N/A
The present invention relates to infectious diseases, and more particularly to the diagnosis, prevention and treatment of infectious diseases caused by Burkholderia infections, such as melioidosis and glanders.
The use of biological agents to deliberately inflict death or diseases on civilians is seen as a serious threat in today's society, as technologies and expertise needed for the production of biological weapons are easily accessible and significantly cheaper than standard weapons.1,2 The Centers for Disease Control and Prevention (CDC) regulate biological select agents or toxins (BSATs), which are considered to pose the highest threat to public, animal, and/or plant health. Burkholderia pseudomallei (Bp) and Burkholderia mallei (Bm), the respective etiologic agents of melioidosis and glanders, are found in endemic foci in Southeast Asia and Northern Australia, but have additionally been found sporadically worldwide.3,4 These facultative intracellular, Gram-negative bacteria (GNB) have been classified as “Tier 1” BSATs5 as a result of their ability to be effectively aerosolized, their high mortality rates (up to 50%), their laborious diagnosis, their intrinsic resistance to common antibiotics, and the current absence of licensed vaccines against them.6-8 Moreover, Bm was reportedly used during World Wars I and II whereas the use of Bp as a bioweapon has been explored by the US and former Soviet Union.9 All these facts highlight the relevance of working on the development of prophylactic measures and diagnostics against melioidosis and glanders infections.10
The treatment of melioidosis can currently be performed by the combination of many antibiotics for several weeks. However, not only does the prescribed treatment directly depends on the clinical manifestation of this polymorphic disease, making it particularly complex, but this type of treatment is also frequently unaffordable for developing countries where this disease is endemic.
Various experimental vaccines from attenuated strains of the bacterium or involving antigenic subunits have been developed in recent years, some of which being based on bacterial polysaccharides. Indeed, GNB such as Bp and Bm possess a variety of surface-exposed polysaccharides anchored in their outer membrane,11 including capsule polysaccharide (CPS) and lipopolysaccharides (LPS), which have both recently been shown to be effective in animal models. LPS are known protective antigens and virulence factors (
The need to handle Bp and Bm in safety level 3 laboratories (BSL-3) complicates the preparation of large-scale vaccines against melioidosis and glanders. In addition, the difficulty of purifying surface polysaccharides and the risks of contamination and heterogeneity represent a major obstacle to their development.
The LPS O-antigens (OAgs) of Bp and Bm are of similar composition and consist of a linear heteropolymer whose repeating unit is a disaccharide of the following structure: [→3)-6-deoxy-α-L-talopyranosyl-(1→3)-β-D-glucopyranose-(1→] (
In accordance with the present invention, there is provided:
1. A tetrasaccharide of formula I:
wherein:
2. The tetrasaccharide of claim 1, wherein R1 represents —H.
3. The tetrasaccharide of claim 1, wherein R1 represents an acetyl group.
4. The tetrasaccharide of any one of claims 1 to 3, wherein R2 represents —H.
5. The tetrasaccharide of any one of claims 1 to 4, wherein -L- represents a C2-C6 alkylene group, preferably a C5 alkylene group.
6. A conjugate comprising the tetrasaccharide of any one of claims 1 to 5 and a molecule attached to the tetrasaccharide.
7. The conjugate of claim 6, wherein the molecule is a vaccine carrier molecule.
8. The conjugate of claim 7, wherein the vaccine carrier molecule is a protein carrier.
9. The conjugate of any one of claims 6 to 8, wherein the tetrasaccharide is attached to the molecule via its amine group.
10. The conjugate of claim 9, being of formula (II):
wherein R1, R2, and L are as defined in claims 1 to 5.
11. A composition comprising the tetrasaccharide of any one of claims 1 to 5 or the conjugate of any one of claims 6 to 10.
12. The composition of claim 11, further comprising an excipient.
13. The composition of claim 11 or 12, being an immunogenic composition or a vaccine composition.
14. The composition of claim 13, further comprising a vaccine adjuvant.
15. A method for preventing a disease caused by a Burkholderia infection in a subject, the method comprising administering to the subject an effective amount of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14.
16. Use of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for preventing a disease caused by a Burkholderia infection in a subject
17. Use of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for the manufacture of a medicament for preventing a disease caused by a Burkholderia infection in a subject.
18. The tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for preventing a disease caused by a Burkholderia infection in a subject
19. A method for treating a disease caused by a Burkholderia infection in a subject, the method comprising administering to the subject an effective amount of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14.
20. Use of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for treating a disease caused by a Burkholderia infection in a subject.
21. Use of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for the manufacture of a medicament for treating a disease caused by a Burkholderia infection in a subject.
22. The tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for treating a disease caused by a Burkholderia infection in a subject.
23. A method for inducing the production of anti-Burkholderia antibodies in a subject, the method comprising administering to the subject an effective amount of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14.
24. Use of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for inducing the production of anti-Burkholderia antibodies in a subject.
25. Use of the tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for the manufacture of a medicament for inducing the production of anti-Burkholderia antibodies in a subject.
26. The tetrasaccharide of any one of claims 1 to 5, the conjugate of any one of claims 6 to 10, or the composition of any one of claims 11 to 14 for inducing the production of anti-Burkholderia antibodies in a subject
27. A method for diagnosing a Burkholderia infection in a subject, the method comprising contacting a sample from the subject with the tetrasaccharide of any one of claims 1 to 5; and detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample, wherein the presence of complexes is indicative the subject suffers from a Burkholderia infection.
28. A method for diagnosing a disease caused by a Burkholderia infection in a subject, the method comprising contacting a sample from the subject with the tetrasaccharide of any one of claims 1 to 5; and detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample, wherein the presence of complexes is indicative the subject suffers from a disease caused by a Burkholderia infection.
29. A method for detecting the presence or absence of antibodies specific for a Burkholderia bacterium in a sample from a subject, the method comprising contacting the sample with the tetrasaccharide of any one of claims 1 to 5; and detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample.
30. A kit for (i) diagnosing a Burkholderia infection or a disease caused by a Burkholderia infection in a subject; or (ii) detecting the presence or absence of antibodies specific for a Burkholderia bacterium in a sample from a subject, the kit comprising the tetrasaccharide of any one of claims 1 to 5.
31. The tetrasaccharide, use, method or kit of any one of claims 15-22 and 27-30, wherein the Burkholderia infection is an infection by Burkholderia pseudomallei (Bp) or Burkholderia mallei (Bm).
32. The tetrasaccharide, use, method or kit of claim 31, wherein the Burkholderia infection is an infection by Burkholderia pseudomallei (Bp).
33. The tetrasaccharide, use, method or kit of claim 31, wherein the Burkholderia infection is an infection by Burkholderia mallei (Bm).
34. The tetrasaccharide, use, method or kit of any one of claims 15-22, 28 and 30, wherein the disease is melioidosis or glander.
35. The tetrasaccharide, use, method or kit of claim 34, wherein the disease is melioidosis.
36. The tetrasaccharide, use, method or kit of claim 34, wherein the disease is glander.
37. The tetrasaccharide, use, or method of any one of claims 23-26, wherein the anti-Burkholderia antibodies are anti-Burkholderia pseudomallei (Bp) antibodies or anti-Burkholderia mallei (Bm) antibodies.
38. The tetrasaccharide, use, or method of claim 37, wherein the anti-Burkholderia antibodies are anti-Burkholderia pseudomallei (Bp) antibodies.
39. The tetrasaccharide, use, or method of claim 37, wherein the anti-Burkholderia antibodies are anti-Burkholderia mallei (Bm) antibodies.
40. A method for producing the tetrasaccharide of formula (I):
wherein R1, R2, and L are as defined above,
the method comprising the steps of:
41. The method of claim 40, wherein the precursor of saccharide B with an STol protecting group on the anomeric carbon is diol 17:
42. The method of claim 40 or 41, wherein the rhamnoside precursor of saccharides A and C with an STol protecting group on the anomeric carbon is alcohol 23:
43. The method of any one of claims 40 to 42, wherein the precursor of saccharide D is acceptor 16:
44. The method of any one of claims 40 to 43, comprising the steps of:
and
wherein, in all of the above formulas,
45. The method of claim 44, wherein the glycosylation in one or more, preferably all, of glycosylating steps i), k), and m) is N-lodosuccinimide (NIS)/silver triflate (AgOTf)-promoted glycosylation.
46. The method of claim 44 or 45, wherein the deprotecting step p) comprises hydrogenolysing tetrasaccharide 40 or 31, thereby reducing the azides into amines and cleaving the Bn and benzylidene groups, thus producing tetrasaccharide 8 or 9.
47. The method of claim 44 or 45, wherein the deprotecting step p) comprises reducing the azides of tetrasaccharide 40 or 31 into amines, preferably using Staudinger reaction, and then hydrogenolysing the Bn and benzylidene groups, thus producing tetrasaccharide 8 or 9.
In the appended drawings:
Turning now to the invention in more details, there is provided a tetrasaccharide of formula I:
wherein:
In some embodiments, R1 represents —H. In alternative embodiments, R1 represents an acetyl group.
In preferred embodiments, R2 represents —H.
In preferred embodiments, -L- represents a C2-C6 alkylene group, more preferably a C5 alkylene group.
Herein, an “alkylene group” is bivalent saturated aliphatic hydrocarbon radical of general formula —CnH2n— (also called alkanediyl).
Herein, a “polyethylene glycol repeat unit” is a bivalent radical of formula “—O—CH2—CH2—”.
There is also provided a method of synthesizing the above tetrasaccharide. This multi-step chemical synthesis of functional oligosaccharides is an interesting alternative to the isolation and purification of bacterial polysaccharides. It allows, among other things, access to oligosaccharides mimicking the functional epitope of native polysaccharides without the use of pathogenic bacteria.
The presence of acetyl groups in the tetrasaccharide of formula (I) posed a substantial challenge in the development of the synthetic route, which had to be designed so that their migration or cleavage would be avoided. Thus, the present method must provide for the appropriate introduction of both the O-acetyl and O-methyl groups. This was complicated by the fact that the glycosylation required to attach the different saccharides into the desired tetrasaccharide made the acetyl unavailable as temporary protecting group.
Furthermore, the tetrasaccharide of formula (I) contains 6-deoxy-L-talose motifs (see the first and third groups from the left in formula (I), labelled saccharides “A” and “C” below). However, 6-deoxy-L-talose derivatives are not commercially available and thus other starting material should be used. Rhamnose derivatives have been selected for this purpose. Since rhamnose is an epimer of 6-deoxy-L-talose, the synthesis must include an epimerization step during which the rhamnose motifs are inverted into 6-deoxy-L-talose motifs.
