




NCBI GI No.




pLog Score









ceb5.pk0081.h10(FIS)




CGS




3915023




>180.00






rls12.pk0024.d8




FIS




1854378




>180.00






wkm1c.pk0002.g6




FIS




7433836




  104.00














Isolation and initial characterization of clones rls12.pk0024.d8 and wkm1c.pk0002.g6 have been previously described in U.S. patent application Ser. No. 09/697,367 filed on Oct. 26, 2000 and in WO 99/57285 which published Nov. 11, 1999.





FIGS. 1A

,


1


B,


1


C, and


1


D present an alignment of the amino acid sequence set forth in SEQ ID NO:24 and the


Citrus unshiu


sequence (NCBI GI No.3915023; SEQ ID NO:29). The data in Table 6 represents a calculation of the percent identity of the amino acid sequence set forth in SEQ ID NO:24 and the


Citrus unshiu


sequence (NCBI GI No. 3915023; SEQ ID NO:29).












TABLE 6











Percent Identity of Amino Acid Sequences Deduced From the






Nucleotide Sequences of cDNA Clones Encoding Polypeptides






Homologous to Sucrose Phosphate Synthase















Percent Identity to







SEQ ID NO.




NCBI GI No. 3915023; SEQ ID NO:29











2




66.0















Sequence alignments and percent identity calculations were performed using the Megalign program of the LASERGENE bioinformatics computing suite (DNASTAR Inc., Madison, Wis.). Multiple alignment of the sequences was performed using the Clustal method of alignment (Higgins and Sharp (1989)


CABIOS.


5:151-153) with the default parameters (GAP PENALTY=10, GAP LENGTH PENALTY=10). Default parameters for pairwise alignments using the Clustal method were KTUPLE 1, GAP PENALTY=3, WINDOW=5 and DIAGONALS SAVED=5. Sequence alignments and BLAST scores and probabilities indicate that the nucleic acid fragments comprising the instant cDNA clones encode a substantial portion of a sucrose phosphate synthase.




Example 4




Expression of Chimeric Genes in Monocot Cells




A chimeric gene comprising a cDNA encoding the instant polypeptide in sense orientation with respect to the maize 27 kD zein promoter that is located 5′ to the cDNA fragment, and the 10 kD zein 3′ end that is located 3′ to the cDNA fragment, can be constructed. The cDNA fragment of this gene may be generated by polymerase chain reaction (PCR) of the cDNA clone using appropriate oligonucleotide primers. Cloning sites (NcoI or SmaI) can be incorporated into the oligonucleotides to provide proper orientation of the DNA fragment when inserted into the digested vector pML103 as described below. Amplification is then performed in a standard PCR. The amplified DNA is then digested with restriction enzymes NcoI and SmaI and fractionated on an agarose gel. The appropriate band can be isolated from the gel and combined with a 4.9 kb NcoI-SmaI fragment of the plasmid pML103. Plasmid pML103 has been deposited under the terms of the Budapest Treaty at ATCC (American Type Culture Collection, 10801 University Blvd., Manassas, Va. 20110-2209), and bears accession number ATCC 97366. The DNA segment from pML103 contains a 1.05 kb SalI-NcoI promoter fragment of the maize 27 kD zein gene and a 0.96 kb SmaI-SalI fragment from the 3′ end of the maize 10 kD zein gene in the vector pGem9Zf(+) (Promega). Vector and insert DNA can be ligated at 15° C. overnight, essentially as described (Maniatis). The ligated DNA may then be used to transform


E. coli


XL1-Blue (Epicurian Coli XL-1 Blue™; Stratagene). Bacterial transformants can be screened by restriction enzyme digestion of plasmid DNA and limited nucleotide sequence analysis using the dideoxy chain termination method (Sequenase™ DNA Sequencing Kit; U.S. Biochemical). The resulting plasmid construct would comprise a chimeric gene encoding, in the 5′ to 3′ direction, the maize 27 kD zein promoter, a cDNA fragment encoding the instant polypeptide, and the 10 kD zein 3′ region.




The chimeric gene described above can then be introduced into corn cells by the following procedure. Immature corn embryos can be dissected from developing caryopses derived from crosses of the inbred corn lines H99 and LH132. The embryos are isolated 10 to 11 days after pollination when they are 1.0 to 1.5 mm long. The embryos are then placed with the axis-side facing down and in contact with agarose-solidified N6 medium (Chu et al. (1975)


Sci. Sin. Peking


18:659-668). The embryos are kept in the dark at 27° C. Friable embryogenic callus consisting of undifferentiated masses of cells with somatic proembryoids and embryoids borne on suspensor structures proliferates from the scutellum of these immature embryos. The embryogenic callus isolated from the primary explant can be cultured on N6 medium and sub-cultured on this medium every 2 to 3 weeks.




The plasmid, p35S/Ac (obtained from Dr. Peter Eckes, Hoechst Ag, Frankfurt, Germany) may be used in transformation experiments in order to provide for a selectable marker. This plasmid contains the Pat gene (see European Patent Publication 0 242 236) which encodes phosphinothricin acetyl transferase (PAT). The enzyme PAT confers resistance to herbicidal glutamine synthetase inhibitors such as phosphinothricin. The pat gene in p35S/Ac is under the control of the 35S promoter from Cauliflower Mosaic Virus (Odell et al. (1985)


Nature


313:810-812) and the 3′ region of the nopaline synthase gene from the T-DNA of the Ti plasmid of


Agrobacterium tumefaciens.






The particle bombardment method (Klein et al. (1987)


Nature


327:70-73) may be used to transfer genes to the callus culture cells. According to this method, gold particles (1 μm in diameter) are coated with DNA using the following technique. Ten μg of plasmid DNAs are added to 50 μL of a suspension of gold particles (60 mg per mL). Calcium chloride (50 μL of a 2.5 M solution) and spermidine free base (20 μL of a 1.0 M solution) are added to the particles. The suspension is vortexed during the addition of these solutions. After 10 minutes, the tubes are briefly centrifuged (5 sec at 15,000 rpm) and the supernatant removed. The particles are resuspended in 200 μL of absolute ethanol, centrifuged again and the supernatant removed. The ethanol rinse is performed again and the particles resuspended in a final volume of 30 μL of ethanol. An aliquot (5 μL) of the DNA-coated gold particles can be placed in the center of a Kapton™ flying disc (Bio-Rad Labs). The particles are then accelerated into the corn tissue with a Biolistic™ PDS-1000/He (Bio-Rad Instruments, Hercules Calif.), using a helium pressure of 1000 psi, a gap distance of 0.5 cm and a flying distance of 1.0 cm.




For bombardment, the embryogenic tissue is placed on filter paper over agarose-solidified N6 medium. The tissue is arranged as a thin lawn and covered a circular area of about 5 cm in diameter. The petri dish containing the tissue can be placed in the chamber of the PDS-1000/He approximately 8 cm from the stopping screen. The air in the chamber is then evacuated to a vacuum of 28 inches of Hg. The macrocarrier is accelerated with a helium shock wave using a rupture membrane that bursts when the He pressure in the shock tube reaches 1000 psi.




Seven days after bombardment the tissue can be transferred to N6 medium that contains bialophos (5 mg per liter) and lacks casein or proline. The tissue continues to grow slowly on this medium. After an additional 2 weeks the tissue can be transferred to fresh N6 medium containing bialophos. After 6 weeks, areas of about 1 cm in diameter of actively growing callus can be identified on some of the plates containing the bialophos-supplemented medium. These calli may continue to grow when sub-cultured on the selective medium.




Plants can be regenerated from the transgenic callus by first transferring clusters of tissue to N6 medium supplemented with 0.2 mg per liter of 2,4-D. After two weeks the tissue can be transferred to regeneration medium (Fromm et al. (1990)


Bio/Technology


8:833-839).




Example 5




Expression of Chimeric Genes in Dicot Cells




A seed-specific expression cassette composed of the promoter and transcription terminator from the gene encoding the β subunit of the seed storage protein phaseolin from the bean


Phaseolus vulgaris


(Doyle et al. (1986)


J. Biol. Chem.


261:9228-9238) can be used for expression of the instant polypeptides in transformed soybean. The phaseolin cassette includes about 500 nucleotides upstream (5′) from the translation initiation codon and about 1650 nucleotides downstream (3′) from the translation stop codon of phaseolin. Between the 5′ and 3′ regions are the unique restriction endonuclease sites Nco I (which includes the ATG translation initiation codon), Sma I, Kpn I and Xba I. The entire cassette is flanked by Hind III sites.




The cDNA fragment of this gene may be generated by polymerase chain reaction (PCR) of the cDNA clone using appropriate oligonucleotide primers. Cloning sites can be incorporated into the oligonucleotides to provide proper orientation of the DNA fragment when inserted into the expression vector. Amplification is then performed as described above, and the isolated fragment is inserted into a pUC18 vector carrying the seed expression cassette.




Soybean embryos may then be transformed with the expression vector comprising sequences encoding the instant polypeptides. To induce somatic embryos, cotyledons, 3-5 mm in length dissected from surface sterilized, immature seeds of the soybean cultivar A2872, can be cultured in the light or dark at 26° C. on an appropriate agar medium for 6-10 weeks. Somatic embryos which produce secondary embryos are then excised and placed into a suitable liquid medium. After repeated selection for clusters of somatic embryos which multiplied as early, globular staged embryos, the suspensions are maintained as described below.




Soybean embryogenic suspension cultures can be maintained in 35 mL liquid media on a rotary shaker, 150 rpm, at 26° C. with florescent lights on a 16:8 hour day/night schedule. Cultures are subcultured every two weeks by inoculating approximately 35 mg of tissue into 35 mL of liquid medium.




Soybean embryogenic suspension cultures may then be transformed by the method of particle gun bombardment (Klein et al. (1987)


Nature (London)


327:70-73, U.S. Pat. No. 4,945,050). A DuPont Biolistic™ PDS1000/HE instrument (helium retrofit) can be used for these transformations.




A selectable marker gene which can be used to facilitate soybean transformation is a chimeric gene composed of the 35S promoter from Cauliflower Mosaic Virus (Odell et al. (1985)


Nature


313:810-812), the hygromycin phosphotransferase gene from plasmid pJR225 (from


E. coli;


Gritz et al.(1983)


Gene


25:179-188) and the 3′ region of the nopaline synthase gene from the T-DNA of the Ti plasmid of


Agrobacterium tumefaciens.


The seed expression cassette comprising the phaseolin 5′ region, the fragment encoding the instant polypeptide and the phaseolin 3′ region can be isolated as a restriction fragment. This fragment can then be inserted into a unique restriction site of the vector carrying the marker gene.




To 50 μL of a 60 mg/mL 1 μm gold particle suspension is added (in order): 5 μL DNA (1 μg/μL), 20 μL spermidine (0.1 M), and 50 μL CaCl


2


(2.5 M). The particle preparation is then agitated for three minutes, spun in a microfuge for 10 seconds and the supernatant removed. The DNA-coated particles are then washed once in 400 μL 70% ethanol and resuspended in 40 μL of anhydrous ethanol. The DNA/particle suspension can be sonicated three times for one second each. Five μL of the DNA-coated gold particles are then loaded on each macro carrier disk.




Approximately 300-400 mg of a two-week-old suspension culture is placed in an empty 60×15 mm petri dish and the residual liquid removed from the tissue with a pipette. For each transformation experiment, approximately 5-10 plates of tissue are normally bombarded. Membrane rupture pressure is set at 1100 psi and the chamber is evacuated to a vacuum of 28 inches mercury. The tissue is placed approximately 3.5 inches away from the retaining screen and bombarded three times. Following bombardment, the tissue can be divided in half and placed back into liquid and cultured as described above.




Five to seven days post bombardment, the liquid media may be exchanged with fresh media, and eleven to twelve days post bombardment with fresh media containing 50 mg/mL hygromycin. This selective media can be refreshed weekly. Seven to eight weeks post bombardment, green, transformed tissue may be observed growing from untransformed, necrotic embryogenic clusters. Isolated green tissue is removed and inoculated into individual flasks to generate new, clonally propagated, transformed embryogenic suspension cultures. Each new line may be treated as an independent transformation event. These suspensions can then be subcultured and maintained as clusters of immature embryos or regenerated into whole plants by maturation and germination of individual somatic embryos.




Example 6




Expression of Chimeric Genes in Microbial Cells




The cDNAs encoding the instant polypeptides can be inserted into the T7


E. coli


expression vector pBT430. This vector is a derivative of pET-3a (Rosenberg et al. (1987)


Gene


56:125-135) which employs the bacteriophage T7 RNA polymerase/T7 promoter system. Plasmid pBT430 was constructed by first destroying the EcoR I and Hind III sites in pET-3a at their original positions. An oligonucleotide adaptor containing EcoR I and Hind III sites was inserted at the BamH I site of pET-3a. This created pET-3aM with additional unique cloning sites for insertion of genes into the expression vector. Then, the Nde I site at the position of translation initiation was converted to an Nco I site using oligonucleotide-directed mutagenesis. The DNA sequence of pET-3aM in this region, 5′-CATATGG, was converted to 5′-CCCATGG in pBT430.




Plasmid DNA containing a cDNA may be appropriately digested to release a nucleic acid fragment encoding the protein. This fragment may then be purified on a 1% low melting agarose gel. Buffer and agarose contain 10 μg/ml ethidium bromide for visualization of the DNA fragment. The fragment can then be purified from the agarose gel by digestion with GELase™ (Epicentre Technologies, Madison, Wis.) according to the manufacturer's instructions, ethanol precipitated, dried and resuspended in 20 μL of water. Appropriate oligonucleotide adapters may be ligated to the fragment using T4 DNA ligase (New England Biolabs (NEB), Beverly, Mass.). The fragment containing the ligated adapters can be purified from the excess adapters using low melting agarose as described above. The vector pBT430 is digested, dephosphorylated with alkaline phosphatase (NEB) and deproteinized with phenol/chloroform as described above. The prepared vector pBT430 and fragment can then be ligated at 16° C. for 15 hours followed by transformation into DH5 electrocompetent cells (GIBCO BRL). Transformants can be selected on agar plates containing LB media and 100 μg/mL ampicillin. Transformants containing the gene encoding the instant polypeptide are then screened for the correct orientation with respect to the T7 promoter by restriction enzyme analysis.




For high level expression, a plasmid clone with the cDNA insert in the correct orientation relative to the T7 promoter can be transformed into


E. coli


strain BL21 (DE3) (Studier et al. (1986)


J. Mol. Biol.


189:113-130). Cultures are grown in LB medium containing ampicillin (100 mg/L) at 25° C. At an optical density at 600 nm of approximately 1, IPTG (isopropylthio-β-galactoside, the inducer) can be added to a final concentration of 0.4 mM and incubation can be continued for 3 h at 25°. Cells are then harvested by centrifugation and re-suspended in 50 μL of 50 mM Tris-HCl at pH 8.0 containing 0.1 mM DTT and 0.2 mM phenyl methylsulfonyl fluoride. A small amount of 1 mm glass beads can be added and the mixture sonicated 3 times for about 5 seconds each time with a microprobe sonicator. The mixture is centrifuged and the protein concentration of the supernatant determined. One μg of protein from the soluble fraction of the culture can be separated by SDS-polyacrylamide gel electrophoresis. Gels can be observed for protein bands migrating at the expected molecular weight.

















