The present invention relates generally to systems and methods for positioning objects in a desired orientation and, more particularly, to systems and methods for singulating, orienting, transferring, and/or plating plant embryos.
Existing methods for harvesting plant embryos frequently require workers to manually singulate extracted embryos, to manually identify embryos having desired properties, to manually place extracted embryos in a desired orientation, and/or to manually plate extracted embryos within a desired container. For example, during harvesting of corn embryos, extracted embryos may be manually singulated. The singulated embryos can then be manually placed in a first orientation during a chromosome doubling process and may be manually placed in a second, different orientation when contacting a growth medium. Workers can manually select the embryos that should be transferred to the growth medium, and the plating of those selected embryos can be done manually. There is a need for automated systems and methods for accurately and reliably singulating, orienting, transferring, and/or plating extracted embryos.
Disclosed herein are systems and methods for plating extracted plant embryos. In exemplary aspects, the disclosed systems and methods can be used to singulate, transfer, or orient extracted plant embryos.
In various aspects, disclosed herein is an embryo singulation apparatus having a fluid bath, a screen, an actuator, and a camera. The screen can have a shape configured for receipt within the fluid bath. The actuator can be coupled to the screen and configured to selectively move the screen relative to a vertical axis. The screen can be moveable about and between a submerged position within the fluid bath and an elevated position above the fluid bath. The camera can be positioned above the fluid bath relative to the vertical axis. In use, the camera can be configured to produce an image of embryos on the screen when the screen is in the elevated position above the fluid bath.
Also disclosed are embryo singulation methods including: positioning a plurality of embryos on a screen of the embryo singulation apparatus as disclosed herein; activating the actuator to move the screen to the submerged position within the fluid bath; activating the actuator to move the screen to the elevated position; activating the camera to produce an image of the embryos on the screen; processing the image to identify singulated embryos on the screen; and removing the singulated embryos from the screen.
In various aspects, disclosed herein is an object orientation apparatus having first and second nozzle assemblies. Each of the first and second nozzle assemblies can have a respective vacuum nozzle and a respective actuation subassembly. Each vacuum nozzle can have a respective longitudinal axis and a respective distal end. Each vacuum nozzle can be configured to apply suction to retain an object against the distal end of the vacuum nozzle. Within each nozzle assembly, the vacuum nozzle is rotatable by the actuation subassembly. The vacuum nozzles of the first and second nozzle assemblies are selectively rotatable to an object-transfer position in which the longitudinal axis of the first vacuum nozzle is aligned with the longitudinal axis of the second vacuum nozzle and the distal end of the first vacuum nozzle is positioned proximate the distal end of the second vacuum nozzle. Methods of positioning an object in a desired orientation using the object orientation apparatus are also disclosed. The methods can include: selectively activating at least one actuator of the actuation subassembly of the first nozzle assembly to position the first nozzle assembly in an object release/retrieval position; activating a vacuum source to apply suction through the vacuum nozzle of the first nozzle assembly to retain an object against the distal end of the vacuum nozzle of the first nozzle assembly; producing an image of the object using a camera; and determining an orientation of the object using a controller.
In various aspects, disclosed herein is an object orientation apparatus having a base assembly and first and second nozzle assemblies. The first nozzle assembly can include a first vacuum nozzle. The second nozzle assembly can include a second vacuum nozzle. Each of the first and second vacuum nozzles has a respective longitudinal axis and opposed first and second ends. Each vacuum nozzle can be configured to apply suction to retain an object against the second end of the vacuum nozzle, and each nozzle assembly can be independently rotationally coupled to the base assembly. The first and second nozzle assemblies can be selectively rotatable to an object-transfer position in which the longitudinal axis of the first vacuum nozzle is aligned with the longitudinal axis of the second vacuum nozzle and the second end of the first vacuum nozzle is positioned proximate the second end of the second vacuum nozzle. Methods of positioning an object in a desired orientation using the object orientation apparatus are also disclosed. The methods can include: selectively activating the first rotational actuator and the first transverse actuator to position the first vacuum nozzle in the object release/retrieval position; applying a vacuum force through the first vacuum nozzle to retain an object against the second end of the first vacuum nozzle; producing an image of the object using the camera; and determining an orientation of the object using the controller.