However, such epimerization is liable to prevent the glycosylation required to attach the different saccharides into the desired tetrasaccharide. As such, it is conventionally preferred to carry out the rhamnose inversion after the required glycosylations. However, as shown in Example 1 below this approach did not work here. Another approach was thus necessary.
An approach based on methylphenylthio (STol) chemistry and the use of an azidomethylbenzoyl (AZMB) protecting group was developed.
In embodiments, this method for producing the tetrasaccharide of formula (I):
wherein R1, R2, and L are as defined above,
comprises the steps of:
In embodiments, this method comprises the steps of:
m) glycosylating trisaccharide acceptor 28 with thiotaloside 34 or thiotaloside 35, under previously mentioned conditions, thereby producing tetrasaccharide 36 or tetrasaccharide 37, respectively:
and
wherein, in all of the above formulas,
In embodiments, acceptor 16 can be provided by the method described in Tamigney Kenfack, M. et al. Deciphering minimal antigenic epitopes associated with Burkholderia pseudomallei and Burkholderia mallei lipopolysaccharide O-antigens. Nature communications 8, 115, doi:10.1038/s41467-017-00173-8 (2017).
In embodiments, diol 17 and alcohol 23 can be provided by the method described in Ellervik, U., Grundberg, H. & Magnusson, G. Synthesis of lactam and acetamido analogues of sialyl Lewis X tetrasaccharide and Lewis X trisaccharide. The Journal of organic chemistry 63, 9323-9338 (1998).
In embodiments, the glycosylation in one or more, preferably all, of glycosylating steps i), k), and m) is N-lodosuccinimide (NIS)/silver triflate (AgOTf)-promoted glycosylation.
In embodiments, deprotecting step p) comprises hydrogenolysing tetrasaccharide 40 or 31, thereby reducing the azides into amines and cleaving the Bn and benzylidene groups, thus producing tetrasaccharide 8 or 9.
In alternative embodiments, deprotecting step p) comprises reducing the azides of tetrasaccharide 40 or 31 into amines, preferably using Staudinger reaction, and then hydrogenolysing the Bn and benzylidene groups, thus producing tetrasaccharide 8 or 9.
In another aspect, the present disclosure provides a conjugate (or conjugate vaccine) comprising the tetrasaccharide of formula I described herein, and a molecule attached to the tetrasaccharide. The molecule may be any molecule useful to confer certain properties to the tetrasaccharide, such as a vaccine carrier molecule (protein carrier) that may be useful to increase the immunogenicity of the tetrasaccharide, or a detectable label that may be useful for detecting of anti-Burkholderia antibodies.
In embodiments, the conjugate (or conjugate vaccine) comprises the tetrasaccharide of formula I described herein and a vaccine carrier molecule, such as a protein carrier, attached to the tetrasaccharide. The term “protein carrier” as used herein refers to a protein that increases the immunogenicity of an antigen, particularly a weak antigen such as a polysaccharide. Such proteins are well known in the art, and include for example a genetically modified cross-reacting material (CRM) of diphtheria toxin (e.g., CRM197), tetanus toxoid (TT), meningococcal outer membrane protein complex (OMPC), diphtheria toxoid (DT), and H. influenzae protein D (HiD) (see, e.g., Michael E Pichichero, Hum Vaccin Immunother. 2013 Dec 1; 9(12): 2505-2523).
In preferred conjugates, the tetrasaccharide of formula I is attached to the abovementioned molecule/carrier protein via its amine group. Therefore, preferred conjugates include a conjugate of formula II:
wherein R1, R2, and L are as defined above.
In another aspect, the present disclosure provides a composition comprising the tetrasaccharide of formula I or conjugate described herein. In an embodiment, the composition further comprises the tetrasaccharide of formula I or conjugate and an excipient, in a further embodiment a pharmaceutically acceptable excipient.
Such compositions may be prepared in a manner well known in the pharmaceutical art by mixing the tetrasaccharide or conjugate having a suitable degree of purity with one or more optional pharmaceutically acceptable excipients (see Remington: The Science and Practice of Pharmacy, by Loyd V Allen, Jr, 2012, 22nd edition, Pharmaceutical Press; Handbook of Pharmaceutical Excipients, by Rowe et al., 2012, 7th edition, Pharmaceutical Press). The excipient can be suitable for administration of the tetrasaccharide or conjugate by any conventional administration route, for example, for oral, intravenous, parenteral, subcutaneous, intramuscular, intracranial, intraorbital, ophthalmic, intraventricular, intracapsular, intraspinal, intrathecal, epidural, intracisternal, intraperitoneal, intranasal or pulmonary (e.g., aerosol) administration. In an embodiment, the excipient is adapted for administration of the tetrasaccharide or conjugate by the intravenous or subcutaneous route. In an embodiment, the excipient is adapted for administration of the tetrasaccharide or conjugate by the intravenous route. In another embodiment, the excipient is adapted for administration of the tetrasaccharide or conjugate by the subcutaneous route.
An “excipient” as used herein has its normal meaning in the art and is any ingredient that is not an active ingredient (drug) itself. Excipients include for example binders, lubricants, diluents, fillers, thickening agents, disintegrants, plasticizers, coatings, barrier layer formulations, lubricants, stabilizing agent, release-delaying agents and other components. “Pharmaceutically acceptable excipient” as used herein refers to any excipient that does not interfere with effectiveness of the biological activity of the active ingredients and that is not toxic to the subject, i.e., is a type of excipient and/or is for use in an amount which is not toxic to the subject. Excipients are well known in the art, and the present composition is not limited in these respects. In certain embodiments, the composition described herein include excipients, including for example and without limitation, one or more binders (binding agents), thickening agents, surfactants, diluents, release-delaying agents, colorants, flavoring agents, fillers, disintegrants/dissolution promoting agents, lubricants, plasticizers, silica flow conditioners, glidants, anti-caking agents, anti-tacking agents, stabilizing agents, anti-static agents, swelling agents and any combinations thereof. As those of skill would recognize, a single excipient can fulfill more than two functions at once, e.g., can act as both a binding agent and a thickening agent. As those of skill will also recognize, these terms are not necessarily mutually exclusive. Examples of commonly used excipient include water, saline, phosphate buffered saline, dextrose, glycerol, ethanol, and the like, as well as combinations thereof. In many cases, it will be preferable to include isotonic agents, for example, sugars, polyalcohols, such as mannitol, sorbitol, or sodium chloride in the composition. Additional examples of pharmaceutically acceptable substances are wetting agents or auxiliary substances, such as emulsifying agents, preservatives, or buffers, which increase the shelf life or effectiveness.
In an embodiment, the composition is an immunogenic or vaccine composition. In an embodiment, the composition comprising the tetrasaccharide of formula I or conjugate described herein further comprises a vaccine adjuvant. The term “vaccine adjuvant” refers to a substance which, when added to an immunogenic agent such as an antigen (e.g., the tetrasaccharide or conjugate defined herein), non-specifically enhances or potentiates an immune response to the agent in the host upon exposure to the mixture. Suitable vaccine adjuvants are well known in the art and include, for example: (1) mineral salts (aluminum salts such as aluminum phosphate and aluminum hydroxide, calcium phosphate gels), squalene, (2) oil-based adjuvants such as oil emulsions and surfactant based formulations, e.g., incomplete or complete Freud's adjuvant, MF59 (microfluidised detergent stabilised oil-in-water emulsion), QS21 (purified saponin), AS02 [SBAS2] (oil-in-water emulsion+MPL+QS-21), (3) particulate adjuvants, e.g., virosomes (unilamellar liposomal vehicles incorporating influenza haemagglutinin), ASO4 ([SBAS4] aluminum salt with MPL), ISCOMS (structured complex of saponins and lipids), polylactide co-glycolide (PLG), (4) microbial derivatives (natural and synthetic), e.g., monophosphoryl lipid A (MPL), Detox (MPL+M. Phlei cell wall skeleton), AGP [RC-529] (synthetic acylated monosaccharide), DC_Chol (lipoidal immunostimulators able to self-organize into liposomes), OM-174 (lipid A derivative), CpG motifs (synthetic oligonucleotides containing immunostimulatory CpG motifs), modified LT and CT (genetically modified bacterial toxins to provide non-toxic adjuvant effects), complete Freud's adjuvant (comprising inactivated and dried mycobacteria) (5) endogenous human immunomodulators, e.g., hGM-CSF or hIL-12 (cytokines that can be administered either as protein or plasmid encoded), Immudaptin (C3d tandem array) and/or (6) inert vehicles, such as gold particles.
In another aspect, the present disclosure provides a method for preventing a disease caused by a Burkholderia infection in a subject, the method comprising administering to the subject an effective amount of the above tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein. In another aspect, the present disclosure provides the use of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for preventing a disease caused by a Burkholderia infection in a subject. In another aspect, the present disclosure provides the use of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for the manufacture of a medicament for preventing a disease caused by a Burkholderia infection in a subject. In another aspect, the present disclosure provides the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for preventing a disease caused by a Burkholderia infection in a subject.
The term “preventing” as used herein refers to the administration of the tetrasaccharide, conjugate or composition prior to the Burkholderia infection, or prior to the development of the disease (prophylactic administration), for preventing the development of the disease, delaying the development of the disease, and/or reducing the symptoms or severity of the disease.
In another aspect, the present disclosure provides a method for treating a disease caused by a Burkholderia infection in a subject, the method comprising administering to the subject an effective amount of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein. In another aspect, the present disclosure provides the use of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for treating a disease caused by a Burkholderia infection in a subject. In another aspect, the present disclosure provides the use of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for the manufacture of a medicament for treating a disease caused by a Burkholderia infection in a subject. In another aspect, the present disclosure provides the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for treating a disease caused by a Burkholderia infection in a subject.
In another aspect, the present disclosure provides a method for inducing the production of anti-Burkholderia antibodies in a subject, the method comprising administering to the subject an effective amount of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein. In another aspect, the present disclosure provides the use of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for inducing the production of anti-Burkholderia antibodies in a subject. In another aspect, the present disclosure provides the use of the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for the manufacture of a medicament for inducing the production of anti-Burkholderia antibodies in a subject. In another aspect, the present disclosure provides the tetrasaccharide of formula I, conjugate or composition (e.g., vaccine composition) described herein for inducing the production of anti-Burkholderia antibodies in a subject.
The term “treating” as used herein refers to the administration of the tetrasaccharide, conjugate or composition after the Burkholderia infection, or after the development of the disease (therapeutic administration), for reducing the symptoms or severity of the disease, preventing complications related to the disease, and/or reversing the pathology and/or symptomatology.
In an embodiment, the Burkholderia infection is an infection by Burkholderia pseudomallei (Bp) or Burkholderia mallei (Bm). In an embodiment, the disease is melioidosis or glanders.