                  






#             SEQUENCE LISTING




















<160> NUMBER OF SEQ ID NOS: 29













<210> SEQ ID NO 1






<211> LENGTH: 2236






<212> TYPE: DNA






<213> ORGANISM: Catalpa speciosa













<400> SEQUENCE: 1













gcacgagaga tagaggagca gtggcgtttg tatgatggtt ttgatccaat ac






#tagagcgt     60













aaactacgtg ctaggattag gcgtaatgtc agctgttacg gaaggttcat gc






#ctcgcatg    120













gttgtaattc cacctgggat ggaattccat cacatagttc cacatgatgg ag






#acatggat    180













actgaagctg aagcaaacga agatggaaag tctccagaaa cacctatttg gg






#cagaggta    240













atgcgtttct tttcaaatcc aaggaagcct atgattcttg cacttgccag gc






#cagatcca    300













aagaaaaacc tcactacctt ggtcaaagca tttggggaat gtcgaccact aa






#gggagctt    360













gctaatctta ccttgataat gggtaataga gataatattg atgaaatgtc gg






#gaaccaat    420













gcttcagttc ttctatcaat ccttaagatg attgacaagt atgatctcta tg






#gtcaagtg    480













gcatatccta aacatcacaa gcaacatgat gttcctgaaa tttaccgtct ag






#cagcaaag    540













accaagggtg ttttcataaa tccagctttt atcgagcctt ttgggcttac tc






#tcattgag    600













gctacagcat atggtttgcc aattgttgcg acgaaaaatg gtggccctgt tg






#atatacac    660













aaggttctgg acaatggtct ccttgttgat ccccacaatc agcagtccat tg






#ctgatgct    720













cttttgaagc tggttgcgga taagcatctc tgggcgaaat gtagagcaaa tg






#gattaaaa    780













aatattcacc ttttttcatg gccagaacat tgtagaactt atctctccaa aa






#tagcaagt    840













tgcaaaccaa ggcaacctcg ttggttgaga aatgacgatg atgatgaaaa tt






#cagaatca    900













gattcaccaa gtgactcctt gagggatata caagatatat ctttgaacct ca






#agttctcc    960













tttgaaggag ataagaatga gaatcgggaa aatatcggtg gttccttaga ct






#ctgaagac   1020













cgaaagagta agctagaaaa tgctgtattg acgtggtcta agggtgtggt ga






#aaggtgca   1080













caaaaatctg ggtctactga taaaggagac cagaatccta atgctggtaa gt






#tcccagca   1140













ttgaggagga gaaaacacat ttttgtgatt gctgtggata atgatgcaag tg






#ctggtctt   1200













tctgaaagtg ttaaaaagat ctttgaggct gtggagaagg aaaaaagtga ag






#gctcagtt   1260













ggatttatat tagctacgtc ctttaacatc acacaaacat gttcttttct gg






#tttcagaa   1320













ggattgaacc ccacagaatt tgacgcattt atatgcaata gtggcggtga tc






#tttattac   1380













tcatctattc attcagaaaa taatccgttt gtggtggact tgtattatca tt






#cacatatt   1440













gaataccgat ggggagggga agggttgagg aagactttag tgcgttgggc ag






#cttctata   1500













actgataaga ctggagaaaa ggaagaacac attattgttg aagatgaaga ga






#cttcggcc   1560













gactactgct attcttttaa agttcaaaag cctggagtgg ttcccccagt aa






#aggaactt   1620













agaaagttga tgagaattca ggcactacga tgtcatgtca tccattgtca aa






#atggaagt   1680













aagatcaacg taattccagt ttcggcttct cgttcccaag cactcaggta tc






#tgtatctt   1740













cgctggggta tggacttgtc gaaagtagtt gtttttgtcg gggaaagcgg ag






#acagcgac   1800













tatgaaggtt tgcttggcgg cgttaacaag tctgtagtgc tgggcggagt tt






#gcaccaat   1860













gcgagcagcc aactccatgc caaccgaagc tatcctctca cagatgtcgt at






#attatgac   1920













agtcctaata ttaccagaac ctctgaagga tttagcagct cggatctccg ag






#cctcgctg   1980













gcggaggtag gtgttctcaa gacctaaaat ttttgcttac cgccttgtac ac






#atgttcag   2040













cttaaaataa taagcatcaa cttatggatt gcttcctgtt tataattcgg ct






#gcataatg   2100













atgtgttata ttttctcaat aaacctttga gatgagacca ttttttcttt gt






#tgcccttt   2160













ctggaggaat tgaaactgta atgggacatg ttcaattttc tcctttgtca ta






#caagcaaa   2220













aaaaaaaaaa aaatca             






#                  






#                  






#  2236




















<210> SEQ ID NO 2






<211> LENGTH: 668






<212> TYPE: PRT






<213> ORGANISM: Catalpa speciosa













<400> SEQUENCE: 2













Ala Arg Glu Ile Glu Glu Gln Trp Arg Leu Ty






#r Asp Gly Phe Asp Pro






  1               5 






#                 10 






#                 15













Ile Leu Glu Arg Lys Leu Arg Ala Arg Ile Ar






#g Arg Asn Val Ser Cys






             20     






#             25     






#             30













Tyr Gly Arg Phe Met Pro Arg Met Val Val Il






#e Pro Pro Gly Met Glu






         35         






#         40         






#         45













Phe His His Ile Val Pro His Asp Gly Asp Me






#t Asp Thr Glu Ala Glu






     50             






#     55             






#     60













Ala Asn Glu Asp Gly Lys Ser Pro Glu Thr Pr






#o Ile Trp Ala Glu Val






 65                 






# 70                 






# 75                 






# 80













Met Arg Phe Phe Ser Asn Pro Arg Lys Pro Me






#t Ile Leu Ala Leu Ala






                 85 






#                 90 






#                 95













Arg Pro Asp Pro Lys Lys Asn Leu Thr Thr Le






#u Val Lys Ala Phe Gly






            100      






#           105      






#           110













Glu Cys Arg Pro Leu Arg Glu Leu Ala Asn Le






#u Thr Leu Ile Met Gly






        115          






#       120          






#       125













Asn Arg Asp Asn Ile Asp Glu Met Ser Gly Th






#r Asn Ala Ser Val Leu






    130              






#   135              






#   140













Leu Ser Ile Leu Lys Met Ile Asp Lys Tyr As






#p Leu Tyr Gly Gln Val






145                 1






#50                 1






#55                 1






#60













Ala Tyr Pro Lys His His Lys Gln His Asp Va






#l Pro Glu Ile Tyr Arg






                165  






#               170  






#               175













Leu Ala Ala Lys Thr Lys Gly Val Phe Ile As






#n Pro Ala Phe Ile Glu






            180      






#           185      






#           190













Pro Phe Gly Leu Thr Leu Ile Glu Ala Thr Al






#a Tyr Gly Leu Pro Ile






        195          






#       200          






#       205













Val Ala Thr Lys Asn Gly Gly Pro Val Asp Il






#e His Lys Val Leu Asp






    210              






#   215              






#   220













Asn Gly Leu Leu Val Asp Pro His Asn Gln Gl






#n Ser Ile Ala Asp Ala






225                 2






#30                 2






#35                 2






#40













Leu Leu Lys Leu Val Ala Asp Lys His Leu Tr






#p Ala Lys Cys Arg Ala






                245  






#               250  






#               255













Asn Gly Leu Lys Asn Ile His Leu Phe Ser Tr






#p Pro Glu His Cys Arg






            260      






#           265      






#           270













Thr Tyr Leu Ser Lys Ile Ala Ser Cys Lys Pr






#o Arg Gln Pro Arg Trp






        275          






#       280          






#       285













Leu Arg Asn Asp Asp Asp Asp Glu Asn Ser Gl






#u Ser Asp Ser Pro Ser






    290              






#   295              






#   300













Asp Ser Leu Arg Asp Ile Gln Asp Ile Ser Le






#u Asn Leu Lys Phe Ser






305                 3






#10                 3






#15                 3






#20













Phe Glu Gly Asp Lys Asn Glu Asn Arg Glu As






#n Ile Gly Gly Ser Leu






                325  






#               330  






#               335













Asp Ser Glu Asp Arg Lys Ser Lys Leu Glu As






#n Ala Val Leu Thr Trp






            340      






#           345      






#           350













Ser Lys Gly Val Val Lys Gly Ala Gln Lys Se






#r Gly Ser Thr Asp Lys






        355          






#       360          






#       365













Gly Asp Gln Asn Pro Asn Ala Gly Lys Phe Pr






#o Ala Leu Arg Arg Arg






    370              






#   375              






#   380













Lys His Ile Phe Val Ile Ala Val Asp Asn As






#p Ala Ser Ala Gly Leu






385                 3






#90                 3






#95                 4






#00













Ser Glu Ser Val Lys Lys Ile Phe Glu Ala Va






#l Glu Lys Glu Lys Ser






                405  






#               410  






#               415













Glu Gly Ser Val Gly Phe Ile Leu Ala Thr Se






#r Phe Asn Ile Thr Gln






            420      






#           425      






#           430













Thr Cys Ser Phe Leu Val Ser Glu Gly Leu As






#n Pro Thr Glu Phe Asp






        435          






#       440          






#       445













Ala Phe Ile Cys Asn Ser Gly Gly Asp Leu Ty






#r Tyr Ser Ser Ile His






    450              






#   455              






#   460













Ser Glu Asn Asn Pro Phe Val Val Asp Leu Ty






#r Tyr His Ser His Ile






465                 4






#70                 4






#75                 4






#80













Glu Tyr Arg Trp Gly Gly Glu Gly Leu Arg Ly






#s Thr Leu Val Arg Trp






                485  






#               490  






#               495













Ala Ala Ser Ile Thr Asp Lys Thr Gly Glu Ly






#s Glu Glu His Ile Ile






            500      






#           505      






#           510













Val Glu Asp Glu Glu Thr Ser Ala Asp Tyr Cy






#s Tyr Ser Phe Lys Val






        515          






#       520          






#       525













Gln Lys Pro Gly Val Val Pro Pro Val Lys Gl






#u Leu Arg Lys Leu Met






    530              






#   535              






#   540













Arg Ile Gln Ala Leu Arg Cys His Val Ile Hi






#s Cys Gln Asn Gly Ser






545                 5






#50                 5






#55                 5






#60













Lys Ile Asn Val Ile Pro Val Ser Ala Ser Ar






#g Ser Gln Ala Leu Arg






                565  






#               570  






#               575













Tyr Leu Tyr Leu Arg Trp Gly Met Asp Leu Se






#r Lys Val Val Val Phe






            580      






#           585      






#           590













Val Gly Glu Ser Gly Asp Ser Asp Tyr Glu Gl






#y Leu Leu Gly Gly Val






        595          






#       600          






#       605













Asn Lys Ser Val Val Leu Gly Gly Val Cys Th






#r Asn Ala Ser Ser Gln






    610              






#   615              






#   620













Leu His Ala Asn Arg Ser Tyr Pro Leu Thr As






#p Val Val Tyr Tyr Asp






625                 6






#30                 6






#35                 6






#40













Ser Pro Asn Ile Thr Arg Thr Ser Glu Gly Ph






#e Ser Ser Ser Asp Leu






                645  






#               650  






#               655













Arg Ala Ser Leu Ala Glu Val Gly Val Leu Ly






#s Thr






            660      






#           665




















<210> SEQ ID NO 3






<211> LENGTH: 863






<212> TYPE: DNA






<213> ORGANISM: Hordeum vulgare













<400> SEQUENCE: 3













gcacgagctt cctcgatagt agaaagaagg ggaagaactg aaaaacaagt ta






#tctttgaa     60













gacgcagaac actcctcaac atcttgcctt gcgtttagag tggtcaatcc aa






#attattta    120













cctcctttga aggagctgca gaagttgatg agaatccagt cactacgctg tc






#atgctctt    180













tataaccaca gtgctaccag gctatctgta attccaattc atgcatcacg ct






#cccaggct    240













ctaaggtacc tgtctgttcg ttggggcata gagttgcgaa acgtcgtgat tc






#ttgtcggt    300













gaaagcggcg attcagatta cgaagagctg tttggaggcc ttcacaagac ga






#tcgtcctg    360













aagggcgagt tcaacacacc cgcaaacaga atccacacgg tcaggcggta cc






#cgctgcaa    420













gacgtcatcg cgctcgattg ctcgaacatc atcggggtcg agggctgcag ca






#ccgacgac    480













ctgaccccta ctctgaagac gctcggcata ccgacgaagt gacacataga ca






#tatatttt    540













tgcctttttt tctttatacg atgagaggac cgaacaatat acgaatatag ca






#aatatata    600













ctatcgtttc catgctggat ggaaataccg attttgcctg caagccgtgt tg






#tggccgtc    660













accttgagct gtgaataacg acattacgat catgttggcc ctgtcatgtg ga






#aattcggc    720













gatgaagaac gaatccagag caggagggaa atctgttgaa cgcttcaaaa gt






#gttgttaa    780













gagaacattt gaaggaagca ttgatccaaa aaaaaaaaaa aaaaaaaata aa






#ctcgaggg    840













gggcccgtac acaaggtacg ccc           






#                  






#               863




















<210> SEQ ID NO 4






<211> LENGTH: 171






<212> TYPE: PRT






<213> ORGANISM: Hordeum vulgare













<400> SEQUENCE: 4













Ala Ser Ser Ile Val Glu Arg Arg Gly Arg Th






#r Glu Lys Gln Val Ile






  1               5 






#                 10 






#                 15













Phe Glu Asp Ala Glu His Ser Ser Thr Ser Cy






#s Leu Ala Phe Arg Val






             20     






#             25     






#             30













Val Asn Pro Asn Tyr Leu Pro Pro Leu Lys Gl






#u Leu Gln Lys Leu Met






         35         






#         40         






#         45













Arg Ile Gln Ser Leu Arg Cys His Ala Leu Ty






#r Asn His Ser Ala Thr






     50             






#     55             






#     60













Arg Leu Ser Val Ile Pro Ile His Ala Ser Ar






#g Ser Gln Ala Leu Arg






 65                 






# 70                 






# 75                 






# 80













Tyr Leu Ser Val Arg Trp Gly Ile Glu Leu Ar






#g Asn Val Val Ile Leu






                 85 






#                 90 






#                 95













Val Gly Glu Ser Gly Asp Ser Asp Tyr Glu Gl






#u Leu Phe Gly Gly Leu






            100      






#           105      






#           110













His Lys Thr Ile Val Leu Lys Gly Glu Phe As






#n Thr Pro Ala Asn Arg






        115          






#       120          






#       125













Ile His Thr Val Arg Arg Tyr Pro Leu Gln As






#p Val Ile Ala Leu Asp






    130              






#   135              






#   140













Cys Ser Asn Ile Ile Gly Val Glu Gly Cys Se






#r Thr Asp Asp Leu Thr






145                 1






#50                 1






#55                 1






#60













Pro Thr Leu Lys Thr Leu Gly Ile Pro Thr Ly






#s






                165  






#               170




















<210> SEQ ID NO 5






<211> LENGTH: 511






<212> TYPE: DNA






<213> ORGANISM: Zea mays






<220> FEATURE:






<221> NAME/KEY: unsure






<222> LOCATION: (169)






<221> NAME/KEY: unsure






<222> LOCATION: (333)






<221> NAME/KEY: unsure






<222> LOCATION: (379)






<221> NAME/KEY: unsure






<222> LOCATION: (404)






<221> NAME/KEY: unsure






<222> LOCATION: (406)






<221> NAME/KEY: unsure






<222> LOCATION: (409)






<221> NAME/KEY: unsure






<222> LOCATION: (431)






<221> NAME/KEY: unsure






<222> LOCATION: (491)






<221> NAME/KEY: unsure






<222> LOCATION: (494)






<221> NAME/KEY: unsure






<222> LOCATION: (496)






<221> NAME/KEY: unsure






<222> LOCATION: (506)













<400> SEQUENCE: 5













cagaaacctc caggatccga ctccaatcga atcgccaaag cagacagggg cg






#ctcgcggg     60













ggcgccgagc tcgacggggc gagatggccg ggaacgactg gatcaacagc ta






#cctggagg    120













ctattctgga cgctggcggg gccgcgggag atctctcggc agccgcagna gc






#ggggacgg    180













ccgcgacggg acggccgtgg agaagcggga taagtcgtcg ctgatgctcc ga






#gagcgcgg    240













ccggttcagc cccgcgcgat acttcgtcga ggaggtcatc tccggcttcg ac






#gagaccga    300













cctctacaag acctgggtcc gcactcggct atnaggagtc cccaggaacg ga






#acacgcgg    360













ctggagacat gtcgtggang attggaactc ccaggaagaa gaanantana ga






#gagaagct    420













acatttctaa naacgcatga tttagaaact cgtaatatct ctattgtcta aa






#ctattgat    480













gagaaaggaa ncantntatc atcatnatga g        






#                  






#         511




















<210> SEQ ID NO 6






<211> LENGTH: 18






<212> TYPE: PRT






<213> ORGANISM: Zea mays













<400> SEQUENCE: 6













Met Ala Gly Asn Asp Trp Ile Asn Ser Tyr Le






#u Glu Ala Ile Leu Asp






  1               5 






#                 10 






#                 15













Ala Gly




















<210> SEQ ID NO 7






<211> LENGTH: 1611






<212> TYPE: DNA






<213> ORGANISM: Zea mays






<220> FEATURE:






<221> NAME/KEY: unsure






<222> LOCATION: (14)






<221> NAME/KEY: unsure






<222> LOCATION: (1424)






<221> NAME/KEY: unsure






<222> LOCATION: (1469)






<221> NAME/KEY: unsure






<222> LOCATION: (1505)






<221> NAME/KEY: unsure






<222> LOCATION: (1515)






<221> NAME/KEY: unsure






<222> LOCATION: (1560)













