Claims
- 1. An amphiphile for the formation of a synthetic ion channel in a phospholipid bilayer membrane, the amphiphile corresponding to the formula
- 2. The amphiphile of claim 1 wherein A is hydrocarbyl.
- 3. The amphiphile of claim 1 wherein A is —NR1R2 and each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl.
- 4. The amphiphile of claim 1 wherein C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl.
- 5. The amphiphile of claim 1 wherein C comprises a diglycoyl, succinoyl, thioglycoyl, or 1,4-terephthaloyl.
- 6. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, and C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl.
- 7. The amphiphile of claim 1 wherein H1 or H2 comprises the residue of at least one α-amino acid.
- 8. The amphiphile of claim 1 wherein H1 and H2 each comprise the residue of at least one α-amino acid.
- 9. The amphiphile of claim 1 wherein H1 and H2 each comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine.
- 10. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, and each of H1 and H2 comprise the residue of at least one α-amino acid.
- 11. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, and each of H1 and H2 comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine.
- 12. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl and each of H1 and H2 comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine.
- 13. The amphiphile of claim 1 wherein B is an optionally substituted 5 or 6-membered ring comprising carbon and optionally at least one nitrogen, oxygen, or sulfur ring atom wherein H1 is covalently linked to one of the ring atoms and H2 is covalently linked to another of the ring atoms.
- 14. The amphiphile of claim 1 wherein B is a 5 or 6-membered ring with H1 being covalently bonded to one of the ring atoms and H2 being covalently bonded to another of the ring atoms, the 5 or 6-membered ring being selected from the group consisting of optionally substituted residues of proline, pipecolic acid, Z-1,2-dicarboxycyclobutane, 2,5-dicarboxyfuran, or 1,3-diaminobenzene.
- 15. The amphiphile of claim 1 wherein B is the residue of proline, 3-hydroxyproline, or 4-hydroxyproline.
- 16. The amphiphile of claim 1 wherein B is a proline residue.
- 17. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, and each of H1 and H2 comprise the residue of at least one α-amino acid.
- 18. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, and B is an optionally substituted 5 or 6-membered ring comprising carbon and optionally at least one nitrogen, oxygen, or sulfur ring atom wherein H1 is covalently linked to one of the ring atoms and H2 is covalently linked to another of the ring atoms.
- 19. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, each of H1 and H2 comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine, and B is an optionally substituted 5 or 6-membered ring comprising carbon and optionally at least one nitrogen, oxygen, or sulfur ring atom wherein H1 is covalently linked to one of the ring atoms and H2 is covalently linked to another of the ring atoms.
- 20. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl, each of H1 and H2 comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine, and B is a 5 or 6-membered ring with H1 being covalently bonded to one of the ring atoms and H2 being covalently bonded to another of the ring atoms, the 5 or 6-membered ring being selected from the group consisting of optionally substituted residues of proline, pipecolic acid, Z-1,2-dicarboxycyclobutane, 2,5-dicarboxyfuran, or 1,3-diaminobenzene.
- 21. The amphiphile of claim 1 wherein A is —NR1R2, each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl, C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl, each of H1 and H2 comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine, and B is the residue of proline or 4-hydroxyproline.
- 22. The amphiphile of claim 1 wherein T is benzyl or benzyloxy.
- 23. The amphiphile of claim 1 wherein A is selected from the group consisting of dialkylamino in which the alkyl groups are normal alkyl groups, they are the same or different, and range from CH3 to C18H37;
C is —COCH2OCH2CO—; H1 and H2 are independently selected from the group consisting of glycine; B is selected from the group consisting of leucine, proline, pipecolic acid, and 3-amino-4-methoxybenzoic acid; and T is selected from the group consisting of ethyl ester, isopropyl ester, n-heptyl ester, cyclohexylmethyl ester, and benzyl ester.
- 24. The amphiphile of claim 1 wherein the amphiphile is selected from the group consisting of (H17C8)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph (H21C10)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H25C12)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H29C14)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H33Cl6)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H21C10)2NCOCH2OCH2CO-Gly-Gly-Gly-Pip-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pip-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-MBA-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Leu-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2CH3, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH(CH3)2, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-O(CH2)6CH3, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2-c-C6H11, and (H21C10)N(C2H5)COCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph.
- 25. A combination, the combination comprising a phospholipid bilayer membrane and an assembly of synthetic amphiphiles, the assembly forming an ion channel through membrane.
- 26. The combination of claim 25 wherein the assembly comprises amphiphiles independently selected from amphiphiles having the formula
- 27. The combination of claim 25 wherein the channel is formed by the assembly of two or three synthetic amphiphiles.