Any suitable amount of the tetrasaccharide, conjugate or composition may be administered to a subject. The dosages will depend on many factors including the mode of administration. Typically, the amount of tetrasaccharide, conjugate or composition contained within a single dose will be an amount that effectively prevent the disease without inducing significant toxicity.
For the prevention or treatment of a given disease or condition, the appropriate dosage of the tetrasaccharide, conjugate or composition will depend on the type of disease or condition to be prevented/treated, previous therapy, the patient's clinical history and response to the tetrasaccharide, conjugate or composition, and the discretion of the attending physician. The tetrasaccharide, conjugate or composition is suitably administered to the subject at one time or over a series of treatments. Preferably, it is desirable to determine the dose-response curve in vitro, and then in useful animal models prior to testing in humans.
In another aspect, the present disclosure provides a method for diagnosing a Burkholderia infection in a subject, the method comprising contacting a sample from the subject with the tetrasaccharide of formula I described herein; and detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample, wherein the presence of complexes is indicative the subject suffers from a Burkholderia infection (and the absence of complexes is indicative the subject does not suffer from a Burkholderia infection).
In another aspect, the present disclosure provides a method for diagnosing a disease caused by a Burkholderia infection in a subject, the method comprising contacting a sample from the subject with the tetrasaccharide of formula I described herein; and detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample, wherein the presence of complexes is indicative the subject suffers from a disease caused by a Burkholderia infection (and the absence of complexes is indicative the subject does not suffer from a disease caused by a Burkholderia infection).
In another aspect, the present disclosure provides a method for detecting the presence or absence of antibodies specific for a Burkholderia bacterium in a sample from a subject, the method comprising contacting the sample with the tetrasaccharide of formula I described herein; and detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample.
Examples of methods to detect proteins (antibodies) in a sample include, but are not limited to: Western blot, immunoblot, enzyme-linked immunosorbent assay (ELISA), “sandwich” immunoassays, radioimmunoassay (RIA), immunoprecipitation, and surface plasmon resonance (SPR). In an embodiment, the presence or absence of antibodies in the sample is determined by ELISA.
In an embodiment, the tetrasaccharide of formula I is detectably labelled, i.e. comprises a detectable label attached thereto, to facilitate the detection of the tetrasaccharide/antibody complexes. As used herein, the term “detectable label” refers to a moiety emitting a signal (e.g., light) that may be detected using an appropriate detection system. Any suitable detectable label may be used in the method described herein. Detectable labels include, for example, enzyme or enzyme substrates (e.g., horseradish peroxidase (HRP), alkaline phosphatase (AP)), reactive groups, chromophores such as dyes or colored particles, luminescent moieties including bioluminescent, phosphorescent or chemiluminescent moieties, and fluorescent moieties.
In another embodiment, the detection of the tetrasaccharide/antibody complexes is performed using a detectably labelled secondary antibody, e.g., an antibody capable of binding to the antibodies from the sample bound to the tetrasaccharide, for example a detectably labelled anti-IgG antibody.
The sample used in the methods may be any sample susceptible to contain antibodies specific for a Burkholderia bacterium in a subject infected by the Burkholderia bacterium. In an embodiment, the sample is a blood sample or blood-derived sample, such as a plasma or serum sample. The sample may be a crude sample, or a sample subjected to one or more purification/enrichment steps. The sample may be a fresh sample, or a previously frozen sample.
In another aspect, the present disclosure provides a kit for (i) diagnosing a Burkholderia infection or a disease caused by a Burkholderia infection in a subject; or (ii) detecting the presence or absence of antibodies specific for a Burkholderia bacterium in a sample from a subject, the kit comprising the tetrasaccharide of formula I described herein. The kit may further comprise reagents for detecting the presence or absence of complexes between the tetrasaccharide and antibodies present in the sample, such as a secondary antibody, enzymatic substrates, buffers, etc.
As used herein, the term “subject” is taken to mean warm blooded animals such as mammals, for example, cats, dogs, mice, guinea pigs, horses, bovine cows, sheep and humans. In an embodiment, the subject is a mammal, and more particularly a human.
The use of the terms “a” and “an” and “the” and similar referents in the context of describing the invention (especially in the context of the following claims) are to be construed to cover both the singular and the plural, unless otherwise indicated herein or clearly contradicted by context.
The terms “comprising”, “having”, “including”, and “containing” are to be construed as open-ended terms (i.e., meaning “including, but not limited to”) unless otherwise noted.
Recitation of ranges of values herein are merely intended to serve as a shorthand method of referring individually to each separate value falling within the range, unless otherwise indicated herein, and each separate value is incorporated into the specification as if it were individually recited herein. All subsets of values within the ranges are also incorporated into the specification as if they were individually recited herein.
Similarly, herein a general chemical structure, such as Formula 1, with various substituents (R1, R2, etc.) and various radicals (e.g. alkyl) enumerated for these substituents is intended to serve as a shorthand method of referring individually to each and every molecule obtained by the combination of any of the radicals for any of the substituents. Each individual molecule is incorporated into the specification as if it were individually recited herein. Further, all subsets of molecules within the general chemical structures are also incorporated into the specification as if they were individually recited herein.
All methods described herein can be performed in any suitable order unless otherwise indicated herein or otherwise clearly contradicted by context.
The use of any and all examples, or exemplary language (e.g., “such as”) provided herein, is intended merely to better illuminate the invention and does not pose a limitation on the scope of the invention unless otherwise claimed.
No language in the specification should be construed as indicating any non-claimed element as essential to the practice of the invention.
Herein, the term “about” has its ordinary meaning. In embodiments, it may mean plus or minus 10% or plus or minus 5% of the numerical value qualified.
Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs.
Other objects, advantages and features of the present invention will become more apparent upon reading of the following non-restrictive description of specific embodiments thereof, given by way of example only with reference to the accompanying drawings.
The present invention is illustrated in further details by the following non-limiting examples.
We recently described the synthesis of seven di- and trisaccharides (1-7) mimicking all of the reported substitution patterns of Bp and Bm OAgs (
We now show that longer oligosaccharidic fragments, such as tetrasaccharides 8 and 9 (
The presence of acetyl groups in target tetrasaccharides 8 and 9 posed a substantial challenge in the development of the synthetic route, which had to be designed so that their migration or cleavage would be avoided. Retrosynthetic analysis of these oligosaccharides, as depicted in
As 6-deoxy-L-talose derivatives are not commercially available, rhamnosides 13 and 14 would be instead employed. We envisioned to conduct both C4 epimerization simultaneously at a later stage of the synthetic route via a two-step oxidation/reduction sequence. To reach Bp-like tetrasaccharide 8, we intended to take advantage of the steric hindrance surrounding the inner 6-deoxy-L-talose residue to acetylate regioselectivity the O-4 position of the non-reducing end residue. Finally, acceptor 16 would be equipped with an azidolinker at C1, which upon reduction would allow the coupling of the fully assembled, unprotected oligosaccharides to activated ELISA plates enabling antigenicity assays with serum samples and/or covalent coupling with carrier proteins.
As depicted in
Allyl rhamnoside 1927 was used as starting material for the preparation of TCA 13. Imidazole was used as catalyst for the selective protection of the C3 hydroxyl with a tert-butyldimethylsilyl (TBS) group and the remaining free OH was acetylated under standard conditions, yielding rhamnoside 20 in 92% yield over two steps. Allyl isomerization into the corresponding 1-propenyl ether was accomplished using an iridium-based catalyst36,37 and was followed by its hydrolysis using iodine38 in a mixture of THF and water. Resulting hemiacetal 21 was successfully converted into TCA 13 (˜9:1 α/β mixture) through a standard procedure involving trichloroacetonitrile and cesium carbonate. The latter was coupled with acceptor 16 under the promotion of trimethylsilyl trifluoromethanesulfonate (TMSOTf), providing disaccharide 22 in an excellent 91% yield as the sole α-anomer. In order to lengthen the disaccharide, deprotection of the TBS group was attempted using Et3N·3HF under microwave radiation, but acetyl cleavage was unfortunately observed. Tetra-n-butylammonium fluoride (TBAF)-mediated cleavage, with and without acetic acid buffer, also led to acetyl deprotection.
To circumvent this problem, thiorhamnoside 25 was prepared, bearing an orthogonal PMB group at O-3 instead of a TBS group (
Planning on employing a [2+2] glycosylation strategy (
As our previously envisioned methodology appeared ineffective, we chose to focus our attention on an alternative sequential [1+1+1+1] glycosylation pathway (
aDegradation of starting material.
bNo reaction.
We hypothesized that the simultaneous presence of two hydroxyl groups could lead to macromolecular interactions preventing the oxidation step to occur. Therefore, we envisioned that the introduction of a terminal 6-deoxy-talose residue would restrict these interactions and consequently enable the epimerization of the inner rhamnose unit. As depicted in
To prepare Bp and Bm LPS OAg-like tetrasaccharides, trisaccharide acceptor 28 was coupled with thiotaloside 34 and 35, respectively, under previously mentioned conditions, affording tetrasaccharides 36 and 37 exclusively as the α-anomers (
Two alternative pathways were studied for the global deprotection of tetrasaccharides 40 and 31 in order to reach target compounds 8 and 9, respectively. The first pathway (route A) consisted in the selective reduction of both azides followed by hydrogenolysis of the remaining benzyl and benzylidene groups, whereas the second route (route B) only involved the hydrogenolysis step. We therefore investigated a series of conditions for the selective reduction of both azides via the Staudinger reaction, which would result in the assisted cleavage of the AZMB group. We first planned to use trisaccharide 27 as a model compound, as we hypothesized that if difficulties had to arise during the AZMB deprotection, it would be due to the electrophilic acetyl group at the inner talose residue. Intramolecular rearrangement of iminophosphorane intermediates during the Staudinger reduction can indeed occur in compounds containing a neighbouring ester.43 Preliminary reduction tests were first conducted with trisaccharide 27, but we noticed that the reduction of the azidolinker reduction required harsher conditions than the AZMB group. Our hypothesis was that anchimeric assistance from the carbonyl moiety of the latter prior the hydrolysis step favoured its reduction. Our attention therefore shifted to disaccharide 26 and conditions were optimized for the sole reduction of the azidolinker (Table 2). Triphenylphosphine was first used in a mixture of THF/H2O in the presence of SiO2 (entry 1).31 After 20 h, the starting material was totally consumed but, as shown by TLC, the intermediates were not fully hydrolysed. Following work-up with aqueous NaHCO3 and purification, target amine 41 was isolated in low yield (21%). We then attempted to conduct the reaction through a two-step procedure, i.e., 1) formation of the iminophosphorane and 2) its hydrolysis, while heating the reaction mixture to 60° C., but a lower yield of amine 41 was obtained (entry 2). Switching the solvent for DMF and avoiding the work-up procedure allowed to improve the yield to 38% (entry 3). Satisfyingly, using the same reaction conditions than in entry 3 while avoiding the work-up provided amine 41 in excellent yield (88%, entry 4). Tris(4-methoxyphenyl)phosphine [P(PMP)3] was also tested without yield improvement (entry 5). The optimized reduction conditions were then applied to trisaccharide 27 bearing both the azidolinker and the AZMB group, yielding alcohol 42 in good yield (76%, entry 6). These conditions finally successfully furnished tetrasaccharide 43 from diol 31 (63%, entry 7), which was then deprotected into target compound 9 through a Pd-catalyzed hydrogenolysis, as shown in
Alternatively, reduction of the azides into the corresponding amines and cleavage of the permanent protecting groups were carried out via a one-step hydrogenolysis procedure, enabling the conversion of compound 40 into Bp-like tetrasaccharide 8. Noteworthy, the presence of the azidolinker required the addition of HCl (1.0 equiv) in the reaction mixture in order to protonate the amine formed upon its reduction, as primary amines are known to poison transition metal catalysts.44 Partial protonation of the 2-(aminomethyl)benzoyl group therefore also occurred prior to completion of the intramolecular cyclization, preventing the complete release of the corresponding hydroxyl group. The partial cleavage of the AZMB group not only diminished the isolated yield, but also complicated the purification of the target compound. First, exclusion size chromatography using LH-20 resin was employed to purify the tetrasaccharides from the isoindolinone, which was released following the AZMB cleavage. Then, reverse phase chromatography was required to isolate tetrasaccharide 8 from the derivative still bearing the protonated 2-(aminomethyl)benzoyl group. Despite this, direct hydrogenolysis of compound 40 still enabled the isolation of pure tetrasaccharide 8 in a moderate 60% yield, as shown in
aIsolated yield.