<400> SEQUENCE: 7













gggagtatac agantggatc tactaacaag gcagatttct gcacctgatg tt






#gattggag     60













ttatggggaa cctactgaga tgctcagtcc aataagttca gaaaactttg gg






#cttgagct    120













gggcgaaagc agtggtgcct atattgtccg gataccattc ggaccaagag ac






#aaatatat    180













ccctaaagag catctatggc ctcacatcca ggaatttgtt gatggcgcac tt






#gtccatat    240













catgcagatg tccaaggtcc ttggagaaca aattggtagt gggcaaccag ta






#tggcctgt    300













tgttatacat ggacactatg ctgatgctgg tgattctgct gctttactgt ct






#ggggcact    360













caatgtaccc atggtattca ctggtcattc tcttggcaga gataagttgg ac






#cagatttt    420













gaagcaaggg cgtcaaacca gggatgaaat aaatgcaacc tataagataa tg






#cgtcgaat    480













tgaggccgag gaactttgcc ttgatacatc tgaaatcata attacaagta cc






#aggcaaga    540













aatagaacag caatggggat tatatgatgg ttttgatcta actatggccc gg






#aaactcag    600













agcaaggaat aaggcgtggt gtgagctgct ttggtcgtta catgccccgt at






#gattgcaa    660













tccctcctgg catggagttt agtcatatag caccacatga tgttgacctc ga






#cagtgagg    720













aaggaaatgg agatggctca ggttcaccag atccacctat ttgggctgat at






#aatgcgct    780













tcttctcaaa cccccggaag ccaatgattc ttgctcttgc tcgtccggat cc






#gaagaaga    840













atatcactac tctagtcaaa gcatttggtg aacatcgtga actgagaaat tt






#agcaaatc    900













ttacactgat caatggggaa accgtgatgg tcattgatga aatgtcaagc ac






#aaatgcag    960













ctgttttgac ttcagcactc aagttaattg ataaatatga tctatatgga ca






#agtggcat   1020













accccaagca ccataagcaa tctgaagttc ctgatattta tcgtttarct gc






#gagaacaa   1080













aaggagtttt tatcaattgg gcattgggtt gaaccaattg gactcaactt ga






#ttgaggct   1140













gctgcatatg gtctacccat ggttgccaac ccgaaatggt ggggcctgtg ga






#caatacat   1200













ccgggttctt ggataatggg aaattcctgg gttgaccccc acaatcaaaa tg






#aaatagct   1260













gaggcacttt ataagcttgt gtcagataag cacttgtggt cacaatgtcg cc






#agaatggt   1320













ctgaaaaaca tccataaatt ttcatggcct gaacattgcc agaactattt gg






#cacgtgta   1380













gtcactctca agcctagaca tccccgctgg caaaagaatg atgntgcagc tg






#aaatatct   1440













gaagcagatt cacccgagga ctctttgang gatattcatg acatatcact ta






#acttaaag   1500













ctttncttgg acagnggaaa atcaggcagc aaagaaggga attcaaatgc tt






#ttgagaan   1560













gcattttgag gatgcagcgc aaaagttgca aggtggtaat gacatcaaaa a 






#           1611




















<210> SEQ ID NO 8






<211> LENGTH: 365






<212> TYPE: PRT






<213> ORGANISM: Zea mays






<220> FEATURE:






<221> NAME/KEY: UNSURE






<222> LOCATION: (5)






<221> NAME/KEY: UNSURE






<222> LOCATION: (205)






<221> NAME/KEY: UNSURE






<222> LOCATION: (356)













<400> SEQUENCE: 8













Gly Val Tyr Arg Xaa Asp Leu Leu Thr Arg Gl






#n Ile Ser Ala Pro Asp






  1               5 






#                 10 






#                 15













Val Asp Trp Ser Tyr Gly Glu Pro Thr Glu Me






#t Leu Ser Pro Ile Ser






             20     






#             25     






#             30













Ser Glu Asn Phe Gly Leu Glu Leu Gly Glu Se






#r Ser Gly Ala Tyr Ile






         35         






#         40         






#         45













Val Arg Ile Pro Phe Gly Pro Arg Asp Lys Ty






#r Ile Pro Lys Glu His






     50             






#     55             






#     60













Leu Trp Pro His Ile Gln Glu Phe Val Asp Gl






#y Ala Leu Val His Ile






 65                 






# 70                 






# 75                 






# 80













Met Gln Met Ser Lys Val Leu Gly Glu Gln Il






#e Gly Ser Gly Gln Pro






                 85 






#                 90 






#                 95













Val Trp Pro Val Val Ile His Gly His Tyr Al






#a Asp Ala Gly Asp Ser






            100      






#           105      






#           110













Ala Ala Leu Leu Ser Gly Ala Leu Asn Val Pr






#o Met Val Phe Thr Gly






        115          






#       120          






#       125













His Ser Leu Gly Arg Asp Lys Leu Asp Gln Il






#e Leu Lys Gln Gly Arg






    130              






#   135              






#   140













Gln Thr Arg Asp Glu Ile Asn Ala Thr Tyr Ly






#s Ile Met Arg Arg Ile






145                 1






#50                 1






#55                 1






#60













Glu Ala Glu Glu Leu Cys Leu Asp Thr Ser Gl






#u Ile Ile Ile Thr Ser






                165  






#               170  






#               175













Thr Arg Gln Glu Ile Glu Gln Gln Trp Gly Le






#u Tyr Asp Gly Phe Asp






            180      






#           185      






#           190













Leu Thr Met Ala Arg Lys Leu Arg Ala Arg As






#n Lys Xaa Gly Val Ser






        195          






#       200          






#       205













Cys Phe Gly Arg Tyr Met Pro Arg Met Ile Al






#a Ile Pro Pro Gly Met






    210              






#   215              






#   220













Glu Phe Ser His Ile Ala Pro His Asp Val As






#p Leu Asp Ser Glu Glu






225                 2






#30                 2






#35                 2






#40













Gly Asn Gly Asp Gly Ser Gly Ser Pro Asp Pr






#o Pro Ile Trp Ala Asp






                245  






#               250  






#               255













Ile Met Arg Phe Phe Ser Asn Pro Arg Lys Pr






#o Met Ile Leu Ala Leu






            260      






#           265      






#           270













Ala Arg Pro Asp Pro Lys Lys Asn Ile Thr Th






#r Leu Val Lys Ala Phe






        275          






#       280          






#       285













Gly Glu His Arg Glu Leu Arg Asn Leu Ala As






#n Leu Thr Leu Ile Asn






    290              






#   295              






#   300













Gly Glu Thr Val Met Val Ile Asp Glu Met Se






#r Ser Thr Asn Ala Ala






305                 3






#10                 3






#15                 3






#20













Val Leu Thr Ser Ala Leu Lys Leu Ile Asp Ly






#s Tyr Asp Leu Tyr Gly






                325  






#               330  






#               335













Gln Val Ala Tyr Pro Lys His His Lys Gln Se






#r Glu Val Pro Asp Ile






            340      






#           345      






#           350













Tyr Arg Leu Xaa Ala Arg Thr Lys Gly Val Ph






#e Ile Asn






        355          






#       360          






#       365




















<210> SEQ ID NO 9






<211> LENGTH: 661






<212> TYPE: DNA






<213> ORGANISM: Oryza sativa













<400> SEQUENCE: 9













gcacgaggaa gtgaagagct tctcaagcaa gggagacaga caagggagca aa






#taaacatg     60













acatacaaaa taatgtgtag aattgaggca gaggagttgg ctcttgatgc at






#ctgaaata    120













gttatagcaa gcactaggca agagatagaa gagcaatgga atttgtatga cg






#gttttgag    180













gtcatacttg caaggaaact ccgtgcaaga gtcaagcgtg gtgctaactg ct






#atggtcgc    240













tatatgcctc gtatggttat cattccccca ggtgttgaat ttggccatat ga






#ttcatgac    300













ttcgatatag gatggtgaag aagaaaatcc atgtccagcc tctgaggacc ca






#cccatttg    360













gtctcagata atgcgcttct ttacaaatcc taggaagcct atgattctgg ct






#gttgctcg    420













tccatatcct gaaaagaata ttacatcact tgtaaaggca tttggtgaat gt






#cgccctct    480













aagggagcta gcaaatctga cactgataat gggtaaccgt gaggccattt ct






#aagatgaa    540













caacatgagt gctgctgtct tgacctcagt gcttacattg attgatgaat at






#gacttgta    600













tggtcaagtg gcttatccca agcatcataa gcactctgaa gttccagctt ct






#caagcaag    660













g                  






#                  






#                  






#              661




















<210> SEQ ID NO 10






<211> LENGTH: 210






<212> TYPE: PRT






<213> ORGANISM: Oryza sativa






<220> FEATURE:






<221> NAME/KEY: UNSURE






<222> LOCATION: (100)













<400> SEQUENCE: 10













Glu Glu Leu Leu Lys Gln Gly Arg Gln Thr Ar






#g Glu Gln Ile Asn Met






  1               5 






#                 10 






#                 15













Thr Tyr Lys Ile Met Cys Arg Ile Glu Ala Gl






#u Glu Leu Ala Leu Asp






             20     






#             25     






#             30













Ala Ser Glu Ile Val Ile Ala Ser Thr Arg Gl






#n Glu Ile Glu Glu Gln






         35         






#         40         






#         45













Trp Asn Leu Tyr Asp Gly Phe Glu Val Ile Le






#u Ala Arg Lys Leu Arg






     50             






#     55             






#     60













Ala Arg Val Lys Arg Gly Ala Asn Cys Tyr Gl






#y Arg Tyr Met Pro Arg






 65                 






# 70                 






# 75                 






# 80













Met Val Ile Ile Pro Pro Gly Val Glu Phe Gl






#y His Met Ile His Asp






                 85 






#                 90 






#                 95













Phe Asp Ile Xaa Asp Gly Glu Glu Glu Asn Pr






#o Cys Pro Ala Ser Glu






            100      






#           105      






#           110













Asp Pro Pro Ile Trp Ser Gln Ile Met Arg Ph






#e Phe Thr Asn Pro Arg






        115          






#       120          






#       125













Lys Pro Met Ile Leu Ala Val Ala Arg Pro Ty






#r Pro Glu Lys Asn Ile






    130              






#   135              






#   140













Thr Ser Leu Val Lys Ala Phe Gly Glu Cys Ar






#g Pro Leu Arg Glu Leu






145                 1






#50                 1






#55                 1






#60













Ala Asn Leu Thr Leu Ile Met Gly Asn Arg Gl






#u Ala Ile Ser Lys Met






                165  






#               170  






#               175













Asn Asn Met Ser Ala Ala Val Leu Thr Ser Va






#l Leu Thr Leu Ile Asp






            180      






#           185      






#           190













Glu Tyr Asp Leu Tyr Gly Gln Val Ala Tyr Pr






#o Lys His His Lys His






        195          






#       200          






#       205













Ser Glu






    210




















<210> SEQ ID NO 11






<211> LENGTH: 546






<212> TYPE: DNA






<213> ORGANISM: Oryza sativa






<220> FEATURE:






<221> NAME/KEY: unsure






<222> LOCATION: (451)






<221> NAME/KEY: unsure






<222> LOCATION: (484)






<221> NAME/KEY: unsure






<222> LOCATION: (523)






<221> NAME/KEY: unsure






<222> LOCATION: (539)













<400> SEQUENCE: 11













cttacacctt gttgatccac atgatcagaa tgccattgca gatgcactgt at






#aagcttct     60













ttctgacaaa caactttggt cgagatgtag agagaatggg ctaaaaaata tt






#caccagtt    120













ctcatggcct gaacattgca agaattactt gtcaaggata ttgacacttg gt






#ccgagatc    180













acctgctatt ggtggcaaac aggaacagaa ggcacccata tcaggaagga ag






#catatcat    240













tgttatatct gtagactctg ttaacaagga agatctagtc cggataatca ga






#aacactat    300













tgaagtcaca cgcacagaaa aaatgtctgg ttcaactggg ttttgtgctg tc






#aacttcac    360













ttacaatatc aggagatacg cctcgctggc taagtgtctg caaggcatgt tt






#gcctactg    420













gttttttgga tgccttcaac ctgcaataag nggggaagtt aatatcctaa ta






#accctttg    480













gtantcccgg gaagatacgc caaagcaagt tcccaaggtt acnccctggc aa






#taagatnt    540













aaaatt                 






#                  






#                  






#          546




















<210> SEQ ID NO 12






<211> LENGTH: 112






<212> TYPE: PRT






<213> ORGANISM: Oryza sativa













<400> SEQUENCE: 12













Leu Val Asp Pro His Asp Gln Asn Ala Ile Al






#a Asp Ala Leu Tyr Lys






  1               5 






#                 10 






#                 15













Leu Leu Ser Asp Lys Gln Leu Trp Ser Arg Cy






#s Arg Glu Asn Gly Leu






             20     






#             25     






#             30













Lys Asn Ile His Gln Phe Ser Trp Pro Glu Hi






#s Cys Lys Asn Tyr Leu






         35         






#         40         






#         45













Ser Arg Ile Leu Thr Leu Gly Pro Arg Ser Pr






#o Ala Ile Gly Gly Lys






     50             






#     55             






#     60













Gln Glu Gln Lys Ala Pro Ile Ser Gly Arg Ly






#s His Ile Ile Val Ile






 65                 






# 70                 






# 75                 






# 80













Ser Val Asp Ser Val Asn Lys Glu Asp Leu Va






#l Arg Ile Ile Arg Asn






                 85 






#                 90 






#                 95













Thr Ile Glu Val Thr Arg Thr Glu Lys Met Se






#r Gly Ser Thr Gly Phe






            100      






#           105      






#           110




















<210> SEQ ID NO 13






<211> LENGTH: 601






<212> TYPE: DNA






<213> ORGANISM: Oryza sativa






<220> FEATURE:






<221> NAME/KEY: unsure






<222> LOCATION: (308)






<221> NAME/KEY: unsure






<222> LOCATION: (393)






<221> NAME/KEY: unsure






<222> LOCATION: (463)






<221> NAME/KEY: unsure






<222> LOCATION: (467)






<221> NAME/KEY: unsure






<222> LOCATION: (484)






<221> NAME/KEY: unsure






<222> LOCATION: (498)






<221> NAME/KEY: unsure






<222> LOCATION: (504)






<221> NAME/KEY: unsure






<222> LOCATION: (506)






<221> NAME/KEY: unsure






<222> LOCATION: (582)






<221> NAME/KEY: unsure






<222> LOCATION: (587)






<221> NAME/KEY: unsure






<222> LOCATION: (593)






<221> NAME/KEY: unsure






<222> LOCATION: (600)













<400> SEQUENCE: 13













cttacatgta agctcgtgcc gaattcggca cgagcttaca ctttgtattc gg






#gagatacg     60













ccaagcagtt cccaggttac tcctgcaata gatcaaaatc accaagcaca ta






#ttgagtat    120













cgatggggag gagaaggcct aagaaagtat ctagtgaaat gggctacttc ag






#tggtagaa    180













agaaagggaa gaatcgaaag acaaattatt tttgaagacc ctgaacactc tt






#caacctat    240













tgtcttgcat ttagagtggt caatccaaat catctacccc ctttaaagga gt






#tgaggaaa    300













ttgatganaa tccaatcact ccgttgcaat gccttgtata accacagtgc ca






#ccagactc    360













tctgtagttc ccattcacgc atcacgttcc agncactaag tacttgtgta ta






#cctgggga    420













atagactgca aatgttgcat cctgttggta aagtggcatc ggntatnaga cg






#ctagtggc    480













tcanagacgt catctaangg cgantnactc ccgcaacaat catacgtcag ga






#atacgtac    540













agagctccct gacactaata cattgcatga ggtaatcaat anagagnact cg






#ncaattgn    600













g                  






#                  






#                  






#              601




















<210> SEQ ID NO 14






<211> LENGTH: 118






<212> TYPE: PRT






<213> ORGANISM: Oryza sativa






<220> FEATURE:






<221> NAME/KEY: UNSURE






<222> LOCATION: (91)













