TCA CYCLE INTERMEDIATES AND METHODS OF USE THEREOF

Abstract
The invention generally relates to non-oral formulations of TCA cycle intermediates and methods of using such formulations for treating metabolic disorders. In certain embodiments, the invention provides therapeutic compositions containing succinate formulated for non-oral administration and methods of using such compositions to treat metabolic disorders. The invention also provides combination therapies that include compositions containing succinate formulated for non-oral administration and compositions containing citrate (optionally formulated for oral administration) and methods of using such combination therapies to treat metabolic disorders.
Description
FIELD OF THE INVENTION

The invention generally relates to TCA cycle intermediates and methods of using such compositions for treating metabolic disorders.


BACKGROUND

Inherited metabolic disorders, such as propionic acidemia (PA) and methylmalonic acidemia (MMA), cause a variety of life-threatening symptoms, including seizures, strokes, and damage to the brain, heart, and liver. PA and MMA result from enzymatic deficiencies that impair the body's ability to convert certain fats and amino acids into succinate, an intermediate in the tricarboxylic acid (TCA) cycle. Consequently, individuals with PA or MMA must maintain a low-protein diet for their entire lives, and in some patients, even strict adherence to the diet fails to prevent neurological damage and other symptoms.


Efforts to treat afflicted individuals by providing additional succinate have failed. Unadulterated succinate is poorly bioavailable, so providing succinate in quantities sufficient to remedy metabolic disorders is difficult. Thus, despite our understanding of the molecular basis of metabolic disorders like PA and MMA, these genetic disorders remain highly debilitating and often fatal.


SUMMARY

The invention overcomes the challenge of delivering succinate at doses therapeutically effective to treat metabolic disorders such as PA and MMA by providing combination therapies that include multiple intermediates of the TCA cycle. By providing two or more TCA cycle intermediates to a subject, compositions and methods of the invention rely on the body's natural metabolism pathways to restore levels of succinate and allow delivery of a larger bolus of succinate than is possible with a single agent. In addition, because the compositions can provide various TCA cycle intermediates, they are useful in treating a broad spectrum of metabolic diseases, disorders, and conditions. For example, combinations of succinate and citrate are useful for treating PA and MMA, but other combinations may be used to treat different conditions.


The use of multiple TCA cycle intermediates allows flexibility in the formulation and administration of the compositions of the invention. Each TCA cycle intermediate may independently be provided to the subject by the optimal route of administration for the particular form of the intermediate. Thus, succinate-containing combinations may include non-oral delivery of succinate salts or oral delivery of succinate derivatives that have improved bioavailability. Moreover, in succinate-citrate combinations, both intermediates may be given orally, both may be given non-orally, or one may be given orally and the other may be given non-orally.


The invention also provides succinate-containing compositions formulated for non-oral administration. The compositions, which include formulations for subcutaneous or intravenous administration, have superior bioavailability to oral formulations. The non-oral formulations of succinate may be used in the combination therapies of the invention.


Compositions containing succinate or other TCA cycle intermediates can be readily administered to infants, including newborns. Many metabolic disorders such as PA and MMA are due to genetic defects, so the consequences of errant metabolism become manifest at birth when the child no longer has access to a nutritional supply from the mother. Therefore, early intervention is necessary to rectify metabolic imbalances before they lead to permanent symptoms. Because the invention provides succinate-containing compositions formulated for non-oral administration, such compositions do not require active suckling from the baby to deliver therapeutically effective doses of succinate. Consequently, treatment of infants can begin immediately to help prevent development of disease symptoms.


In an aspect, the invention provides compositions containing one or more TCA cycle intermediates or prodrugs, analogs, or derivatives thereof formulated for non-oral administration. The TCA cycle intermediate may be citrate, isocitrate, alpha-ketoglutarate, succinyl-coenzyme A, succinate, fumarate, malate, or oxaloacetate. Preferably, the TCA cycle intermediate is succinate.


In another aspect, the invention provides methods of treating a condition associated with altered TCA cycle metabolism in a subject. The methods include providing to a subject having a condition associated with altered TCA cycle metabolism a composition comprising one or more TCA cycle intermediates or prodrugs, analogs, or derivatives thereof formulated for non-oral administration. Preferably, the TCA cycle intermediate is succinate.


The composition may be formulated for administration by any non-oral route. For example, the composition may be formulated for injection or infusion. The injection or infusion may be subcutaneous, intravenous, intraarterial, or intramuscular. The composition may be formulated for non-oral enteral administration, such as rectal administration.


The composition may include a buffering agent that maintains a neutral or near-neutral pH of the composition. For example, the buffering agent may be present in amount sufficient to buffer the pH of the composition to from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0.


The TCA cycle intermediate may be provided at any therapeutically effective dose. For example, the TCA cycle intermediate may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 5 g/kg subject weight, from about 0.5 mg/kg subject weight to about 5 g/kg subject weight, from about 1 mg/kg subject weight to about 5 g/kg subject weight, from about 2 mg/kg subject weight to about 5 g/kg subject weight, from about 5 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 2 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 2 g/kg subject weight, from about 1 mg/kg subject weight to about 2 g/kg subject weight, from about 2 mg/kg subject weight to about 2 g/kg subject weight, from about 5 mg/kg subject weight to about 2 g/kg subject weight, from about 0.1 mg/kg subject weight to about 1 g/kg subject weight, from about 0.2 mg/kg subject weight to about 1 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 1 g/kg subject weight, from about 2 mg/kg subject weight to about 1 g/kg subject weight, from about 5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


The condition may be any disease, disorder, or condition associated with altered TCA cycle metabolism. For example, the condition may be a disorder related to POLG mutation, an energetic disorder, glutaric acidemia type 1 or type 2, a long chain fatty acid oxidation disorder, methylmalonic acidemia (MMA), a mitochondrial associated disease, a mitochondrial encephalomyopathy lactic acidosis and stroke-like syndrome (MELAS), myoclonic epilepsy and ragged-red fibers (MERRF), mitochondrial myopathy, a mitochondrial respiratory chain deficiency, muscular dystrophy (e.g., Duchenne's muscular dystrophy and Becker's muscular dystrophy), a neurologic disorder, a pain or fatigue disease, propionic acidemia (PA), pyruvate carboxylase deficiency, refractory epilepsy, or succinyl CoA lyase deficiency. Preferably, the condition is MMA or PA.


In another aspect, the invention provides combination therapies for treating a condition associated with altered TCA cycle metabolism in a subject. The combination therapies include a non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and a formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid.


In another aspect, the invention provides methods of treating a condition associated with altered TCA cycle metabolism in a subject. The methods include providing to a subject having a condition associated with altered TCA cycle metabolism a combination therapy including a non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and a formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid.


The non-oral formulation containing succinate or a prodrug, analog, or derivative thereof may be formulated for administration by any non-oral means, as described above.


The non-oral formulation containing succinate or a prodrug, analog, or derivative thereof may contain a buffering agent, as described above.


The non-oral formulation containing succinate or a prodrug, analog, or derivative thereof may be provided at any therapeutically effective dose. For example, succinate or a prodrug, analog, or derivative thereof may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


The formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be formulated for administration by any suitable means. For example, the formulation may be formulated for oral, enteral, parenteral, subcutaneous, intravenous, intraarterial, or intramuscular administration. Preferably, the formulation is formulated for oral administration.


The formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may contain a buffering agent. For example, the buffering agent may be present in amount sufficient to buffer the pH of the composition to from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0. The buffering agent may be an amino acid or a metal ion. The amino acid may be a natural or non-natural amino acid. The amino acid may be lysine, ornithine, or a derivative thereof.


The formulation containing citrate or a prodrug, analog, or derivative thereof may be provided at any therapeutically effective dose. For example, citrate or a prodrug, analog, or derivative thereof may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


The non-oral formulation containing succinate or a prodrug, analog, or derivative thereof, the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid, or both may be provided in multiple doses per day. For example, one or more of the formulations may be provided in 2, 3, 4, 5, 6, or more doses per day.


The non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and the formulation containing citrate, citric acid, or a prodrug, analog, or derivative thereof may be provided simultaneously, sequentially in either order, or in an alternating manner. Sequential administration or alternating administration may include providing the non-oral formulation containing succinate or a prodrug, analog, or derivative thereof exclusively for a period of time and providing the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid exclusively for a period of time. Sequential administration may include an period of overlap in which the subject is provided both the non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid. The periods of exclusivity and periods of overlap may independently be 1 day, 2 days, 3 days, 4 days, 5 days, 6 days, 1 week, 2 weeks, 3 weeks, 4 weeks, 6 weeks, 8 weeks, 12 weeks, 3 months, 4 months, 5 months, 6 months, 8 months, 10 months, 12 months, 18 months, or 24 months.


The condition may be any disease, disorder, or condition associated with altered TCA cycle metabolism, as described above.


In another aspect, the invention provides compositions that include a nutritional source for infants, such as baby formula or human breast milk; a non-salt form of citric acid or a prodrug, analog, or derivative thereof; and a buffering agent in an amount to buffer a pH of the composition from about 3.0 to about 8.0.


The buffering agent may be present in amount sufficient to buffer the pH of the composition to from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0. The buffering agent may be an amino acid or a metal ion. The amino acid may be a natural or non-natural amino acid. The amino acid may be lysine, ornithine, or a derivative thereof.


In another aspect, the invention provides methods of treating a condition associated with altered TCA cycle metabolism in a subject. The methods include providing to a subject having a condition associated with altered TCA cycle metabolism an oral formulation containing citrate and a buffering agent in an amount to buffer a pH of the composition from about 3.0 to about 8.0.


The buffering agent may be present in amount sufficient to buffer the pH of the composition to from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0. The buffering agent may be an amino acid or a metal ion. The amino acid may be a natural or non-natural amino acid. The amino acid may be lysine, ornithine, or a derivative thereof.


The condition may be any disease, disorder, or condition associated with altered TCA cycle metabolism, as described above. The subject may be human. The human may be a child. For example, the child may be less than 18 years in age, less than 12 years in age, less than 10 years in age, less than 8 years in age, less than 6 years in age, less than 5 years in age, less than 4 years in age, less than 3 years in age, less than 2 years in age, or less than 1 year in age. In another aspect, the invention provides methods of treating or preventing Leber's hereditary optic neuropathy in a subject. The methods include providing a subject having or at risk of developing Leber's hereditary optic neuropathy a non-oral formulation containing succinate or a prodrug, analog, or derivative thereof.


The non-oral formulation may be provided intraocularly. The non-oral formulation may be provided systemically. For example, the non-oral formulation may be provided intravenously or subcutaneously.


The non-oral formulation may include a buffering agent that maintains a neutral or near-neutral pH of the composition. For example, the buffering agent may be present in amount sufficient to buffer the pH of the composition to from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0.


The methods of treating or preventing Leber's hereditary optic neuropathy in a subject may include providing a formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid. The non-oral formulation and the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be a single formulation. Alternatively, the non-oral formulation and the formulation containing citrate, citric acid, or a prodrug, analog, or derivative thereof may be separate formulations.


The formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be provided by any route of administration. For example, the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be provided orally, intraocularly, subcutaneously, or intravenously.


The formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may contain a buffering agent. For example, the buffering agent may be present in amount sufficient to buffer the pH of the composition to from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0. The buffering agent may be an amino acid or a metal ion. The amino acid may be a natural or non-natural amino acid. The amino acid may be lysine, ornithine, or a derivative thereof.


The non-oral formulation containing succinate or a prodrug, analog, or derivative thereof, the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid, or both may be provided in multiple doses per day. For example, one or more of the formulations may be provided in 2, 3, 4, 5, 6, or more doses per day.


In another aspect, the invention provides formulations that contain citric acid, or a prodrug, analog, derivative thereof; one or more citrate salts, or a prodrug, analog, or derivative thereof; and an amino acid buffering agent.


The citrate salts may include monosodium citrate or monopotassium citrate.


The amino acid buffering agent may be lysine or ornithine.


The formulation may contain a sugar. The sugar may be sucrose, fructose, galactose, maltose, or lactose.


The formulation may be a powder that is soluble in an aqueous medium. The formulation may be an aqueous solution.


The formulation, or the soluble components within the formulation, may contain citric acid, monosodium citrate, monopotassium citrate, lysine, and sucrose. The formulation may contain, by mass, from about 40% to about 60% citric acid; from about 1% to about 10% monosodium citrate; from about 0.1% to about 5% monopotassium citrate; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 49.2% citric acid, about 2% monosodium citrate, about 0.3% monopotassium citrate, about 37.5% lysine, and about 11% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 44.2% citric acid, about 8.3% monosodium citrate, about 2.3% monopotassium citrate, about 33.8% lysine, and about 11.5% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, from about 50% to about 60% citrate, citric acid, or a combination thereof; from about 0.2% to about 1% sodium; from about 0.02% to about 0.5% potassium; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose.


The formulation may be suitable for oral administration.


The formulation may be given to a subject to treat or prevent a condition associated with altered TCA cycle metabolism, such as any of those described above.


In another aspect, the invention provides a formulation including citric acid, or a prodrug, analog, derivative thereof; at least one citrate salt, or a prodrug, analog, or derivative thereof; and an amino acid. The formulation may include citric acid and at least one citrate salt, for example, the at least one citrate salt may be selected from the group consisting of monosodium citrate and monopotassium citrate. In other embodiments, the formulation may be citric acid and at least two citrate salts, for example, the at least two citrate salts may be monosodium citrate and monopotassium citrate.


The formulation may include any natural or non-natural amino acid. In certain embodiments, the amino acid is a cationic amino acid, such as lysine or arginine. The formulation may include other components, such as a sugar, for example sucrose.


The formulation may be provided by any route of administration, and a preferable route is oral. An exemplary oral formulation is a powder that is soluble in an aqueous medium. In a particular embodiment, the formulation includes citric acid, monosodium citrate, monopotassium citrate, sucrose, and one or more of lysine and arginine.


Other aspects of the invention provide methods of treating a condition associated with altered TCA cycle metabolism in a subject. Such methods may involve providing to a subject having a condition associated with altered TCA cycle metabolism a formulation comprising (i) citric acid, or a prodrug, analog, derivative thereof; (ii) at least one citrate salt, or a prodrug, analog, or derivative thereof; and (iii) an amino acid, wherein a therapeutic effect is achieved in the subject by activity of a combination of two or more of components (i), (ii), and (iii) in the formulation. In certain embodiments, the amino acid is incorporated into the TCA cycle of the subject and contributes to the therapeutic effect that is achieved in the subject.


Exemplary conditions include a disorder related to POLG mutation, an energetic disorder, glutaric acidemia type 1 or type 2, a long chain fatty acid oxidation disorder, methylmalonic acidemia (MMA), a mitochondrial associated disease, a mitochondrial encephalomyopathy lactic acidosis and stroke-like syndrome (MELAS), myoclonic epilepsy and ragged-red fibers (MERRF), mitochondrial myopathy, a mitochondrial respiratory chain deficiency, muscular dystrophy (e.g., Duchenne's muscular dystrophy and Becker's muscular dystrophy), a neurologic disorder, a pain or fatigue disease, propionic acidemia (PA), pyruvate carboxylase deficiency, refractory epilepsy, or succinyl CoA lyase deficiency.


The formulation may include citric acid and at least one citrate salt, for example, the at least one citrate salt may be selected from the group consisting of monosodium citrate and monopotassium citrate. In other embodiments, the formulation may be citric acid and at least two citrate salts, for example, the at least two citrate salts may be monosodium citrate and monopotassium citrate.


The formulation may include any natural or non-natural amino acid. In certain embodiments, the amino acid is a cationic amino acid, such as lysine or arginine. The formulation may include other components, such as a sugar, for example sucrose.