All starting materials and reagents were purchased from commercial sources and used as received without further purification. Air and water sensitive reactions were performed in oven-dried glassware under Ar atmosphere. Moisture sensitive reagents were introduced via a dry syringe. Anhydrous solvents were either prepared from commercial solvents and dried over heat-gun activated 4 Å molecular sieves or supplied over molecular sieves and used as received. Powdered 4 Å molecular sieves were activated before use by heating with a heat fun for ˜5 min under high vacuum. Reactions were monitored by thin-layer chromatography (TLC) with silica gel 60 F254 0.25 mm pre-coated aluminium foil plates. Compounds were visualized by using UV254 and/or orcinol (1 mg.mL−1) in 10% aq H2SO4 solution with heating. Normal-phase flash column chromatography was performed on silica gel 60 Å (15-40 μm). Reversed-phase flash column chromatography was performed on C18 silica gel (fully capped, 25-40 μm). Size exclusion chromatography was performed on GE Healthcare Sephadex LH-20 resin (70 μm). NMR spectra were recorded at 297 K in the indicated solvent (CDCl3, py-d5 or D2O) with a 600 MHz instrument, employing standard softwares given by the manufacturer. 1H and 13C NMR spectra were referenced to tetramethylsilane (TMS, δH=δC=0.00 ppm) as internal reference for spectra in CDCl3 and py-d5, or to internal acetone (δH=2.218 ppm; δC=30.9 ppm) for spectra in D2O. Assignments were based on 1H, 13C, COSY, HSQC and undecoupled HSQC experiments. Interchangeable assignments are marked with an asterisk. High-resolution mass spectra (HRMS) were recorded on an ESI-Q-TOF mass spectrometer. Optical rotations [α]20D were measured on an Anton Paar polarimeter.
para-Methylphenyl 2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-3-O-para-methoxybenzyl-1-thio-β-D-glucopyranoside (18)
Bu2SnO (1902 mg, 7.640 mmol, 1.1 equiv) was added to a solution of diol 17 (2411 mg, 6.946 mmol, 1.0 equiv) in toluene (83 mL). The mixture was refluxed with a Dean-Stark trap for 3 h, after which the solvents were evaporated under reduced pressure. The residue was solubilized in anhydrous DMF (83 mL) and CsF (1076 mg, 7.085 mmol, 1.02 equiv), TBAI (2617 mg, 7.085 mmol, 1.02 equiv), and PMBCI (1.13 mL, 8.34 mmol, 1.2 equiv) were successively added. The mixture was stirred at 90° C. for 16 h and the resulting suspension was cooled at 0° C. and filtered over Celite. The solution was co-evaporated with toluene and the residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 3:7) to give para-methylphenyl 4,6-O-benzylidene-3-O-para-methoxybenzyl-1-thio-δ-D-glucopyranoside (1738 mg, 51%, 82% brsm) as a white amorphous solid. DMAP (144 mg, 1.18 mmol, 1.0 equiv), DCC (486 mg, 2.36 mmol, 2.0 equiv), and AZMBOH (313 mg, 1.77 mmol, 1.5 equiv) were successively added to a solution of the previously prepared alcohol (582 mg, 1.18 mmol, 1.0 equiv) in anhydrous DCM (12 mL). The mixture was refluxed for 4 h under Ar and the resulting suspension was filtered over Celite. The solvent was concentrated under reduced pressure and the residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 2:8), furnishing glucoside 18 (751 mg, 98%) as a white amorphous solid: Rf 0.6 (Hex/EtOAc 7:3); [α]D20+36 (c 0.7, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.87-7.86 (m, 1H, CHAZMB), 7.61-7.59 (m, 1H, CHAr), 7.56-7.55 (m, 1H, CHAr), 7.50-7.49 (m, 2H, 2×CHAr), 7.41-7.37 (m, 4H, 4×CHAr), 7.35-7.33 (m, 2H, 2×CHsT01), 7.10-7.09 (m, 2H, 2×CHstol), 7.05-7.03 (m, 2H, 2×CHPMB), 6.60-6.59 (m, 2H, 2×CHPMB), 5.60 (s, 1H, H-7), 5.20 (dd, J=9.9 Hz, J=9.0 Hz, 1H, H-2), 4.81-4.72 (m, 4H, H-1, CH2AZMB, CHHPMB), 4.57 (d, 1H, J=11.6 Hz, CHHPMB), 4.41 (dd, J6a-J6b=10.5 Hz, J6a-5=5.0 Hz, 1H, H-6a), 3.87-3.82 (m, 2H, H-3 and H-6b), 3.77 (t, J=9.3 Hz, 1H, H-4), 3.69 (s, 3H, CH3PMB), 3.55 (td, J5-4=9.8 Hz, J5-6a=5.0 Hz, 1H, H-5), 2.33 (s, 3H, CH3STol); 13C NMR (150 MHz, CDCl3) δ (ppm) 165.0 (COORAZMB), 159.3 (CAr), 138.8 (CAr), 137.8 (CAr), 137.3 (CAr), 133.8 (20, 2×CHSTol), 133.0 (CHAr), 131.2 (CHAZMB), 130.0 (CAr), 129.9, 129.8 (4C, 2×CHSTol, 2×CHPMB), 129.5 (CHAr), 129.2 (CAr), 128.6 (CHAr), 128.4 (3C, 3×CHAr), 128.0 (CAr), 126.1 (2C, 2×CHAr), 113.7 (2C, 2×CHPMB), 101.4 (C-7), 87.1 (C-1), 81.7 (C-4), 79.2 (C-3), 74.1 (CH2PMB), 72.1 (C-2), 70.7 (C-5), 68.7 (0-6), 55.2 (CH3PMB), 53.0 (CH2AZMB), 21.3 (CH3STol); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C36H35N3NaO7S 676.2088; found 676.2067.
para-Methyl phenyl 2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-1-thio-β-D-glucopyranoside (15)
DDQ (378 mg, 1.66 mmol, 2.0 equiv) was added to a solution of glucoside 18 (544 mg, 0.832 mmol, 1.0 equiv) in DCM (18 mL) and H2O (1.7 mL) and the mixture was stirred at rt for 2 h. Saturated NaHCO3(aq) (20 mL) was added to quench the solution, which was then diluted in EtOAc (30 mL) and transferred in a separatory funnel. The organic layer was washed with saturated NaHCO3(aq) (30 mL) and brine (30 mL), dried over anhydrous MgSO4, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 90:10 to 85:15) to give alcohol 15 (343 mg, 77%) as a white amorphous solid: Rf 0.5 (Hex/EtOAc 7:3); [α]D20−26 (c 0.7, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 8.05-8.04 (m, 1H, CHAZMB), 7.60-7.58 (m, 1H, CHAr), 7.52-7.51 (m, 1H, CHAr), 7.49-7.47 (m, 2H, 2×CHAr), 7.46-7.43 (m, 1H, CHAr), 7.37-7.36 (m, 5H, 2×CHSTol, 3×CHAr), 7.12 (m, 2H, 2×CHSTol), 5.56 (s, 1H, H-7), 5.15 (dd, J2-1=9.9 Hz, J2-3=8.9 Hz, 1H, H-2), 4.85-4.76 (m, 3H, H-1, CH2AZMB), 4.41 (dd, J6a-6b=10.5 Hz, J6a-5=4.9 Hz, 1H, H-6a), 4.05 (t, J=9.0 Hz, 1H, H-3), 3.82 (t, J6b-6a=10.2 Hz, 1H, H-6b), 3.61 (t, J=9.3 Hz, 1H, H-4), 3.55 (td, J5-4=9.7 Hz, J5-6a=4.9 Hz, 1H, H-5), 2.35 (s, 3H, CH3s-rol); 13C NMR (150 MHz, CDCl3) δ (ppm) 166.0 (COORAZMB), 138.9 (CAr), 137.3 (CAr), 136.9 (CAr), 133.7 (20, 2×CHSTol), 133.1 (CHAr), 131.3 (CHAZMB), 130.0-126.4 (110, 2×CAr, 9×CHAr), 102.1 (C-7), 86.7 (C-1), 80.6 (C-4), 73.7 (C-3), 73.4 (C-2), 70.6 (C-5), 68.6 (C-6), 53.3 (CH2AZMB), 21.3 (CH3STol); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C28H27N3NaO6S 556.15128; found 556.15109; m/z [M+NH4]+calcd for C28H31N4O6S 551.19588; found 551.19581.