<400> SEQUENCE: 14













Tyr Thr Leu Tyr Ser Gly Asp Thr Pro Ser Se






#r Ser Gln Val Thr Pro






  1               5 






#                 10 






#                 15













Ala Ile Asp Gln Asn His Gln Ala His Ile Gl






#u Tyr Arg Trp Gly Gly






             20     






#             25     






#             30













Glu Gly Leu Arg Lys Tyr Leu Val Lys Trp Al






#a Thr Ser Val Val Glu






         35         






#         40         






#         45













Arg Lys Gly Arg Ile Glu Arg Gln Ile Ile Ph






#e Glu Asp Pro Glu His






     50             






#     55             






#     60













Ser Ser Thr Tyr Cys Leu Ala Phe Arg Val Va






#l Asn Pro Asn His Leu






 65                 






# 70                 






# 75                 






# 80













Pro Pro Leu Lys Glu Leu Arg Lys Leu Met Xa






#a Ile Gln Ser Leu Arg






                 85 






#                 90 






#                 95













Cys Asn Ala Leu Tyr Asn His Ser Ala Thr Ar






#g Leu Ser Val Val Pro






            100      






#           105      






#           110













Ile His Ala Ser Arg Ser






        115




















<210> SEQ ID NO 15






<211> LENGTH: 3524






<212> TYPE: DNA






<213> ORGANISM: Glycine max













<400> SEQUENCE: 15













gcacgaggaa agtatttccg atgacataaa cttgtttgaa ttctccttgg ca






#gcagcaag     60













aagcagagta taaatggcag gaaacgattg gctgaacagc taccttgaag ct






#atacttga    120













cgtgggtcct ggcctggacg atgccaagtc ctctcttctt ctccgagaga ga






#ggcaggtt    180













cagccctact cgctacttcg tccaagaggt tattggcttc gatgagaccg at






#ctctatcg    240













ctcttgggtt cgggcttcct ccaccaggag tcctcaggag aggaacacca gg






#ctcgagaa    300













catgtgctgg cggatttgga acctcgctcg ccaaaagaag cagctggaga gt






#gagactgc    360













gctgagagtc aacaagcgtc gtttggagcg cgagcggggt cgcagggaag cc






#accgctga    420













tatgtcggag gacttgtcgg aaggagagaa gggcgatccc ttgagtgact tg






#tccgctca    480













cggcggcgtc ggcgacttca accgatccag gttgcccaga atcagttccg ct






#gatgccat    540













ggagacttgg gccaacagtc agaaagggaa gaagctctac attgtgctca tc






#agcattca    600













tggcctaata cgaggcgaga atatggagct gggacgtgat tctgacacgg gt






#ggtcaggt    660













taagtacgtt gtggaacttg caagggcatt gggatcaatg ccaggagttt at






#cgggttga    720













tttgctaact agacaagtgt cggcgccaga tgtagattgg agttatgggg ag






#ccgacgga    780













aatgttgtct ccaagagaca cagatgattt tggagatgac actggagaaa gc






#agtggttc    840













ttatatcgtt cgtattccct ttggtccaag agataaatat attccaaaag aa






#cttctctg    900













gccttacatt cctgaatttg ttgatggagc gcttaaccac attatacaga tg






#tccaagtc    960













tcttggggaa cagattggca gtgggcatgc tgtctggcct gttgccatcc ac






#ggacatta   1020













tgcagatgca ggtgactctg ctgctcttct gtctggcgca ttaaatgttc ca






#atgctttt   1080













tactggccac tcacttggcc gagataagtt ggaacaactt ttaaagcaag gt






#agactatc   1140













aaaggatgaa ataaacacaa cttacaagat tatgcgtagg attgaagctg ag






#gaattggc   1200













ccttgatggt tctgaaatag tcatcacaag cactagacag gaaatagaag aa






#caatggcg   1260













cttgtatgat ggttttgatc ctgtattgga gcgtaaacta cgagcaagga tc






#aggcgtaa   1320













tgtgagctgc tatgggagat tcatgcctcg catggcgaca attccacctg gt






#atggagtt   1380













ccatcatatt gttccacacg atggtgatat agaaggtgaa ccagaaggaa at






#ttggatca   1440













tcctgccccc caagatccac ctatttggtc tgagataatg cgcttcttta cc






#aaccctcg   1500













caagcctatg atacttgctc tcgctagacc agaccctaaa aagaacatca ca






#actttggt   1560













aaaagcattt ggagaatgcc gtcctcttca agagcttgcc aaccttacat ta






#attatggg   1620













taaccgagat ggaattgatg agatgtcaag cacaaatgct tctgttcttc tc






#tcggtact   1680













taagttgatt gacaagtatg atctgtatgg gcaagtggca tatcctaaac at






#cacaaaca   1740













atatgatgtt cctgacatat atcgcctagc agcaaagaca aagggtgttt tc






#attaatcc   1800













agctttcatt gagccatttg gtcttacctt aattgaggca gctgctcatg gt






#ttgccaat   1860













tgttgatact aaaaatggag gtcctgttga tattcatagg gtacttgaca at






#ggtctgct   1920













cgtagatccc catgatcagc agtctattgc tgatgctctt ttgaagcttg tt






#agcaacaa   1980













acaactttgg gcaaaatgta gacagaatgg gttaaagaat attcatttat tt






#tcatggcc   2040













cgagcactgt aagacttacc tttctaaaat agccacttgc aagccaaggc at






#ccacaatg   2100













gcagcgaagt gaggatggag gtgaaagttc agaatcagat tcaccaggtg at






#tccttgag   2160













agatttacag gacttgtctc taaatctgaa gttttcatta gatggagaga ag






#agtgaggg   2220













tagtggaaat gacaattctt tgaattctga tggaaatgct gctgatagag gg






#gcaaaatt   2280













agagaatgct gttttgtcat ggtcaaaggg catctctaag gacacacgca gg






#ggtggggc   2340













tacagaaaaa tccgatcaga atccaaatgc tggtaaattt cctccattaa gg






#agaagaaa   2400













acatctgttt gtcattgctg tggattgtga taccacttca agccttcttg aa






#actattaa   2460













agccatcttt gagtctgctg gaaaggatag ggcagagagc attgtaggtt tc






#atattgtc   2520













aacatcatta acaatatcag agatacagtc atttctaatc tcaggtggct tg






#agtcccat   2580













tgattttgat gcttatattt gcaatagtgg cagtgatcta tactatccat cc






#ctcaatcc   2640













cggagatcgc ccatttgtgg ttgacttgta ttaccactca cacattgaat ac






#cgttgggg   2700













tggagaaggg ttgaggaaga ctttagtgcg atgggctgat tcaatcactg at






#aagaaggg   2760













tgataatgac gaacaaattg tgagtcctgc tgaacagctt tctactgact ac






#tgttatgc   2820













tttcaaagtg cgaaagccag gaatggctcc ccctgtgaag gagcttcgca ag






#ttattacg   2880













gatccaagct ctgcgttgcc atccgatata ttgtcaaaat gggacaagac tg






#aatgtcat   2940













tccagtgctg gcatctcgtt cccaagccct cagataccta tatgttcgat gg






#ggttttga   3000













actgtcaaag atggtggtgt tcgttggaga atgcggtgac acagattacg aa






#ggacttct   3060













tggtggccta cacaaaagtg tcatactgaa gggagtggga agcagtgcaa tc






#agtcaact   3120













ccataataac agaagctacc ctctttcaga tgtcacgcca ttggacagcc cc






#aacatcgt   3180













cgaggcaact gaggggagta gcggtgctga tatccaggct ttgatcgaaa aa






#gtgggata   3240













tctcaatgga tgaaaaaatt tgaaagtcat ttctagttat atgcctctta gt






#gtgtgtct   3300













gctatgaaac ctacttctga gcaagcagat atctgaattt tatccacaat gt






#tcataaag   3360













cttttttcct cctctcttct ctgtaacttc tatatcattc tcttcctcac aa






#acttcccc   3420













atgaaacata tttcctcttg tttccccact tatctccttg ttggttctgt at






#ctacatat   3480













tacattttta atgaaggcca cttctcaaaa aaaaaaaaaa aaaa   






#                 352






#4




















<210> SEQ ID NO 16






<211> LENGTH: 1059






<212> TYPE: PRT






<213> ORGANISM: Glycine max













<400> SEQUENCE: 16













Met Ala Gly Asn Asp Trp Leu Asn Ser Tyr Le






#u Glu Ala Ile Leu Asp






  1               5 






#                 10 






#                 15













Val Gly Pro Gly Leu Asp Asp Ala Lys Ser Se






#r Leu Leu Leu Arg Glu






             20     






#             25     






#             30













Arg Gly Arg Phe Ser Pro Thr Arg Tyr Phe Va






#l Gln Glu Val Ile Gly






         35         






#         40         






#         45













Phe Asp Glu Thr Asp Leu Tyr Arg Ser Trp Va






#l Arg Ala Ser Ser Thr






     50             






#     55             






#     60













Arg Ser Pro Gln Glu Arg Asn Thr Arg Leu Gl






#u Asn Met Cys Trp Arg






 65                 






# 70                 






# 75                 






# 80













Ile Trp Asn Leu Ala Arg Gln Lys Lys Gln Le






#u Glu Ser Glu Thr Ala






                 85 






#                 90 






#                 95













Leu Arg Val Asn Lys Arg Arg Leu Glu Arg Gl






#u Arg Gly Arg Arg Glu






            100      






#           105      






#           110













Ala Thr Ala Asp Met Ser Glu Asp Leu Ser Gl






#u Gly Glu Lys Gly Asp






        115          






#       120          






#       125













Pro Leu Ser Asp Leu Ser Ala His Gly Gly Va






#l Gly Asp Phe Asn Arg






    130              






#   135              






#   140













Ser Arg Leu Pro Arg Ile Ser Ser Ala Asp Al






#a Met Glu Thr Trp Ala






145                 1






#50                 1






#55                 1






#60













Asn Ser Gln Lys Gly Lys Lys Leu Tyr Ile Va






#l Leu Ile Ser Ile His






                165  






#               170  






#               175













Gly Leu Ile Arg Gly Glu Asn Met Glu Leu Gl






#y Arg Asp Ser Asp Thr






            180      






#           185      






#           190













Gly Gly Gln Val Lys Tyr Val Val Glu Leu Al






#a Arg Ala Leu Gly Ser






        195          






#       200          






#       205













Met Pro Gly Val Tyr Arg Val Asp Leu Leu Th






#r Arg Gln Val Ser Ala






    210              






#   215              






#   220













Pro Asp Val Asp Trp Ser Tyr Gly Glu Pro Th






#r Glu Met Leu Ser Pro






225                 2






#30                 2






#35                 2






#40













Arg Asp Thr Asp Asp Phe Gly Asp Asp Thr Gl






#y Glu Ser Ser Gly Ser






                245  






#               250  






#               255













Tyr Ile Val Arg Ile Pro Phe Gly Pro Arg As






#p Lys Tyr Ile Pro Lys






            260      






#           265      






#           270













Glu Leu Leu Trp Pro Tyr Ile Pro Glu Phe Va






#l Asp Gly Ala Leu Asn






        275          






#       280          






#       285













His Ile Ile Gln Met Ser Lys Ser Leu Gly Gl






#u Gln Ile Gly Ser Gly






    290              






#   295              






#   300













His Ala Val Trp Pro Val Ala Ile His Gly Hi






#s Tyr Ala Asp Ala Gly






305                 3






#10                 3






#15                 3






#20













Asp Ser Ala Ala Leu Leu Ser Gly Ala Leu As






#n Val Pro Met Leu Phe






                325  






#               330  






#               335













Thr Gly His Ser Leu Gly Arg Asp Lys Leu Gl






#u Gln Leu Leu Lys Gln






            340      






#           345      






#           350













Gly Arg Leu Ser Lys Asp Glu Ile Asn Thr Th






#r Tyr Lys Ile Met Arg






        355          






#       360          






#       365













Arg Ile Glu Ala Glu Glu Leu Ala Leu Asp Gl






#y Ser Glu Ile Val Ile






    370              






#   375              






#   380













Thr Ser Thr Arg Gln Glu Ile Glu Glu Gln Tr






#p Arg Leu Tyr Asp Gly






385                 3






#90                 3






#95                 4






#00













Phe Asp Pro Val Leu Glu Arg Lys Leu Arg Al






#a Arg Ile Arg Arg Asn






                405  






#               410  






#               415













Val Ser Cys Tyr Gly Arg Phe Met Pro Arg Me






#t Ala Thr Ile Pro Pro






            420      






#           425      






#           430













Gly Met Glu Phe His His Ile Val Pro His As






#p Gly Asp Ile Glu Gly






        435          






#       440          






#       445













Glu Pro Glu Gly Asn Leu Asp His Pro Ala Pr






#o Gln Asp Pro Pro Ile






    450              






#   455              






#   460













Trp Ser Glu Ile Met Arg Phe Phe Thr Asn Pr






#o Arg Lys Pro Met Ile






465                 4






#70                 4






#75                 4






#80













Leu Ala Leu Ala Arg Pro Asp Pro Lys Lys As






#n Ile Thr Thr Leu Val






                485  






#               490  






#               495













Lys Ala Phe Gly Glu Cys Arg Pro Leu Gln Gl






#u Leu Ala Asn Leu Thr






            500      






#           505      






#           510













Leu Ile Met Gly Asn Arg Asp Gly Ile Asp Gl






#u Met Ser Ser Thr Asn






        515          






#       520          






#       525













Ala Ser Val Leu Leu Ser Val Leu Lys Leu Il






#e Asp Lys Tyr Asp Leu






    530              






#   535              






#   540













Tyr Gly Gln Val Ala Tyr Pro Lys His His Ly






#s Gln Tyr Asp Val Pro






545                 5






#50                 5






#55                 5






#60













Asp Ile Tyr Arg Leu Ala Ala Lys Thr Lys Gl






#y Val Phe Ile Asn Pro






                565  






#               570  






#               575













Ala Phe Ile Glu Pro Phe Gly Leu Thr Leu Il






#e Glu Ala Ala Ala His






            580      






#           585      






#           590













Gly Leu Pro Ile Val Asp Thr Lys Asn Gly Gl






#y Pro Val Asp Ile His






        595          






#       600          






#       605













Arg Val Leu Asp Asn Gly Leu Leu Val Asp Pr






#o His Asp Gln Gln Ser






    610              






#   615              






#   620













Ile Ala Asp Ala Leu Leu Lys Leu Val Ser As






#n Lys Gln Leu Trp Ala






625                 6






#30                 6






#35                 6






#40













Lys Cys Arg Gln Asn Gly Leu Lys Asn Ile Hi






#s Leu Phe Ser Trp Pro






                645  






#               650  






#               655













Glu His Cys Lys Thr Tyr Leu Ser Lys Ile Al






#a Thr Cys Lys Pro Arg






            660      






#           665      






#           670













His Pro Gln Trp Gln Arg Ser Glu Asp Gly Gl






#y Glu Ser Ser Glu Ser






        675          






#       680          






#       685













Asp Ser Pro Gly Asp Ser Leu Arg Asp Leu Gl






#n Asp Leu Ser Leu Asn






    690              






#   695              






#   700













Leu Lys Phe Ser Leu Asp Gly Glu Lys Ser Gl






#u Gly Ser Gly Asn Asp






705                 7






#10                 7






#15                 7






#20













Asn Ser Leu Asn Ser Asp Gly Asn Ala Ala As






#p Arg Gly Ala Lys Leu






                725  






#               730  






#               735













Glu Asn Ala Val Leu Ser Trp Ser Lys Gly Il






#e Ser Lys Asp Thr Arg






            740      






#           745      






#           750













Arg Gly Gly Ala Thr Glu Lys Ser Asp Gln As






#n Pro Asn Ala Gly Lys






        755          






#       760          






#       765













Phe Pro Pro Leu Arg Arg Arg Lys His Leu Ph






#e Val Ile Ala Val Asp






    770              






#   775              






#   780













Cys Asp Thr Thr Ser Ser Leu Leu Glu Thr Il






#e Lys Ala Ile Phe Glu






785                 7






#90                 7






#95                 8






#00













Ser Ala Gly Lys Asp Arg Ala Glu Ser Ile Va






#l Gly Phe Ile Leu Ser






                805  






#               810  






#               815













Thr Ser Leu Thr Ile Ser Glu Ile Gln Ser Ph






#e Leu Ile Ser Gly Gly






            820      






#           825      






#           830













Leu Ser Pro Ile Asp Phe Asp Ala Tyr Ile Cy






#s Asn Ser Gly Ser Asp






        835          






#       840          






#       845













Leu Tyr Tyr Pro Ser Leu Asn Pro Gly Asp Ar






#g Pro Phe Val Val Asp






    850              






#   855              






#   860













Leu Tyr Tyr His Ser His Ile Glu Tyr Arg Tr






#p Gly Gly Glu Gly Leu






865                 8






#70                 8






#75                 8






#80













Arg Lys Thr Leu Val Arg Trp Ala Asp Ser Il






#e Thr Asp Lys Lys Gly






                885  






#               890  






#               895













Asp Asn Asp Glu Gln Ile Val Ser Pro Ala Gl






#u Gln Leu Ser Thr Asp






            900      






#           905      






#           910













Tyr Cys Tyr Ala Phe Lys Val Arg Lys Pro Gl






#y Met Ala Pro Pro Val






        915          






#       920          






#       925













Lys Glu Leu Arg Lys Leu Leu Arg Ile Gln Al






#a Leu Arg Cys His Pro






    930              






#   935              






#   940













Ile Tyr Cys Gln Asn Gly Thr Arg Leu Asn Va






#l Ile Pro Val Leu Ala






945                 9






#50                 9






#55                 9






#60













Ser Arg Ser Gln Ala Leu Arg Tyr Leu Tyr Va






#l Arg Trp Gly Phe Glu






                965  






#               970  






#               975













Leu Ser Lys Met Val Val Phe Val Gly Glu Cy






#s Gly Asp Thr Asp Tyr






            980      






#           985      






#           990













Glu Gly Leu Leu Gly Gly Leu His Lys Ser Va






#l Ile Leu Lys Gly Val






        995          






#      1000           






#     1005













Gly Ser Ser Ala Ile Ser Gln Leu His Asn As






#n Arg Ser Tyr Pro Leu






   1010              






#  1015               






# 1020













Ser Asp Val Thr Pro Leu Asp Ser Pro Asn Il






#e Val Glu Ala Thr Glu






1025               1030 






#               1035  






#              1040













Gly Ser Ser Gly Ala Asp Ile Gln Ala Leu Il






#e Glu Lys Val Gly Tyr






               1045  






#              1050   






#             1055













Leu Asn Gly




















<210> SEQ ID NO 17






<211> LENGTH: 646






<212> TYPE: DNA






<213> ORGANISM: Glycine max






<220> FEATURE:






<221> NAME/KEY: unsure






<222> LOCATION: (355)






<221> NAME/KEY: unsure






<222> LOCATION: (397)






<221> NAME/KEY: unsure






<222> LOCATION: (412)






<221> NAME/KEY: unsure






<222> LOCATION: (539)






<221> NAME/KEY: unsure






<222> LOCATION: (552)






<221> NAME/KEY: unsure






<222> LOCATION: (560)






<221> NAME/KEY: unsure






<222> LOCATION: (594)






<221> NAME/KEY: unsure






<222> LOCATION: (598)






<221> NAME/KEY: unsure






<222> LOCATION: (613)






<221> NAME/KEY: unsure






<222> LOCATION: (631)






<221> NAME/KEY: unsure






<222> LOCATION: (633)