The formulation may be provided by any route of administration, and a preferable route is oral. An exemplary oral formulation is a powder that is soluble in an aqueous medium. In a particular embodiment, the formulation includes citric acid, monosodium citrate, monopotassium citrate, sucrose, and one or more of lysine and arginine. The formulation may be provided in one or multiple doses per day. For example, one or more of the formulations may be provided in 1, 2, 3, 4, 5, 6, or more doses per day.


The formulation containing citrate or a prodrug, analog, or derivative thereof may be provided at any therapeutically effective dose. For example, citrate or a prodrug, analog, or derivative thereof may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


The formulation, or the soluble components within the formulation, may contain citric acid, monosodium citrate, monopotassium citrate, lysine, and sucrose. The formulation may contain, by mass, from about 40% to about 60% citric acid; from about 1% to about 10% monosodium citrate; from about 0.1% to about 5% monopotassium citrate; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 49.2% citric acid, about 2% monosodium citrate, about 0.3% monopotassium citrate, about 37.5% lysine, and about 11% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 44.2% citric acid, about 8.3% monosodium citrate, about 2.3% monopotassium citrate, about 33.8% lysine, and about 11.5% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, from about 50% to about 60% citrate, citric acid, or a combination thereof; from about 0.2% to about 1% sodium; from about 0.02% to about 0.5% potassium; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after subcutaneous administration of 13C4-succinate at 10 mg/kg.



FIG. 2 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after subcutaneous administration of 13C4-succinate at 10 mg/kg.



FIG. 3 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after subcutaneous administration of 13C4-succinate at 50 mg/kg.



FIG. 4 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after subcutaneous administration of 13C4-succinate at 50 mg/kg.



FIG. 5 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after subcutaneous administration of 13C4-succinate at 100 mg/kg.



FIG. 6 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after subcutaneous administration of 13C4-succinate at 100 mg/kg.



FIG. 7 is graph showing the effects of citrate and succinate on basal respiration in cells from a patient with propionic acidemia (PA).



FIG. 8 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after intravenous administration of 13C4-succinate at 10 mg/kg.



FIG. 9 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after intravenous administration of 13C4-succinate at 10 mg/kg.



FIG. 10 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after oral administration of 13C4-succinate at 50 mg/kg.



FIG. 11 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after oral administration of 13C4-succinate at 50 mg/kg.



FIG. 12 is a graph of plasma concentration of 13C6-citrate at various time points in individual rats after intravenous administration of 13C6-citrate at 10 mg/kg.



FIG. 13 is a graph of average plasma concentration of 13C6-citrate at various time points in rats after intravenous administration of 13C6-citrate at 10 mg/kg.



FIG. 14 is a graph of plasma concentration of 13C6-Citrate at various time points in individual rats after oral administration of 13C6-Citrate at 50 mg/kg.



FIG. 15 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after oral administration of 13C6-Citrate at 50 mg/kg.





DETAILED DESCRIPTION

The invention provides compositions and methods that allow efficient delivery of intermediates of the TCA cycle for treatment of metabolic disorders. In particular, the compositions and methods of the invention enable delivery of succinate by subcutaneous or intravenous administration. Synthesis of succinate is defective in propionic acidemia and methylmalonic acidemia, and the errant metabolism in patients with these disorders lead to a variety of potentially fatal effects, such as neurological damage, cardiomyopathy, and infections. The non-oral formulations of succinate permit delivery of the compound with much higher bioavailability that can be achieved with prior oral succinate formulations. Consequently, the non-oral formulations provide succinate at sufficient levels to prevent serious, long-term effects of defective TCA cycle metabolism.


The invention also provides combination therapies that include non-oral formulations of succinate and oral formulations of citrate, another intermediate of the TCA cycle. In contrast to succinate, citrate can administered orally at therapeutically effective doses. The combination therapies thus provide delivery of different TCA cycle intermediates by different means. The non-oral formulation of succinate and oral formulation of citrate may be provided sequentially or simultaneously. Sequential combination therapies allow patients, particularly infants, to transition from non-oral therapies to oral administration when they become old enough to ingest citrate in therapeutically effective quantities. Such therapies allow early intervention in newborns while permitting long-term care that can be administered without a health-care professional. Simultaneous combination therapies are useful when clinical issues, such as vomiting, skin rashes, etc., limit the amount of intermediate that can be delivered by either mode of administration.


TCA Cycle and Associated Disorders

The TCA cycle is illustrated below:




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Abnormal TCA cycle metabolism is associated with a variety of conditions. In hereditary metabolic disorders of the TCA cycle, such as 2-oxoglutaric aciduria, fumarase deficiency, and succinyl-CoA synthetase deficiency, genetic mutations affect enzymes of the TCA cycle or enzymes that catalyze related reactions. Consequently, individual reactions of the TCA cycle are impaired, leading to the depletion of intermediates required for the cycle to proceed. Such diseases typically present early with severe symptoms, such as mental retardation, microcephaly, deafness, and hypotonia and are often fatal in early childhood.


Other metabolic disorders affect pathways in which other metabolites, such as fatty acids and amino acids, are converted into intermediates of the TCA cycle. For example, propionyl-CoA is generated by oxidation of odd-chain fatty acids and breakdown of the amino acids isoleucine, valine, threonine, and methionine and is then converted to succinyl-CoA. The conversion of propionyl-CoA to succinyl-CoA involves the following sequence of reactions:




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Propionic acidemia (PA) results from a deficiency in propionyl-CoA carboxylase. In patients with PA, excess propionyl-CoA is converted to propionic acid, which accumulates in the bloodstream. In an analogous manner, methylmalonic acidemia (MMA) results from a deficiency in methylmalonyl CoA mutase. In patients with MMA, excess methylmalonyl-CoA is converted to methylmalonic acid, which accumulates in the bloodstream. In both PA and MMA, the high levels of acid in the blood lead to a variety of potentially fatal effects, such as organ damage, stroke, and seizure.


Treatment of PA and MMA focuses on dietary management to avoid amino acids that trigger acid accumulation. Consequently, patients with PA or MMA must strictly adhere to a low-protein diet to minimize their intake of triggering amino acids. The restricted intake of amino acids in patients with PA or MMA often leads to a shortage of L-carnitine, a quaternary ammonium compound involved in transport of fatty acids across the mitochondrial membrane. Consequently, patients with PA or MMA typically receive supplemental L-carnitine. The low-protein diet of infants with PA or MMA also puts them at risk for bacterial infections, so they may be given antibiotics prophylactically.


PA and MMA are autosomal recessive genetic disorders. Homozygous mutations in either of PCCA or PCCB, the genes that encode propionyl-CoA carboxylase, cause PA. MMA can result from homozygous mutations in MUT, which encodes methylmalonyl-CoA mutase. Methylmalonyl-CoA mutase requires vitamin B12 as a cofactor, and mutations in genes involved in vitamin B12 metabolism, such as LMBRD1, MCEE, MMAA, MMAB, MMACHC, and MMADHC, can also cause MMA. A dietary deficiency of vitamin B12 can also lead to MMA.


Abnormal TCA cycle metabolism is also observed in other diseases that do not have direct genetic links to this metabolic pathway. For example, altered TCA metabolism is observed in neurodegenerative disorders, such as Amyotrophic Lateral Sclerosis, Alzheimer's disease, Parkinson's disease, or Huntington's disease, and in a wide variety of cancers. Although the symptoms this diverse set of diseases vary, in many cases decreased activity of specific TCA enzymes or decreased mitochondrial ATP production has been observed, and it is believed that boosting levels of TCA cycle intermediates would mitigate the symptoms and improve prognoses.


The invention provides methods for treating any disease, disorder, or condition associated with altered TCA cycle metabolism or that can be ameliorated by providing an intermediate of the TCA cycle. The condition may be an inherited disorder, such as PA, MMA, 2-oxoglutaric aciduria, fumarase deficiency, or succinyl-CoA synthetase deficiency. The condition may be a neurodegenerative disorder, such as Amyotrophic Lateral Sclerosis, Alzheimer's disease, Parkinson's disease, or Huntington's disease. The condition may be a cancer, such as pancreatic cancer, kidney cancer, cervical cancer, prostate cancer, muscle cancer, gastric cancer, colon cancer, glioblastoma, glioma, paraganglioma, leukemia, liver cancer, breast cancer, carcinoma, and neuroblastoma.


Additional metabolic diseases, disorders, or conditions that can be treated with compositions or methods of the invention include acute angina, acute kidney injury, acute starvation, adrenoleukodystrophy (ALD), adrenomyeloneuropathy (AMN), an age-associated disease, Alpers disease (progressive infantile poliodystrophy), Alzheimer's disease, amyotrophic lateral sclerosis (ALS), atrial fibrillation, autism and autism spectrum disorders (ASD), Barth syndrome (lethal infantile cardiomyopathy), beta-oxidation defects, bioenergetic metabolism deficiency, bipolar disorder, carnitine-acyl-carnitine deficiency, carnitine deficiency, carnitine palmitoyltransferase I (CPT I) deficiency, carnitine palmitoyltransferase II (CPT II) deficiency, a cerebral vascular accident, chronic progressive external ophthalmoplegia syndrome) (CPEO), coenzyme Q10 deficiency, complex I deficiency (NADH dehydrogenase (NADH¬CoQ reductase) deficiency), complex II deficiency (succinate dehydrogenase deficiency), complex III deficiency (ubiquinone-cytochrome c oxidoreductase deficiency, complex IV deficiency/COX deficiency, complex V deficiency (ATP synthase deficiency), coronary occlusion, COX deficiency, creatine deficiency syndromes (e.g., cerebral creatine deficiency syndromes (CCDS), guanidinoaceteate methyltransferase deficiency (GAMT deficiency), L-arginine: glycine amidinotransferase deficiency (AGAT deficiency), and SLC6A8-related creatine transporter deficiency (SLC6A8 deficiency)), diabetes, disorders related to POLG mutations, endotoxemia, an energetic disorder, epilepsy, Friedreich's ataxia (FRDA or FA), glutaric aciduria type II, Huntington's disease, hypoxia, ischemia, Kearns-Sayre syndrome (KSS), lactic acidosis, long-chain acyl-CoA dehydrogenase deficiency) (LCAD, VLCAD, VLCADD), long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency (LCHAD), Leigh disease or syndrome (subacute necrotizing encephalomyelopathy), Leber's hereditary optic neuropathy (LHON), Luft disease, macular degeneration, male infertility, medium-chain acyl-CoA dehydrogenase deficiency (MCAD), mitochondrial associated disease, mitochondrial cytopathy, mitochondrial encephalomyopathy lactic acidosis and stroke-like syndrome (MELAS), mitochondrial encephalopathy (including encephalomyopathy, encephalomyelopathy), mitochondrial DNA depletion, mitochondrial myopathy, mitochondrial recessive ataxia syndrome (MIRAS), mitochondrial respiratory chain deficiency, multiple organ dysfunction syndrome, mood disorders, motor neuron diseases, muscular dystrophy (e.g., Duchenne's muscular dystrophy and Becker's muscular dystrophy), myocardial infarction, myoclonic epilepsy and ragged-red fibers (MERRF), myoneurogastointestinal disorder and encephalopathy (MNGIE), neuropathy, ataxia, and retinitis pigmentosa (NARP), neurodegenerative disorders associated with Parkinson's, Pearson syndrome, pyruvate carboxylase deficiency, pyruvate dehydrogenase deficiency, refractory epilepsy, renal tubular acidosis, respiratory chain deficiencies, schizophrenia, sepsis, short-chain acyl-CoA dehydrogenase deficiency (SCAD), short-chain hydroxyacyl-CoA dehydrogenase deficiency (SCHAD, SCHADD), stroke, succinyl CoA lyase deficiency, systemic inflammatory response syndrome, and very long-chain acyl-CoA dehydrogenase deficiency (VLCAD).


The disease, disorder, or condition may be secondary to, or associated with another disease, disorder, or condition. For example, the disease disorder or condition may be associated with cardiac disease, a gastrointestinal disorder, ischemia reperfusion injury, intoxication, liver disease, loss of motor control, muscle weakness and pain, mutations in the mitochondrial genome, a neurologic disease, disorder or condition, pain or fatigue disease, seizures, sensineural hearing loss, swallowing difficulties, tinnitus, or visual/hearing problems.


Diseases, disorders, and conditions associated with altered TCA cycle metabolism often affect organs, tissues, and systems that have high energy demands, such as the brain, cochlea, endocrine system, heart, kidney, liver, respiratory system, retina, and skeletal muscles. Thus, the compositions and methods of the invention may be used to treat diseases, disorders, or conditions that affect one or more of these organs, tissues, or systems.


Another clinically important metabolic pathway is the mitochondrial electron transport chain. The electron transport chain uses a complex series of redox reactions to create a proton gradient across the mitochondrial inner membrane, and the chemiosmotic potential from the proton gradient is used to drive adenosine triphosphate (ATP) synthesis. The electron transport chain involves four enzymatic complexes in the mitochondrial inner membrane: NADH dehydrogenase, also called respiratory complex I; succinate dehydrogenase, also called respiratory complex II; coenzyme Q:cytochrome c reductase, also called respiratory complex III; and cytochrome c oxidase, also called respiratory complex IV. Electrons enter the transport chain in either of two ways. First, NADH dehydrogenase may transfer electrons from NADH to ubiquinone, the first intermediate electron carrier in the chain. Alternatively, electrons from succinate may be transferred to ubiquinone by succinate dehydrogenase. In the next step of the electron transport chain, electrons are transferred from ubiquinone to cytochrome c, the second intermediate electron carrier, by coenzyme Q:cytochrome c reductase. In the final step, cytochrome c oxidase transfers electrons from cytochrome c to molecular oxygen to form water, the net product of electron transport. Succinate dehydrogenase is the only enzyme that participates in both the TCA cycle and the electron transport chain.


Leber's hereditary optic neuropathy (LHON) is a retinal degenerative condition caused by defects in the electron transport chain. LHON results from mutations in mitochondrial genes that encode components of NADH dehydrogenase, such as MT-ND1, MT-ND4, MT-ND4L, and MT-ND6. Because mutations that cause LHON are encoded by genes in the mitochondrial genome, which is transmitted to the embryo from the egg but not from the sperm, LHON can only be inherited maternally.


An insight of the invention is that succinate is useful for treatment of LHON. Due to reduced NADH dehydrogenase activity, electron transport and ATP synthesis are decreased in patients with LHON. In particular, formation of ubiquinone, the first intermediate electron carrier in the chain, is diminished. However, electron transport activity can be restored by providing supplemental succinate, which can donate electrons to form ubiquinone via succinate dehydrogenase. Thus, providing additional succinate to serve as electron donor for the electron transport chain in patients with LHON compensates for the insufficiency of electron transfer from NADH.


Compositions Containing TCA Cycle Intermediates

The invention provides compositions that contain one or more TCA cycle intermediates or prodrugs, analogs, or derivatives thereof formulated for non-oral administration. For example and without limitation, the TCA cycle intermediate or prodrug, analog, or derivative thereof may be citrate, cis-aconitate, D-isocitrate, α-ketoglutarate, succinate, fumarate, malate, oxaloacetate, acetone, acetoacetate, β-hydroxybutyrate, β-ketopentanoate, or β-hydroxypentanoate. Preferably, the TCA cycle intermediate is succinate. The TCA cycle intermediate or prodrug, analog, or derivative thereof may be provided as a free acid, salt, or a non-salt form.


The compositions containing one or more TCA cycle intermediates or prodrugs, analogs, or derivatives thereof may be formulated for administration by any non-oral route. For example and without limitations, the compositions may be formulated for subcutaneous, intravenous, intraarterial, intramuscular, intradermal, or rectal administration. Preferably, the compositions are formulated for intravenous or subcutaneous administration.