Allyl 2-O-acetyl-3-tert-butyldimethylsilyl-4-O-levulinoyl-α-L-rhamnopyranoside (20)
TBSCI (1989 mg, 13.23 mmol, 4.0 equiv), imidazole (674 mg, 9.92 mmol, 3.0 equiv), and DMAP (81 mg, 0.7 mmol, 0.2 equiv) were successively added to a solution of diol 1926 (1000 mg, 3.307 mmol, 1.0 equiv) in anhydrous THF (80 mL). The mixture was refluxed for 16 h under Ar. The suspension was filtered over Celite, rinsed, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc) to give allyl 3-tert-butyldimethylsilyl-4-O-levulinoyl-α-L-rhamnopyranoside (1375 mg, quantitative) as a yellow oil: Rf 0.4 (Hex/EtOAc 7:3); [α]D20−40 (c 1.1, CHCl3); 1H NMR (700 MHz, CDCl3) δ (ppm) 5.91 (dddd, J2-3A=17.2 Hz, J2-3B=10.4 Hz, J2-1A=6.1 Hz, J2-1B=5.1 Hz, 1H, H-2Allyl), 5.29 (ddd, J=17.2 Hz, 5.4 Hz, 1.6 Hz, 1H, H-3aAllyl), 5.21 (ddd, J=10.4 Hz, 4.8 Hz, 1.3 Hz, 1H, H-3bAllyl), 4.97 (t, J=9.6 Hz, 1H, H-4), 4.87 (d, J=1.4 Hz, 1H, H-1), 4.17 (ddt, J=13.1 Hz, 5.1 Hz, 1.5 Hz, 1H, H-1aAllyl), 4.04-3.97 (m, 2H, H-3, H-lbAllyl,), 3.83 (dd, J2-3=3.6 Hz, J2-1=1.5 Hz, 1H, H-2), 3.76 (dd, J5-4=9.8 Hz, J5-6=6.3 Hz, 1H, H-5), 2.89-2.81 (m, 1H, CHHLev), 2.74-2.66 (m, 1H, CHHLev), 2.64 (m, 1H, CHHLev), 2.54-2.47 (m, 1H, CHHLev), 2.20 (s, 3H, CH3Lev), 1.19 (d, J=6.3 Hz, 3H, H-6), 0.88 (s, 9H, C(CH3)3TBS), 0.11 (s, 3H, CH3TBS), 0.08 (s, 3H, CH3TBS); 13C NMR (176 MHz, CDCl3) δ (ppm) 206.5 (COLev), 172.1 (COORLev), 133.9 (C-2Allyl), 117.6 (C-3Allyl), 98.0 (C-1), 74.3 (C-4), 71.8 (C-2), 70.6 (C-3), 68.2 (C-1Ally,), 66.3 (C-5), 38.0 (CH2Lev), 30.0 (CH3Lev), 28.2 (CH2Lev), 25.7 (3C, C(CH3)3TBS), 18.0 (C(CH3)3TBS), 17.5 (C-6), 4.5 (CH3TBS), 4.6 (CH3TBS); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C20H36NaO7Si 439.21225; found 439.21102. The latter alcohol (1000 mg, 2.400 mmol, 1.0 equiv) was dissolved in anhydrous pyridine (40 mL), and Ac2O (40 mL) and DMAP (59 mg, 0.48 mmol, 0.2 equiv) were added. The mixture was stirred at rt for 16 h under Ar. The solution was diluted in toluene and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc) to give glycoside 20 (1013 mg, 92%) as a colorless oil: Rf 0.6 (Hex/EtOAc 7:3); [α]D20−23 (c 1.0, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 5.93-5.87 (m, 1H, H-2Allyl), 5.29 (ddd, J=17.1 Hz, 3.6 Hz, 1.5 Hz, 1H, H-3aAllyl), 5.22 (ddd, J=10.4 Hz, 3.2 Hz, 1.3 Hz, 1H, H-3bAllyl), 5.10 (dd, J2-3=3.6 Hz, J2-1=1.8 Hz, 1H, H-2), 4.98 (t, J=9.7 Hz, 1H, H-4), 4.73 (d, J=1.6 Hz, 1H, H-1), 4.16 (ddt, J=13.0 Hz, 5.2 Hz, 1.4 Hz, 1H, H-1aAllyl), 4.08 (dd, J3-4=9.5 Hz, J3-2=3.6 Hz, 1H, H-3), 3.99 (ddt, J=13.0 Hz, 6.1 Hz, 1.3 Hz, 1H, H-1bAllyl), 3.78 (dq, J5-4=9.9 Hz, J5-6=6.4 Hz, 1H, H-5), 2.88-2.82 (m, 1H, CHHLev), 2.70-2.62 (m, 2H, CHHLev, CHHLev), 2.52-2.47 (m, 1H, CHHLev), 2.20 (s, 3H, CH3Levl), 2.11 (s, 3H, CH3AC), 1.20 (d, J=6.3 Hz, 3H, H-6), 0.82 (s, 9H, C(CH3)3TBS), 0.07 (s, 3H, CH3TBS), 0.05 (s, 3H, CH3TBS); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.5 (COLev), 172.0 (COORLev), 170.5 (COORAc), 133.7 (C-2Allyl), 117.8 (C-3Allyl), 96.9 (C-1), 74.5 (C-4), 72.3 (C-2), 68.4, 68.3 (2C, C-1Allyl, C-3), 66.7 (C-5), 38.0 (CH2Lev), 30.0 (CH3Lev) 28.2 (CH2Lev), 25.6 (3C, C(CH3)3TBS), 21.1 (CH3Ac), 17.9, 17.6 (2C, C-6, C(CH3)3TBS), 4.7 (CH3TBS), 4.9 (CH3TBS); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C22H42NO8Si 476.26742; found 476.26647; m/z [M+Na]+ calcd for C22H38NaO8Si 481.22282; found 481.22179.
2-O-Acetyl-3-tert-butyldimethylsilyl-4-O-levulinoyl-α-L-rhamnopyranoside (21)
1,5-Cyclooctadiene-bis(methyldiphenylphosphine)-iridium(l) hexafluorophosphate (132 mg, 0.156 mmol, 0.05 equiv) was dissolved in anhydrous THF (15 mL) and the red solution was degassed under Ar. Hydrogen was bubbled through the solution for 5 min and the resulting yellow solution was once again degassed under argon. A solution of rhamnoside 20 (1435 mg, 3.129 mmol, 1.0 equiv) in anhydrous THF (15 mL) was added and the reaction mixture was stirred for 2 h at rt under Ar. Then, a solution of iodine (1588 mg, 6.258 mmol, 2.0 equiv) in THF/H2O (4:1, 18 mL) was added to the mixture, which was stirred for 1 h at rt. The excess of iodine was quenched by adding a freshly prepared 10% Na2S2O3(aq) solution and stirred until the color turned bright yellow. THF was evaporated under reduced pressure and the resulting aqueous phase was extracted using EtOAc (3×25 mL). The combined organic layers were washed with saturated NaHCO3(aq) (50 mL) and brine (50 mL). The organic phase was dried over anhydrous MgSO4 and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc) to give hemiacetal 21 (1100 mg, 84%, ratio α/β˜85:15) as a brown oil: Rf 0.6 (Tol/EtOAc 1:1); [α]D20−14 (c 1.1, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 5.11 (2×s, 2H, H-1, H-2), 4.98 (t, J=9.6 Hz, 1H, H-4), 4.14 (dd, J3-4=9.4 Hz, J3-2=3.0 Hz, 1H, H-3), 4.01 (dq, J5-4=9.7 Hz, J5-6=6.3 Hz, 1H, H-5), 3.14 (s, 1H, OH), 2.88-2.82 (m, 1H, CHHLev), 2.69-2.64 (m, 2H, CHHLe3v, CHHLev), 2.54-2.49 (m, 1H, CHHLev), 2.20 (s, 3H, CH3Lev), 2.12 (s, 3H, CH3Ac), 1.20 (d, J=6.3 Hz, 3H, H-6), 0.83 (s, 9H, (C(CH3)3TBS), 0.08 (s, 3H, CH3TBS), 0.06 (s, 3H, CH3TBS); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.7 (COLev), 172.1 (COORLev), 170.7 (COORAc), 92.4 (C-1), 74.5 (C-4), 72.6 (C-2), 67.9 (C-3), 66.9 (C-5), 38.0 (CH2Lev), 30.0 (CH3Lev), 28.2 (CH2Lev), 25.6 (3C, C(CH3)3TBS), 21.1 (CH3Ac), 17.9, 17.7 (2C, C-6, C(CH3)3TBS), −4.7 (CH3TBS), −4.9 (CH3TBS); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C19H38NO8Si 436.23612; found 436.2351; m/z [M+Na]+ calcd for C15H34NaO8Si 441.19152; found 441.19063.
2-O-Acetyl-3-tert-butyldimethylsilyl-4-O-levulinoyl-α-L-rhamnopyranosyl 2,2,2-trichloroacetimidate (13)
To a cool solution of hemiacetal 21 (383 mg, 0.915 mmol, 1.0 equiv) in acetone (2.3 mL) and DCM (11.5 mL) were added Cs2CO3 (59 mg, 0.18 mmol, 0.2 equiv) and CCl3CN (0.46 mL, 4.6 mmol, 5.0 equiv). The mixture was stirred for 1 h at rt, then the suspension was filtered over Celite and rinsed with DCM. The solvents were concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Tol/EtOAc+1% Et3N 95:5 to 9:1) to give trichloroacetimidate 13 (504 mg, 98%, α/β˜9:1) as a yellow oil: Rf 0.3 (Tol/EtOAc 9:1+1% Et3N); Rf 0.5 (Tol/AcOET 8:2+1% Et3N); 1H NMR (600 MHz, py-d5) δ (ppm) 6.71 (s, 1H, H-1), 5.75 (s, 1H, H-2), 5.58 (t, J=9.7 Hz, 1H, H-4), 4.60 (dd, J3-4=9.6 Hz, J3-2=3.5 Hz, 1H, H-3), 4.40 (dq, Jphd 5-3=12.2 Hz, J5-6=6.0 Hz, 1H, H-5), 2.96-2.73 (m, 4H, 2×CH2Lev), 2.08 (s, 3H, CH3Lev), 2.03 (s, 3H, CH3Ac), 1.48 (d, J=6.2 Hz, 3H, H-6), 0.96 (s, 9H, C(CH3)3TBS), 0.26 (s, 3H, CH3TBS), 0.24 (s, 3H, CH3TBS); 13C NMR (150 MHz, py-d5) δ (ppm) 206.7 (COLev), 172.9 (COORLev), 170.4 (COORAc), 159.3 (Cimine), 95.8 (C-1), 91.8 (CCl3), 74.3 (C-4), 71.5 (C-2), 70.7 (C-5), 69.5 (C-3), 38.4 (CH2Lev), 30.0 (CH3Lev), 29.1 (CH2Lev), 26.2 (3C, C(CH3)3TBS), 21.0 (CH3Ac), 18.6, 18.4 (C-6, C(CH3)3TBS), −4.3 (CH3TBS), −4.4 (CH3TBS); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C21H34NaO8Si 584.10115; found 584.10006.