- 28. The combination of claim 25 wherein the ion channel is an anion channel.
- 29. The combination of claim 25 wherein the ion channel is a chloride, nitrate, sulfate, bicarbonate, phosphate, acetate, or carboxyfluorescein anion channel.
- 30. The combination of claim 25 wherein the ion channel is a chloride ion channel.
- 31. The combination of claim 25 wherein the ion channel is a cation channel.
- 32. The combination of claim 25 wherein the ion channel is a sodium, potassium, calcium, magnesium or barium ion channel.
- 33. The combination of claim 25 wherein the ion channel is a sodium or potassium ion channel.
- 34. The combination of claim 25 wherein the ion channel has a pore size of about 4 to about 25 Å.
- 35. The combination of claim 25 wherein the ion channel has a pore size of about 6 to about 20 Å.
- 36. The combination of claim 25 wherein the ion channel is formed by an assembly of amphiphiles independently selected from amphiphiles having the formula
- 37. The combination of claim 25 wherein the ion channel is formed by an assembly of amphiphiles independently selected from the group consisting of
(H17C8)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph (H21C10)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H25C12)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H29C14)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H33C16)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph, (H21C10)2NCOCH2OCH2CO-Gly-Gly-Gly-Pip-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pip-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-MBA-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Leu-Gly-Gly-Gly-OCH2Ph, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2CH3, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH(CH3)2, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-O(CH2)6CH3, (H37C18)2NCOCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2-c-C6H11, and (H21C10)N(C2H5)COCH2OCH2CO-Gly-Gly-Gly-Pro-Gly-Gly-Gly-OCH2Ph.
- 38. A process for forming a synthetic ion channel in a phospholipid bilayer membrane, the process comprising combining the membrane with synthetic amphiphiles having the capacity to self-assemble to form the ion channel.
- 39. The process of claim 38 wherein the amphiphiles are selected from amphiphiles corresponding to the formula
- 40. The process of claim 39 wherein A is —NR1R2 and each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl.
- 41. The process of claim 39 wherein C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl.
- 42. The process of claim 39 wherein H1 and H2 each comprise the residue of at least one α-amino acid.
- 43. The process of claim 39 wherein H1 and H2 each comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine.
- 44. The process of claim 39 wherein B is an optionally substituted 5 or 6-membered ring comprising carbon and optionally at least one nitrogen, oxygen, or sulfur ring atom wherein H1 is covalently linked to one of the ring atoms and H2 is covalently linked to another of the ring atoms.
- 45. The process of claim 39 wherein B is a proline residue.
- 46. The process of claim 39 wherein T is benzyl or benzyloxy.
- 47. A process for modulating the flow of ions through a phospholipid bilayer membrane, the process comprising forming an ion channel in the membrane from an assembly of synthetic amphiphiles and thereafter imposing an ion gradient or a membrane potential.
- 48. The process of claim 47 wherein the amphiphiles are selected from amphiphiles corresponding to the formula
- 49. The process of claim 48 wherein A is —NR1R2 and each of R1 and R2 are independently hydrocarbyl or substituted hydrocarbyl.
- 50. The process of claim 48 wherein C is substituted hydrocarbyl comprising ether, thioether, carbonyl, or thiocarbonyl.
- 51. The process of claim 48 wherein H1 and H2 each comprise the residue of at least one α-amino acid.
- 52. The process of claim 48 wherein H1 and H2 each comprise the residue of at least one α-amino acid independently selected from the group consisting of alanine, glycine, isoleucine, leucine, methionine, phenylalanine, tryptophan and valine.
- 53. The process of claim 48 wherein B is an optionally substituted 5 or 6-membered ring comprising carbon and optionally at least one nitrogen, oxygen, or sulfur ring atom wherein H1 is covalently linked to one of the ring atoms and H2 is covalently linked to another of the ring atoms.
- 54. The process of claim 48 wherein B is a proline residue.
- 55. The process of claim 48 wherein T is benzyl or benzyloxy.
REFERENCE TO RELATED APPLICATIONS
[0001] This application claims the benefit of U.S. Provisional Application No. 60/348,803 filed Jan. 14, 2002, the entire contents of which are incorporated herein by reference.
Government Interests
[0002] This invention was made with Government support under NIH Grant #GM 36262 awarded by the National Institutes of Health. The Government has certain rights in the invention.
Provisional Applications (1)
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Number |
Date |
Country |
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60348803 |
Jan 2002 |
US |