A prodrug is a medication or compound that, after administration, is metabolized (i.e., converted within the body) into a pharmacologically active drug. The prodrug itself may be pharmacologically inactive. Prodrugs may be used to improve how a medicine is absorbed, distributed, metabolized, and excreted. The prodrug may improve the bioavailability of the active drug when the active drug is poorly absorbed from the gastrointestinal tract. The prodrug may improve how selectively the drug interacts with cells or processes that are not its intended target, thereby reducing unintended and undesirable side effects. The prodrug may be converted into a biologically active form (bioactivated) inside cells (a Type I prodrug) or outside cells (a Type II prodrug). The prodrug may bioactivated in the gastrointestinal tract, in systemic circulation, in metabolic tissue other than the target tissue, or in the target tissue.


TCA cycle intermediates or prodrugs, analogs, or derivatives thereof may be provided as pharmaceutically acceptable salts, such as nontoxic acid addition salts, which are salts of an amino group formed with inorganic acids such as hydrochloric acid, hydrobromic acid, phosphoric acid, sulfuric acid and perchloric acid or with organic acids such as acetic acid, maleic acid, tartaric acid, citric acid, succinic acid or malonic acid or by using other methods used in the art such as ion exchange. In some embodiments, pharmaceutically acceptable salts include, but are not limited to, adipate, alginate, ascorbate, aspartate, benzenesulfonate, benzoate, bisulfate, borate, butyrate, camphorate, camphor sulfonate, citrate, cyclopentanepropionate, digluconate, dodecylsulfate, ethanesulfonate, formate, fumarate, glucoheptonate, glycerophosphate, gluconate, hemisulfate, heptanoate, hexanoate, hydroiodide, 2-hydroxy-ethanesulfonate, lactobionate, lactate, laurate, lauryl sulfate, malate, maleate, malonate, methanesulfonate, 2-naphthalenesulfonate, nicotinate, nitrate, oleate, oxalate, palmitate, pamoate, pectinate, persulfate, 3-phenylpropionate, phosphate, picrate, pivalate, propionate, stearate, succinate, sulfate, tartrate, thiocyanate, p-toluenesulfonate, undecanoate, valerate salts, and the like. Representative alkali or alkaline earth metal salts include sodium, lithium, potassium, calcium, magnesium, and the like. In some embodiments, a pharmaceutically acceptable salt is an alkali salt. In some embodiments, a pharmaceutically acceptable salt is a sodium salt. In some embodiments, a pharmaceutically acceptable salt is an alkaline earth metal salt. In some embodiments, pharmaceutically acceptable salts include, when appropriate, nontoxic ammonium, quaternary ammonium, and amine cations formed using counter ions such as halide, hydroxide, carboxylate, sulfate, phosphate, nitrate, alkyl having from 1 to 6 carbon atoms, sulfonate and aryl sulfonate.


Prodrugs of succinate are known in the art and described in, for example, International Publication Nos. WO 1997/047584, WO 2014/053857, WO 2015/155230, WO 2015/155231, WO/2015/155238, WO 2017/060400, WO 2017/060418, and WO 2017/060422; European Patent Publication Nos. EP 2903609, EP 3129016, EP 3129364, EP 3129058, and EP 3391941; and U.S. Patent Publication Nos. US 2017/0100359, US 2017/0105960, and US 2017/0105961, the contents of each of which are incorporated herein by reference. Representative compounds from these documents are provided below.


Compounds of formulas (I) and (IA):




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or a pharmaceutically acceptable salt thereof, wherein the dotted bond between A and B denotes an optional bond so as to form a ring closed structure,


and wherein


when the formula is Formula (I), Z is selected from —CH2— (e.g., derived from malonic acid), —CH2—CH2—CH2 (e.g., derived from glutaric acid), —CH═CH2— (e.g., derived from fumaric acid), —CH2—CH(OH)— (e.g., derived from malic acid), —CH(OH)—CH2— (e.g., derived from malic acid), CH2C(OH)(COOH)—CH2— (e.g., derived from citric acid), —C(O)—CH2—CH2— (e.g., derived from alphaketoglutaric acid), —CH2—CH2—C(O)— (e.g., derived from alpha-ketoglutaric acid), —CH2—C(COC(OH)—C(COOH)—CHOH)═CH— (e.g., derived from aconitic acid), —CH═C(COOH)—CH2— (e.g., derived from aconitic acid), —CH(OH)—CH(COOH)—CH2— (e.g., derived from isocitric acid), —CH2—CH(COOH)—CH(OH)— (e.g., derived from isocitric acid), —CH2—CH(COOH)—C(═O)— (e.g., derived from oxalosuccinic acid), —C(═O)—CH(COOH)—CH2— (e.g., derived from oxalosuccinic acid), —C(═O)—CH2— (e.g., derived from oxaloacetatic acid), —CH2—C(═O)— (e.g., derived from oxaloacetic acid); or


when the formula is Formula (IA), Z is selected from —CH(OH)—CH2(OH) and n is 0 e.g., derived from glyceric acid); or Z is absent or —CH2— and n is 1 and B is an alkyl group (e.g., derived from pyruvic acid or acetoacetic acid, respectively);


A and B are independently different or the same and are selected from —OR, —OR′, —NHR″, —SR′″


or —OH; wherein R is




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or in those cases, where the compound is according to Formula (IA), then B is C1-C4-alkyl, branched or straight, preferably R is Me;


R′ is selected from the formula (II), (V) or (IX) below:




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and both A and B are not —OH,


R′, R″ and R′″ are independently different or identical and are selected from formula (VII-VIII) below:




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R1 and R3 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl, CH2CH2CH2OC(—O)CH2CH2COX6R8 or




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X is selected from O, NH, NR6, S,


R2 is selected from Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, C(O)CH3, C(O)CH2C(O)CH3, C(O)CH2CH(OH)CH3,


p is an integer and is 1 or 2,


R6 is selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, or formula (II), or formula (VIII)


X5 is selected from —H, —COOH, —C(═O)XR6, CONR1R3 or one of the formulas




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R9 is selected from H, Me, Et or O2CCH2CH2COXR8,


R10 is selected from Oacyl, NHalkyl, NHacyl, or O2CCH2CH2CO X6R8, X6 is O or NR8, and R8 is selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, succinyl, or formula (II), or formula (VIII),


R11 and R12 are independently the same or different and are selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, succinyl, acyl, —CH2Xalkyl, —CH2Xacyl, where X is selected from O, NR6 or S,


R13, R14 and R15 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —COOH, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl


Rc and Rd are independently CH2Xalkyl, CH2Xacyl, where X═O, NR6 or S, and alkyl is e.g. H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, and acyl is e.g. formyl, acetyl, propionyl, isopropionyl, byturyl, tert-butyryl, pentanoyl, benzoyl, succinyl, or the like,


Rf, Rg, and Rh are independently selected from Xacyl, —CH2Xalkyl, —CH2X-acyl and R9,


alkyl is selected from methyl, ethyl, propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, n-pentyl, neopentyl, isopentyl, hexyl, isohexyl, heptyl, octyl, nonyl ordecyl, and acyl is selected from formyl, acetyl, propionyl, butyryl pentanoyl, benzoyl, succinyl and the like,


R20 and R21 are independently different or identical and are selected from H, lower alkyl, i.e. C1-C4 alkyl or R20 and R21 together may form a C4-C7 cycloalkyl or an aromatic group, both of which may optionally be substituted with halogen, hydroxyl or a lower alkyl, or


R20 and R21 may be




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or


CH2X-acyl, F, CH2COOH, CH2CO2alkyl, and


when there is a cyclic bond present between A and B the compound is




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and acyls and alkyls may be optionally substituted.


Compounds of formulas (I) and (IA), or a pharmaceutically acceptable salt thereof, wherein the dotted bond between A and B denotes an optional bond so as to form a ring closed structure, and


wherein A is —OR1, and R1 is H or a pharmaceutically acceptable salt, or an optionally substituted alkyl group or a group of formula (II) and B in formula (I) is —OR2 and R2 is independently a group according to formula (II) where formula (II) is




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wherein R3 and R4 are independently H, optionally substituted C1-C3 alkyl, or are linked together to form a ring and where R5 is linked to R1 to form a ring or R5 is selected from OCORa, OCOORb, OCONRcRd, SO2Re, OPO(ORf)(ORg) or CONRcRd where Ra is optionally substituted alkyl or optionally substituted cycloalkyl, Rb is optionally substituted alkyl, Rc and Rd are independently H, optionally substituted alkyl or are linked together to form a ring which may contain one or more further heteroatoms, Re is optionally substituted alkyl, Rf and Rg are independently, H, methyl, ethyl or are linked together to form a ring;


wherein B in Formula (IA) is C1-C4 alkyl, branched or straight;


and wherein


when the formula is Formula (I), Z is selected from —CH2— (e.g., derived from malonic acid), —CH2—CH2—CH2 (e.g., derived from glutaric acid), —CH═CH2— (e.g., derived from fumaric acid), —CH2—CH(OH)— (e.g., derived from malic acid), —CH(OH)—CH2— (e.g., derived from malic acid), CH2C(OH)(COOH)—CH2— (e.g., derived from citric acid —C(O)—CH2—CH2— (e.g., derived from alpha-ketoglutaric acid), —CH2—CH2—C(O)— (e.g., derived from alpha-ketoglutaric acid), —CH2—C(COC(OH)—C(COOH)—CHOH)═CH— (e.g., derived from aconitic acid), —CH═C(COOH)—CH2— (e.g., derived from aconitic acid), —CH(OH)— CH(COOH)—CH2— (e.g., derived from isocitric acid), —CH2—CH(COOH)—CH(OH)— (e.g., derived from isocitric acid), —CH2—CH(COOH)—C(═O)— (e.g., derived from oxalosuccinic acid), —C(═O)—CH(COOH)—CH2— (e.g., derived from oxalosuccinic acid), —C(═O)—CH2— (e.g., derived from oxaloacetatic acid), —CH2—C(═O)— (e.g., derived from oxaloacetic acid); or


when the formula is Formula (IA), Z is selected from —CH(OH)—CH2(OH) and n is 0 e.g., derived from glyceric acid); or Z is absent or —CH2— and n is 1 and B is an alkyl group (e.g., derived from pyruvic acid or acetoacetic acid, respectively).


Compounds of formulas (I) and (IA), or a pharmaceutically acceptable salt thereof, wherein the dotted bond between A and B denotes an optional bond so as to form a ring closed structure,


and wherein


when the formula is Formula (I), Z is selected from —CH2— (e.g., derived from malonic acid), —CH2—CH2—CH2 (e.g., derived from glutaric acid), —CH═CH2— (e.g., derived from fumaric acid), —CH2—CH(OH)— (e.g., derived from malic acid), —CH(OH)—CH2— (e.g., derived from malic acid), CH2C(OH)(COOH)—CH2— (e.g., derived from citric acid), —C(O)—CH2—CH2— (e.g., derived from alphaketoglutaric acid), —CH2—CH2—C(O)— (e.g., derived from alpha-ketoglutaric acid), —CH2—C(COC(OH)—C(COOH)—CHOH)═CH— (e.g., derived from aconitic acid), —CH═C(COOH)—CH2— (e.g., derived from aconitic acid), —CH(OH)—CH(COOH)—CH2— (e.g., derived from isocitric acid), —CH2—CH(COOH)—CH(OH)— (e.g., derived from isocitric acid), —CH2—CH(COOH)—C(═O)— (e.g., derived from oxalosuccinic acid), —C(═O)—CH(COOH)—CH2— (e.g., derived from oxalosuccinic acid), —C(═O)—CH2— (e.g., derived from oxaloacetatic acid), —CH2—C(═O)— (e.g., derived from oxaloacetic acid); or


when the formula is Formula (IA), Z is selected from —CH(OH)—CH2(OH) and n is 0 e.g., derived from glyceric acid); or Z is absent or —CH2— and n is 1 and B is an alkyl group (e.g., derived from pyruvic acid or acetoacetic acid, respectively);


A is selected from —SR, —OR and NHR, and R is




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when Z is CH2 and R is Me, Et, propyl, butyl, pentyl, hexyl, heptyl, octyl or succinyl, then X5, R15, R14 and R13 cannot all be H;


when Z is —CH2—CH2—CH2, —CH═CH—, —CH2—CH(OH)—, —CH(OH)—CH2—, —CH2C(OH)(COOH)—CH2—, —C(O)—CH2—CH2—, —CH2—CH2—C(O)—, —CH2—C(COOH)═CH—, —CH═C(COOH)—CH2—, —CH(OH)—CH(COOH)—CH2-, —CH2-CH(COOH)—CH(OH)—, —CH2—CH(COOH)—C(═O)—, —C(═O)—CH(COOH)—CH2-, —C(═O)—CH2-, or —CH2-C(═O)— and R1 is Me, octyl or succinyl, then X5, R15, R14 and R13 cannot all be H;


R1 cannot contain the motif —CH2CH2N-acyl; R1 cannot be glutamate; when in formula (IA), Z is —CH(OH)—CH2(OH) and n is 0, or Z is absent and n is 1 and B is an alkyl group (e.g., derived from pyruvic acid) then R1 cannot be Me when X5 is —COOH, or —C(═O)XR6;


B is selected from —O—R′, —NHR″, —SR′″ or —OH; and R′ is selected from the formula (II) to (IX) below:




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or in those cases, where the compound is according to Formula (IA), then B is C1-C4-alkyl, branched or straight, preferably R is Me;


R′, R″ and R′″ are independently different or identical and is selected from formula (VII-VIII) below:




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R1 and R3 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, —CH2Xalkyl, —CH2X-acyl, F, —CH2COOH, —CH2CO2alkyl,


X is selected from O, NH, NR6, S,


R2 is selected from Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —C(O)CH3, —C(O)CH2C(O)CH3, —C(O)CH2CH(OH)CH3,


p is an integer and is 1 or 2


R6 is selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, or formula (II), or formula (VIII)


X5 is selected from —H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —COOH, —C(═O)XR6, CONR1R3 or is formula




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X7 is selected from R1, —NR1R3,


R9 is selected from H, Me, Et or O2CCH2CH2COXR8


R10 is selected from —Oacyl, —NHalkyl, —NHacyl, or O2CCH2CH2COX6R8


X6 is selected from O, NR8, NR6R8, wherein R6 and R8 are independently different or identical and are is selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, or formula (II), or formula (VIII),


R11 and R12 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, propionyl, benzoyl, —CH2Xalkyl, —CH2Xacyl, where X is O, NR6 or S,


Rc and Rd are independently different or identical and are selected from CH2Xalkyl, CH2Xacyl, where X═O, NR6 or S,


R13, R14 and R15 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —COOH, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl;


Substituents on R13 and R14 or R13 and R15 may bridge to form a cyclic system to form cycloalkyl, heterocycloalkyl, lactone or lactams.


Rf, Rg, and Rh are independently different or identical and are selected from Xacyl, —CH2Xalkyl, —CH2X-acyl and Rg,


alkyl is selected from Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl,


acyl is selected from formyl, acetyl, propionyl, isopropionyl, buturyl, tert-butyryl, pentanoyl, benzoyl, succinyl,


acyl and/or alkyl may be optionally substituted, and


when the dotted bond between A and B is present, the compound according to formula (I) is




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wherein X4 is selected from —COOH, —C(═O)XR6,




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A compound of formula (I), or a pharmaceutically acceptable salt thereof, wherein the dotted bond between A and B denotes an optional bond so as to form a ring closed structure,


and wherein


Z is selected from —CH2—CH2— or >CH(CH3),


A is selected from —SR, —OR and NHR, and R is




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B is selected from —O—R′, —NHR″, —SR′″ or —OH; and R′ is selected from the formula (II) to (IX) below:




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R′, R″ and R′″ are independently different or identical and is selected from formula (IV-VIII) below:




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R1 and R3 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl, CH2X-acyl, F, CH2COOH, CH2CO2alkyl,


X is selected from O, NH, NR6, S,


R2 is selected from Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, C(O)CH3,


C(O)CH2C(O)CH3, C(O)CH2CH(OH)CH3,


p is an integer and is 1 or 2


R6 is selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, or formula (II), or formula (VIII)


X5 is selected from —H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —COOH, —C(═O)XR6, CONR1R3 or is formula




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X7 is selected from R1, —NR1R3,


R9 is selected from H, Me, Et or O2CCH2CH2COXR8


Rio is selected from Oacyl, NHalkyl, NHacyl, or O2CCH2CH2COX6R8


X6 is selected from O, NR8, NR6R8, wherein R6 and R8 are independently different or identical and are is selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, or formula (II), or formula (VIII),


R11 and R12 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, propionyl, benzoyl, —CH2Xalkyl, —CH2Xacyl, where X is O, NR6 or S,


Rc and Rd are independently different or identical and are selected from CH2Xalkyl, CH2Xacyl, where X═O, NR6 or S,


R13, R14 and R15 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —COOH, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl;


substituents on R13 and R14 or R13 and R15 may bridge to form a cyclic system to form cycloalkyl, heterocycloalkyl, lactone or lactams.