<400> SEQUENCE: 17













aaacagtaga gttcctaaca tcaggcaatg ttcaagtgaa tgagtttgat gc






#tttaattt     60













gcagtagtgg aagtcaagtt tactaccctg gcatcaatac agaagaagga aa






#gcttttgc    120













ctgatccaga ttatgaggta catattgact atcgttgggg gtgtgaaggt ct






#taagaaaa    180













ccatttggaa acttatgaat ggtgatgaga acagccccat tgaggaagat ct






#caaatcca    240













gcaatgcaca ttgcatctca tacaaaataa aggatcttag taaggcaaaa aa






#agttgatg    300













agttgaggca gaagcttagg atgagaggtc tacgttgtca tcctatgtac tg






#canggggt    360













catctagaat gcatgtgatt cctcctcttg catctanagc ccaagcactc an






#gtatccct    420













tgtacgttgg aggttgaacg ttgcaaacat gtactcaccc ttggagaaac gg






#ggacacgg    480













attatgagga gatgattctg gaacccacaa gaccataatc atgaaggaat gg






#ttctaang    540













gtcaaaagag tnctaagagn ccaggaacta caaagagatg tattgcccaa tg






#anaccncc    600













tgtgcatcat tcnaacacca tgaaacatgc nancttgaca attcaa   






#                646




















<210> SEQ ID NO 18






<211> LENGTH: 136






<212> TYPE: PRT






<213> ORGANISM: Glycine max






<220> FEATURE:






<221> NAME/KEY: UNSURE






<222> LOCATION: (116)






<221> NAME/KEY: UNSURE






<222> LOCATION: (130)






<221> NAME/KEY: UNSURE






<222> LOCATION: (135)













<400> SEQUENCE: 18













Glu Phe Leu Thr Ser Gly Asn Val Gln Val As






#n Glu Phe Asp Ala Leu






  1               5 






#                 10 






#                 15













Ile Cys Ser Ser Gly Ser Gln Val Tyr Tyr Pr






#o Gly Ile Asn Thr Glu






             20     






#             25     






#             30













Glu Gly Lys Leu Leu Pro Asp Pro Asp Tyr Gl






#u Val His Ile Asp Tyr






         35         






#         40         






#         45













Arg Trp Gly Cys Glu Gly Leu Lys Lys Thr Il






#e Trp Lys Leu Met Asn






     50             






#     55             






#     60













Gly Asp Glu Asn Ser Pro Ile Glu Glu Asp Le






#u Lys Ser Ser Asn Ala






 65                 






# 70                 






# 75                 






# 80













His Cys Ile Ser Tyr Lys Ile Lys Asp Leu Se






#r Lys Ala Lys Lys Val






                 85 






#                 90 






#                 95













Asp Glu Leu Arg Gln Lys Leu Arg Met Arg Gl






#y Leu Arg Cys His Pro






            100      






#           105      






#           110













Met Tyr Cys Xaa Gly Ser Ser Arg Met His Va






#l Ile Pro Pro Leu Ala






        115          






#       120          






#       125













Ser Xaa Ala Gln Ala Leu Xaa Tyr






    130              






#   135




















<210> SEQ ID NO 19






<211> LENGTH: 1445






<212> TYPE: DNA






<213> ORGANISM: Triticum aestivum













<400> SEQUENCE: 19













gcatcacaaa cactcagaag ttcttgatat ttatcgttta gcagcgagaa cg






#aagggtgc     60













ttttgtaaat gtagcttact ttgaacaatt cggtgttacc ttgatagagg ct






#gccatgca    120













tggtttacct gtaattgcaa caaaaaatgg agctcctgtt gaaattcatc ag






#gtgctcaa    180













caatggtctc cttgtcgatc cacatgatca gaatgccatt gcagatgcac tg






#tataaact    240













tctttccgag aagcaacttt ggtcaaggtg cagagaaaat ggactaaaaa at






#attcacca    300













attttcctgg cctgaacatt gcaagaatca cctgtcaagg atattgactc tt






#ggcatgag    360













atctcctgct gtcggtagcg aagaggaaag gagtaaggca cctatatcag ga






#aggaagca    420













tatcattgtt atttctgtag actctgttaa caaggagaat ctagtgcgga tc






#atcagaaa    480













tgcgattgag gccgcacata cagaaaacac accggcttca actggtttcg tg






#ctgtcaac    540













ttcgctaaca atatcagaga tatgttcact gctagtatct gtaggcatgc at






#cctgctgg    600













ttttgatgct ttcatctgca acagtgggag tagcatttac tatccttcat at






#tctggtaa    660













tacgccaagc aattccaagg ttacccatgt aatagatcga aatcatcaat ca






#catattga    720













gtatcgttgg ggaggagaag gtctaagaaa gtatcttgtg aaatgggcta ct






#tcagtggt    780













tgaaagaaag ggaagaattg aaaggcaaat gatttttgaa gattcagaac ac






#tcttctac    840













atattgtctt gcatttaaag tggtgattcc gattacgaag agctgctagg gg






#gtctccac    900













aggaccataa tcctgaaggg cgacttcaac attgctgcaa acagaatcca ca






#cagtccgg    960













agatacccct tgcaggatgt cgttgcactg gacagctcca acatcatcga ag






#tccagggt   1020













tgcactacag aggacatcaa gtctgccctg cgtcagattg gtgtgccgac ac






#aataacat   1080













ctttgcgcgc accacacgaa aaggaagaag aaaaggagag gaagaacgag cc






#aaaccgag   1140













cgccactatt tccatacctg atgggaatgt cgattttgtt tgtagattgt ag






#agtgtggg   1200













tgtggtatat tctcgagctg tgaataactt ccaccttttg tttgtactat tc






#acaaattt   1260













tgaagtggac aatatcgata aatgtagtgg gaaaacaaat gtgagcagaa aa






#gtcatttg   1320













ggaactgaga tgccccgaaa atacagacaa ggcgggagcc taaatggatt aa






#ctctgtct   1380













actcgtttta ctggcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa






#aaaaaaaa   1440













aaaaa                 






#                  






#                  






#          1445




















<210> SEQ ID NO 20






<211> LENGTH: 358






<212> TYPE: PRT






<213> ORGANISM: Triticum aestivum






<220> FEATURE:






<221> NAME/KEY: UNSURE






<222> LOCATION: (286)













<400> SEQUENCE: 20













His His Lys His Ser Glu Val Leu Asp Ile Ty






#r Arg Leu Ala Ala Arg






  1               5 






#                 10 






#                 15













Thr Lys Gly Ala Phe Val Asn Val Ala Tyr Ph






#e Glu Gln Phe Gly Val






             20     






#             25     






#             30













Thr Leu Ile Glu Ala Ala Met His Gly Leu Pr






#o Val Ile Ala Thr Lys






         35         






#         40         






#         45













Asn Gly Ala Pro Val Glu Ile His Gln Val Le






#u Asn Asn Gly Leu Leu






     50             






#     55             






#     60













Val Asp Pro His Asp Gln Asn Ala Ile Ala As






#p Ala Leu Tyr Lys Leu






 65                 






# 70                 






# 75                 






# 80













Leu Ser Glu Lys Gln Leu Trp Ser Arg Cys Ar






#g Glu Asn Gly Leu Lys






                 85 






#                 90 






#                 95













Asn Ile His Gln Phe Ser Trp Pro Glu His Cy






#s Lys Asn His Leu Ser






            100      






#           105      






#           110













Arg Ile Leu Thr Leu Gly Met Arg Ser Pro Al






#a Val Gly Ser Glu Glu






        115          






#       120          






#       125













Glu Arg Ser Lys Ala Pro Ile Ser Gly Arg Ly






#s His Ile Ile Val Ile






    130              






#   135              






#   140













Ser Val Asp Ser Val Asn Lys Glu Asn Leu Va






#l Arg Ile Ile Arg Asn






145                 1






#50                 1






#55                 1






#60













Ala Ile Glu Ala Ala His Thr Glu Asn Thr Pr






#o Ala Ser Thr Gly Phe






                165  






#               170  






#               175













Val Leu Ser Thr Ser Leu Thr Ile Ser Glu Il






#e Cys Ser Leu Leu Val






            180      






#           185      






#           190













Ser Val Gly Met His Pro Ala Gly Phe Asp Al






#a Phe Ile Cys Asn Ser






        195          






#       200          






#       205













Gly Ser Ser Ile Tyr Tyr Pro Ser Tyr Ser Gl






#y Asn Thr Pro Ser Asn






    210              






#   215              






#   220













Ser Lys Val Thr His Val Ile Asp Arg Asn Hi






#s Gln Ser His Ile Glu






225                 2






#30                 2






#35                 2






#40













Tyr Arg Trp Gly Gly Glu Gly Leu Arg Lys Ty






#r Leu Val Lys Trp Ala






                245  






#               250  






#               255













Thr Ser Val Val Glu Arg Lys Gly Arg Ile Gl






#u Arg Gln Met Ile Phe






            260      






#           265      






#           270













Glu Asp Ser Glu His Ser Ser Thr Tyr Cys Le






#u Ala Phe Xaa Ser Gly






        275          






#       280          






#       285













Asp Ser Asp Tyr Glu Glu Leu Leu Gly Gly Le






#u His Arg Thr Ile Ile






    290              






#   295              






#   300













Leu Lys Gly Asp Phe Asn Ile Ala Ala Asn Ar






#g Ile His Thr Val Arg






305                 3






#10                 3






#15                 3






#20













Arg Tyr Pro Leu Gln Asp Val Val Ala Leu As






#p Ser Ser Asn Ile Ile






                325  






#               330  






#               335













Glu Val Gln Gly Cys Thr Thr Glu Asp Ile Ly






#s Ser Ala Leu Arg Gln






            340      






#           345      






#           350













Ile Gly Val Pro Thr Gln






        355




















<210> SEQ ID NO 21






<211> LENGTH: 1660






<212> TYPE: DNA






<213> ORGANISM: Triticum aestivum






<220> FEATURE:






<221> NAME/KEY: unsure






<222> LOCATION: (1323)






<221> NAME/KEY: unsure






<222> LOCATION: (1339)






<221> NAME/KEY: unsure






<222> LOCATION: (1393)






<221> NAME/KEY: unsure






<222> LOCATION: (1418)






<221> NAME/KEY: unsure






<222> LOCATION: (1453)






<221> NAME/KEY: unsure






<222> LOCATION: (1523)






<221> NAME/KEY: unsure






<222> LOCATION: (1530)






<221> NAME/KEY: unsure






<222> LOCATION: (1541)






<221> NAME/KEY: unsure






<222> LOCATION: (1560)






<221> NAME/KEY: unsure






<222> LOCATION: (1576)






<221> NAME/KEY: unsure






<222> LOCATION: (1579)






<221> NAME/KEY: unsure






<222> LOCATION: (1592)






<221> NAME/KEY: unsure






<222> LOCATION: (1599)






<221> NAME/KEY: unsure






<222> LOCATION: (1603)






<221> NAME/KEY: unsure






<222> LOCATION: (1614)






<221> NAME/KEY: unsure






<222> LOCATION: (1621)






<221> NAME/KEY: unsure






<222> LOCATION: (1631)