Further disclosed herein is an embryo plating system having an embryo singulation apparatus and an object orientation apparatus as disclosed herein.
The present invention now will be described more fully hereinafter with reference to the accompanying drawings, in which some, but not all embodiments of the invention are shown. Indeed, this invention may be embodied in many different forms and should not be construed as limited to the embodiments set forth herein; rather, these embodiments are provided so that this disclosure will satisfy applicable legal requirements. Like numbers refer to like elements throughout. It is to be understood that this invention is not limited to the particular methodology and protocols described, as such may vary. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to limit the scope of the present invention.
Many modifications and other embodiments of the invention set forth herein will come to mind to one skilled in the art to which the invention pertains having the benefit of the teachings presented in the foregoing description and the associated drawings. Therefore, it is to be understood that the invention is not to be limited to the specific embodiments disclosed and that modifications and other embodiments are intended to be included within the scope of the appended claims. Although specific terms are employed herein, they are used in a generic and descriptive sense only and not for purposes of limitation.
As used herein the singular forms “a”, “an”, and “the” include plural referents unless the context clearly dictates otherwise. Thus, for example, reference to “an actuator” can include a plurality of such actuators, and so forth.
All technical and scientific terms used herein have the same meaning as commonly understood to one of ordinary skill in the art to which this invention belongs unless clearly indicated otherwise.
Ranges can be expressed herein as from “about” one particular value, and/or to “about” another particular value. When such a range is expressed, another aspect includes from the one particular value and/or to the other particular value. Similarly, when values are expressed as approximations, by use of the antecedent “about,” it will be understood that the particular value forms another aspect. It will be further understood that the endpoints of each of the ranges are significant both in relation to the other endpoint, and independently of the other endpoint.
As used herein, the terms “optional” or “optionally” mean that the subsequently described event or circumstance may or may not occur, and that the description includes instances where said event or circumstance occurs and instances where it does not.
The word “or” as used herein means any one member of a particular list and also includes any combination of members of that list.
The present invention comprises systems and methods for orienting objects (e.g., extracted embryos) in desired orientations for further processing. In exemplary aspects, the disclosed systems and methods can be used to position extracted plant embryos in a desired orientation for contacting a growth medium. Optionally, in these aspects, the disclosed systems and methods can be used to singulate the extracted plant embryos and evaluate the orientation of the singulated embryos to determine if the orientation of the embryos needs to be adjusted to permit further processing. Optionally, the disclosed systems and methods can be used to transport extracted embryos from a first location (e.g., a petri dish or singulation apparatus) to a second location (e.g., a tray containing a growth medium) while ensuring that the embryos are positioned in a desired orientation at the second location. It is contemplated that, unless otherwise stated, any of the steps of the disclosed methods can be performed in an automated fashion.
As used herein, the term “automated” refers to the use of mechanical, electrical, software, imaging, vision-based and/or other known automation-based technologies to augment processes typically performed by human interaction.
In exemplary aspects, it is contemplated that the actuators of the disclosed systems can be positioned in operative communication with at least one controller 800, such as, for example and without limitation, a programmable logic controller (PLC) or a computer having a processor as is known in the art. In these aspects, it is contemplated that the processor of the controller(s) can be configured to activate the actuators of the disclosed systems and assemblies in an automated manner.
In exemplary aspects, and with reference to
In exemplary aspects, the fluid bath can have a substantially rectangular or square perimeter. However, it is contemplated that any desired shape (e.g., a round perimeter shape) can be used. Similarly, it is contemplated that the screen can have any shape that is complementary to the shape of the fluid bath.