Rf, Rg, and Rh are independently different or identical and are selected from Xacyl, —CH2Xalkyl, —CH2X-acyl and Rg,


alkyl is selected from Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl,


acyl is selected from formyl, acetyl, propionyl, isopropionyl, buturyl, tert-butyryl, pentanoyl, benzoyl, succinyl,


acyl and/or alkyl may be optionally substituted, and


when the dotted bond between A and B is present, the compound according to formula (I) is




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wherein X4 is selected from —COOH, —C(═O)XR6,




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A compound of formula (I), or a pharmaceutically acceptable salt thereof, wherein the dotted bond between A and B denotes an optional bond so as to form a ring closed structure,


and wherein


Z is selected from —CH2—CH2— or >CH(CH3),


A and B are independently different or the same and are selected from —OR, —OR′, —NHR″, —SR′″ or —OH; wherein R is




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R′ is selected from the formula (II), (V) or (IX) below:




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and both A and B are not —OH,


R′, R″ and R′″ are independently different or identical and are selected from formula (VII-VIII) below:




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R1 and R3 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl, CH2CH2CH2OC(—O)CH2CH2COX6R8 or




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X is selected from O, NH, NR6, S,


R2 is selected from Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, C(O)CH3, C(O)CH2C(O)CH3, C(O)CH2CH(OH)CH3,


p is an integer and is 1 or 2,


R6 is selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, or formula (II), or formula (VIII)


X5 is selected from —H, —COOH, —C(═O)XR6, CONR1R3 or one of the formulas




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R9 is selected from H, Me, Et or O2CCH2CH2COXR8,


R10 is selected from Oacyl, NHalkyl, NHacyl, or O2CCH2CH2CO X6R8,


X6 is O or NR8, and R8 is selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, succinyl, or formula (II), or formula (VIII),


R11 and R12 are independently the same or different and are selected from H, alkyl, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, acetyl, acyl, propionyl, benzoyl, succinyl, acyl, —CH2Xalkyl, —CH2Xacyl, where X is selected from O, NR6 or S,


Ris, RM and RI5 are independently different or identical and are selected from H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, —COOH, O-acyl, O-alkyl, N-acyl, N-alkyl, Xacyl, CH2Xalkyl


Rc and Rd are independently CH2Xalkyl, CH2Xacyl, where X═O, NR6 or S, and alkyl is e.g. H, Me, Et, propyl, i-propyl, butyl, iso-butyl, t-butyl, and acyl is e.g. formyl, acetyl, propionyl, isopropionyl, byturyl, tert-butyryl, pentanoyl, benzoyl, succinyl, or the like,


Rf, Rg, and Rh are independently selected from Xacyl, —CH2Xalkyl, —CH2X-acyl and R9, alkyl is selected from methyl, ethyl, propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, n pentyl, neopentyl, isopentyl, hexyl, isohexyl, heptyl, octyl, nonyl or decyl, and acyl is selected from formyl, acetyl, propionyl, butyryl pentanoyl, benzoyl, succinyl and the like,


R20 and R21 are independently different or identical and are selected from H, lower alkyl, i.e. C1-C4 alkyl or R20 and R21 together may form a C4-C7 cycloalkyl or an aromatic group, both of which may optionally be substituted with halogen, hydroxyl or a lower alkyl, or


R20 and R21 may be




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or


CH2X-acyl, F, CH2COOH, CH2CO2alkyl, and


when there is a cyclic bond present between A and B the compound is




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and acyls and alkyls may be optionally substituted.


A compound of formula (A),




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wherein and R2 are same or different and selected from formula (B)




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and wherein R3 is selected from H, or optionally substituted C1-C3 alkyl such as e.g., methyl, ethyl, propyl or iso-propyl and wherein R5 is —OC(═O)Ra, wherein Ra is methyl or formula (C)




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A compound of formula (XX),




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wherein R-\ is H or a pharmaceutically acceptable salt, or an optionally substituted alkyl group or a group of formula (II) and R2 is independently a group according to formula (II) where formula (II) is




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wherein R3 and R4 are independently H, optionally substituted C1-C3 alkyl, or are linked together to form a ring and where R5 is linked to R1 to form a ring or R5 is selected from OCORa, OCOORb, OCONRcRd, SO2Re, OPO(ORf)(ORg) or CONRcRd where Ra is optionally substituted alkyl or optionally substituted cycloalkyl, Rb is optionally substituted alkyl, Rc and Rd are independently H, optionally substituted alkyl or are linked together to form a ring which may contain one or more further heteroatoms, Re is optionally substituted alkyl, Rf and Rg are independently, H, methyl, ethyl or are linked together to form a ring and wherein the compound is not succinic acid bis (2,2-dimethylpropionyloxymethyl) ester; succinic acid dibutyryloxymethyl ester; or succinic acid bis-(1-butyryloxy-ethyl) ester.


The invention also provides therapeutic compositions that contain citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid as one component of combination therapies that also include a composition containing a TCA cycle intermediate or prodrug, analog, or derivative thereof. The compositions that contain citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be formulated for oral administration, or they may be formulated for non-oral administration.


The compositions of the invention may contain a buffering agent. Any suitable buffering agent may be used. The buffering agent may be an amino acid or a derivative thereof. For example, the amino acid may be alanine, arginine, asparagine, aspartic acid, cysteine, cystine, glutamic Acid, glutamine, glycine, histidine, isoleucine, leucine, lysine, methionine, ornithine, phenylalanine, proline, serine, threonine, tryptophan, tyrosine, or valine. Preferably, the amino acid is lysine or ornithine. The buffering agent may be or may contain a metal ion. For example, the metal ion may be Na+, K+, Ca2+, Me+, or Cu2+.


The buffering agent may maintain the pH of the composition at neutral or close to neutral. For example and without limitation, the buffering agent may maintain the pH of the composition at from about 3.0 to about 10.0, from about 3.0 to about 9.0, from about 3.0 to about 8.0 from about 3.0 to about 7.0, from about 3.0 to about 6.0, from about 4.0 to about 10.0, from about 4.0 to about 9.0, from about 4.0 to about 8.0 from about 4.0 to about 7.0, from about 4.0 to about 6.0, from about 5.0 to about 10.0, from about 5.0 to about 9.0, from about 5.0 to about 8.0 from about 5.0 to about 7.0, from about 6.0 to about 10.0, from about 6.0 to about 9.0, from about 6.0 to about 8.0 from about 7.0 to about 10.0, from about 7.0 to about 9.0, or from about 8.0 to about 10.0.


In another aspect, the invention provides a formulation including citric acid, or a prodrug, analog, derivative thereof; at least one citrate salt, or a prodrug, analog, or derivative thereof; and an amino acid. The formulation may include citric acid and at least one citrate salt, for example, the at least one citrate salt may be selected from the group consisting of monosodium citrate and monopotassium citrate. In other embodiments, the formulation may be citric acid and at least two citrate salts, for example, the at least two citrate salts may be monosodium citrate and monopotassium citrate.


The formulation may include any natural or non-natural amino acid. In certain embodiments, the amino acid is a cationic amino acid, such as lysine or arginine. The formulation may include other components, such as a sugar, for example sucrose.


The formulation may be provided by any route of administration, and a preferable route is oral. An exemplary oral formulation is a powder that is soluble in an aqueous medium. In a particular embodiment, the formulation includes citric acid, monosodium citrate, monopotassium citrate, sucrose, and one or more of lysine and arginine.


Other aspects of the invention provide methods of treating a condition associated with altered TCA cycle metabolism in a subject. Such methods may involve providing to a subject having a condition associated with altered TCA cycle metabolism a formulation comprising (i) citric acid, or a prodrug, analog, derivative thereof; (ii) at least one citrate salt, or a prodrug, analog, or derivative thereof; and (iii) an amino acid, wherein a therapeutic effect is achieved in the subject by activity of a combination of two or more of components (i), (ii), and (iii) in the formulation. In certain embodiments, the amino acid is incorporated into the TCA cycle of the subject and contributes to the therapeutic effect that is achieved in the subject.


Exemplary conditions include a disorder related to POLG mutation, an energetic disorder, glutaric acidemia type 1 or type 2, a long chain fatty acid oxidation disorder, methylmalonic acidemia (MMA), a mitochondrial associated disease, a mitochondrial encephalomyopathy lactic acidosis and stroke-like syndrome (MELAS), myoclonic epilepsy and ragged-red fibers (MERRF), mitochondrial myopathy, a mitochondrial respiratory chain deficiency, muscular dystrophy (e.g., Duchenne's muscular dystrophy and Becker's muscular dystrophy), a neurologic disorder, a pain or fatigue disease, propionic acidemia (PA), pyruvate carboxylase deficiency, refractory epilepsy, or succinyl CoA lyase deficiency.


The formulation may include citric acid and at least one citrate salt, for example, the at least one citrate salt may be selected from the group consisting of monosodium citrate and monopotassium citrate. In other embodiments, the formulation may be citric acid and at least two citrate salts, for example, the at least two citrate salts may be monosodium citrate and monopotassium citrate.


The formulation may include any natural or non-natural amino acid. In certain embodiments, the amino acid is a cationic amino acid, such as lysine or arginine. The formulation may include other components, such as a sugar, for example sucrose.


The formulation may be provided by any route of administration, and a preferable route is oral. An exemplary oral formulation is a powder that is soluble in an aqueous medium. In a particular embodiment, the formulation includes citric acid, monosodium citrate, monopotassium citrate, sucrose, and one or more of lysine and arginine. The formulation may be provided in one or multiple doses per day. For example, one or more of the formulations may be provided in 1, 2, 3, 4, 5, 6, or more doses per day.


The formulation containing citrate or a prodrug, analog, or derivative thereof may be provided at any therapeutically effective dose. For example, citrate or a prodrug, analog, or derivative thereof may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


The formulation, or the soluble components within the formulation, may contain citric acid, monosodium citrate, monopotassium citrate, lysine, and sucrose. The formulation may contain, by mass, from about 40% to about 60% citric acid; from about 1% to about 10% monosodium citrate; from about 0.1% to about 5% monopotassium citrate; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 49.2% citric acid, about 2% monosodium citrate, about 0.3% monopotassium citrate, about 37.5% lysine, and about 11% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 44.2% citric acid, about 8.3% monosodium citrate, about 2.3% monopotassium citrate, about 33.8% lysine, and about 11.5% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, from about 50% to about 60% citrate, citric acid, or a combination thereof; from about 0.2% to about 1% sodium; from about 0.02% to about 0.5% potassium; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose.


Formulations of the invention may contain aqueous suspensions of one or more TCA cycle intermediates or prodrugs, analogs, or derivatives thereof. The aqueous suspensions may contain the TCA cycle intermediate in admixture with excipients suitable for the manufacture of aqueous suspensions. Such excipients are suspending agents, for example sodium carboxymethylcellulose, methylcellulose, hydroxypropylmethylcellulose, sodium alginate, polyvinylpyrrolidone, gum tragacanth and gum acacia; dispersing or wetting agents such as a naturally occurring phosphatide, for example lecithin, or condensation products of an alkylene oxide with fatty acids, for example, polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethyleneoxycetanol, or condensation products of ethylene oxide with partial esters derived from fatty acids and a hexitol such a polyoxyethylene with partial esters derived from fatty acids and hexitol anhydrides, for example polyoxyethylene sorbitan monooleate. The aqueous suspensions may also contain one or more preservatives, for example ethyl, or n-propyl p-hydroxybenzoate, one or more coloring agents, one or more flavoring agents, and one or more sweetening agents, such as sucrose or saccharin.


Oily suspensions may be formulated by suspending the TCA cycle intermediate in a vegetable oil, for example, arachis oil, olive oil, sesame oil or coconut oil, or in a mineral oil such as liquid paraffin. The oily suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents such as those set forth above, and flavoring agents may be added to provide a palatable oral preparation. These compositions may be preserved by the addition of an anti-oxidant such as ascorbic acid.


Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the TCA cycle intermediate in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives. Suitable dispersing or wetting agents and suspending agents are exemplified, for example sweetening, flavoring and coloring agents, may also be present.


The compositions of the invention may also be in the form of oil-in-water emulsions. The oily phase may be a vegetable oil, for example olive oil or arachis oil, or a mineral oil, for example liquid paraffin or mixtures of these. Suitable emulsifying agents may be naturally-occurring gums, for example gum acacia or gum tragacanth, naturally occurring phosphatides, for example soya bean, lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan monooleate and condensation products of the said partial esters with ethylene oxide, for example polyoxyethylene sorbitan monooleate. The emulsions may also contain sweetening and flavoring agents.


Compositions of the invention may include other pharmaceutically acceptable carriers, such as sugars, such as lactose, glucose and sucrose; starches, such as corn starch and potato starch; cellulose, and its derivatives, such as sodium carboxymethyl cellulose, ethyl cellulose and cellulose acetate; powdered tragacanth; malt; gelatin; talc; excipients, such as cocoa butter and suppository waxes; oils, such as peanut oil, cottonseed oil, safflower oil, sesame oil, olive oil, corn oil and soybean oil; glycols, such as propylene glycol; polyols, such as glycerin (glycerol), erythritol, xylitol, sorbitol, mannitol and polyethylene glycol; esters, such asethyl oleate and ethyllaurate; agar; buffering agents, such as magnesium hydroxide and aluminum hydroxide; alginic acid; pyrogen-free water; isotonic saline; Ringer's solution; ethyl alcohol; pH buffered solutions; polyesters, polycarbonates and/or polyanhydrides; and other non-toxic compatible substances employed in pharmaceutical formulations.


Compositions containing TCA cycle intermediates may be in a form suitable for oral use. For example, oral formulations may include tablets, troches, lozenges, fast-melts, aqueous or oily suspensions, dispersible powders or granules, emulsions, hard or soft capsules, syrups or elixirs. Compositions intended for oral use may be prepared according to any method known in the art for the manufacture of pharmaceutical compositions and such compositions may contain one or more agents selected from sweetening agents, flavoring agents, coloring agents and preserving agents, in order to provide pharmaceutically elegant and palatable preparations. Tablets contain citrate or citric acid in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for the manufacture of tablets. These excipients may be for example, inert diluents, such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents, for example corn starch, or alginic acid; binding agents, for example starch, gelatin or acacia, and lubricating agents, for example magnesium stearate, stearic acid or talc. The tablets may be uncoated or they may be coated by known techniques to delay disintegration in the stomach and absorption lower down in the gastrointestinal tract and thereby provide a sustained action over a longer period. For example, a time delay material such as glyceryl monostearate or glyceryl distearate may be employed. They may also be coated by the techniques described in U.S. Pat. Nos. 4,256,108, 4,166,452 and 4,265,874, to form osmotic therapeutic tablets for control release.


Formulations for oral use may also be presented as hard gelatin capsules in which the citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid is mixed with an inert solid diluent, for example calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules in which the compound is mixed with water or an oil medium, for example peanut oil, liquid paraffin or olive oil.