<400> SEQUENCE: 21













gcacgagccg ctgcttatgg tctgcccgtg gtggcaacca agaacggcgg gc






#cggtggac     60













atcctcaagg cgcttcacaa cggcctgctg gtggacccgc actccgccga gg






#cgatcacc    120













ggcgcgctgc tcagcctgct ggccgacaag gggcagtggc tggagagccg ac






#gcaacggc    180













ctgcgcaaca tccaccgctt ctcgtggccg caccactgcc gcctctacct ct






#cccacgtc    240













gccgcctact gcgaccaccc gtcgccgcac cagcggctcc gcgtccctgg cg






#tcccgtct    300













gcctcggcga gcatgggcgg tgacgactcc ctctcggact cactccgtgg cc






#tctcgctc    360













caaatctccg tggacgcctc caacgacctc aatgccgggg actcggccgc gc






#tgatcatg    420













gacgccctac gccgccgccc ggcggccgac aggcgcgagg gctccggcag gg






#cgttgggc    480













ttcgcgccgg gaaggaggca gaggctcctt gtcgtcgccg tcgactgcta cg






#gcgatgac    540













ggcaagcccg acgtcgagca actgaagaaa gccatcgacg cggcgatgtc cg






#ccagtgac    600













ggcgcgggag ggcggcaggg gtacgtgctc tcgaccggca tgaccatccc cg






#agaccgcg    660













gagacgctca aggcctgcgg cgccgacccg gccggcttcg acgcgctcat tt






#gcagcagc    720













ggcgcggaga tatgctaccc gtggaaggag ctgacggccg acgaggagta ct






#ccggccac    780













gtggcgttcc ggtggcccgg cgaccacgtg aaaaccgtcg tgccgaggct cg






#ggaaggcc    840













gacgacgcgc aggcgtccga cctcgccgtc gacgtgtccg ctggctccgt gc






#actgccac    900













gcctacgccg ccaccgacgc gtccaaggtg aagaaggtgg attcgatcag gc






#aggcgctg    960













cggatgcgcg ggttccggtg caacctcgtc tacacgcgcg cgtgcacgcg cc






#tcaacgtc   1020













atccctctct ccgcttcccg cccacgcgcg ttgaggtacc tgtcgataca gt






#ggggcatc   1080













gatctcgcca aggtggcggt gctcgtcggc gagaccggag acaccgaccg cg






#agaagctc   1140













ctgccggggc tgcacaagac gataactcct gccggggatg ctctcccaac gg






#cagcgaag   1200













cacctcgacc ccgacgagga cgagtacccc acccaggacg tcgtgcccat ga






#ctcaccca   1260













aacatcatca caatcggccg aagcccagcc tggcttttct aatttgacgc gg






#ccgagaaa   1320













cantccgtac ggccgtacnc actgtaatcc tgggcaggaa gatgactgcc ag






#aaaagtat   1380













aataaatttt aangatgtgc aaccatgaca acatgggnta aatttttagt ct






#aacatctc   1440













ccttcctgag gcnttgtcat atatatcact tataatgaac caagaaagaa tg






#catgtgaa   1500













aaaacgatac aaactaactc tcncttaaan ctttggttaa natttgagat tc






#tcacgtgn   1560













tcgtgactcg gtaaangant cggaaatttc cnattgacnc agnacccccg cc






#anccccct   1620













ngccccggtg nctaaaaggg ggaatttggg cccgaatccg     






#                  






#  1660




















<210> SEQ ID NO 22






<211> LENGTH: 433






<212> TYPE: PRT






<213> ORGANISM: Triticum aestivum













<400> SEQUENCE: 22













Ala Arg Ala Ala Ala Tyr Gly Leu Pro Val Va






#l Ala Thr Lys Asn Gly






  1               5 






#                 10 






#                 15













Gly Pro Val Asp Ile Leu Lys Ala Leu His As






#n Gly Leu Leu Val Asp






             20     






#             25     






#             30













Pro His Ser Ala Glu Ala Ile Thr Gly Ala Le






#u Leu Ser Leu Leu Ala






         35         






#         40         






#         45













Asp Lys Gly Gln Trp Leu Glu Ser Arg Arg As






#n Gly Leu Arg Asn Ile






     50             






#     55             






#     60













His Arg Phe Ser Trp Pro His His Cys Arg Le






#u Tyr Leu Ser His Val






 65                 






# 70                 






# 75                 






# 80













Ala Ala Tyr Cys Asp His Pro Ser Pro His Gl






#n Arg Leu Arg Val Pro






                 85 






#                 90 






#                 95













Gly Val Pro Ser Ala Ser Ala Ser Met Gly Gl






#y Asp Asp Ser Leu Ser






            100      






#           105      






#           110













Asp Ser Leu Arg Gly Leu Ser Leu Gln Ile Se






#r Val Asp Ala Ser Asn






        115          






#       120          






#       125













Asp Leu Asn Ala Gly Asp Ser Ala Ala Leu Il






#e Met Asp Ala Leu Arg






    130              






#   135              






#   140













Arg Arg Pro Ala Ala Asp Arg Arg Glu Gly Se






#r Gly Arg Ala Leu Gly






145                 1






#50                 1






#55                 1






#60













Phe Ala Pro Gly Arg Arg Gln Arg Leu Leu Va






#l Val Ala Val Asp Cys






                165  






#               170  






#               175













Tyr Gly Asp Asp Gly Lys Pro Asp Val Glu Gl






#n Leu Lys Lys Ala Ile






            180      






#           185      






#           190













Asp Ala Ala Met Ser Ala Ser Asp Gly Ala Gl






#y Gly Arg Gln Gly Tyr






        195          






#       200          






#       205













Val Leu Ser Thr Gly Met Thr Ile Pro Glu Th






#r Ala Glu Thr Leu Lys






    210              






#   215              






#   220













Ala Cys Gly Ala Asp Pro Ala Gly Phe Asp Al






#a Leu Ile Cys Ser Ser






225                 2






#30                 2






#35                 2






#40













Gly Ala Glu Ile Cys Tyr Pro Trp Lys Glu Le






#u Thr Ala Asp Glu Glu






                245  






#               250  






#               255













Tyr Ser Gly His Val Ala Phe Arg Trp Pro Gl






#y Asp His Val Lys Thr






            260      






#           265      






#           270













Val Val Pro Arg Leu Gly Lys Ala Asp Asp Al






#a Gln Ala Ser Asp Leu






        275          






#       280          






#       285













Ala Val Asp Val Ser Ala Gly Ser Val His Cy






#s His Ala Tyr Ala Ala






    290              






#   295              






#   300













Thr Asp Ala Ser Lys Val Lys Lys Val Asp Se






#r Ile Arg Gln Ala Leu






305                 3






#10                 3






#15                 3






#20













Arg Met Arg Gly Phe Arg Cys Asn Leu Val Ty






#r Thr Arg Ala Cys Thr






                325  






#               330  






#               335













Arg Leu Asn Val Ile Pro Leu Ser Ala Ser Ar






#g Pro Arg Ala Leu Arg






            340      






#           345      






#           350













Tyr Leu Ser Ile Gln Trp Gly Ile Asp Leu Al






#a Lys Val Ala Val Leu






        355          






#       360          






#       365













Val Gly Glu Thr Gly Asp Thr Asp Arg Glu Ly






#s Leu Leu Pro Gly Leu






    370              






#   375              






#   380













His Lys Thr Ile Thr Pro Ala Gly Asp Ala Le






#u Pro Thr Ala Ala Lys






385                 3






#90                 3






#95                 4






#00













His Leu Asp Pro Asp Glu Asp Glu Tyr Pro Th






#r Gln Asp Val Val Pro






                405  






#               410  






#               415













Met Thr His Pro Asn Ile Ile Thr Ile Gly Ar






#g Ser Pro Ala Trp Leu






            420      






#           425      






#           430













Phe




















<210> SEQ ID NO 23






<211> LENGTH: 3623






<212> TYPE: DNA






<213> ORGANISM: Zea mays













<400> SEQUENCE: 23













ttcggcacga gcagaaacct ccaggatccg actccaatcg aatcgccaaa gc






#agacaggg     60













gcgctcgcgg gggcgccgag ctcgacgggg cgagatggcc gggaacgact gg






#atcaacag    120













ctacctggag gctattctgg acgctggcgg ggccgcggga gatctctcgg ca






#gccgcagg    180













cagcggggac ggccgcgacg ggacggccgt ggagaagcgg gataagtcgt cg






#ctgatgct    240













ccgagagcgc ggccggttca gccccgcgcg atacttcgtc gaggaggtca tc






#tccggctt    300













cgacgagacc gacctctaca agacctgggt ccgcacctcg gctatgagga gt






#ccccagga    360













gcggaacacg cggctggaga acatgtcgtg gaggatctgg aacctcgcca gg






#aagaagaa    420













gcagatagaa ggagaggaag cctcacgatt gtctaaacaa cgcatggaat tt






#gagaaagc    480













tcgtcaatat gctgctgatt tgtctgaaga cctatctgaa ggagaaaagg ga






#gaaacaaa    540













taatgaacca tctattcatg atgagagcat gaggacgcgg atgccaagga tt






#ggttcaac    600













tgatgctatt gatacatggg caaaccagca caaagataaa aagttgtaca ta






#gtattgat    660













aagcattcat ggtcttatac gcggggagaa tatggagctg ggacgtgatt ca






#gatacagt    720













gaaatatgtt gtagaacttg ctagggcttt aggttcaaca ccaggagtat ac






#agagtgga    780













tctactaaca aggcagattt ctgcacctga tgttgattgg agttatgggg aa






#cctactga    840













gatgctcagt ccaataagtt cagaaaactt tgggcttgag ctgggcgaaa gc






#agtggtgc    900













ctatattgtc cggataccat tcggaccaag agacaaatat atccctaaag ag






#catctatg    960













gcctcacatc caggaatttg ttgatggcgc acttgtccat atcatgcaga tg






#tccaaggt   1020













ccttggagaa caaattggta gtgggcaacc agtatggcct gttgttatac at






#ggacacta   1080













tgctgatgct ggtgattctg ctgctttact gtctggggca ctcaatgtac cc






#atggtatt   1140













cactggtcat tctcttggca gagataagtt ggaccagatt ttgaagcaag gg






#cgtcaaac   1200













cagggatgaa ataaatgcaa cctataagat aatgcgtcga attgaggccg ag






#gaactttg   1260













ccttgataca tctgaaatca taattacaag taccaggcaa gaaatagaac ag






#caatgggg   1320













attatatgat ggttttgatc taactatggc ccggaaactc agagcaagaa ta






#aggcgtgg   1380













tgtgagctgc tttggtcgtt acatgccccg tatgattgca atccctcctg gc






#atggagtt   1440













tagtcatata gcaccacatg atgttgacct cgacagtgag gaaggaaatg ga






#gatggctc   1500













aggttcacca gatccaccta tttgggctga tataatgcgc ttcttctcaa ac






#ccccggaa   1560













gccaatgatt cttgctcttg ctcgtccgga tccgaagaag aatatcacta ct






#ctagtcaa   1620













agcatttggt gaacatcgtg aactgagaaa tttagcaaat cttacactga tc






#atggggaa   1680













tcgtgatgtc attgatgaaa tgtcaagcac aaatgcagct gttttgactt ca






#gcactcaa   1740













gttaattgat aaatatgatc tatatggaca agtggcatac cccaagcacc at






#aagcaatc   1800













tgaagttcct gatatttatc gtttagctgc gagaacaaaa ggagttttta tc






#aattgtgc   1860













attggttgaa ccatttggac tcaccttgat tgaggctgct gcatatggtc ta






#cccatggt   1920













tgccacccga aatggtgggc ctgtggacat acatcgggtt cttgataatg ga






#attcttgt   1980













tgacccccac aatcaaaatg aaatagctga ggcactttat aagcttgtgt ca






#gataagca   2040













cttgtggtca caatgtcgcc agaatggtct gaaaaacatc cataaatttt ca






#tggcctga   2100













acattgccag aactatttgg cacgtgtagt cactctcaag cctagacatc cc






#cgctggca   2160













aaagaatgat gttgcagctg aaatatctga agcagattca cccgaggact ct






#ctgaggga   2220













tattcatgac atatcactta acttaaagct ttccttggac agtgaaaaat ca






#ggcagcaa   2280













agaagggaat tcaaatgctt tgagaaggca ttttgaggat gcagcgcaaa ag






#ttgtcagg   2340













tgttaatgac atcaaaaagg atgtgccagg tgagaatggt aagtggtcgt ca






#ttgcgtag   2400













gaggaagcac atcattgtaa ttgctgtaga ctctgtgcaa gatgcagact tt






#gttcaggt   2460













tattaaaaat atttttgaag cttcaagaaa tgagagatca agtggtgctg tt






#ggttttgt   2520













gttgtcaacg gctagagcaa tatcagagtt acatactttg cttatatctg ga






#gggataga   2580













agctagtgac tttgatgcct tcatatgcaa cagtggcagt gatctttgtt at






#ccatcttc   2640













aagctctgag gacatgctta accctgctga gctcccattc atgattgatc tt






#gattatca   2700













ctcccaaatt gaatatcgct ggggaggaga aggtttaagg aagacattaa tt






#cgttgggc   2760













agctgagaaa aacaaagaaa gtggacaaaa aatatttatt gaggatgaag aa






#tgctcatc   2820













cacctactgc atttcattta aagtgtccaa tactgcagct gcacctcctg tg






#aaggagat   2880













taggaggaca atgagaatac aagcactgcg ttgccatgtt ttgtacagcc at






#gatggtag   2940













caagttgaat gtaattcctg ttttggcttc tcgctcacag gctttaaggt at






#ttgtatat   3000













ccgatggggg gtagagctgt caaacatcac cgtgattgtc ggtgagtgtg gt






#gacacaga   3060













ttatgaagga ctacttggag gcgtgcacaa aactatcata ctcaaaggct cg






#ttcaatac   3120













tgctccaaac caagttcatg ctaacagaag ctattcatcc caagatgttg ta






#tcctttga   3180













caaacaagga attgcttcaa ttgagggata tggtccagac aatctaaagt ca






#gctctacg   3240













gcaatttggt atattgaaag actaaatctt tgatctttgc tggtcagcag ag






#gaatcaaa   3300













gcaggaatgt aggatcgagg agagtgacag gacttcccct ctgtgcactt cg






#ccgaaaag   3360













taataatggg attgctatgc atggcccttg ttgtacattg gaaaattggg ca






#cgcaaact   3420













tgtgtcagtt ttcccgtttt tgggaaattc attgatggtg tttttgtaac ta






#taccaacc   3480













tgtgtcagtt ttgccgttgt tgcaaaactc agtgatggtg ttttttgtaa tt






#attataca   3540













tccgaataat aagactggtg tttcccgtca caaaaaaaaa aaaaaaaaaa aa






#aaaaaaaa   3600













aaaaaaaaaa aaaaaaaaaa aaa           






#                  






#              3623




















<210> SEQ ID NO 24






<211> LENGTH: 1087






<212> TYPE: PRT






<213> ORGANISM: Zea mays













<400> SEQUENCE: 24













Ser Ala Arg Ala Glu Thr Ser Arg Ile Arg Le






#u Gln Ser Asn Arg Gln






  1               5 






#                 10 






#                 15













Ser Arg Gln Gly Arg Ser Arg Gly Arg Arg Al






#a Arg Arg Gly Glu Met






             20     






#             25     






#             30













Ala Gly Asn Asp Trp Ile Asn Ser Tyr Leu Gl






#u Ala Ile Leu Asp Ala






         35         






#         40         






#         45













Gly Gly Ala Ala Gly Asp Leu Ser Ala Ala Al






#a Gly Ser Gly Asp Gly






     50             






#     55             






#     60













Arg Asp Gly Thr Ala Val Glu Lys Arg Asp Ly






#s Ser Ser Leu Met Leu






 65                 






# 70                 






# 75                 






# 80













Arg Glu Arg Gly Arg Phe Ser Pro Ala Arg Ty






#r Phe Val Glu Glu Val






                 85 






#                 90 






#                 95













Ile Ser Gly Phe Asp Glu Thr Asp Leu Tyr Ly






#s Thr Trp Val Arg Thr






            100      






#           105      






#           110













Ser Ala Met Arg Ser Pro Gln Glu Arg Asn Th






#r Arg Leu Glu Asn Met






        115          






#       120          






#       125













Ser Trp Arg Ile Trp Asn Leu Ala Arg Lys Ly






#s Lys Gln Ile Glu Gly






    130              






#   135              






#   140













Glu Glu Ala Ser Arg Leu Ser Lys Gln Arg Me






#t Glu Phe Glu Lys Ala






145                 1






#50                 1






#55                 1






#60













Arg Gln Tyr Ala Ala Asp Leu Ser Glu Asp Le






#u Ser Glu Gly Glu Lys






                165  






#               170  






#               175













Gly Glu Thr Asn Asn Glu Pro Ser Ile His As






#p Glu Ser Met Arg Thr






            180      






#           185      






#           190













Arg Met Pro Arg Ile Gly Ser Thr Asp Ala Il






#e Asp Thr Trp Ala Asn






        195          






#       200          






#       205













Gln His Lys Asp Lys Lys Leu Tyr Ile Val Le






#u Ile Ser Ile His Gly






    210              






#   215              






#   220













Leu Ile Arg Gly Glu Asn Met Glu Leu Gly Ar






#g Asp Ser Asp Thr Val






225                 2






#30                 2






#35                 2






#40













Lys Tyr Val Val Glu Leu Ala Arg Ala Leu Gl






#y Ser Thr Pro Gly Val






                245  






#               250  






#               255













Tyr Arg Val Asp Leu Leu Thr Arg Gln Ile Se






#r Ala Pro Asp Val Asp






            260      






#           265      






#           270













Trp Ser Tyr Gly Glu Pro Thr Glu Met Leu Se






#r Pro Ile Ser Ser Glu






        275          






#       280          






#       285













Asn Phe Gly Leu Glu Leu Gly Glu Ser Ser Gl






#y Ala Tyr Ile Val Arg






    290              






#   295              






#   300













Ile Pro Phe Gly Pro Arg Asp Lys Tyr Ile Pr






#o Lys Glu His Leu Trp






305                 3






#10                 3






#15                 3






#20













Pro His Ile Gln Glu Phe Val Asp Gly Ala Le






#u Val His Ile Met Gln






                325  






#               330  






#               335













Met Ser Lys Val Leu Gly Glu Gln Ile Gly Se






#r Gly Gln Pro Val Trp






            340      






#           345      






#           350













Pro Val Val Ile His Gly His Tyr Ala Asp Al






#a Gly Asp Ser Ala Ala






        355          






#       360          






#       365













Leu Leu Ser Gly Ala Leu Asn Val Pro Met Va






#l Phe Thr Gly His Ser






    370              






#   375              






#   380













Leu Gly Arg Asp Lys Leu Asp Gln Ile Leu Ly






#s Gln Gly Arg Gln Thr






385                 3






#90                 3






#95                 4






#00













Arg Asp Glu Ile Asn Ala Thr Tyr Lys Ile Me






#t Arg Arg Ile Glu Ala






                405  






#               410  






#               415













Glu Glu Leu Cys Leu Asp Thr Ser Glu Ile Il






#e Ile Thr Ser Thr Arg






            420      






#           425      






#           430













Gln Glu Ile Glu Gln Gln Trp Gly Leu Tyr As






#p Gly Phe Asp Leu Thr






        435          






#       440          






#       445













Met Ala Arg Lys Leu Arg Ala Arg Ile Arg Ar






#g Gly Val Ser Cys Phe






    450              






#   455              






#   460













Gly Arg Tyr Met Pro Arg Met Ile Ala Ile Pr






#o Pro Gly Met Glu Phe






465                 4






#70                 4






#75                 4






#80













Ser His Ile Ala Pro His Asp Val Asp Leu As






#p Ser Glu Glu Gly Asn






                485  






#               490  






#               495













Gly Asp Gly Ser Gly Ser Pro Asp Pro Pro Il






#e Trp Ala Asp Ile Met






            500      






#           505      






#           510













Arg Phe Phe Ser Asn Pro Arg Lys Pro Met Il






#e Leu Ala Leu Ala Arg






        515          






#       520          






#       525













Pro Asp Pro Lys Lys Asn Ile Thr Thr Leu Va






#l Lys Ala Phe Gly Glu






    530              






#   535              






#   540













His Arg Glu Leu Arg Asn Leu Ala Asn Leu Th






#r Leu Ile Met Gly Asn






545                 5






#50                 5