(5-Azido-1-pentyl) 2-O-acetyl-3-tert-butyldimethylsilyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside 22)
To solution of trichloroacetimidate 13 (449 mg, 0.798 mmol, 1.5 equiv) in anhydrous Et2O (7 mL) cooled at −10° C. were successively added glucoside 16 (250 mg, 0.532 mmol, 1.0 equiv) and TMSOTf (1.9 μL, 11 μmol, 0.02 equiv). The mixture was stirred under Ar at −10° C. for 15 min after which the solution was quenched with Et3N (0.07 mL, 0.5 mmol, 1.0 equiv). The solvents were concentrated under reduced pressure and co-evaporated with toluene. The residue was purified by silica gel flash chromatography (Tol/EtOAc 95:5 to 80:20) to give disaccharide 22 (421 mg, 91%) as a white amorphous solid: Rf 0.7 (Tol/EtOAc 7:3); [α]D30−51 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.48-7.46 (m, 2H, 2×CHAr), 7.38-7.34 (m, 3H, 3×CHAr), 7.32-7.30 (m, 4H, 4×CHAr), 7.28-7.27 (m, 1H, CHAr), 5.56 (s, 1H, H-7A), 5.20 (dd, J2-3=3.6 Hz, J2-1=1.6 Hz, 1H, H-2B), 5.13 (d, J=1.3 Hz, 1H, H-1B), 4.87-4.84 (m, 2H, CHHBn, H-4B), 4.72 (d, J=10.8 Hz, 1H, CHHBn), 4.49 (d, J=7.8 Hz, 1H, H-1A), 4.36 (dd, J6a-6b=10.5 Hz, J6a-5=5.0 Hz, 1H, H6aA), 4.04 (dq, J5-4=12.5 Hz, J5-6=6.2 Hz, 1H, H-5B), 3.99 (dd, J3-4=9.5 Hz, J3-2=3.6 Hz, 1H, H-3B), 3.94-3.89 (m, 2H, H-1alinker, H-3A), 3.78 (t, J=10.3 Hz, 1H, H-6bA), 3.59-3.54 (m, 2H, H-1blinker, H-4A), 3.46 (dd, J=8.7 Hz, J=7.9 Hz, 1H, H-2A), 3.42 (dt, J=9.8 Hz, J=5.0 Hz, 1H, H-5A), 3.22 (t, J=6.9 Hz, 2H, H-5linker), 2.78-2.73 (m, 1H, CHHLev), 2.64-2.59 (m, 1H, CHHLev), 2.54-2.49 (m, 1H, CHHLev), 2.47-2.42 (m, 1H, CHHLev), 2.18 (s, 3H, CH3Lev), 2.04 (s, 3H, CH3Ac), 1.69-1.63 (m, 2H, H-2linker), 1.62-1.59 (m, 2H, H-4linker), 1.50-1.41 (m, 2H, H-3) 0.81 (s, 9H, C(CH3)3TBS), 0.78 (d, J=6.3 Hz, 3H, H-6B), 0.08 (s, 3H, CH3TBS), 0.04 (s, 3H, CH3TBS); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.3 (COLev), 171.9 (COORLev), 170.1 (COORA,), 138.0 (CAr), 137.3 (CAr), 129.3-126.3 (10C, 10×CHAr), 104.3 (C-1A), 101.8 (C-7A), 98.2 (C-1B), 82.6 (C-2A), 79.3 (C-4A), 76.2 (C-3A), 74.9 (CH2Bn), 74.5 (C-4B), 72.0 (C-2B), 70.2 (C-1linker), 69.0 (C-6A), 68.3 (C-3B), 66.43, 66.37 (2C, C-5A, C-5B), 51.4 (C-5linker), 37.9 (CH2Lev), 30.1 (CH3Lev), 29.5 (C-2linker), 28.8 (C-4linker), 28.2 (CH2Lev), 25.6 (3C, C(CH3)3TBS), 23.5 (C-3linker), 21.0 (CH3Ac), 17.9 (C(CH3)3TBS), 17.0 (C-6B), 4.6 (CH3TBS), 4.9 (CH3TBS); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C44H67N4O13Si 887.44684; found 887.44683; m/z [M+Na]+ calcd for C44H63NaO13Si 892.40224; found 892.4035.
para-Methylphenyl 4-O-levulinoyl-1-thio-α-L-rhamnopyranoside (24)
Levulinic acid (1.0 mL, 9.5 mmol, 1.15 equiv), DCC (1952 mg, 9.462 mmol, 1.15 equiv), and DMAP (101 mg, 0.823 mmol, 0.1 equiv) were added in a solution of alcohol 2338 (2554 mg, 8.228 mmol, 1 equiv) in anhydrous DCM (100 mL). The mixture was stirred under Ar at 50° C. for 2 h. The suspension was cooled to 0° C., filtered over Celite, and rinsed with cold DCM. The solvents were concentrated under reduced pressure and co-evaporated with toluene. The residue was purified by silica gel flash chromatography (Tol/EtOAc 8:2) to give para-methylphenyl 4-O-levulinoyl-2,3-O-isopropylidene-1-thio-α-L-rhamnopyranoside (3254 mg, 97%) as a white amorphous solid: Rf 0.5 (Tol/EtOAc 7:3); [α]D30−158 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.37-7.35 (m, 2H, 2×CHSTol), 7.14-7.12 (m, 2H, 2×CHSTol), 5.68 (s, 1H, H-1), 4.92 (dd, J=9.9 Hz, J=7.9 Hz, 1H, H-4), 4.35 (d, J=5.3 Hz, 1H, H-2), 4.24-4.18 (m, 2H, H-3, H-5), 2.90-2.85 (m, 1H, CHHLev), 2.72-2.69 (m, 1H, CHHLev), 2.68-2.66 (m, 1H, CHHLev), 2.61-2.56 (m, 1H, CHHLev), 2.33 (s, 3H, CH3STol), 2.19 (s, 3H, CH3Lev), 1.55 (s, 3H, CH3iso), 1.35 (s, 3H, CH3iso) 1.15 (d, J=6.3 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.5 (COLev), 172.1 (COORLev), 138.2 (CSTol), 132.6 (2C, 2×CHSTol), 130.0 (2C, 2×CHSTol), 129.4 (CSTol), 110.1 (Ciso), 84.1 (C-1), 76.6 (C-2), 75.6 (C-3), 75.1 (C-4), 65.6 (C-5), 38.0 (CH2Lev), 29.9 (CH3Lev), 28.1 (CH2Lev), 27.8 (CH3iso), 26.7 (CHsiso), 21.3 (CH3STol), 16.9 (C-6); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C21H32NO6S 426.1945; found 426.1957; m/z [M +Na]' calcd for C21H28NaO6S 431.1499; found 431.1512. The latter thiorhamnoside (3239 mg, 7.930 mmol, 1.0 equiv) was dissolved in 80% AcOH(aq) (99 mL) and the solution was stirred at 60° C. for 2 h. The solvents were concentrated under reduced pressure and co-evaporated with toluene. The residue was purified by silica gel flash chromatography (Hex/EtOAc 1:1 to 2:8) to give diol 24 (2615 mg, 90%) as a white amorphous solid: Rf0.5 (DCM/MeOH 95:5); [α]D20−230 (c 0.7, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.36-7.34 (m, 2H, 2×CHSTol), 7.13-7.11 (m, 2H, 2×CHSTol), 5.46 (d, J=0.6 Hz, 1H, H-1), 4.95 (t, J=9.6 Hz, 1H, H-4), 4.29 (dq, J5-4=9.8 Hz, J5-6=6.2 Hz, 1H, H-5), 4.22 (br s, 1H, H-2), 3.98-3.91 (m, 1H, H-3), 3.48 (d, J=4.4 Hz, 1H, OHC-3), 3.06 (br s, 1H, OHC-2), 2.88-2.79 (m, 2H, CH2Lev), 2.65-2.55 (m, 2H, CH2Lev), 2.33 (s, 3H, CH3STol), 2.20 (s, 3H, CH3Lev), 1.22 (d, J=6.3 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 207.7 (COLev), 175.6 (COORLev), 137.9 (CSTol), 132.1 (2C, 2×CHSTol), 130.2 (CSTol), 130.0 (2C, 2×CHSTol), 87.8 (C-1), 75.8 (C-4), 72.4 (C-2), 70.7 (C-3), 67.0 (C-5), 38.5 (CH2Lev), 29.9 (CH3Lev), 28.4 (CH2Lev), 21.3 (CH3STol), 17.4 (C-6); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C18H28NO6S 386.1632; found 386.1641; m/z [M+Na]+ calcd for C18H24NaO6S 391.1186; found 391.1197.