As shown in
In exemplary aspects, the screen 302 of the singulation apparatus 300 can be positioned on and/or coupled to an upper surface of a support element 308 that is configured for selective movement relative to the vertical axis. In these aspects, the actuator 304 of the singulation apparatus 300 can be coupled to the support element 308 such that the actuator is capable of imparting motion to the support element and, consequently, the screen 302. In exemplary aspects, the actuator 304 can be coupled to the support element 308 by at least one arm 306 that is coupled to the actuator and that extends to the support element. Optionally, in these aspects, the actuator 304 can be coupled to a horizontal platform 305 that is configured for selective movement relative to the vertical axis, and the arms 306 can be coupled to the platform and extend from the platform to the support element 308. In further aspects, the support element 308 can define at least one engagement structure 309 that is configured for selective engagement with the arms. It is contemplated that each engagement structure 309 of the support element 308 can be a recess, a projection, an opening, a slot, or other conventional engagement means that is configured to engage a corresponding portion of an arm 306. Optionally, in some aspects, the arms 306 can be shaped to at least partially extend under the support element 308 to provide additional support and stability to the support element (and the screen 302). For example, as shown in
In exemplary aspects, the singulation apparatus 300 can further comprise a controller 800 positioned in communication with the camera 301. In these aspects, the controller 800 can comprise a processor configured to analyze the image of the screen 302 produced by the camera 301 to identify singulated embryos on the screen. In one aspect, the processor of the controller 800 can be configured to identify contours of objects (e.g., embryos) on the screen 302 to determine the presence of singulated objects (e.g., embryos) on the screen. In another aspect, the controller 800 can be configured to direct the actuator 304 to move the screen about and between the submerged position and the elevated position.
In use, the singulation apparatus 300 can singulate objects (e.g., previously extracted embryos) for use in downstream processes as further disclosed herein. In exemplary aspects, a method for singulating objects (e.g., embryos) can comprise positioning a plurality of objects (e.g., embryos) on the screen of the singulation apparatus. In these aspects, it is contemplated that the objects (e.g., embryos) can be placed on the screen in either a manual or automated fashion. In another aspect, the method can further comprise activating the actuator to move the screen to the submerged position within the fluid bath. Optionally, in this aspect, the fluid bath can contain an aqueous solution. Optionally, it is contemplated that the liquid bath can be filled with at least one of water, solution, buffer, or liquid gel. In an additional aspect, the method can further comprise activating the actuator to move the screen to the elevated position. In a further aspect, the method can further comprise activating the camera to produce an image of the objects (e.g., embryos) on the screen. In another aspect, the method can further comprise processing the image to identify singulated objects (e.g., embryos) on the screen. In still another aspect, the method can comprise removing the singulated objects (e.g., embryos) from the screen. Optionally, in this aspect, the singulated objects (e.g., embryos) can be removed from the screen by a vacuum nozzle.
In exemplary aspects, the method can further comprise repeating the steps of: activating the actuator to move the screen to the submerged position within the fluid bath; activating the actuator to move the screen to the elevated position; activating the camera to produce an image of the embryos on the screen; processing the image to identify singulated objects (e.g., embryos) on the screen; and removing the singulated objects (e.g., embryos) from the screen until a desired number of singulated objects (e.g., embryos) are removed from the screen. Thus, in use, each time the screen is moved from the submerged position to the elevated position, the processor can identify singulated objects (e.g., embryos) and initiate removal of the singulated objects (e.g., embryos). Then, the process can be repeated as necessary until a desired number of singulated objects (e.g., embryos) have been identified and removed from the screen. In operation, it is contemplated that the objects (e.g., embryos) on the screen will settle to a more singulated state following withdrawal of the screen from the fluid bath.
In exemplary aspects, the processor of the controller can identify singulated embryos on the screen by applying one or more threshold parameters to the image. Such threshold parameters can include size parameters, shape parameters, color parameters, and the like. In various aspects, the processor of the controller can identify singulated embryos in an automated manner by identifying the embryos on the screen and applying the threshold parameters to determine the locations of singulated embryos.