An alternative oral formulation, where control of gastrointestinal tract hydrolysis of the citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid is sought, can be achieved using a controlled-release formulation, where a compound of the invention is encapsulated in an enteric coating.


Syrups and elixirs for oral administration of citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be formulated with sweetening agents, such as glycerol, propylene glycol, sorbitol or sucrose. Such formulations may also contain a demulcent, a preservative, and agents for flavoring and/or coloring. The pharmaceutical compositions may be in the form of a sterile injectable aqueous or oleaginous suspension. This suspension may be formulated according to the known art using those suitable dispersing or wetting agents and suspending agents which have been mentioned above. The sterile injectable preparation may also be in a sterile injectable solution or suspension in a non-toxic parenterally acceptable diluent or solvent, for example as a solution in 1,3-butanediol. Among the acceptable vehicles and solvents that may be employed are water, Ringer's solution and isotonic sodium chloride solution. In addition, sterile, fixed oils are conventionally employed as a solvent or suspending medium. For this purpose any bland fixed oil may be employed including synthetic mono- or di-glycerides. In addition, fatty acids such as oleic acid find use in the preparation of injectables.


The methods of the invention include compositions that are provided as intraocular formulations. Intraocular formulations include any formulation suitable for delivery of an agent to the eye. For example and without limitation, intraocular formulations include aqueous gels, contact lenses, dendrimers, emulsions, emulsions, eye drops, implants, in situ thermosensitive gels, liposomes, microneedles, nanomicelles, nanoparticles, nanosuspensions, ointments, and suspensions. Ocular formulations are known in the art and describe in, for example, Patel, A., et al., Ocular drug delivery systems: An overview, World J Pharmacol. 2013; 2(2): 47-64. doi:10.5497/wjp.v2.i2.47; U.S. Pat. No. 9,636,347; U.S. Publication Nos. 2017/0044274 and 2009/0148527; and International Publication No. WO 2015/105458, the contents of each of which are incorporated herein by reference.


The invention also provides therapeutic compositions that contain the following components: a non-salt form of citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid; a nutritional source for infants, such as baby formula or human breast milk; and a buffering agent. The compositions are suitable for oral administration to human infants and provide both basic nutrition and a supplemental source of citrate or citric acid.


The nutritional source may contain one or more of a fat source, a carbohydrate source, and a source of protein or amino acids. The protein source may contain whey and/or casein. The protein source may contain lactose. The fat source may contain a vegetable oil. The nutritional source may contain vitamins and/or minerals.


The nutritional source may be engineered to fulfill the dietary needs of an infant with a metabolic disorder, such as PA or MMA. For example, the source of protein or amino acids may be substantially free of valine, isoleucine, threonine, and methionine. The fat source may be free of odd-chain fatty acids. The nutritional source may be supplemented with carnitine or antibiotics. The nutritional source may have a reduced content of protein and/or amino acids compared to a recommended value for a healthy infant, or it may be substantially free of protein and/or amino acids.


The buffering agent in the compositions containing a non-salt form of citrate or citric acid and a nutritional source may contain any buffering agent, such as those described above. Preferably, the buffering agent is an amino acid, such as lysine or ornithine. The buffering agent may be or may contain a metal ion.


The compositions of the invention may contain one or more antibiotics.


The invention also provides formulations that allow oral delivery of citrate in sufficient quantities to remedy diseases, disorders, and conditions associated with altered TCA cycle metabolism without providing an excessive amount of any mineral or metal ion. The formulations contain amounts of citrate salts such that when the formulation is administered to a person, the cationic component of each salt provided to the person does not exceed the recommended daily amount of that component. In preferred embodiments, the formulation contains each citrate salt in an amount that does not exceed the recommended daily amount of the cation in that citrate salt. Alternatively or additionally, the formulation may comprise a formulation in which the amount of each citrate salt released into the subject's body does not exceed the recommended daily amount of the cation in that citrate salt.


Preferably, the formulation contains the following components: citric acid, or a prodrug, analog, or derivative thereof; one or more citrate salts, or prodrugs, analogs, derivatives thereof; and an amino acid (as an active agent, a buffering agent or both).


The formulation may be a powder that is soluble in an aqueous medium. For example, the formulation may be provided as a dry powder to which water can be added to provide an aqueous solution or suspension that can be consumed orally by a subject. Alternatively, the formulation may be provided as an aqueous solution. The formulation may be provided in a single-serving or a multiple-serving format.


The amino acid may be any amino acid, such as any of those described above. Preferably, the amino acid is lysine, arginine, or ornithine.


Any suitable citrate salt or combination of citrate salts may be used in the formulation. The salt may contain sodium, lithium, potassium, calcium, magnesium, or manganese. The salt may contain citrate in its monobasic, dibasic, or tribasic state. Preferably, the salt is monosodium citrate or monopotassium citrate.


Preferred formulations include citric acid and a combination of citrate salts, such as a combination monosodium citrate and monopotassium citrate. Such combinations allow delivery of ample citrate, in various ionization states, without providing an excess of any individual metal ion.


The recommended daily amount of a salt or mineral may be any amount determined to be suitable for intake for a person in one day. The recommended daily amount may be a minimum amount that should be taken in, a maximum amount that should not be exceeded, or a value or range of values between the two. The recommended daily amount may correspond to a standard known in the art, such as a standard promulgated by a private, governmental, medical, or health agency. For example and without limitation, the standard may be the acceptable daily intake (ADI), issued by the Food and Agriculture Organization and the World Health Organization; the daily intake guide (DIG), issued by the Australian Food and Grocery Council; the daily value (DV) and reference daily intake (RDI), issued by Health Canada; the daily value (DV) or reference daily intake (RDI), issued by the Food and Drug Administration (FDA) in the United States; the dietary reference intake (DRI), estimated average requirement (EAR), or recommended dietary/daily allowance (RDA), issued by the Institute of Medicine (IOM) of the National Academies in the United States; the dietary reference value (DRV), lower reference nutrient intake (LRNI), or reference nutrient intake (RNI), issued by the United Kingdom Department of Health; the dietary reference value (DRV), lower reference nutrient intake (LRNI), or reference nutrient intake (RNI), issued by the European Union's European Food Safety Authority; the guideline daily amount (GDA), issued by the Institute of Grocery Distribution; or the adequate intake (AI), issued by the National Institutes of Health in the United States.


The recommended daily amount may account for conditions related to the individual, such as age, sex, weight, pregnancy status, lactation status, or menopausal status. For example, the recommended daily amounts of several minerals, such as calcium, iron, and potassium, are higher for women who are pregnant and/or lactating than for non-pregnant, non-lactating women. Other groups of patients whose mineral needs may vary include children, (i.e., pediatric patients), post-menopausal women, and the elderly.


For example and without limitation, the recommended daily amounts for specific minerals may be as follows: about 700 mg, about 800 mg, about 1000 mg, about 1200 mg, about 1300 mg, about 1500 mg, about 2000 mg, or about 2500 mg, of calcium; about 0.2 mg, about 0.22 mg, about 0.34 mg, about 0.44 mg, about 0.7 mg, about 0.89 mg, about 0.9 mg, about 1 mg, about 1.3 mg, about 2 mg, about 4 mg, about 6 mg, about 8 mg, or about 10 mg of copper; about 6 mg, about 7 mg, about 8 mg, about 9 mg, about 10 mg, about 11 mg, about 13 mg, about 16 mg, about 18 mg, about 24 mg, about 27 mg, about 30 mg, about 36 mg, about 40 mg, or about 45 mg of iron; about 80 mg, about 150 mg, about 200 mg, about 250 mg, about 310 mg, about 320 mg, about 350 mg, about 360 mg, about 400 mg, or about 420 mg of magnesium; about 1.2 mg, about 1.5 mg, about 1.6 mg, about 1.8 mg, about 1.9 mg, about 2 mg, about 2.2 mg, about 2.3 mg, about 2.6 mg, about 3 mg, about 4 mg, about 6 mg, about 8 mg, about 10 mg, or about 11 mg of manganese; about 3000 mg, about 3500 mg, about 3800 mg, about 4000 mg, about 4500 mg, about 4700 mg, or about 5100 mg of potassium; about 1500 mg, about 2000 mg, about 2300 mg, or about 2400 mg, about 3000 mg, or about 3400 mg of sodium; and about 8 mg, about 9.4 mg, about 11 mg, about 12 mg, about 13 mg, about 15 mg, about 20 mg, about 25 mg, about 30 mg, about 35 mg, or about 40 mg of zinc. The formulation may contain one or more sugars to improve the flavor when the formulation is provided orally to a subject. For example and without limitation, the sugar may be sucrose, fructose, galactose, maltose, or lactose.


The formulation, or the soluble components within the formulation, may contain citric acid, monosodium citrate, monopotassium citrate, lysine, and sucrose. The formulation may contain, by mass, from about 40% to about 60% citric acid; from about 1% to about 10% monosodium citrate; from about 0.1% to about 5% monopotassium citrate; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 49.2% citric acid, about 2% monosodium citrate, about 0.3% monopotassium citrate, about 37.5% lysine, and about 11% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, about 44.2% citric acid, about 8.3% monosodium citrate, about 2.3% monopotassium citrate, about 33.8% lysine, and about 11.5% sucrose. The formulation, or the soluble components within the formulation, may contain, by mass, from about 50% to about 60% citrate, citric acid, or a combination thereof; from about 0.2% to about 1% sodium; from about 0.02% to about 0.5% potassium; from about 30% to about 40% lysine; and from about 10% to about 15% sucrose.


Methods of Treating Metabolic Disorders

The invention provides methods of treating metabolic disorders, diseases, or conditions by providing one or more TCA cycle intermediates or prodrugs, analogs, or derivatives thereof formulated for non-oral administration. The compositions may be administered by any non-oral route. For example and without limitation, the composition may be administered subcutaneously, intravenously, intraarterially, intramuscularly, intradermally, or rectally. Preferably, the composition is administered subcutaneously or intravenously.


The composition containing a TCA cycle intermediate or prodrug, analog, or derivative thereof formulated for non-oral administration may be any of the one described above, such as citrate, cis-aconitate, D-isocitrate, α-ketoglutarate, succinate, fumarate, malate, oxaloacetate, acetone, acetoacetate, β-hydroxybutyrate, β-ketopentanoate, or β-hydroxypentanoate. Preferably, the TCA cycle intermediate is succinate.


The metabolic disorder, disease, or condition may be any disease, disorder, or condition associated with altered TCA cycle metabolism or that can be ameliorated by providing an intermediate of the TCA cycle, such as any of those described above.


The TCA cycle intermediate or prodrug, analog, or derivative thereof may be provided at any therapeutically effective dose. For example and without limitation, the TCA cycle intermediate or prodrug, analog, or derivative thereof may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 5 g/kg subject weight, from about 0.5 mg/kg subject weight to about 5 g/kg subject weight, from about 1 mg/kg subject weight to about 5 g/kg subject weight, from about 2 mg/kg subject weight to about 5 g/kg subject weight, from about 5 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 2 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 2 g/kg subject weight, from about 1 mg/kg subject weight to about 2 g/kg subject weight, from about 2 mg/kg subject weight to about 2 g/kg subject weight, from about 5 mg/kg subject weight to about 2 g/kg subject weight, from about 0.1 mg/kg subject weight to about 1 g/kg subject weight, from about 0.2 mg/kg subject weight to about 1 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 1 g/kg subject weight, from about 2 mg/kg subject weight to about 1 g/kg subject weight, from about 5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


The composition may be provided according to any suitable schedule. For example and without limitation, the composition may be provided as single dose every 1 hour, 2 hours, 4 hours, 6 hours, 8 hours, 12 hours, 1 day, 2 days, 3 days, 4 days, 5 days, or more. Each formulation independently may be provided once, twice, three times, four times, or more per day.


The composition may be provided over a period of time. For example and without limitation, the composition may be provided for 1 day, 2 days, 3 days, 4 days, 5 days, 6 days, 1 week, 2 weeks, 3 weeks, 4 weeks, 6 weeks, 8 weeks, 12 weeks, 3 months, 4 months, 5 months, 6 months, 8 months, 10 months, 12 months, 18 months, or 24 months. One or more boundaries of the period may be defined by the age of the patient. For example and without limitation, the period of providing the composition may start or end when the patient is born, 1 week old, 2 weeks old, 3 weeks old, 4 weeks old, 6 weeks old, 8 weeks old, 10 weeks old, 12 weeks old, 3 months old, 3 months old, 4 months old, 5 months old, 6 months old, 8 months old, 10 months old, 12 months old, 18 months old, or 24 months old.


The invention provides combination therapies for treating metabolic disorders, diseases, or conditions. The combination therapies include providing a non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and another formulation containing citrate, citric acid, or a prodrug, analog, or derivative thereof. The non-oral formulation may be administered by any non-oral route. For example and without limitation, the non-oral formulation may be administered subcutaneously, intravenously, intraarterially, intramuscularly, intradermally, or rectally. Preferably, the non-oral formulation is administered subcutaneously or intravenously. The formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be administered by any route, such as orally, enterally, parenterally, subcutaneously, intravenously, intraarterially, intramuscularly, intradermally, or rectally. Preferably, the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid is provided orally.


The combination therapies of the invention may be used to treat any disease, disorder, or condition associated with altered TCA cycle metabolism or that can be ameliorated by providing an intermediate of the TCA cycle, such as any of those described above.


In the combination therapies of the invention, each of succinate or a prodrug, analog, or derivative thereof and citrate or a prodrug, analog, or derivative of citrate or citric acid is provided at therapeutically effective dose. For example, each independently may be provided at from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.1 mg/kg subject weight to about 5 g/kg subject weight, from about 0.2 mg/kg subject weight to about 2 g/kg subject weight, from about 0.5 mg/kg subject weight to about 1 g/kg subject weight, from about 1 mg/kg subject weight to about 500 mg/kg subject weight, from about 2 mg/kg subject weight to about 200 mg/kg subject weight, or from about 5 mg/kg subject weight to about 100 mg/kg subject weight.


In the combination therapies of the invention, the non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and the other formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be provided in any temporal relationship. For example, the two formulations may be provided simultaneously, sequentially in either order, or in alternating sequence. In a preferred method, the non-oral formulation containing succinate or a prodrug, analog, or derivative thereof is provided first, and the formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid is provided subsequently.


In the combination therapies of the invention, each formulation independently may be provided according to any suitable schedule, as described above.


In the combination therapies of the invention, each formulation independently may be provided over a period of time, as described above.


In the combination therapies of the invention, the non-oral formulation containing succinate or a prodrug, analog, or derivative thereof and the other formulation containing citrate, citric acid, or a prodrug, analog, or derivative of citrate or citric acid may be provided over distinct periods, coextensive periods, or overlapping periods. Thus, the combination therapies may include transitions from a period in which one formulation is provided to a period in which the other formulation is provided. The transitions may be discrete, or they may contain periods in which both formulations are provided. The transitions may be gradual and may include a decrease in dosage of the first formulation and an increase in dosage of the second formulation.


EXAMPLES
Example 1: Subcutaneous Administration of Succinate

Summary


The bioavailability of 13C4-succinate was determined following subcutaneous (SC) administration in male Sprague-Dawley rats. 13C4-succinate was dosed subcutaneously at 10 mg/kg, 50 mg/kg, and 100 mg/kg. Blood samples were collected up to 8 hours post-dose, and plasma concentrations of the test article were determined by LC-MS/MS. Pharmacokinetic parameters were determined using Phoenix WinNonlin (v8.0) software.


Following SC dosing of 13C4-succinate at 10 mg/kg, maximum plasma concentrations (average of 3480±1512 ng/mL) were observed at 15 minutes post dosing. The average half-life following subcutaneous dosing could not be determined; however, the half-life for one rat was 0.453 hours. The average exposure based on the dose-normalized AUClast was 160±55.4 hr*kg*ng/mL/mg. Based on the IV data from a previous study, the average bioavailability of 13C4-succinate at 10 mg/kg was 74.4±25.7%.