#55                 5






#60













Arg Asp Val Ile Asp Glu Met Ser Ser Thr As






#n Ala Ala Val Leu Thr






                565  






#               570  






#               575













Ser Ala Leu Lys Leu Ile Asp Lys Tyr Asp Le






#u Tyr Gly Gln Val Ala






            580      






#           585      






#           590













Tyr Pro Lys His His Lys Gln Ser Glu Val Pr






#o Asp Ile Tyr Arg Leu






        595          






#       600          






#       605













Ala Ala Arg Thr Lys Gly Val Phe Ile Asn Cy






#s Ala Leu Val Glu Pro






    610              






#   615              






#   620













Phe Gly Leu Thr Leu Ile Glu Ala Ala Ala Ty






#r Gly Leu Pro Met Val






625                 6






#30                 6






#35                 6






#40













Ala Thr Arg Asn Gly Gly Pro Val Asp Ile Hi






#s Arg Val Leu Asp Asn






                645  






#               650  






#               655













Gly Ile Leu Val Asp Pro His Asn Gln Asn Gl






#u Ile Ala Glu Ala Leu






            660      






#           665      






#           670













Tyr Lys Leu Val Ser Asp Lys His Leu Trp Se






#r Gln Cys Arg Gln Asn






        675          






#       680          






#       685













Gly Leu Lys Asn Ile His Lys Phe Ser Trp Pr






#o Glu His Cys Gln Asn






    690              






#   695              






#   700













Tyr Leu Ala Arg Val Val Thr Leu Lys Pro Ar






#g His Pro Arg Trp Gln






705                 7






#10                 7






#15                 7






#20













Lys Asn Asp Val Ala Ala Glu Ile Ser Glu Al






#a Asp Ser Pro Glu Asp






                725  






#               730  






#               735













Ser Leu Arg Asp Ile His Asp Ile Ser Leu As






#n Leu Lys Leu Ser Leu






            740      






#           745      






#           750













Asp Ser Glu Lys Ser Gly Ser Lys Glu Gly As






#n Ser Asn Ala Leu Arg






        755          






#       760          






#       765













Arg His Phe Glu Asp Ala Ala Gln Lys Leu Se






#r Gly Val Asn Asp Ile






    770              






#   775              






#   780













Lys Lys Asp Val Pro Gly Glu Asn Gly Lys Tr






#p Ser Ser Leu Arg Arg






785                 7






#90                 7






#95                 8






#00













Arg Lys His Ile Ile Val Ile Ala Val Asp Se






#r Val Gln Asp Ala Asp






                805  






#               810  






#               815













Phe Val Gln Val Ile Lys Asn Ile Phe Glu Al






#a Ser Arg Asn Glu Arg






            820      






#           825      






#           830













Ser Ser Gly Ala Val Gly Phe Val Leu Ser Th






#r Ala Arg Ala Ile Ser






        835          






#       840          






#       845













Glu Leu His Thr Leu Leu Ile Ser Gly Gly Il






#e Glu Ala Ser Asp Phe






    850              






#   855              






#   860













Asp Ala Phe Ile Cys Asn Ser Gly Ser Asp Le






#u Cys Tyr Pro Ser Ser






865                 8






#70                 8






#75                 8






#80













Ser Ser Glu Asp Met Leu Asn Pro Ala Glu Le






#u Pro Phe Met Ile Asp






                885  






#               890  






#               895













Leu Asp Tyr His Ser Gln Ile Glu Tyr Arg Tr






#p Gly Gly Glu Gly Leu






            900      






#           905      






#           910













Arg Lys Thr Leu Ile Arg Trp Ala Ala Glu Ly






#s Asn Lys Glu Ser Gly






        915          






#       920          






#       925













Gln Lys Ile Phe Ile Glu Asp Glu Glu Cys Se






#r Ser Thr Tyr Cys Ile






    930              






#   935              






#   940













Ser Phe Lys Val Ser Asn Thr Ala Ala Ala Pr






#o Pro Val Lys Glu Ile






945                 9






#50                 9






#55                 9






#60













Arg Arg Thr Met Arg Ile Gln Ala Leu Arg Cy






#s His Val Leu Tyr Ser






                965  






#               970  






#               975













His Asp Gly Ser Lys Leu Asn Val Ile Pro Va






#l Leu Ala Ser Arg Ser






            980      






#           985      






#           990













Gln Ala Leu Arg Tyr Leu Tyr Ile Arg Trp Gl






#y Val Glu Leu Ser Asn






        995          






#      1000           






#     1005













Ile Thr Val Ile Val Gly Glu Cys Gly Asp Th






#r Asp Tyr Glu Gly Leu






   1010              






#  1015               






# 1020













Leu Gly Gly Val His Lys Thr Ile Ile Leu Ly






#s Gly Ser Phe Asn Thr






1025               1030 






#               1035  






#              1040













Ala Pro Asn Gln Val His Ala Asn Arg Ser Ty






#r Ser Ser Gln Asp Val






               1045  






#              1050   






#             1055













Val Ser Phe Asp Lys Gln Gly Ile Ala Ser Il






#e Glu Gly Tyr Gly Pro






           1060      






#          1065       






#         1070













Asp Asn Leu Lys Ser Ala Leu Arg Gln Phe Gl






#y Ile Leu Lys Asp






       1075          






#      1080           






#     1085




















<210> SEQ ID NO 25






<211> LENGTH: 2455






<212> TYPE: DNA






<213> ORGANISM: Oryza sativa













<400> SEQUENCE: 25













gcacgaggaa gtgaagagct tctcaagcaa gggagacaga caagggagca aa






#taaacatg     60













acatacaaaa taatgtgtag aattgaggca gaggagttgg ctcttgatgc at






#ctgaaata    120













gttatagcaa gcactaggca agagatagaa gagcaatgga atttgtatga cg






#gttttgag    180













gtcatacttg caaggaaact ccgtgcaaga gtcaagcgtg gtgctaactg ct






#atggtcgc    240













tatatgcctc gtatggttat cattccccca ggtgttgaat ttggccatat ga






#ttcatgac    300













ttcgatatgg atggtgagga agacggtcca tccccagcct ctgaagatcc at






#ctatttgg    360













tccgagataa tgcggttctt tacaaaccct aggaaaccta tgattctggc ag






#ttgctcgc    420













ccttatcctg aaaagaatat tactactctt gtgaaggcgt ttggtgagtg cc






#gaccactg    480













agggagcttg ctaatctaac attgataatg ggaaaccgtg aggctatttc ca






#agatgcat    540













aatatgagtg cagctgtttt gacatcagta cttacattga ttgatgaata tg






#atttgtat    600













ggtcaagtgg catacccaaa gcgtcacaaa cactcggaag ttcctgatat tt






#accgttta    660













gcagtgagaa caaagggtgc ttttgtaaat gtgccttact ttgaacagtt cg






#gtgtcacc    720













ttgatagagg ctgccatgca tggtttgcct gtaattgcaa caaaaaatgg ag






#ctcctgtt    780













gaaattcacc aggtgctgga caatggtctc cttgttgatc cccatgatca gc






#atgcaatt    840













gcagatgcac tctataaact cctttctgaa aaacaacttt ggtcaaaatg cc






#gagagaat    900













gggctgaaaa atatacatca gttttcttgg cctgaacatt gcaagaatta ct






#tgtcaagg    960













atatcaactc ttggcccaag gcatcctgct tttgcaagca atgaagaccg ga






#ttaaggca   1020













cctattaagg gaaggaagca tgtcactgtt attgctgtag attctgtcag ta






#aggaagat   1080













ctgattcgca ttgtcagaaa ttctatcgag gctgcacgta aagaaaattt gt






#caggatcg   1140













acaggttttg tgttgtcaac ttccctgaca ataggggaga tacattctct at






#taatgtct   1200













gctggcatgc ttcctactgg attcgatgct ttcatatgca atagtggaag tg






#atttgtat   1260













tatccttcat gtactggtga tacaccaagc aactcccgtg ttacatttgc at






#tagatcgt   1320













agttaccaat cacatataga gtatcattgg ggaggagaag gtttaaggaa at






#atctagtg   1380













aagtgggctt cttccgtggt agaaagaaga gggaggattg aaaaacaagt ta






#tcttcgaa   1440













gatccagagc actcttcaac atactgtctt gcatttaaag tggtcaatcc aa






#atcattta   1500













cctcctttaa aggagctgca aaagttgatg agaattcagt cactccgttg tc






#acgctctg   1560













tataaccatg gtgctaccag actatctgta attccaatcc acgcatcacg gt






#ctaaggct   1620













ctaaggtact tatctgttcg ctggggcata gagttgcaaa atgtggtggt tc






#ttgttggt   1680













gaaactggtg attcagatta cgaagaattg tttggaggtc ttcataagac gg






#tcatcctt   1740













aagggtgaat tcaacacatc tgcaaataga atccattctg ttaggcggta tc






#ctttacaa   1800













gatgttgttg cacttgatag cccaaacatc attggaattg agggttatgg ca






#ctgatgac   1860













atgaggtctg ctctgaaaca actggatata cgggcacagt gacaccaagc cc






#ccatctgt   1920













ttatcattaa tatatgaaga aaaccagtgg acgatacaaa gacagcaaac aa






#acactagc   1980













atttccatac ttgatggaga tgccgatttt gccatgtaag tcatgtagtt ta






#tgtgtgtg   2040













gtccttgagc tgtgaatagc attccgaaat ctcatcccat tgagattttg gt






#atgtggca   2100













attttggagt aaaaatcgat tccatccagg aatacggaca aaagaaattg gt






#tacaatgt   2160













tgataatgaa aaacatgtta aggaagcatt aattcagcaa gaaaagcttc ca






#aaatcact   2220













acaattcttg gccaagcttg caatttccct ttttttgaag tggaagctta tg






#ttgtgtgt   2280













ttactgctgg gtggaccata tggccctggc agcccttctt tactatgttt ac






#tccaggag   2340













ggctgcctag ctttcgtgta agtattgttt gacacgatgg ttcattctat at






#atccaaag   2400













ttttgttgag atcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa






#aaa        2455




















<210> SEQ ID NO 26






<211> LENGTH: 633






<212> TYPE: PRT






<213> ORGANISM: Oryza sativa













<400> SEQUENCE: 26













Ala Arg Gly Ser Glu Glu Leu Leu Lys Gln Gl






#y Arg Gln Thr Arg Glu






  1               5 






#                 10 






#                 15













Gln Ile Asn Met Thr Tyr Lys Ile Met Cys Ar






#g Ile Glu Ala Glu Glu






             20     






#             25     






#             30













Leu Ala Leu Asp Ala Ser Glu Ile Val Ile Al






#a Ser Thr Arg Gln Glu






         35         






#         40         






#         45













Ile Glu Glu Gln Trp Asn Leu Tyr Asp Gly Ph






#e Glu Val Ile Leu Ala






     50             






#     55             






#     60













Arg Lys Leu Arg Ala Arg Val Lys Arg Gly Al






#a Asn Cys Tyr Gly Arg






 65                 






# 70                 






# 75                 






# 80













Tyr Met Pro Arg Met Val Ile Ile Pro Pro Gl






#y Val Glu Phe Gly His






                 85 






#                 90 






#                 95













Met Ile His Asp Phe Asp Met Asp Gly Glu Gl






#u Asp Gly Pro Ser Pro






            100      






#           105      






#           110













Ala Ser Glu Asp Pro Ser Ile Trp Ser Glu Il






#e Met Arg Phe Phe Thr






        115          






#       120          






#       125













Asn Pro Arg Lys Pro Met Ile Leu Ala Val Al






#a Arg Pro Tyr Pro Glu






    130              






#   135              






#   140













Lys Asn Ile Thr Thr Leu Val Lys Ala Phe Gl






#y Glu Cys Arg Pro Leu






145                 1






#50                 1






#55                 1






#60













Arg Glu Leu Ala Asn Leu Thr Leu Ile Met Gl






#y Asn Arg Glu Ala Ile






                165  






#               170  






#               175













Ser Lys Met His Asn Met Ser Ala Ala Val Le






#u Thr Ser Val Leu Thr






            180      






#           185      






#           190













Leu Ile Asp Glu Tyr Asp Leu Tyr Gly Gln Va






#l Ala Tyr Pro Lys Arg






        195          






#       200          






#       205













His Lys His Ser Glu Val Pro Asp Ile Tyr Ar






#g Leu Ala Val Arg Thr






    210              






#   215              






#   220













Lys Gly Ala Phe Val Asn Val Pro Tyr Phe Gl






#u Gln Phe Gly Val Thr






225                 2






#30                 2






#35                 2






#40













Leu Ile Glu Ala Ala Met His Gly Leu Pro Va






#l Ile Ala Thr Lys Asn






                245  






#               250  






#               255













Gly Ala Pro Val Glu Ile His Gln Val Leu As






#p Asn Gly Leu Leu Val






            260      






#           265      






#           270













Asp Pro His Asp Gln His Ala Ile Ala Asp Al






#a Leu Tyr Lys Leu Leu






        275          






#       280          






#       285













Ser Glu Lys Gln Leu Trp Ser Lys Cys Arg Gl






#u Asn Gly Leu Lys Asn






    290              






#   295              






#   300













Ile His Gln Phe Ser Trp Pro Glu His Cys Ly






#s Asn Tyr Leu Ser Arg






305                 3






#10                 3






#15                 3






#20













Ile Ser Thr Leu Gly Pro Arg His Pro Ala Ph






#e Ala Ser Asn Glu Asp






                325  






#               330  






#               335













Arg Ile Lys Ala Pro Ile Lys Gly Arg Lys Hi






#s Val Thr Val Ile Ala






            340      






#           345      






#           350













Val Asp Ser Val Ser Lys Glu Asp Leu Ile Ar






#g Ile Val Arg Asn Ser






        355          






#       360          






#       365













Ile Glu Ala Ala Arg Lys Glu Asn Leu Ser Gl






#y Ser Thr Gly Phe Val






    370              






#   375              






#   380













Leu Ser Thr Ser Leu Thr Ile Gly Glu Ile Hi






#s Ser Leu Leu Met Ser






385                 3






#90                 3






#95                 4






#00













Ala Gly Met Leu Pro Thr Gly Phe Asp Ala Ph






#e Ile Cys Asn Ser Gly






                405  






#               410  






#               415













Ser Asp Leu Tyr Tyr Pro Ser Cys Thr Gly As






#p Thr Pro Ser Asn Ser






            420      






#           425      






#           430













Arg Val Thr Phe Ala Leu Asp Arg Ser Tyr Gl






#n Ser His Ile Glu Tyr






        435          






#       440          






#       445













His Trp Gly Gly Glu Gly Leu Arg Lys Tyr Le






#u Val Lys Trp Ala Ser






    450              






#   455              






#   460













Ser Val Val Glu Arg Arg Gly Arg Ile Glu Ly






#s Gln Val Ile Phe Glu






465                 4






#70                 4






#75                 4






#80













Asp Pro Glu His Ser Ser Thr Tyr Cys Leu Al






#a Phe Lys Val Val Asn






                485  






#               490  






#               495













Pro Asn His Leu Pro Pro Leu Lys Glu Leu Gl






#n Lys Leu Met Arg Ile






            500      






#           505      






#           510













Gln Ser Leu Arg Cys His Ala Leu Tyr Asn Hi






#s Gly Ala Thr Arg Leu






        515          






#       520          






#       525













Ser Val Ile Pro Ile His Ala Ser Arg Ser Ly






#s Ala Leu Arg Tyr Leu






    530              






#   535              






#   540













Ser Val Arg Trp Gly Ile Glu Leu Gln Asn Va






#l Val Val Leu Val Gly






545                 5






#50                 5






#55                 5






#60













Glu Thr Gly Asp Ser Asp Tyr Glu Glu Leu Ph






#e Gly Gly Leu His Lys






                565  






#               570  






#               575













Thr Val Ile Leu Lys Gly Glu Phe Asn Thr Se






#r Ala Asn Arg Ile His






            580      






#           585      






#           590













Ser Val Arg Arg Tyr Pro Leu Gln Asp Val Va






#l Ala Leu Asp Ser Pro






        595          






#       600          






#       605













Asn Ile Ile Gly Ile Glu Gly Tyr Gly Thr As






#p Asp Met Arg Ser Ala






    610              






#   615              






#   620













Leu Lys Gln Leu Asp Ile Arg Ala Gln






625                 6






#30




















<210> SEQ ID NO 27






<211> LENGTH: 1738






<212> TYPE: DNA






<213> ORGANISM: Triticum aestivum













<400> SEQUENCE: 27













gcacgagccg ctgcttatgg tctgcccgtg gtggcaacca agaacggcgg gc






#cggtggac     60













atcctcaagg cgcttcacaa cggcctgctg gtggacccgc actccgccga gg






#cgatcacc    120













ggcgcgctgc tcagcctgct ggccgacaag gggcagtggc tggagagccg ac






#gcaacggc    180













ctgcgcaaca tccaccgctt ctcgtggccg caccactgcc gcctctacct ct






#cccacgtc    240













gccgcctact gcgaccaccc gtcgccgcac cagcggctcc gcgtccctgg cg






#tcccgtct    300













gcctcggcga gcatgggcgg tgacgactcc ctctcggact cactccgtgg cc






#tctcgctc    360













caaatctccg tggacgcctc caacgacctc aatgccgggg actcggccgc gc






#tgatcatg    420













gacgccctac gccgccgccc ggcggccgac aggcgcgagg gctccggcag gg






#cgttgggc    480













ttcgcgccgg gaaggaggca gaggctcctt gtcgtcgccg tcgactgcta cg






#gcgatgac    540













ggcaagcccg acgtcgagca actgaagaaa gccatcgacg cggcgatgtc cg






#ccagtgac    600













ggcgcgggag ggcggcaggg gtacgtgctc tcgaccggca tgaccatccc cg






#agaccgcg    660













gagacgctca aggcctgcgg cgccgacccg gccggcttcg acgcgctcat tt






#gcagcagc    720













ggcgcggaga tatgctaccc gtggaaggag ctgacggccg acgaggagta ct






#ccggccac    780













gtggcgttcc ggtggcccgg cgaccacgtg aaaaccgtcg tgccgaggct cg






#ggaaggcc    840













gacgacgcgc aggcgtccga cctcgccgtc gacgtgtccg ctggctccgt gc






#actgccac    900













gcctacgccg ccaccgacgc gtccaaggtg aagaaggtgg attcgatcag gc






#aggcgctg    960













cggatgcgcg ggttccggtg caacctcgtc tacacgcgcg cgtgcacgcg cc






#tcaacgtc   1020













atccctctct ccgcttcccg cccacgcgcg ttgaggtacc tgtcgataca gt






#ggggcatc   1080













gatctcgcca aggtggcggt gctcgtcggc gagaccggag acaccgaccg cg






#agaagctc   1140













ctgccggggc tgcacaagac ggtgatcctg ccggggatgg tctcccgcgg ca






#gcgagcag   1200













ctcgtccgcg gcgaggacgg gtacgccacg caggacgtcg tggccatgga ct






#ccccgaac   1260













atcatcacga tcgccgaagg ccaggctgtc tctgaccttc tcaatgccat gt






#gatgtgac   1320













tatgcgagag accatcctct gccccattgt ccacagctcc tacgtaattc tg






#gcctgtaa   1380













ttttggcagg aacaggactg cagaattttc atacaaggta tacaatttta tg






#gatgtgca   1440













agcatgagca aacatgtggc taataatttt ttatgtctta gcatgcctcc ca






#gaggtctg   1500













ttgtacatat atatacactt tataaatgaa cgcaagaaag aaattgcatg tg






#aaaatgat   1560













gcttttttta tggaatttta ctcggatatg atacgagaca agtctgtgaa aa






#aaaaaaaa   1620













aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa






#aaaaaaaa   1680













aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa






#aaaaaa     1738




















<210> SEQ ID NO 28






<211> LENGTH: 437