As shown in
With reference to
In exemplary aspects, each of the first and second nozzle assemblies 208a, 208b, 508a, 508b can comprise a respective vacuum nozzle 202a, 202b, 502a, 502b and a respective actuation subassembly 205a, 205b, 505a, 505b. In these aspects, each of the vacuum nozzles 202a, 202b, 502a, 502b can have a respective longitudinal axis 212a, 212b, 512 and a respective distal end 216a, 216b, 516a, 516b. In use, each vacuum nozzle 202a, 202b, 502a, 502b can be configured to apply suction to retain an object against the distal end 216a, 216b, 516a, 516b of the vacuum nozzle. In exemplary aspects, each vacuum nozzle 202a, 202b, 502a, 502b can be configured to apply a suction force that is at a sufficiently strong level to retain an embryo against the distal end 216a, 216b, 516a, 516b of the vacuum nozzle but at a sufficiently low level to avoid damage to the embryo. In another aspect, within each nozzle assembly 208a, 208b, 508a, 508b, the vacuum nozzle 202a, 202b, 502a, 502b is rotatable by the actuation subassembly 205a, 205b, 505a, 505b. In this aspect, the vacuum nozzles 202a, 202b, 502a, 502b of the first and second nozzle assemblies 208a, 208b, 508a, 508b are selectively rotatable to an object-transfer position in which the longitudinal axis of the first vacuum nozzle 202a, 502a is aligned with the longitudinal axis of the second vacuum nozzle 202b, 502b and the distal end 216a, 516a of the first vacuum nozzle is positioned proximate the distal end 216b, 516b of the second vacuum nozzle.
In exemplary aspects, each of the first and second vacuum nozzles 202a, 202b, 502a, 502b can be configured for compliant movement relative to its longitudinal axis. Optionally, in these aspects, the first and second vacuum nozzles 202a, 202b, 502a, 502b can be telescopic nozzles that are configured for “free” movement relative to their longitudinal axes. In use, the compliancy of the vacuum nozzles 202a, 202b, 502a, 502b can provide tolerance for engaging objects (e.g., embryos) as disclosed herein. For example, it is contemplated that the compliancy of the vacuum nozzles 202a, 202b, 502a, 502b can permit engagement of objects (e.g., embryos) when the objects are not positioned in an ideal (e.g., perfectly aligned) position for engagement.
In exemplary aspects, the vacuum nozzles 202a, 202b, 502a, 502b can comprise stainless steel. However, it is contemplated that other materials can be used. For example, in alternative aspects, it is contemplated that the vacuum nozzles 202a, 202b, 502a, 502b can comprise rubber suction cups.
In further aspects, the actuation subassembly 205a, 205b, 505a, 505b of each nozzle assembly 208a, 208b, 508a, 508b can comprise at least one rotational actuator coupled to the vacuum nozzle. Optionally, in these aspects, the at least one rotational actuator of each actuation subassembly 205a, 205b, 505a, 505b can comprise a plurality of rotational actuators that are configured to effect rotational movement of the nozzle assembly 208a, 208b, 508a, 508b relative to a plurality of rotational axes, such as for example, and without limitation, two, three, four, five, six, or more axes. In further aspects, the actuation subassembly 205a, 205b, 505a, 505b of each nozzle assembly 208a, 208b, 508a, 508b can further comprise at least one axial actuator configured to effect axial movement of the vacuum nozzle of the nozzle assembly relative to at least one axis.
In various aspects, and with reference to
In the object-transfer position, as shown in
More generally, in further exemplary aspects, in the object-transfer position, it is contemplated that the longitudinal axes of the first and second vacuum nozzles 202a, 202b, 502a, 502b can be positioned in any orientation in which the distal ends 216a, 216b, 516a, 516b of the first and second vacuum nozzles are positioned sufficiently close from one another to permit the transfer of an object (e.g., embryo) from one vacuum nozzle to the other vacuum nozzle. In these aspects, it is contemplated that the longitudinal axes of the first and second vacuum nozzles 202a, 202b, 502a, 502b can be positioned parallel to the transverse axis 240 or at any desired acute angle relative to the transverse axis 240.
In exemplary aspects, and as shown in
Optionally, in exemplary aspects and as shown in
In further exemplary aspects, and with reference to
Optionally, in exemplary aspects, and as shown in
Alternatively, in other optional aspects, and as shown in
In one aspect, the first nozzle assembly 208a can comprise a first plate 220a that is secured to the vacuum nozzle 202a and at least one rotational actuator of the first nozzle assembly and rotationally coupled to the base assembly 206 such that rotation of the first plate effects a corresponding rotation of the vacuum nozzle. In this aspect, the second nozzle assembly 208b can comprise a second plate 220b that is secured to the vacuum nozzle 202b and at least one rotational actuator of the second nozzle assembly and rotationally coupled to the base assembly 206 such that rotation of the second plate effects a corresponding rotation of the second vacuum nozzle.