Following SC dosing of 13C4-succinate at 50 mg/kg, maximum plasma concentrations (average of 17333±2214 ng/mL) were observed at 15 minutes post dosing. The average half-life following subcutaneous dosing could not be determined because the correlation coefficient (r2) was less than 0.85. The average exposure based on the dose-normalized AUClast was 210±41.0 hr*kg*ng/mL/mg. Based on the IV data from a previous study, the average bioavailability of 13C4-succinate at 50 mg/kg was 97.6±19.0%.


Following SC dosing of 13C4-succinate at 100 mg/kg, maximum plasma concentrations (average of 31000±7451 ng/mL) were observed at 15 minutes post dosing. The average half-life following subcutaneous dosing was 1.07 hours. The average exposure based on the dose-normalized AUClast was 216±52.9 hr*kg*ng/mL/mg. Based on the IV data from a previous study, the average bioavailability of 13C4-succinate at 100 mg/kg was 100±24.6%.


Following subcutaneous dosing of 13C4-succinate at 10, 50, and 100 mg/kg, there was a nonlinear increase in exposure with increasing dose. The exposure of the higher doses was dose proportional, but greater than dose proportional to the low dose exposure.


Observations and Adverse Reactions


No adverse reactions were observed following subcutaneous dosing of 13C4-succinate in male Sprague-Dawley rats.


Dosing Solution Analysis


The dosing solutions were analyzed by LC-MS/MS. The measured dosing solution concentrations are shown in Table 1. The dosing solutions were diluted into rat plasma and analyzed in triplicate. All concentrations are expressed as mg/mL of the free base. The nominal dosing level was used in all calculations.









TABLE 1







Measured Dosing Solution Concentrations (mg/mL)















Nominal
Measured




Route of

Dosing
Dosing


Test
Adminis-

Conc.
Conc.
% of


Article
tration
Vehicle
(mg/mL)
(mg/mL)
Nominal
















13C4-

SC
Physiologic
2
2.14
107


succinate
SC
Saline
10
9.75
97.5



SC
buffered to
20
19.5
97.3




pH 6.5-7









Quantitative Plasma Sample Analysis


Plasma samples were extracted and analyzed using the methods described below in the section on Sample Extraction. Individual and average plasma concentrations are shown in Table 2 through Table 4. All data are expressed as ng/mL of the free base. Samples that were below the limit of quantification were not used in the calculation of averages. Concentrations versus time data are plotted in FIG. 1 through FIG. 6.


Data Analysis


Pharmacokinetic parameters were calculated from the time course of the plasma concentration and are presented in Table 2 through Table 4. Pharmacokinetic parameters were determined with Phoenix WinNonlin (v8.0) software using a non-compartmental model. The maximum plasma concentration (Cmax) and the time to reach maximum plasma concentration (tmax) after SC dosing were observed from the data. The area under the time-concentration curve (AUC) was calculated using the linear trapezoidal rule with calculation to the last quantifiable data point, and with extrapolation to infinity if applicable. Plasma half-life (t1/2) was calculated from 0.693/slope of the terminal elimination phase. Mean residence time, MRT, was calculated by dividing the area under the moment curve (AUMC) by the AUC. Bioavailability was determined by dividing the individual dose-normalized PO AUClast values by the average dose-normalized IV AUClast value from study 18CARNP11. Any samples below the limit of quantitation (1.00 ng/mL) were treated as zero for pharmacokinetic data analysis.









TABLE 2







Individual and Average Plasma Concentrations (ng/mL) for 13C4-Succinate


After Subcutaneous Administration at 10 mg/kg in Male Sprague-Dawley Rats


Subcutaneuus (10 mg/kg)










Rat #













Time (hr)
776
777
778
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.25
5090
2090
3260
3480
1512


0.50
1280

854

1280
1138
246


1.0
430

220

415
355
117


2.0
28.5

10.6

23.2
20.8
9.19


4.0
BLOQ

3.57

11.6
7.59
ND


8.0
6.63
BLOQ
BLOQ
ND
ND


Animal Weight (kg)
0.263
0.262
0.275
0.267
0.007


Volume Dosed (mL)
1.32
1.31
1.38
1.34
0.04


Cmax (ng/mL)
5090
2090
3260
3480
1512


tmax (hr)
0.25
0.25
0.25
0.25
0.00


t1/2 (hr)
ND3
0.453
ND3
ND
ND


MRTlast (hr)
0.503
0.489
0.527
0.506
0.0194


AUClast (hr · ng/mL)
2131
1027
1653
1604
554


AUC (hr · ng/mL)
ND3
1030
ND3
ND
ND


Dose-normalized


Values1


AUClast
2.13
103
165
160
55.4


(hr · kg · ng/mL/mg)


AUC
ND3
103
ND3
ND
ND


(hr · kg · ng/mL/mg)


Bioavailability (%)2
98.9
47.7
76.7
74.4
25.7





Cmax: maximum plasma concentration; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Dose-normalized by dividing the parameter by the nominal dose in mg/kg.




2Bioavailability determined by dividing the individual oral dose-normalized AUClast values by the average IV dose normalized AUClast value 215 hr*kg*ng/mL/mg from previous study.




3Not determined because the line defining the terminal elimination phase had an r2 < 0.85.








FIG. 1 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after subcutaneous administration of 13C4-succinate at 10 mg/kg.



FIG. 2 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after subcutaneous administration of 13C4-succinate at 10 mg/kg.









TABLE 3







Individual and Average Plasma Concentrations (ng/mL) for 13C4-Succinate


After Subcutaneous Administration at 50 mg/kg in Male Sprague-Dawley Rats


Subcutaneous (50 mg/kg)










Rat #













Time (hr)
779
780
781
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.25
14800
18300
18900
17333
2214


0.50
9750
15500
11100
12117
3007


1.0
1020
2420
2020
1820
721


2.0
102
163
122
129
31.1


4.0
15.1
10.3
12.3
12.6
2.41


8.0
42.8
8.84
4.69
18.8
20.9


Animal Weight (kg)
0.275
0.265
0.255
0.265
0.010


Volume Dosed (mL)
1.38
1.33
1.28
1.33
0.05


Cmax (ng/mL)
14800
18300
18900
17333
2214


tmax (hr)
0.25
0.25
0.25
0.25
0.00


t1/2 (hr)
ND3
ND3
ND3
ND
ND


MRTlast (hr)
0.558
0.530
0.505
0.531
0.0267


AUClast (hr · ng/mL)
8405
12496
10632
10511
2048


AUC (hr · ng/mL)
ND3
ND3
ND3
ND
ND


Dose-normalized


Values1


AUClast
168
250
213
210
41.0


(hr · kg · ng/mL/mg)


AUC
ND3
ND3
ND3
ND
ND


(hr · kg · ng/mL/mg)


Bioavailability (%)2
78.0
116
98.7
97.6
19.0





Cmax: maximum plasma concentration; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Dose-normalized by dividing the parameter by the nominal dose in mg/kg.




2Bioavailability determined by dividing the individual oral dose-normalized AUClast values by the average IV dose normalized AUClast value 215 hr*kg*ng/mL/mg from previous study.




3Not determined because the line defining the terminal elimination phase had an r2 < 0.85.








FIG. 3 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after subcutaneous administration of 13C4-succinate at 50 mg/kg.



FIG. 4 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after subcutaneous administration of 13C4-succinate at 50 mg/kg.









TABLE 4







Individual and Average Plasma Concentrations (ng/mL) for 13C4-Succinate After


Subcutaneous Administration at 100 mg/kg in Male Sprague-Dawley Rats


Subcutaneous (100 mg/kg)










Rat #













Time (hr)
782
783
784
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.25
37900
23100
32000
31000
7451


0.50
24500

13900

25200
21200
6332


1.0
6840

4980

7750
6523
1412


2.0

364


435

779
526
222


4.0

103


40.8

52.9
65.6
33.0


8.0

17.7


10.5

49.5
25.9
20.8


Animal Weight (kg)
0.257
0.258
0.271
0.262
0.008


Volume Dosed (mL)
1.29
1.29
1.36
1.31
0.0


Cmax (ng/mL)
37900
23100
32000
31000
7451


tmax (hr)
0.25
0.25
0.25
0.25
0.00


t1/2 (hr)
1.40
0.747
ND3
1.07
ND


MRTlast (hr)
0.596
0.628
0.660
0.628
0.0323


AUClast (hr · ng/mL)
24683
15518
24689
21630
5293


AUC (hr · ng/mL)
24719
15530
ND3
20124
ND


Dose-normalized


Values1


AUClast
247
155
247
216
52.9


(hr · kg · ng/mL/mg)


AUC
247
155
ND3
201
ND


(hr · kg · ng/mL/mg)


Bioavailability (%)2
115
72.0
115
100
24.6





Cmax: maximum plasma concentration; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Dose-normalized by dividing the parameter by the nominal dose in mg/kg.




2Bioavailability determined by dividing the individual oral dose-normalized AUClast values by the average IV dose normalized AUClast value 215 hr*kg*ng/mL/mg from previous study.




3Not determined because the line defining the terminal elimination phase had an r2 < 0.85.








FIG. 5 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after subcutaneous administration of 13C4-succinate at 100 mg/kg.



FIG. 6 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after subcutaneous administration of 13C4-succinate at 100 mg/kg.


Standard Preparation


Standards were prepared in Sprague-Dawley rat plasma containing sodium heparin as the anticoagulant. Working solutions were prepared in 50:50 acetonitrile:water and then added to the rat plasma to make calibration standards to final concentrations of 2000, 1000, 500, 100, 50.0, 10.0, 5.00, and 1.00 ng/mL. Standards were treated identically to the study samples


Sample Extraction


Plasma samples were manually extracted using acetonitrile in a 96-well plate as outlined in Table 5.









TABLE 5







Preparation of Plasma Samples








Step
Procedure





1
Standards: Add 10 μL of appropriate working solution to 50 μL



of blank plasma.



Blanks: Add 10 μL 50:50 acetonitrile:water to 50 μL of blank



plasma.



Samples: Add 10 μL 50:50 acetonitrile:water to 50 μL of study



sample.



Cap and mix.


2
Add 150 μL of acetonitrile containing 100 ng/mL of warfarin as



internal standard.



Cap and vortex well.


3
Centrifuge samples at 3000 rpm for 5 minutes.


4
Evaporate 100 μL of supernatant and reconstitute with 100 μL



of Milli-Q water.












Example 2: Effects of Citrate and Succinate on Basal Respiration


FIG. 7 is graph showing the effects of citrate and succinate on basal respiration in cells from a patient with propionic acidemia (PA). Fibroblasts from a normal patient (sample 826) and fibroblasts from a patient with PA were cultured for 72 hours in culture medium alone, culture medium supplemented with 0.2 mM citrate, or culture medium supplemented with 4 mM succinate, as indicated. Oxygen consumption rate (OCR) was measured with an XFe96 Extracellular Flux Analyzer, Seahorse Bioscience. Data shown are mean values±SD and are normalized to protein amount mean value. ****P<0.0001,**P<0.01 compared between the groups shown are calculated in GraphPad Prism 7 using unpaired t test for samples from a single biological replicate and 8 technical replicates.


Example 3: Pharmacokinetics, Excretion, and Tissue Distribution of Orally-Administered Citrate or Intravenously-Administered Succinate

Summary


The plasma-time course, routes and rates of excretion, and tissue distribution of radioactivity following a single oral dose of 14C-labeled citrate or single oral dose of 14C-labeled succinate were analyzed in rats.


Dose Formulation and Preparation



14C-succinate and 14C-citrate were dissolved in either deionized water for oral administration or 0.9% sodium chloride for intravenous injection. Formulations were prepared on the day prior to dosing.


Test System


CD® rats were obtained from Charles River Laboratories. Animals were 9-11 weeks in age at beginning of study.


Study Design


Treatment groups are shown in Table 6.









TABLE 6







Treatment Groups














Dose
Dose
Radioactive





Level
Volume
Dose
No. of


Group
Treatment
(mg/kg)
(mL/kg)
(μCi/kg)
Animals















1

14C-succinate IV

10
1
200
6


2

14C-citrate Oral

100
5
200
6









Animals given oral 14C-citrate were kept in a fasting state for 8 hours prior to dosing and for 4 hours after dosing. 14C-citrate was given by oral gavage. Animals given intravenous 14C-succinate were not kept in a fasting state. 14C-succinate was administered by tail vein injection.


Sample Collection and Analysis


Following oral dosing, the tube and dose site were wiped with gauze, which was collected for subsequent radioanalysis. Following IV dosing, the needle and dose site were wiped with gauze, which was collected for subsequent radioanalysis. The dose site wipe total radioactivity was subtracted from the total dose administered, to determine dose loss, according to SOP ADME.


Blood and plasma were collected by cardiac puncture for terminal collection at 0.5, 1, 2, 4, 8, and 24 hours post-dose. Blood was stored on an ice block or wet ice until centrifugation to obtain plasma. Triplicate aliquots were weighed, mixed with scintillation cocktail, and counted by LSC.


Urine and feces were collected at 0-24 hours post-dose and stored on wet ice. Expired CO2 was collected at 0-8 hours and 8-24 hours post-dose by drawing air through traps containing 2 N NaOH according to MPI Research SOP. Samples were stored at ambient temperature and weighed. Aliquots were submitted for radioanalysis.


At 24 hours post-dose, cages were rinsed with a 1% trisodium phosphate (TSP) solution and wiped with gauze pads. The final cage rinse samples and cage wipe samples were collected into separate appropriate containers, and the weight of each cage rinse and cage wipe were recorded.


Samples were analyzed for radioactivity by liquid scintillation counting (LSC) for at least 5 minutes or 100,000 cumulative counts. Samples were analyzed in triplicate.


At 0.5, 1, 2, 4, 8, and 24 hours post-dose, after terminal blood collections, euthanized animals were frozen in a hexane/dry ice bath and embedded in a 5% carboxymethylcellulose matrix according to MPI Research SOP IMG-23.


Embedded carcasses were sectioned according to MPI Research SOP EQP-145 on a Leica CM3600 Cyromacrotome set to maintain −10 to −30° C. Sections of approximately 30 μm thickness were taken in the sagittal plane. Appropriate sections selected at various levels of interest in the block were collected to encompass the following tissues, organs, and biological fluids, where possible: adrenal gland, bladder and contents (urine), blood (cardiac), bone, bone marrow, brain, epididymis, eye, fat (brown), fat (white), heart, kidney, large intestine/cecum and contents, liver, lung, muscle, pancreas, prostate/uterus, salivary glands, skin, small intestine and contents, spleen, stomach and contents, testes/ovaries, thymus, thyroid, and mesenteric lymph nodes. Sections were mounted, exposed to phosphor imaging screens, and scanned at 50 μm using the Storm 860 image acquisition system according to MPI Research SOP EQP-146.


Quantification, relative to the calibration standards, was performed by image densitometry using MCID™ image analysis software according to MPI Research SOP IMG-24. A standard curve was constructed from the integrated response (MDC/mm2) and the nominal concentrations of the [14C]calibration standards. The concentrations of radioactivity were expressed as μCi/g and converted to μg or ng equivalents of [14C]Test Article per gram sample (ng-eq/g or μg-eq/g) using the specific activity of administered [14C]Test Article dose formulation. A lower limit of quantification (LLOQ) was applied to the data. The LLOQ was determined using the radioactive concentration of the lowest calibration standard used to generate a calibration curve divided by the specific activity of the dose formulation (μCi/mg). Artifacts, such as those produced by dislodged contents of the alimentary canal, were excluded from analysis during image analysis.


Samples were stored as indicated in Table 7.









TABLE 7







Sample Storage Conditions











Sample
Storage Condition (range)
Comments







Blood
Wet ice prior to preparing
Discard cell pellet




plasma



Plasma
Frozen (−10 to −30° C.)