para-Methylphenyl 2-O-acetyl-4-O-levulinoyl-3-O-para-methoxybenzyl-1-thio-α-L-rhamnopyranoside (25)
Bu2SnO (1257 mg, 5.052 mmo, 1.1 equiv) was added to a solution of compound 24 (1692 mg, 4.592 mmol, 1.0 equiv) in toluene (55 mL) and the mixture was refluxed with a Dean-Stark trap for 2 h. The solution was cooled to rt and CsF (732 mg, 4.82 mmol, 1.05 equiv), TBAI (1781 mg, 4.822 mmol, 1.05 equiv), and PMBCI (0.74 mL, 5.5 mmol, 1.2 equiv) were successively added. The mixture was stirred under Ar at 40° C. for 16 h. The suspension was cooled at 0° C., filtered over Celite, and rinsed with DCM. The solvents were concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 1:1) to give para-methylphenyl 4-O-levulinoyl-3-O-para-methoxybenzyl-1-thio-α-L-rhamnopyranoside (1891 mg, 84%) as a yellow oil: Rf 0.6 (Hex/EtOAc 4:6); [α]D20−140 (c 1.2, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.33-7.32 (m, 2H, 2×CHSTol), 7.27-7.26 (m, 2H, 2×CHPMB), 7.12-7.10 (m, 2H, 2×CHSTol), 6.91-6.89 (m, 2H, 2×CHPMB), 5.46 (d, J=1.2 Hz, 1H, H-1), 5.08 (t, J=9.6 Hz, 1H, H-4), 4.59 (d, J=11.7 Hz, 1H, CHHPMB), 4.53 (d, J=11.8 Hz, 1H, CHHPMB), 4.22 (dq, J5-4=9.9 Hz, J5-6=6.2 Hz, 1H, H-5), 4.18 (dd, J2-3=3.0 Hz, J2-4=1.5 Hz, 1H, H-2), 3.81 (s, 3H, CH3PMB), 3.75 (dd, J3-4=9.4 Hz, J3-2=3.3 Hz, 1H, H-3), 2.77-2.71 (m, 2H, CH2Lev), 2.59-2.49 (m, 2H, CH2Lev), 2.32 (s, 3H, CH3STol), 2.19 (s, 3H, CH3Lev), 1.18 (d, J=6.3 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.5 (COLev), 172.1 (COORLev), 159.6 (CAr), 137.8 (CAr), 132.1 (2C, 2×CHSTol), 130.0, 129.7 (5C, CAr, 2×CHSTol, 2×CHPMB), 129.6 (CAr), 114.1 (2C, 2×CHPMB), 87.3 (C-1), 76.7 (C-3), 73.0 (C-4), 71.7 (CH2PMB), 69.9 (C-2), 67.6 (C-5), 55.4 (CH3PMB), 37.9 (CH2Lev), 30.0 (CH3Lev), 28.1 (CH2Lev), 21.2 (CH3STol), 17.4 (C-6); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C26H36NO7S 506.2207; found 506.22041; m/z [M+Na]+ calcd for C26H32NaO7S 511.1761; found 511.17561. The latter alcohol (1891 mg, 3.870 mmol, 1.0 equiv) was dissolved in anhydrous pyridine (19 mL) and Ac2O (19 mL), and DMAP (5 mg, 0.04 mmol, 0.01 equiv) was added. The solution was stirred under Ar at rt for 16 h, then the solvents were concentrated under reduced pressure and co-evaporated with toluene. The residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 7:3) to give compound 25 (1877 mg, 91%) as a white amorphous solid: Rf 0.6 (Hex/EtOAc 1:1); [α]D20−37 (c 1.1, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.33-7.32 (m, 2H, 2×CHSTol), 7.24-7.23 (m, 2H, 2×CHPMB), 7.12-7.11 (m, 2H, 2×CHSTol), 6.90-6.88 (m, 2H, 2×CHPMB), 5.56 (dd, J2-3=3.2 Hz, J2-1=1.6 Hz, 1H, H-2), 5.34 (d, J=1.4 Hz, 1H, H-1), 5.05 (t, J=9.8 Hz, 1H, H-4), 4.58 (d, J=11.9 Hz, 1H, CHHPMB), 4.38 (d, J=11.9 Hz, 1H, CHHPMB), 4.24 (dq, J5-4=9.9 Hz, J5-6=6.2 Hz, 1H, H-5), 3.81 (s, 3H, CH3PMB), 3.77 (dd, J3-4=9.7 Hz, J3-2=3.2 Hz, 1H, H-3), 2.80-2.75 (m, 1H, CHHLev), 2.70-2.65 (m, 1H, CHHLev), 2.60-2.55 (m, 1H, CHHLev), 2.52-2.47 (m, 1H, CHHLev), 2.33 (s, 3H, CH3STol), 2.18 (s, 3H, CH3Lev), 2.12 (s, 3H, CH3Ac), 1.21 (d, J=6.3 Hz, 1H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.5 (COLev), 172.1 (COORLev), 170.4 (COORAc), 159.5 (CAr), 138.2 (CAr), 132.4 (2C, 2×CHSTol), 130.1, 129.8 (5C, CAr, 2×CHSTd, 2×CHPMB), 129.7 (CAr), 113.9 (2C, 2×CHPMB), 86.6 (C-1), 74.2 (C-3), 72.9 (C-4), 71.1 (CH2PMB), 70.2 (C-2), 68.0 (C- 5), 55.4 (CH3PMB), 38.0 (CH2Lev), 30.0 (CH3Lev), 28.1 (CH2Lev), 21.3 (CH3), 21.2 (CH3), 17.5 (C-6); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C28H38NO8S 548.23216; found 548.23176; m/z [M+Na]+ calcd for C28H34NaO8S 553.18666; found 553.1874.
(5-Azido-1-pentyl) 2-O-acetyl-4-O-levulinoyl-3-para-methoxybenzyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (26)
Alcohol 16 (702 mg, 1.50 mmol, 1.0 equiv), donor 25 (952 mg, 1.79 mmol, 1.2 equiv), and NIS (505 mg, 2.24 mmol, 1.5 equiv) were dried together under high vacuum for 1 h. 4 Å activated ground molecular sieves (2808 mg) and anhydrous DCM (30 mL) were successively added and the mixture was stirred under Ar for 1 h. The reaction flask was cooled at −10° C. and protected from light using aluminum foil. AgOTf (38 mg, 0.15 mmol, 0.1 equiv) was added and the mixture was stirred under Ar for 1 h while being gradually warmed to 0° C. Et3N (0.21 mL, 1.5 mmol, 1.0 equiv) was added, the yellow suspension was filtered over Celite, and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 8:2 to 6:4) to give disaccharide 26 (1177 mg, 90%) as a white amorphous solid: Rf 0.6 (Hex/EtOAc 1:1); [α]D20−31 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.45-7.43 (m, 2H, 2×CHAr), 7.35-7.28 (m, 8H, 8×CHAr), 7.19 (m, 2H, 2×CHPMB), 6.84 (m, 2H, 2×CHPMB), 5.52 (s, 1H, H-7A), 5.43 (dd, J2-3=3.2 Hz, J2-1=1.6 Hz, 1H, H-2B), 5.17 (d, J=1.0 Hz, 1H, H-1B), 4.90-4.85 (m, 2H, H-4B, CHHPh), 4.69 (d, J=10.8 Hz, 1H, CHHPh), 4.58 (d, J=11.5 Hz, 1H, CHHPh), 4.50 (d, J=7.8 Hz, 1H, H-1A), 4.35 (dd, J6a-6b=10.5 Hz, J6a-5=5.0 Hz, 1H, H-6aA), 4.33 (d, J=11.6 Hz, 1H, CHHPh), 4.06 (m, 1H, H-5B), 3.96-3.92 (m, 1H, H-1alinker), 3.90 (t, J=9.2 Hz, 1H, H-3A), 3.79-3.75 (m, 5H, H-3B, H-6bA, CH3PMB), 3.59-3.56 (m, 1H, H-1blinker), 3.53 (t, J=9.5 Hz, 1H, H-4A), 3.46 (t, J=8.1 Hz, 1H, H-2A), 3.44-3.39 (m, 1H, H-5A), 3.23 (t, J=6.9 Hz, 2H, H-5linker), 2.71-2.66 (m, 1H, CHHLev), 2.62-2.57 (m, 1H, CHHLev), 2.48-2.43 (m, 1H, CHHLev), 2.42-2.38 (m, 1H, CHHLev), 2.15 (s, 3H, CH3lev), 2.05 (s, 3H, CH3Ac), 1.70-1.65 (m, 2H, H-2linker), 1.64-1.59 (m, 2H, H-4linker), 1.50-1.44 (m, 2H, H-3) 0.78 (d, J=6.2 Hz, 3H, H-6B); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.4 (COLev), 172.0 (COORLev), 170.2 (COORAc), 159.3 (CAr), 137.9 (CAr), 137.2 (CAr), 130.4 (CAr), 129.5-126.3 (12C, 12×CHAr), 113.8 (2C, 2×CHPMB), 104.3 (C-1A), 101.8 (C-7A), 98.4 (C-1B), 82.8 (C-2A), 79.3 (C-4A), 76.3 (C-3A), 75.0 (CH2Ph), 74.6 (C-3B), 72.9 (C4B), 71.1 (CH2Ph), 70.2 (C-1linker), 68.9 (C-6A), 68.5 (C-2B), 66.5 (2C, C-5A, C-5B), 55.4 (CH3PMB), 51.4 (C-5linker), 37.9 (CH2Lev), 30.0 (CH3Lev), 29.5 (C-2linker), 28.8 (C-4linker), 28.1 (CH2Lev), 23.5 (C-3) 21.1 (CH3Ac), 17.0 (C-3Lev), 6B); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C46H57N3NaO14 898.3733; found 898.3756; m/z [M+NH4]+ calcd for C46H61 N4O14 893.4179; found 893.4196.
(5-Azido-1-pentyl) 2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (12)
DDQ (609 mg, 2.68 mmol, 2.0 equiv) was added to a solution of disaccharide 26 (1175 mg, 1.342 mmol, 1.0 equiv) in DCM (27 mL) and H2O (2.7 mL), and the mixture was stirred at rt for 2 h. Saturated NaHCO3(aq) (40 mL) was added to quench the solution, which was then diluted in EtOAc (30 mL) and transferred in a separatory funnel. The organic layer was washed with saturated NaHCO3(aq) (40 mL) and brine (40 mL), dried over anhydrous MgSO4, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 1:1) to give alcohol 12 (878 mg, 87%) as a white amorphous solid: Rf 0.3 (Hex/EtOAc 4:6); [α]D20−43 (c 0.7, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.47-7.46 (m, 2H, 2×CHAr), 7.35-7.34 (m, 3H, 3×CHAr), 7.32-7.31 (m, 4H, 4'CHAr), 7.28-7.27 (m, 1H, CHAr), 5.52 (s, 1H, H-7A), 5.22-5.19 (m, 2H, H-1B, H-2B), 4.87 (d, J=10.8 Hz, 1H, CHHBn), 4.79-4.73 (m, 2H, H-4B, CHHBn), 4.49 (d, J=7.8 Hz, 1H, H-1A), 4.35 (dd, J6a-6b=10.5 Hz, J6a-5=5.0 Hz, 1H,
H-6aA), 4.13 (dq, J5-4=10.1 Hz, J5-6=6.2 Hz, 1H, H-5B), 4.04 (dd, J3-4=9.8 Hz, J3-2=3.2 Hz, 1H, H-3B), 3.95-3.90 (m, 2H, H-3A, H-1linker) 3.77 (t J6a-6b=10.3 Hz, 1H, H-6bA), 3.57-3.53 (m, 2H, H-4A, H-1blinker), 3.47-3.40 (m, 2H, H-2A, H-5A), 3.22 (t, J=6.9 Hz, 2H, H-5linker), 2.77-2.69 (m, 2H, CH2Lev), 2.51-2.49 (m, 2H, CH2Lev), 2.16 (s, 3H, CH3Lev), 2.07 (s, 3H, CH3Ac), 1.68-1.63 (m, 2H, H-2linker), 1.62-1.58 (m, 2H, H-4linker), 1.48-1.41 (m, 2H, H-3) 0.82 (d, J=6.2 Hz, 3H, H-6B); 13C NMR (150 MHz, CDCl3) δ (ppm) 207.0 (COLev), 173.2 (COORLev), 170.5 (COORAc), 138.1 (CAr), 137.3 (CAr), 129.2 (CHAr), 128.4 (2C, 2×CHAr), 128.3 (2C, 2×CHAr), 128.3 (2C, 2×CHAr), 127.9 (CHAr), 126.4 (2C, 2×CHAr), 104.3 (C-1A), 101.8 (C-7A), 97.8 (C-1B), 82.9 (C-2A), 79.3 (C-4A), 76.1 (C-3A), 75.2, 75.0 (2C, C-4B, CH2Bn), 72.3 (C-2B), 70.2 (C-1linker), 68.9 (C-6A), 68.6 (C-3B), 66.4 (C-5A), 65.8 (C-5B), 51.4 (C-5 linker), 38.2 (CH2Lev), 29.9 (CH3Lev), 29.4 (C-2linker), 28.7 (C-4linker), 28.2 (CH2Lev), 23.5 (C-3linker), 21.1 (CH3Ac), 16.9 (C-6B); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C38H43N3NaO13 778.3158; found 778.3159; m/z [M+K]+ calcd for C38H43KN3O13 794.2897; found 794.292.