In another aspect, the base assembly 206 can comprise a transverse arm 244 and first and second nozzle assembly supports 242a, 242b that are slidably coupled to the transverse arm. In this aspect, the first plate 220a can be rotationally coupled to the first nozzle assembly support 242a, and the second plate 220b can be rotationally coupled to the second nozzle assembly support 242b. It is further contemplated that the first and second nozzle assembly supports 242a, 242b can be selectively and independently moveable relative to the transverse axis 240 to move the vacuum nozzles 202a, 202b of the first and second nozzle assemblies 208a, 208b relative to the transverse axis. In a further aspect, the object orientation apparatus 200, 500 can further comprise first and second transverse actuators respectively secured to the first and second nozzle assembly supports 242a, 242b. In this aspect, the at least one controller 800 can be configured to control movement of the first and second nozzle assembly supports 242a, 242b relative to the transverse axis 240.
Optionally, in various aspects, it is contemplated that the vacuum nozzles 202a, 202b can be slidably coupled to the first and second plates 220a, 220b to thereby permit axial movement of the vacuum nozzles. In these aspects, it is contemplated that the plates 220a, 220b can define respective slide elements 203a, 203b that are coupled to the vacuum nozzles and permit axial movement of the vacuum nozzles relative to the support plates. As shown in
In various exemplary aspects, the object orientation apparatus 200, 500 can further comprise at least one camera 107 positioned in communication with the at least one controller 800. In these aspects, the at least one camera 107 can be configured to produce at least one image of an object (e.g., embryo) retained by the vacuum nozzle 202a, 502a of the first nozzle assembly 208a, 508a. An exemplary side elevational view of an embryo held against the distal end of a vacuum nozzle is provided in
In various aspects, the object orientation apparatus can further comprise at least one vacuum source positioned in communication with the at least one controller 800 and the vacuum nozzles 202a, 202b, 502a, 502b of the first and second nozzle assemblies 208a, 208b, 508a, 508b. In these aspects, the at least one controller 800 can be configured to selectively and independently adjust the application of vacuum force to the vacuum nozzles 202a, 202b, 502a, 502b of the first and second nozzle assemblies 208a, 208b, 508a, 508b. In further aspects, the object orientation apparatus can further comprise at least one positive pressure source positioned in communication with the at least one controller 800 and the vacuum nozzles 202a, 202b, 502a, 502b of the first and second nozzle assemblies 208a, 208b, 508a, 508b. In these aspects, the at least one controller 800 can be configured to selectively and independently adjust the application of positive to the vacuum nozzles 202a, 202b, 502a, 502b of the first and second nozzle assemblies 208a, 208b, 508a, 508b.
In exemplary aspects, the disclosed object orientation apparatus 200, 500 can be used in a method for positioning an object (e.g., an embryo) in a desired orientation. In these aspects, the method can comprise selectively activating the actuation subassembly of the first nozzle assembly to position the vacuum nozzle of the first nozzle assembly in the object release/retrieval position. In another aspect, the method can comprise applying suction through the vacuum nozzle of the first nozzle assembly to retain an object (e.g., embryo) against the distal end of the vacuum nozzle. In a further aspect, the method can comprise producing an image of the object (e.g., embryo) using the camera. In still another aspect, the method can comprise determining an orientation of the object (e.g, embryo) using the controller.