Urine
Frozen (−10 to −30° C.)



Feces
Frozen (−10 to −30° C.)



Cage Rinses
Ambient
Discard following





analysis



Cage Wipes
Ambient
Discard following





analysis



Carcasses
Frozen (−10 to −30° C.)
Carcasses for





QWBA



Dose Site
Ambient
Discard following



Wipes

analysis



Expired Air
Ambient










Results


The percentages of radioactivity recovered in various samples from animals sacrificed 24 hours after treatment with either a single dose of oral 14C-citrate or a single dose of intravenous 14C-succinate are shown in Table 8.









TABLE 8







Percentage Recovery of Radioactive Dose













14C-succinate


14C-citrate





IV Treatment,
Oral Treatment,




Subject 1006
Subject 2006


Sample
Timepoint
(% recovery)
(% recovery)














Expired trap 1
0-8
hr
54.8
2006


Expired trap 1
0-8
hr
4.6
40.0


Expired trap 1
0-8
hr
0.4
16.4


Subtotal


59.8
2.7


Expired trap 1
0-8
hr
1.3
59.1


Expired trap 1
0-8
hr
0.7
1.2


Expired trap 1
0-8
hr
0.3
0.9


Subtotal


2.3
0.4


Urine
0-24
hr
2.9
5.1


Feces
0-24
hr
0.2
0.4


Cage rinse
0-24
hr
0.1
0.1


Cage wipe
24
hr
0.0
0.0










Total
Total
65.265
67.285









The plasma concentrations of radioactive material in rats treated with either a single dose of oral 14C-citrate or a single dose of intravenous 14C-succinate are shown in Table 9.









TABLE 9







Plasma Concentrations of Radioactive Material















Concentration


Treatment
Subject
Sample
Time
(ng-equivalents/g)
















14C-succinate IV

1001
Plasma
30
min
2809



14C-succinate IV

1002
Plasma
1
hr
2996



14C-succinate IV

1003
Plasma
2
hr
1466



14C-succinate IV

1004
Plasma
4
hr
1158



14C-succinate IV

1005
Plasma
8
hr
813



14C-succinate IV

1006
Plasma
24
hr
511



14C-citrate Oral

2001
Plasma
30
min
32073



14C-citrate Oral

2002
Plasma
1
hr
31322



14C-citrate Oral

2003
Plasma
2
hr
26187



14C-citrate Oral

2004
Plasma
4
hr
21812



14C-citrate Oral

2005
Plasma
8
hr
16472



14C-citrate Oral

2006
Plasma
24
hr
6762









The concentrations of radioactivity in blood and tissues in rats treated with a single dose of intravenous 14C-succinate are shown in Table 10.









TABLE 10







Radioactivity in Tissues of Rats Treated with IV 14C-Succinate









ng Equivalents test article/g



Animal Number (Timepoint)














1001
1002
1003
1004
1005
1006


Tissue
(0.5 Hour)
(1 Hour)
(2 Hours)
(4 Hours)
(8 Hours)
(24 Hours)
















Adrenal gland
4060 
1441
1188
1192
840
581


Blood
891
1398
912
BLQ
BLQ
BLQ


Bone
3128 
3200
1989
2330
2042 
1322 


Bone marrow
1314 
1750
1398
1419
1019 
769


Cecum
BLQ
BLQ
BLQ
BLQ
BLQ
BLQ


Cecum contents
540
882
757
750
806
BLQ


Cerebellum
709
847
529
503
BLQ
BLQ


Cerebrum
596
853
477
543
348
BLQ


Epididymis
699
785
442
BLQ
BLQ
BLQ


Eye
569
584
371
413
BLQ
BLQ


Fat (brown)
996
BLQ
BLQ
BLQ
BLQ
BLQ


Fat (white)
BLQ
BLQ
BLQ
348
BLQ
BLQ


Harderian gland
BLQ
1983
1478
BLQ
BLQ
BLQ


Kidney
3154 
3060
2704
2075
2031 
1120 


Lacrimal gland (Ex-orbital)
BLQ
1557
1655
1993
1388 
BLQ


Lacrimal gland (Intra-orbital)
BLQ
2323
1355
BLQ
BLQ
BLQ


Large intestinal contents
BLQ
519
NR
810
593
BLQ


Large intestine
BLQ
1787
1716
1361
BLQ
BLQ


Liver
2431 
3607
2005
1561
1190 
715


Lung
920
1185
683
677
491
371


Lymph node
938
1376
NR
BLQ
BLQ
BLQ


Medulla
606
714
501
BLQ
323
BLQ


Muscle
563
732
773
638
401
341


Myocardium
1032 
1908
1058
771
496
395


Nasal turbinates
941
1302
978
1055
NR
525


Olfactory lobe
708
747
466
725
BLQ
BLQ


Pancreas
1676 
3492
2193
2404
641
385


Preputial gland
1660 
1347
1073
ND
ND
ND


Prostate gland
675
1220
1045
995
NR
497


Salivary gland
1518 
2826
2286
2458
1533 
596


Seminal vesicle
326
469
591
513
BLQ
BLQ


Skin
863
857
531
717
445
464


Small intestinal contents
715
711
847
774
400
BLQ


Small intestine
BLQ
BLQ
BLQ
BLQ
BLQ
BLQ


Spinal cord
544
715
BLQ
BLQ
394
BLQ


Spleen
788
1058
810
796
736
556


Stomach
BLQ
1798
ND
935
BLQ
BLQ


Stomach contents
BLQ
BLQ
BLQ
BLQ
BLQ
BLQ


Testes
475
580
410
583
BLQ
BLQ


Thymus
801
1212
838
NR
654
596


Thyroid gland
ND
4809
3675
NR
644
589


Urine
3531 
5000
3016
1974
BLQ
BLQ





BLQ: Below limit of quantitation (<320 ng equivalents test article/g).


ND: Not detectable (sample shape not discernible from background or surrounding tissue).


NR: Not represented (tissue not represented on section).






The concentrations of radioactivity in blood and tissues in rats treated with a single dose of oral 14C-citrate are shown in Table 11.









TABLE 11







Radioactivity in Tissues of Rats Treated with Ora 14C-Citrate









ng Equivalents test article/g



Animal Number (Timepoint)














2001
2002
2003
2004
2005
2006


Tissue
(0.5 Hour)
(1 Hour)
(2 Hours)
(4 Hours)
(8 Hours)
(24 Hours)
















Adrenal gland
NR
20538
17413
13375
15645
10316 


Blood
15935
12808
11183
8800
BLQ
BLQ


Bone
49396
58936
43368
42499
47959
17943 


Bone marrow
9150
18940
21841
20023
21000
11005 


Cecum
BLQ
ND
ND
21290
ND
BLQ


Cecum contents
3593
7501
9083
37320
8242
4081


Cerebellum
5447
5944
6952
5953
4300
3183


Cerebrum
4464
5907
6789
5659
4073
3231


Epididymis
4469
6854
6691
7917
6583
4188


Esophageal contents
3395667
NR
455859
NR
BLQ
BLQ


Eye
BLQ
3086
4533
6017
BLQ
BLQ


Fat (brown)
BLQ
BLQ
BLQ
BLQ
BLQ
BLQ


Fat (white)
BLQ
BLQ
BLQ
BLQ
BLQ
BLQ


Harderian gland
7011
NR
17809
22082
30362
11021 


Kidney
31411
35017
25508
21332
17379
8211


Lacrimal gland (Ex-orbital)
9751
13243
16362
21167
17875
7542


Lacrimal gland (Intra-orbital)
NR
27199
23343
20093
22551
NR


Large intestinal contents
3638
4169
5302
11545
12377
5971


Large intestine
BLQ
16238
15856
28662
11353
BLQ


Liver
35567
34866
31094
22356
20156
10050 


Lung
11418
11240
10832
8280
6727
4911


Lymph node
BLQ
BLQ
BLQ
BLQ
BLQ
BLQ


Medulla
4578
6118
7787
6270
4556
3479


Muscle
3783
5745
4737
4311
3965
3490


Myocardium
7466
8932
9941
7845
5336
4390


Nasal turbinates
12703
12918
14959
24265
9529
NR


Olfactory lobe
NR
5917
8491
8727
NR
4121


Pancreas
22855
49518
48038
52562
13125
5990


Preputial gland
ND
ND
ND
ND
ND
ND


Prostate gland
4912
8819
8011
12828
7804
7448


Salivary gland
12638
24116
28408
35370
33304
6456


Seminal vesicle
3710
4087
5590
NR
8840
NR


Skin
7114
10352
9019
8095
7843
6049


Small intestinal contents
765641
155596
79444
61651
25276
4687


Small intestine
ND
11950
ND
ND
ND
21231 


Spinal cord
3633
4913
6114
6416
5079
3837


Spleen
8138
11559
12833
11528
14371
7745


Stomach
120191
57312
20761
14630
ND
6169


Stomach contents
3239644
1081479
856445
88064
BLQ
BLQ


Testes
3146
5217
5382
5009
4224
3751


Thymus
5369
9433
10568
10357
10658
8768


Thyroid gland
6773
22240
9678
5807
NR
BLQ


Urine
54074
145954
NR
119053
NR
3684





BLQ: Below limit of quantitation (<320 ng equivalents test article/g).


ND: Not detectable (sample shape not discernible from background or surrounding tissue).


NR: Not represented (tissue not represented on section).






Example 4: Oral Bioavailability of Succinate

Summary


The oral bioavailability of 13C4-succinate was evaluated in male Sprague-Dawley rats. 13C4-succinate was dosed by intravenous (IV) and oral (PO) routes of administration at 10 mg/kg and 50 mg/kg, respectively. Blood samples were collected up to 8 hours post-dose, and plasma concentrations of the test articles were determined by LC-MS/MS. Pharmacokinetic parameters were determined using Phoenix WinNonlin (v8.0) software.


Following IV dosing of 13C4-succinate at 10 mg/kg, the average half-life was 2.46±2.04 hours. Its average clearance rate was 4.61±0.341 L/hr/kg. The average volume of distribution was 0.982±0.584 L/kg. Following PO dosing of 13C4-succinate at 50 mg/kg, maximum plasma concentrations (average of 211±186 ng/mL) were observed at 15 minutes post dosing. The average half-life following oral dosing could not be determined because the correlation coefficient (r2) was less than 0.85, or due to a lack of quantifiable data points trailing the Cmax. The average exposure based on the dose-normalized AUClast was 1.84±1.58 hr*kg*ng/mL/mg. The average oral bioavailability of 13C4-succinate after dosing at 50 mg/kg was 0.854±0.735%.


Observations and Adverse Reactions


No adverse reactions were observed following intravenous and oral dosing of 13C4-succinate in male Sprague-Dawley rats.


Dosing Solution Analysis


The dosing solutions were analyzed by LC-MS/MS. The measured dosing solution concentrations are shown in Table 12. The dosing solutions were diluted into rat plasma and analyzed in triplicate. All concentrations are expressed as mg/mL of the free base. The nominal dosing level was used in all calculations.









TABLE 12







Measured Dosing Solution Concentrations (mg/mL)















Nominal
Measured




Route of

Dosing
Dosing


Test
Adminis-

Conc.
Conc.
% of


Article
tration
Vehicle
(mg/mL)
(mg/mL)
Nominal
















13C4-

IV
D5W*
2
2.06
103


succinate
PO
Water
10
9.7
97.0





*5% dextrose solution






Quantitative Plasma Sample Analysis


Plasma samples were extracted and analyzed using the methods described in the section on Sample Extraction. Individual and average plasma concentrations are shown in Table 13 and Table 14. All data are expressed as ng/mL of the free base. Samples that were below the limit of quantification were not used in the calculation of averages. Concentrations versus time data are plotted in FIGS. 8-11.


Data Analysis


Pharmacokinetic parameters were calculated from the time course of the plasma concentration and are presented in Table 13 and Table 14. Pharmacokinetic parameters were determined with Phoenix WinNonlin (v8.0) software using a non-compartmental model. The maximum plasma concentrations (C0) after IV dosing were estimated by extrapolation of the first two time points back to t=0. The maximum plasma concentration (Cmax) and the time to reach maximum plasma concentration (Tmax) after PO dosing were observed from the data. The area under the time concentration curve (AUC) was calculated using the linear trapezoidal rule with calculation to the last quantifiable data point, and with extrapolation to infinity if applicable. Plasma half-life (t1/2) was calculated from 0.693/slope of the terminal elimination phase. Mean residence time, MRT, was calculated by dividing the area under the moment curve (AUMC) by the AUC. Clearance (CL) was calculated from dose/AUC. Steady-state volume of distribution (Vss) was calculated from CL*MRT (mean residence time). Bioavailability was determined by dividing the individual dose-normalized PO AUClast values by the average dose-normalized IV AUClast value. Any samples below the limit of quantitation (1 ng/mL) were treated as zero for pharmacokinetic data analysis.









TABLE 13







Individual and Average Plasma Concentrations (ng/mL) and


Pharmacokinetic Parameters for 13C4-succinate After Intravenous


Administration at 10 mg/kg in Male Sprague-Dawley Rats


Intravenous (10 mg/kg)









Rat #












Time (hr)
Rat 598
Rat 599
Rat 600
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.083
8050
6880
8410
7780
800


0.25
1070
702
1940
1237
636


0.50
91.0
99.8
144
112
28.4


1.0

27.0


9.43


29.5

22.0
10.,9


2.0

10.3


9.06


19.9

13.1
5.93


4.0

4.79


6.25


6.15

5.73
0.816


8.0
BLOQ
BLOQ
BLOQ
ND
ND


Animal Weight (kg)
0.294
0.298
0.310
0.301
0.008


Volume Dosed (mL)
1.47
1.49
1.55
1.50
0.04


C0 (ng/mL)1
21947
21392
17434
20257
2461


tmax (hr)1
0
0
0
0
0


t1/2 (hr)
1.26
4.81
1.30
2.46
2.04


MRTlast (hr)
0.102
0.0949
0.140
0.113
0.0244


CL (L/hr/kg)
4.50
5.00
4.34
4.61
0.341


Vss (L/kg)
0.561
1.65
0.735
0.982
0.584


AUClast (hr · ng/mL)
2215
1958
2291
2155
174


AUC (hr · ng/mL)
2223
2902
2303
2176
156


Dose-normalized Values2


AUClast (hr · kg · ng/mL/mg)
221
196
229
215
17.4


AUC (hr · kg · ng/mL/mg)
222
290
230
218
15.6





C0: maximum plasma concentration extrapolated to t = 0; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; CL: clearance; Vss: steady state volume of distribution; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Extrapolated to t = 0.




2Dose-normalized by dividing the parameter by the nominal dose in mg/kg.








FIG. 8 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after intravenous administration of 13C4-succinate at 10 mg/kg.



FIG. 9 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after intravenous administration of 13C4-succinate at 10 mg/kg.









TABLE 14







Individual and Average Plasma Concentrations (ng/mL) for 13C4-succinate


After Oral Administration at 50 mg/kg in Male Sprague-Dawley Rats


Oral (50 mg/kg)









Rat #












Time (hr)
Rat 601
Rat 602
Rat 603
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.25
186
37.5
408
211
186


0.50
75.4
27.8
186
96.4
81.2


1.0
3.78
3.00
5.66
4.15
1.37


2.0
1.29
BLOQ
2.25
1.77
ND


4.0
BLOQ
BLOQ
BLOQ
ND
ND


8.0
BLOQ
BLOQ
BLOQ
ND
ND


Animal Weight (kg)
0.285
0.311
0.311
0.302
0.015


Volume Dosed (mL)
1.43
1.56
1.56
1.52
0.08


Cmax (ng/mL)
186
37.5
408
211
186


tmax (hr)
0.25
0.25
0.25
0.25
0.00


t1/2 (hr)
ND3
ND4
ND3
ND
ND


MRTlast (hr)
0.382
0.404
0.378
0.388
0.0143


AUClast (hr · ng/mL)
78.3
20.6
177
92.0
79.2


AUC (hr · ng/mL)
ND3
ND4
ND3
ND
ND


Dose-normalized


Values1


AUClast
1.57
0.411
3.54
1.84
1.58


(hr · kg · ng/mL/mg)


AUC
ND3
ND4
ND3
ND
ND


(hr · kg · ng/mL/mg)


Bioavailability (%)2
0.726
0.191
1.64
0.854
0.735





Cmax: maximum plasma concentration; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Dose-normalized by dividing the parameter by the nominal dose in mg/kg.