<212> TYPE: PRT






<213> ORGANISM: Triticum aestivum













<400> SEQUENCE: 28













Ala Arg Ala Ala Ala Tyr Gly Leu Pro Val Va






#l Ala Thr Lys Asn Gly






  1               5 






#                 10 






#                 15













Gly Pro Val Asp Ile Leu Lys Ala Leu His As






#n Gly Leu Leu Val Asp






             20     






#             25     






#             30













Pro His Ser Ala Glu Ala Ile Thr Gly Ala Le






#u Leu Ser Leu Leu Ala






         35         






#         40         






#         45













Asp Lys Gly Gln Trp Leu Glu Ser Arg Arg As






#n Gly Leu Arg Asn Ile






     50             






#     55             






#     60













His Arg Phe Ser Trp Pro His His Cys Arg Le






#u Tyr Leu Ser His Val






 65                 






# 70                 






# 75                 






# 80













Ala Ala Tyr Cys Asp His Pro Ser Pro His Gl






#n Arg Leu Arg Val Pro






                 85 






#                 90 






#                 95













Gly Val Pro Ser Ala Ser Ala Ser Met Gly Gl






#y Asp Asp Ser Leu Ser






            100      






#           105      






#           110













Asp Ser Leu Arg Gly Leu Ser Leu Gln Ile Se






#r Val Asp Ala Ser Asn






        115          






#       120          






#       125













Asp Leu Asn Ala Gly Asp Ser Ala Ala Leu Il






#e Met Asp Ala Leu Arg






    130              






#   135              






#   140













Arg Arg Pro Ala Ala Asp Arg Arg Glu Gly Se






#r Gly Arg Ala Leu Gly






145                 1






#50                 1






#55                 1






#60













Phe Ala Pro Gly Arg Arg Gln Arg Leu Leu Va






#l Val Ala Val Asp Cys






                165  






#               170  






#               175













Tyr Gly Asp Asp Gly Lys Pro Asp Val Glu Gl






#n Leu Lys Lys Ala Ile






            180      






#           185      






#           190













Asp Ala Ala Met Ser Ala Ser Asp Gly Ala Gl






#y Gly Arg Gln Gly Tyr






        195          






#       200          






#       205













Val Leu Ser Thr Gly Met Thr Ile Pro Glu Th






#r Ala Glu Thr Leu Lys






    210              






#   215              






#   220













Ala Cys Gly Ala Asp Pro Ala Gly Phe Asp Al






#a Leu Ile Cys Ser Ser






225                 2






#30                 2






#35                 2






#40













Gly Ala Glu Ile Cys Tyr Pro Trp Lys Glu Le






#u Thr Ala Asp Glu Glu






                245  






#               250  






#               255













Tyr Ser Gly His Val Ala Phe Arg Trp Pro Gl






#y Asp His Val Lys Thr






            260      






#           265      






#           270













Val Val Pro Arg Leu Gly Lys Ala Asp Asp Al






#a Gln Ala Ser Asp Leu






        275          






#       280          






#       285













Ala Val Asp Val Ser Ala Gly Ser Val His Cy






#s His Ala Tyr Ala Ala






    290              






#   295              






#   300













Thr Asp Ala Ser Lys Val Lys Lys Val Asp Se






#r Ile Arg Gln Ala Leu






305                 3






#10                 3






#15                 3






#20













Arg Met Arg Gly Phe Arg Cys Asn Leu Val Ty






#r Thr Arg Ala Cys Thr






                325  






#               330  






#               335













Arg Leu Asn Val Ile Pro Leu Ser Ala Ser Ar






#g Pro Arg Ala Leu Arg






            340      






#           345      






#           350













Tyr Leu Ser Ile Gln Trp Gly Ile Asp Leu Al






#a Lys Val Ala Val Leu






        355          






#       360          






#       365













Val Gly Glu Thr Gly Asp Thr Asp Arg Glu Ly






#s Leu Leu Pro Gly Leu






    370              






#   375              






#   380













His Lys Thr Val Ile Leu Pro Gly Met Val Se






#r Arg Gly Ser Glu Gln






385                 3






#90                 3






#95                 4






#00













Leu Val Arg Gly Glu Asp Gly Tyr Ala Thr Gl






#n Asp Val Val Ala Met






                405  






#               410  






#               415













Asp Ser Pro Asn Ile Ile Thr Ile Ala Glu Gl






#y Gln Ala Val Ser Asp






            420      






#           425      






#           430













Leu Leu Asn Ala Met






        435




















<210> SEQ ID NO 29






<211> LENGTH: 1057






<212> TYPE: PRT






<213> ORGANISM: Citrus unshiu













<400> SEQUENCE: 29













Met Ala Gly Asn Asp Trp Ile Asn Ser Tyr Le






#u Glu Ala Ile Leu Asp






  1               5 






#                 10 






#                 15













Val Gly Pro Gly Leu Asp Asp Ala Lys Ser Se






#r Leu Leu Leu Arg Glu






             20     






#             25     






#             30













Arg Gly Arg Phe Ser Pro Thr Arg Tyr Phe Va






#l Glu Glu Val Ile Thr






         35         






#         40         






#         45













Gly Phe Asp Glu Thr Asp Leu His Arg Ser Tr






#p Val Lys Ala Gln Ala






     50             






#     55             






#     60













Thr Arg Ser Pro Gln Glu Arg Asn Thr Arg Le






#u Glu Asn Met Cys Trp






 65                 






# 70                 






# 75                 






# 80













Arg Ile Trp Asn Leu Ala Arg Gln Lys Lys Gl






#n Leu Glu Gly Glu Ala






                 85 






#                 90 






#                 95













Ala Gln Arg Met Ala Lys Arg Arg Leu Glu Ar






#g Glu Arg Gly Arg Arg






            100      






#           105      






#           110













Glu Ala Thr Ala Asp Met Ser Glu Asp Leu Se






#r Glu Gly Glu Lys Gly






        115          






#       120          






#       125













Asp Ile Val Ser Asp Val Ser Ala His Gly As






#p Ser Thr Arg Ser Arg






    130              






#   135              






#   140













Leu Pro Arg Ile Ser Ser Val Asp Ala Met Gl






#u Thr Trp Ile Ser Gln






145                 1






#50                 1






#55                 1






#60













Gln Lys Gly Lys Lys Leu Tyr Ile Val Leu Il






#e Ser Ile His Gly Leu






                165  






#               170  






#               175













Ile Arg Gly Glu Asn Met Glu Leu Gly Arg As






#p Ser Asp Thr Gly Gly






            180      






#           185      






#           190













Gln Val Lys Tyr Val Val Glu Leu Ala Arg Al






#a Leu Gly Ser Met Pro






        195          






#       200          






#       205













Gly Val Tyr Arg Val Asp Leu Leu Thr Arg Gl






#n Val Ser Ala Pro Asp






    210              






#   215              






#   220













Val Asp Trp Ser Tyr Gly Glu Pro Thr Glu Me






#t Leu Thr Pro Arg Asn






225                 2






#30                 2






#35                 2






#40













Ser Asp Asp Phe Met Asp Asp Met Gly Glu Se






#r Ser Gly Ala Tyr Ile






                245  






#               250  






#               255













Ile Arg Ile Pro Phe Gly Pro Lys Asp Lys Ty






#r Ile Ala Lys Glu Leu






            260      






#           265      






#           270













Leu Trp Pro His Ile Pro Glu Phe Val Asp Gl






#y Ala Leu Asn His Ile






        275          






#       280          






#       285













Ile Arg Met Ser Asn Val Leu Gly Glu Gln Il






#e Gly Gly Gly Lys Pro






    290              






#   295              






#   300













Val Trp Pro Val Ala Ile His Gly His Tyr Al






#a Asp Ala Gly Asp Ser






305                 3






#10                 3






#15                 3






#20













Ala Ala Leu Leu Ser Gly Ala Leu Asn Val Pr






#o Met Leu Phe Thr Gly






                325  






#               330  






#               335













His Ser Leu Gly Arg Asp Lys Leu Glu Gln Le






#u Leu Lys Gln Ala Arg






            340      






#           345      






#           350













Leu Ser Arg Asp Glu Ile Asn Ala Thr Tyr Ly






#s Ile Met Arg Arg Ile






        355          






#       360          






#       365













Glu Ala Glu Glu Leu Ser Leu Asp Ala Ser Gl






#u Ile Val Ile Thr Ser






    370              






#   375              






#   380













Thr Arg Gln Glu Ile Glu Glu Gln Trp Arg Le






#u Tyr Asp Gly Phe Asp






385                 3






#90                 3






#95                 4






#00













Pro Val Leu Glu Arg Lys Leu Arg Ala Arg Il






#e Lys Arg Asn Val Ser






                405  






#               410  






#               415













Cys Tyr Gly Lys Phe Met Pro Arg Met Ala Il






#e Ile Pro Pro Gly Met






            420      






#           425      






#           430













Glu Phe His His Ile Val Pro Gln Asp Gly As






#p Met Asp Gly Glu Thr






        435          






#       440          






#       445













Glu Gly Asn Glu Asp Asn Pro Ala Ser Pro As






#p Pro Pro Ile Trp Ser






    450              






#   455              






#   460













Glu Ile Met Arg Phe Phe Thr Asn Pro Arg Ly






#s Pro Val Ile Leu Ala






465                 4






#70                 4






#75                 4






#80













Leu Ala Arg Pro Asp Pro Lys Lys Asn Ile Th






#r Thr Leu Val Lys Ala






                485  






#               490  






#               495













Phe Gly Glu Cys Arg Pro Leu Arg Glu Leu Al






#a Asn Leu Thr Leu Ile






            500      






#           505      






#           510













Met Gly Asn Arg Asp Gly Ile Asp Glu Met Se






#r Ser Thr Ser Ala Ser






        515          






#       520          






#       525













Val Leu Leu Ser Val Leu Lys Leu Ile Asp Ly






#s Tyr Asp Leu Tyr Gly






    530              






#   535              






#   540













Gln Val Ala Tyr Pro Lys His His Lys Gln Se






#r Asp Val Pro Glu Ile






545                 5






#50                 5






#55                 5






#60













Tyr Arg Leu Ala Ala Lys Thr Lys Gly Val Ph






#e Ile Asn Pro Ala Phe






                565  






#               570  






#               575













Ile Glu Pro Phe Gly Leu Thr Leu Ile Glu Al






#a Ala Ala His Gly Leu






            580      






#           585      






#           590













Pro Ile Val Ala Thr Lys Asn Gly Gly Pro Va






#l Asp Ile His Arg Val






        595          






#       600          






#       605













Leu Asp Asn Gly Leu Leu Val Asp Pro His As






#p Gln Gln Ser Ile Ala






    610              






#   615              






#   620













Asp Ala Leu Leu Lys Leu Val Ala Gly Lys Gl






#n Leu Trp Ala Arg Cys






625                 6






#30                 6






#35                 6






#40













Arg Gln Asn Gly Leu Lys Asn Ile His Leu Ph






#e Ser Trp Pro Glu His






                645  






#               650  






#               655













Cys Lys Thr Tyr Leu Ser Arg Ile Ala Gly Cy






#s Lys Pro Arg His Pro






            660      






#           665      






#           670













Gln Trp Gln Arg Thr Asp Asp Gly Gly Glu Th






#r Ser Glu Ser Asp Ser






        675          






#       680          






#       685













Pro Gly Asp Ser Leu Arg Asp Ile Gln Asp Il






#e Ser Leu Asn Leu Lys






    690              






#   695              






#   700













Phe Ser Leu Asp Gly Glu Lys Ser Gly Ala Se






#r Gly Asn Asp Asp Ser






705                 7






#10                 7






#15                 7






#20













Leu Asp Ser Glu Gly Asn Val Ala Asp Arg Ly






#s Ser Arg Leu Glu Asn






                725  






#               730  






#               735













Ala Val Leu Ala Trp Ser Lys Gly Val Leu Ly






#s Asp Thr Arg Lys Ser






            740      






#           745      






#           750













Gly Ser Thr Asp Lys Val Asp Gln Asn Thr Gl






#y Ala Ala Lys Phe Pro






        755          






#       760          






#       765













Ala Leu Arg Arg Arg Lys His Ile Phe Val Il






#e Ser Val Asp Cys Asp






    770              






#   775              






#   780













Ser Thr Thr Gly Leu Leu Asp Ala Thr Lys Ly






#s Ile Cys Glu Ala Val






785                 7






#90                 7






#95                 8






#00













Glu Lys Glu Arg Thr Glu Gly Ser Ile Gly Ph






#e Ile Leu Ser Thr Ser






                805  






#               810  






#               815













Met Thr Ile Ser Glu Ile His Ser Phe Leu Va






#l Ser Gly His Leu Ser






            820      






#           825      






#           830













Pro Ser Asp Phe Asp Ala Phe Ile Cys Asn Se






#r Gly Ser Asp Leu Tyr






        835          






#       840          






#       845













Tyr Ser Thr Leu Asn Ser Glu Asp Gly Pro Ph






#e Val Val Asp Phe Tyr






    850              






#   855              






#   860













Tyr His Ser His Ile Glu Tyr Arg Trp Gly Gl






#y Glu Gly Leu Arg Lys






865                 8






#70                 8






#75                 8






#80













Thr Leu Val Arg Trp Ala Ser Gln Val Thr As






#p Lys Lys Ala Glu Ser






                885  






#               890  






#               895













Gly Glu Lys Val Leu Thr Pro Ala Glu Gln Le






#u Ser Thr Asn Tyr Cys






            900      






#           905      






#           910













Tyr Ala Phe Ser Val Gln Lys Pro Gly Met Th






#r Pro Pro Val Lys Glu






        915          






#       920          






#       925













Leu Arg Lys Val Leu Arg Ile Gln Ala Leu Ar






#g Cys His Val Ile Tyr






    930              






#   935              






#   940













Cys Gln Asn Gly Ser Arg Val Asn Val Ile Pr






#o Val Leu Ala Ser Arg






945                 9






#50                 9






#55                 9






#60













Ser Gln Ala Leu Arg Tyr Leu Tyr Leu Arg Tr






#p Gly Val Glu Leu Ser






                965  






#               970  






#               975













Lys Met Val Val Phe Val Gly Glu Ser Gly As






#p Thr Asp Tyr Glu Gly






            980      






#           985      






#           990













Leu Leu Gly Gly Val His Lys Thr Val Ile Le






#u Lys Gly Ile Cys Ser






        995          






#      1000           






#     1005













Ser Ser Ser Asn Gln Ile His Ala Asn Arg Se






#r Tyr Pro Leu Ser Asp






   1010              






#  1015               






# 1020













Val Met Pro Ile Asp Ser Pro Asn Ile Val Gl






#n Thr Pro Glu Asp Cys






1025               1030 






#               1035  






#              1040













Thr Thr Ser Asp Ile Arg Ser Ser Leu Glu Gl






#n Leu Gly Leu Leu Lys






               1045  






#              1050   






#             1055













Val













Claims
  • 1. An isolated polynucleotide comprising:(a) a nucleotide sequence encoding a polypeptide having sucrose phosphate synthase activity, wherein the polypeptide has an amino acid sequence of SEQ ID NO:24, or (b) a complement of the nucleotide sequence of (a), wherein the complement and the nucleotide sequence consist of the same number of nucleotides and are 100% complementary.
  • 2. The polynucleotide of claim 1 wherein the nucleotide sequence comprises SEQ ID NO:23.
  • 3. A vector comprising the polynucleotide of claim 1.
  • 4. A recombinant DNA construct comprising the polynucleotide of claim 1 operably linked to at least one regulatory sequence.
  • 5. A method for transforming a cell, comprising transforming a cell with the recombinant DNA construct of claim 4.
  • 6. A host cell comprising the recombinant DNA construct of claim 4.
  • 7. A method for production of a polypeptide having sucrose phosphate synthase activity comprising the steps of cultivating the cell of claim 6 under conditions that allow for the synthesis of the polypeptide and isolating the polypeptide from the cultivated cells, from culture medium, or from both the cultivated cells and the culture medium.
Parent Case Info

This application is a continuation-in-part of U.S. patent application Ser. No. 09/697,367, filed Oct. 26, 2000 now issued as U.S. Pat. No. 6,323,015, which is a continuation of PCT Application No. PCT/US99/09865, filed May 6, 1999, which claims the benefit of U.S. Provisional Application No. 60/084,529, filed May 7, 1998.

US Referenced Citations (1)
Number Name Date Kind
5665892 Van Assche et al. Sep 1997 A
Foreign Referenced Citations (1)
Number Date Country
WO 9957285 Nov 1999 WO
Non-Patent Literature Citations (7)
Entry
Akira Komatsu et al., Mol Genet, vol. 252:346-351, 1996, Cloning and Molecular Analysis of CDNAs Encoding Three Sucrose Phosphate Synthase Isoforms from a Citrus Fruit.
Ann C. Worrell et al., The Plant Cell, vol. 3:1121-1130, 1991, Expression of a Maize Sucrose Phosphate Synthase in Tomato Alters Leaf Carbohydrate Partitioning.
National Center for Biotechnology Information General Identifier No.: 3915023, Dec. 15, 1998, Komatsu A., et. al., Cloning amd Molecular Analysis of CDNAS Encoding Three Sucrose Phosphate Synthase Isoforms from a Citrus Fruit.
National Center for Biotechnology Information General Identifier No.: 1854376, Feb. 13, 1999, Sugiharto, B. et. al., Differential Expression of Two Genes for Sucrose-Phosphate Synthase in Sugarcane: Molecular Cloning of the CDNAS and Comparative Analysis of Gene Expression.
National Center for Biotechnology Information General Identifier No.: 1854378, Feb. 13, 1999, Sugiharto, B. et. al., Differential Expression of Two Genes for Sucrose-Phosphate Synthase in Sugarcane: Molecular Cloning of the CDNAS and Comparative Analysis of Gene Expression.
National Center for Biotechnology Information General Identifier No.: 168626, Apr. 27, 1993, Worrell, A. C. et. al., Expression of a Maize Sucrose Phosphate in Tomato Alters Leaf Carbohydrate Partitioning.
National Center for Biotechnology Information General Identifier No.: 7433836, Jul. 16, 1999, Bevan, M. et. al.
Provisional Applications (1)
Number Date Country
60/084529 May 1998 US
Continuations (1)
Number Date Country
Parent PCT/US99/09865 May 1999 US
Child 09/697367 US
Continuation in Parts (1)
Number Date Country
Parent 09/697367 Oct 2000 US
Child 09/918909 US