In exemplary aspects, the method can further comprise using the controller to compare the orientation of the object (e.g., embryo) to a desired orientation of the object (e.g., embryo). In response to determining that the orientation of the object corresponds to the desired orientation, the controller can selectively activate at least one actuator of the actuation subassembly of the first nozzle assembly to return the first nozzle assembly to the object release/retrieval position. Optionally, with the first nozzle assembly in the object release/retrieval position, the controller can cause the vacuum source to cease application of suction. In conjunction with ceasing application of suction, the controller can also activate a positive pressure source to apply positive pressure through the vacuum nozzle of the first nozzle assembly to ensure that the object is detached from the distal end of the vacuum nozzle and delivered to a selected location, such as, for example, growth media. In response to determining that the orientation of the object (e.g., embryo) does not correspond to the desired orientation, the controller can selectively activate at least one actuator of the actuation subassemblies of the first and second nozzle assemblies to move the first and second nozzle assemblies to the object-transfer position. With the first and second nozzle assemblies in the object-transfer position, the controller can: activate a vacuum source to apply suction through the vacuum nozzle of the second nozzle assembly to retain the object (e.g., embryo) against the distal end of the vacuum nozzle of the second nozzle assembly; and activate a positive pressure source to apply positive pressure through the vacuum nozzle of the first nozzle assembly to detach the object from the distal end of the vacuum nozzle of the first nozzle assembly. More specifically, with the first and second nozzle assemblies in the object-transfer position and the object retained against the distal end of the first nozzle assembly, the controller can initially activate a vacuum source to apply negative pressure through the vacuum nozzle of the second nozzle assembly and also, either concurrently or shortly thereafter, cause a vacuum source to cease application of negative pressure through the first nozzle assembly. Next, the controller can activate a positive pressure source to apply positive pressure through the vacuum nozzle of the first nozzle assembly as the second nozzle assembly is moved away from the object-transfer position. It is contemplated that the positive pressure applied through the vacuum nozzle can be sufficient to completely eliminate any negative pressure within the vacuum tube and/or nozzle assembly while remaining low enough to avoid disturbance of objects (e.g., embryos) that have already been placed in a desired location (e.g., growth media) as further disclosed herein. With the object retained against the distal end of the vacuum nozzle of the second nozzle assembly, the controller can selectively activate at least one actuator of the actuation subassembly of the second nozzle assembly to move the second nozzle assembly to the object release/retrieval position. With the second nozzle assembly in the object release/retrieval position, the controller can cause the vacuum source to cease application of suction. In conjunction with ceasing application of suction, the controller can also activate a positive pressure source to apply positive pressure through the vacuum nozzle of the first nozzle assembly to ensure that the object is detached from the distal end of the vacuum nozzle and delivered to a selected location, such as, for example, growth media.
In exemplary aspects, and with reference to
In exemplary aspects, and with reference to
In exemplary aspects, the petri dish can contain selection media, such as, for example and without limitation, a selection medium useful in a conventional doubled haploid process. In these aspects, it is contemplated that the double haploid process can optionally be used in conjunction with plant breeding process as are known in the art. Optionally, the selection medium can comprise an antimitoticor chromosome doubling agent (e.g., colchicine, oryzalin, or trifluralin) as is known in the art. It is contemplated that the placement of an embryo in the doubling media can cause the doubling of the chromosomes of the embryo. After identification of the doubled haploids using conventional camera and visualization systems, the doubled haploids can be selectively transferred from the petri dish to a growth container (e.g., a STERIVENT tray assembly) as disclosed herein, and germination can begin.
Following removal of the lid of a selected petri dish (in the case of embryos plated on a petri dish) or following singulation (in the case of embryos positioned on the screen of a simulation apparatus), the at least one controller 800 can determine the locations of the embryos that are to be transferred to a second location (e.g., a culture container) and selectively control movement of the first nozzle assembly to engage a selected embryo. Following engagement with the selected embryo, the at least one controller can determine the orientation of the engaged embryo and transfer the engaged embryo to a second nozzle assembly (
All publications and patent applications mentioned in the specification are indicative of the level of those skilled in the art to which this invention pertains. All publications and patent applications are herein incorporated by reference to the same extent as if each individual publication or patent application was specifically and individually indicated to be incorporated by reference.
Although the foregoing invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, certain changes and modifications may be practiced within the scope of the appended claims.
Filing Document | Filing Date | Country | Kind |
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PCT/US17/27924 | 4/17/2017 | WO | 00 |
Number | Date | Country | |
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62332646 | May 2016 | US |