2Bioavailability determined by dividing the individual oral AUClast values by the average IV AUClast value.




3Not determined because the line defining the terminal elimination phase had an r2 < 0.85.




4Not determined due to a lack of quantifiable data points trailing the Cmax.








FIG. 10 is a graph of plasma concentration of 13C4-succinate at various time points in individual rats after oral administration of 13C4-succinate at 50 mg/kg.



FIG. 11 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after oral administration of 13C4-succinate at 50 mg/kg.


Analytical Stock Solution Preparation


Analytical stock solutions (1.00 mg/mL of the free drug) were prepared in DMSO.


Standard Preparation


Standards were prepared in Sprague-Dawley rat plasma containing sodium heparin as the anticoagulant. Working solutions were prepared in 50:50 acetonitrile:water and then added to the rat plasma to make calibration standards to final concentrations of 2000, 1000, 500, 100, 50.0, 10.0, 5.00, 2.50, and 1.00 ng/mL. Standards were treated identically to the study samples.


Sample Extraction


Plasma samples were manually extracted using acetonitrile in a 96-well plate as outlined in Table 15.









TABLE 15







Preparation of Plasma Samples








Step
Procedure





1
Standards: Add 10 μL of appropriate working solution to 50 μL



of blank plasma.



Blanks: Add 10 μL 50:50 acetonitrile:water to 50 μL of blank



plasma.



Samples: Add 10 μL 50:50 acetonitrile:water to 50 μL of study



sample.



Cap and mix.


2
Add 150 μL of acetonitrile containing 100 ng/mL of warfarin as



internal standard.



Cap and vortex well.


3
Centrifuge samples at 3000 rpm for 5 minutes.


4
Evaporate 100 μL of supernatant and reconstitute with 100 μL



of Milli-Q water.












Example 5: Oral Bioavailability of Citrate

Summary


The oral bioavailability of 13C6-citrate was evaluated in male Sprague-Dawley rats. 13C6-citrate was dosed by intravenous (IV) and oral (PO) routes of administration at 10 mg/kg and 50 mg/kg, respectively. Blood samples were collected up to 8 hours post-dose, and plasma concentrations of the test articles were determined by LC-MS/MS. Pharmacokinetic parameters were determined using Phoenix WinNonlin (v8.0) software.


Following IV dosing of 13C6-citrate at 10 mg/kg, the average half-life was 2.34±0.207 hours. Its average clearance rate was 2.96±0.345 L/hr/kg. The average volume of distribution was 1.75±0.223 L/kg. Following PO dosing of 13C6-citrate at 50 mg/kg, maximum plasma concentrations (average of 1580±191 ng/mL) were observed at 15 minutes post dosing. The average half-life following oral dosing could not be determined; however, the half-life for one rat was 0.865 hours. The average exposure based on the dose-normalized AUClast was 33.2±10.9 hr*kg*ng/mL/mg. The average oral bioavailability of 13C6-citrate after dosing at 50 mg/kg was 9.86±3.24%.


Observations and Adverse Reactions


No adverse reactions were observed following intravenous and oral dosing of 13C6-citrate in male Sprague-Dawley rats.


Dosing Solution Analysis


The dosing solutions were analyzed by LC-MS/MS. The measured dosing solution concentrations are shown in Table 16. The dosing solutions were diluted into rat plasma and analyzed in triplicate. All concentrations are expressed as mg/mL of the free base. The nominal dosing level was used in all calculations.









TABLE 16







Measured Dosing Solution Concentrations (mg/mL)















Nominal
Measured




Route of

Dosing
Dosing


Test
Adminis-

Conc.
Conc.
% of


Article
tration
Vehicle
(mg/mL)
(mg/mL)
Nominal
















13C6-

IV
D5W*
2
2.40
120


Citrate
PO
Water
10
8.73
87.3





*5% dextrose solution






Quantitative Plasma Sample Analysis


Plasma samples were extracted and analyzed using the methods described in the section on Sample Extraction. Individual and average plasma concentrations are shown in Table 17 and Table 18. All data are expressed as ng/mL of the free base. Samples that were below the limit of quantification were not used in the calculation of averages. Concentrations versus time data are plotted in FIGS. 12-15.


Data Analysis


Pharmacokinetic parameters were calculated from the time course of the plasma concentration and are presented in Table 17 and Table 18. Pharmacokinetic parameters were determined with Phoenix WinNonlin (v8.0) software using a non-compartmental model. The maximum plasma concentrations (C0) after IV dosing were estimated by extrapolation of the first two time points back to t=0. The maximum plasma concentration (Cmax) and the time to reach maximum plasma concentration (Tmax) after PO dosing were observed from the data. The area under the time-concentration curve (AUC) was calculated using the linear trapezoidal rule with calculation to the last quantifiable data point, and with extrapolation to infinity if applicable. Plasma half-life (t1/2) was calculated from 0.693/slope of the terminal elimination phase. Mean residence time, MRT, was calculated by dividing the area under the moment curve (AUMC) by the AUC. Clearance (CL) was calculated from dose/AUC. Steady-state volume of distribution (Vss) was calculated from CL*MRT (mean residence time). Bioavailability was determined by dividing the individual dose-normalized PO AUClast values by the average dose-normalized IV AUClast value. Any samples below the limit of quantitation (1 ng/mL) were treated as zero for pharmacokinetic data analysis.









TABLE 17







Individual and Average Plasma Concentrations (ng/mL) and


Pharmacokinetic Parameters for 13C6-citrate After Intravenous


Administration at 10 mg/kg in Male Sprague-Dawley Rats


Intravenous (10 mg/kg)








Time
Rat #












(hr)
Rat 488
Rat 480
Rat 490
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.083
9380
7270
8540
8397
1062


0.25
4780
3180
3550
3837
838


0.50
733
1190
1960
1294
620


1.0
316
388
511
405
98.6


2.0

79.5


56.6


81.7

72.6
13.9


4.0

27.0


31.2


25.5

27.9
2.95


8.0

14.2


8.99


11.0

11.4
2.63


Animal Weight (kg)
0.290
0.293
0.292
0.292
0.002


Volume Dosed (mL)
1.45
1.47
1.46
1.46
0.01


C0 (ng/mL)1
13113
10965
13211
12430
1269


tmax (hr)1
0
0
0
0
0


t1/2 (hr)
2.58
2.26
2.19
2.34
0.207


MRTlast (hr)
0.437
0.488
0.474
0.466
0.0259


CL (L/hr/kg)
2.85
3.34
2.68
2.96
0.345


Vss (L/kg)
1.73
1.98
1.54
1.75
0.223


AUClast (hr · ng/mL)
3454
2961
3695
3370
374


AUC (hr · ng/mL)
3507
2999
3730
3409
380


Dose-normalized Values2


AUClast (hr · kg · ng/mL/mg)
345
296
370
337
37.4


AUC (hr · kg · ng/mL/mg)
351
299
373
341
38.0





C0: maximum plasma concentration extrapolated to t = 0; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; CL: clearance; Vss: steady state volume of distribution; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Extrapolated to t = 0.




2Dose-normalized by dividing the parameter by the nominal dose in mg/kg.








FIG. 12 is a graph of plasma concentration of 13C6-citrate at various time points in individual rats after intravenous administration of 13C6-citrate at 10 mg/kg.



FIG. 13 is a graph of average plasma concentration of 13C6-citrate at various time points in rats after intravenous administration of 13C6-citrate at 10 mg/kg.









TABLE 18







Individual and Average Plasma Concentrations (ng/mL) for 13C6-citrate After


Oral Administration at 50 mg/kg in Male Sprague-Dawley Rats


Oral (50 mg/kg)









Rat #












Time (hr)
Rat 491
Rat 492
Rat 493
Mean
SD





0 (pre-dose)
BLOQ
BLOQ
BLOQ
ND
ND


0.25
1800
1470
1470
1580
191


0.50

1770

1440
909
1373
434


1.0

1090

740
420
750
335


2.0

147

98.6
44.4
96.7
51.3


4.0

16.5

11.6
7.06
11.7
4.72


8.0

4.43

4.72
4.14
4.43
0.290


Animal Weight (kg)
0.286
0.281
0.278
0.282
0.004


Volume Dosed (mL)
1.43
1.41
1.39
1.41
0.02


Cmax (ng/mL)
1800
1470
1470
1580
191


tmax (hr)
0.25
0.25
0.25
0.25
0.00


t1/2 (hr)
0.865
ND3
ND3
ND
ND


MRTlast (hr)
0.892
0.863
0.770
0.841
0.0640


AUClast (hr · ng/mL)
2210
1655
1119
1661
545


AUC (hr · ng/mL)
2216
ND3
ND3
ND
ND


Dose-normalized Values1


AUClast (hr · kg · ng/mL/mg)
44.2
33.1
22.4
33.2
10.9


AUC (hr · kg · ng /mL/mg)
44.3
ND3
ND3
ND
ND


Bioavailability (%)2
13.1
9.82
6.64
9.86
3.24





Cmax: maximum plasma concentration; tmax: time of maximum plasma concentration; t1/2: half-life, data points used for half-life determination are in bold; MRTlast: mean residence time, calculated to the last observable time point; AUClast: area under the curve, calculated to the last observable time point; AUC: area under the curve, extrapolated to infinity; ND: not determined; BLOQ: below the limit of quantitation (1 ng/mL).



1Dose-normalized by dividing the parameter by the nominal dose in mg/kg.




2Bioavailability determined by dividing the individual oral AUClast values by the average IV AUClast value.




3Not determined because the line defining the terminal elimination phase had an r2 < 0.85.








FIG. 14 is a graph of plasma concentration of 13C6-Citrate at various time points in individual rats after oral administration of 13C6-Citrate at 50 mg/kg.



FIG. 15 is a graph of average plasma concentration of 13C4-succinate at various time points in rats after oral administration of 13C6-Citrate at 50 mg/kg.


Analytical Stock Solution Preparation


Analytical stock solutions (1.00 mg/mL of the free drug) were prepared in DMSO.


Standard Preparation


Standards were prepared in Sprague-Dawley rat plasma containing sodium heparin as the anticoagulant. Working solutions were prepared in 50:50 acetonitrile:water and then added to the rat plasma to make calibration standards to final concentrations of 2000, 1000, 500, 100, 50.0, 10.0, 5.00, 2.50, and 1.00 ng/mL. Standards were treated identically to the study samples.


Sample Extraction


Plasma samples were manually extracted using acetonitrile in a 96-well plate as outlined in Table 19.









TABLE 19







Preparation of Plasma Samples








Step
Procedure





1
Standards: Add 10 μL of appropriate working solution to 50 μL



of blank plasma.



Blanks: Add 10 μL 50:50 acetonitrile:water to 50 μL of blank



plasma.



Samples: Add 10 μL 50:50 acetonitrile:water to 50 μL of study



sample.



Cap and mix.


2
Add 150 μL of acetonitrile containing 100 ng/mL of warfarin as



internal standard.



Cap and vortex well.


3
Centrifuge samples at 3000 rpm for 5 minutes.


4
Evaporate 100 μL of supernatant and reconstitute with 100 μL



of Milli-Q water.












Example 6: Solubility of Citric Acid in Lysine-Buffered Solutions

The effect of lysine buffers on the solubility of citric acid at various pH values was analyzed. Results are shown in Table 20.









TABLE 20







Solubility of Citric Acid in Lysine-buffered Solutions

















Final citric


Molar ratio of
Citric



acid


citric
acid
L-lysine
Water
Final
concentration


acid:lysine
(mg)
(mg)
(mL)
pH
(mg/mL)















1:1
213
163
0.5
3.5
426


1:2
214
318
0.5
4.8
428



1:2.5

256
492
0.6
5.6
427


1:3
212
474
0.8
6.4
265


1:4
216
639
1
9.4
216









Example 7: Citrate-Containing Formulations

Citrate-containing containing formulations according to embodiments of the invention are provided in Table 21.









TABLE 21







Citrate-containing Formulations










Mass (g)












Component
Formula 1
Formula 2















monosodium citrate
1.35
5.4



monopotassium citrate
0.22
1.475



citric acid
33.61
28.91



L-lysine, free base
25.69
22.1



sucrose
7.5
7.5










Incorporation by Reference

References and citations to other documents, such as patents, patent applications, patent publications, journals, books, papers, web contents, have been made throughout this disclosure. All such documents are hereby incorporated herein by reference in their entirety for all purposes.


EQUIVALENTS

Various modifications of the invention and many further embodiments thereof, in addition to those shown and described herein, will become apparent to those skilled in the art from the full contents of this document, including references to the scientific and patent literature cited herein. The subject matter herein contains important information, exemplification and guidance that can be adapted to the practice of this invention in its various embodiments and equivalents thereof.

Claims
  • 1-124. (canceled)
  • 125. A method of treating a condition associated with altered TCA cycle metabolism in a subject, the method comprising providing to a subject having a condition associated with altered TCA cycle metabolism a composition comprising a prodrug, analog, or derivative of succinate.
  • 126. The method of claim 125, wherein the composition is formulated for non-oral administration.
  • 127. The method of claim 126, wherein the composition is provided to the subject subcutaneously, intravenously, intraarterially, intramuscularly, intradermally, or rectally.
  • 128. The method of claim 126, wherein the composition further comprises a buffering agent in an amount to buffer a pH of the composition from about 3.0 to about 8.0.
  • 129. The method of claim 128, wherein the buffering agent comprises an amino acid.
  • 130. The method of claim 128, wherein the buffering agent comprises a metal ion.
  • 131. The method of claim 125, wherein the composition is formulated for oral administration.
  • 132. The method of claim 125, wherein the prodrug, analog, or derivative of succinate is provided at from about 1 mg/kg subject weight to about 5 g/kg subject weight.
  • 133. The method of claim 125, wherein the condition is selected from the group consisting of a disorder related to POLG mutation, an energetic disorder, glutaric acidemia type 1 or type 2, a long chain fatty acid oxidation disorder, methylmalonic acidemia (MMA), a mitochondrial associated disease, a mitochondrial encephalomyopathy lactic acidosis and stroke-like syndrome (MELAS), myoclonic epilepsy and ragged-red fibers (MERRF), mitochondrial myopathy, a mitochondrial respiratory chain deficiency, muscular dystrophy (e.g., Duchenne's muscular dystrophy and Becker's muscular dystrophy), a neurologic disorder, a pain or fatigue disease, propionic acidemia (PA), pyruvate carboxylase deficiency, refractory epilepsy, and succinyl CoA lyase deficiency.
  • 134. The method of claim 125, wherein the composition is provided in multiple doses per day.
CROSS-REFERENCE TO RELATED APPLICATIONS

This application claims the benefit of, and priority to, U.S. Provisional Application No. 62/744,251, filed Oct. 11, 2018; U.S. Provisional Application No. 62/771,289, filed Nov. 26, 2018; U.S. Provisional Application No. 62/799,064, filed Jan. 31, 2019; and U.S. Provisional Application No. 62/900,921, filed Sep. 16, 2019, the contents of each of which are incorporated herein by reference.

PCT Information
Filing Document Filing Date Country Kind
PCT/US2019/055643 10/10/2019 WO 00
Provisional Applications (4)
Number Date Country
62744251 Oct 2018 US
62771289 Nov 2018 US
62799064 Jan 2019 US
62900921 Sep 2019 US