(5-Azido-1-pentyl) 2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-3-O-para-methoxybenzyl-β-D-glucopyranosyl-(1→3)-2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (27)
Disaccharide 12 (583 mg, 0.772 mmol, 1.0 equiv), thioglucoside 18 (757 mg, 1.16 mmol, 1.5 equiv), and NIS (260 mg, 1.16 mmol, 1.5 equiv) were dried together under high vacuum for 1 h. 4 Å activated ground molecular sieves (2333 mg) and anhydrous DCM (15 mL) were successively added and the mixture was stirred under Ar for 1 h. The reaction flask was cooled at −10° C. and protected from light using aluminum foil. AgOTf (20 mg, 0.077 mmol, 0.1 equiv) was added and the mixture was stirred under Ar for 2 h while being gradually warmed to 0° C. Et3N (0.11 mL, 0.77 mmol, 1.0 equiv) was added, the yellow suspension was filtered over Celite, and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 8:2 to 7:3) to give trisaccharide 27 (872 mg, 88%) as a white solid foam: Rf 0.7 (Hex/EtOAc 6:4); [α]D20−28 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.70 (m, 1H, CHAZMB), 7.56 (m, 1H, CHAr), 7.51 (m, 2H, 2×CHAr), 7.41-7.25 (m, 15H, 15×CHAr), 7.07 (m, 2H, 2×CHPMB), 6.62 (m, 2H, 2×CHPMB), 5.60 (s, 1H, H-7C), 5.51 (s, 1H, H-7A), 5.35 (dd, J2-3=3.4 Hz, J2- 1=1.5 Hz, 1H, H-2B), 5.19 (s, 1H, H-1B), 5.15-5.11 (m, 1H, H-2C), 4.89 (t, J=10.0 Hz, 1H, H-4B), 4.86 (d, J=10.7 Hz, 1H, CHHBn), 4.78-4.75 (m, 2H, CHHBn, CHHPMB), 4.73-4.70 (m, 2H, CHHAZMB, H-1C), 4.63 (d, J=15.1 Hz, 1H, CHHAZMB), 4.59 (d, J=11.7 Hz, 1H, CHHPMB), 4.49 (d, J=7.8 Hz, 1H, H-1A), 4.37 (dd, J6a-6b10.5 Hz, J6a-5=5.0 Hz, 1H, H-6aC), 4.34 (dd, J6b-6a=10.5 Hz, J6b-5=4.9 Hz, 1H, H-6aA), 4.06 (m, 1H, H-5B), 4.02 (dd, J3-4=9.8 Hz, J3-2=3.5 Hz, 1H, H-3B), 3.93-3.90 (m, 2H, H-3A, H-1a,) 3.83-3.81 (m, 2H, H-3C, H-4C), 3.80-3.75 (m, 2H, H-6bA, H-6bC), 3.70 (s, 3H, CH3PMB), 3.58-3.53 (m, 2H, H-1linker, H-4A), 3.51-3.46 (m, 2H, H-2A, H-5C), 3.42-3.38 (m, 1H, H-5A), 3.21 (t, J=6.9 Hz, 2H, H-5) 2.27 (m, 1H, CHHLev), 2.13-2.09 (m, 1H, CHHLev), 2.07 (s, 3H, CH3Ac), 2.04-2.02 (m, 1H, CHHLev), 2.01 (s, 3H, CH3Lev), 1.80 (m, 1H, CHHLev), 1.67-1.63 (m, 2H, H-21inker), 1.66-1.57 (m, 2H, H-4linker), 1.49-1.41 (m, 2H, H-3linker), 0.75 (d, J=6.2 Hz, 3H, H-6B); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.1 (COLev), 171.4 (COORLev), 170.0 (COORAc), 164.7 (COORAZMB), 159.2 (CAr), 138.2 (CAr), 138.0 (CAr), 137.3 (CAr), 137.1 (CAr), 132.7 (CHAZMB), 130.7 (CHAr), 130.1 (CAr), 129.7 (2C, 2×CHPMB), 129.2 (CHAr), 129.1-126.1 (17C, CAr, 16×CHAr), 113.6 (2C, 2×CHPMB), 104.2 (C-1A), 101.7 (C-7A), 101.3 (C-7C), 101.1 (C-1C), 97.8 (C-1B), 82.7 (C-2A), 81.6 (C-4C), 79.2 (C-4A), 77.6 (C-3C), 76.0 (C-3A), 74.9 (2C, C-3B, CH2Bn), 73.6, 73.5 (2C, C-2C, CH2PMB), 72.5 (C-4B), 71.0 (C-2B), 70.2 (C-1linker) 68.9, 68.7 (2C, C-6A, C-6C), 66.3, 66.17, 66.15 (3C, C-5A, C-5B, C-5C), 55.2 (CH3PMB), 52.9 (CH2AZMB), 51.3 (C-5linker), 37.5 (CH2Lev), 29.7 (CH3Lev), 29.4 (C-2linker), 28.7 (C-4linker), 27.4 (CH2Lev), 23.5 (C-3linker), 21.0 (CH3Ac), 16.7 (C-6B); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C67H80N7O20 1302.5453; found 1302.5453; m/z [M+Na]+ calcd for C67H76N6NaO20 1307.5007; found 1307.5003.
(5-Azido-1-pentyl) 2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (28)
Trisaccharide 27 (99 mg, 0.077 mmol, 1.0 equiv) was dissolved in DCM (1.6 mL) and H2O (0.2 mL) and DDQ (35 mg, 0.16 mmol, 2.0 equiv) was added. The mixture was stirred at rt for 2 h, then quenched with saturated NaHCO3(aq) (2 mL). The solution was transferred into a separatory funnel, DCM (10 mL) was added, and the organic and aqueous layers were separated. The aqueous phase was extracted with DCM (2×10 mL). The combined organic phases were washed with saturated NaHCO3(aq) (20 mL) and brine (20 mL), dried over anhydrous MgSO4, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 8:2 to 4:6) to give alcohol 28 (68 mg, 75%) as a white solid foam: Rf 0.6 (Hex/EtOAc 1:1); [α]D20−62 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.89 (m, 1H, CHAZMB), 7.55 (m, 1H, CHAr), 7.51-7.49 (m, 3H, 3×CHAr), 7.44 (m, 2H, 2×CHAr), 7.39-7.28 (m, 12H, 12×CHAr), 5.54 (s, 1H, H-7C), 5.53 (s, 1H, H-7A), 5.36 (d, J=1.9 Hz, 1H, H-2B), 5.20 (s, 1H, H-1B), 5.10-5.07 (m, 1H, H-2C), 4.92 (t, J=9.9 Hz, 1H, H-4B), 4.86 (d, J=10.7 Hz, 1H, CHHBn), 4.78-4.73 (m, 3H, H-1C, CHHBn, CHHAZMB), 4.69 (d, J=14.7 Hz, 1H, CHHAZMB), 4.48 (d, J=7.7 Hz, 1H, H-1A), 4.37-4.33 (m, 2H, H-6aA, H-6aC), 4.11-4.07 (m, 1H, H-5B), 4.05 (dd, J3-4=9.8 Hz, J3-2=3.5 Hz, 1H, H-3B), 3.99 (t, J=9.0 Hz, 1H, H-3C), 3.94-3.89 (m, 2H, H-1alinker, H-3A), 3.78-3.75 (m, 2H, H-6bA, H-6bC), 3.62 (t, J=9.3 Hz, 1H, H-4C), 3.58-3.53 (m, 2H, H-1blinker, H-4A), 3.51-3.46 (m, 2H, H-2A, H-5C), 3.40 (td, J5-4=9.7 Hz, J5-6=5.0 Hz, 1H, H-5A), 3.21 (t, J=6.9 Hz, 2H, H-5) 2.87 (br s, 1H, OH), 2.28-2.22 (m, 1H, CHHLev), 2.17-2.12 (m, 1H, CHHLev), 2.09 (s, 3H, CH3Ac), 2.07-2.03 (m, 1H, CHHLev), 2.01 (s, 3H, CH3Lev), 1.86 (m, 1H, CHHLev), 1.67-1.62 (m, 2H, H-2linker), 1.62-1.57 (m, 2H, H-4linker), 1.48-1.41 (m, 2H, H-3linker), 0.78 (d, J=6.2 Hz, 3H, H-6B); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.2 (COLev), 171.5 (COORLev), 170.0 (COORAc), 165.6 (COORAZMB), 138.0 (CAr), 137.5 (CAr), 137.1 (CAr), 137.0 (CAr), 132.7-126.2 (20C, CAr, 19×CHAr), 104.2 (C-1A), 101.9, 101.7 (2C, C-7A, C-7C), 101.0 (C-1C), 97.7 (C-1B), 82.6 (C-2A), 80.7 (C-4C), 79.2 (C-4A), 76.1 (C-3A), 75.0, 74.9, 74.8 (3C, CH2Bn, C-3B, C-2C), 72.7 (C-4B), 72.2 (C-3C), 71.1 (C-2B), 70.2 (C-1linker), 68.9, 68.6 (2C, C-6A, C-6C), 66.3, 66.2 (3C, C-5A, C-5B, C-5C), 53.0 (CH2AZMB), 51.3 (C-5linker), 37.4 (CH2Lev), 29.7 (CH3Lev), 29.4 (C-2linker), 28.7 (C-4linker), 27.5 (CH2Lev), 23.4 (C-3linker), 21.0 (CH3Ac), 16.8 (C-6B); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C59H68N6NaO19 1187.4431; found 1187.4412.
para-Methylphenyl 2-O-acetyl-4-O-levulinoyl-3-O-methyl-1-thio-α-L-rhamnopyranoside (29)
Bu2SnO (1557 mg, 6.254 mmol, 1.1 equiv) was added to a solution of diol 24 (2095 mg, 5.686 mmol, 1.0 equiv) in toluene (23 mL) and the mixture was refluxed with a Dean-Stark trap for 5 h. The solution was cooled to rt, and CsF (881 mg, 5.80 mmol, 1.02 equiv) and Mel (17.7 mL, 284 mmol, 50.0 equiv) were successively added. The mixture was stirred under Ar at 80° C. for 16 h. The suspension was cooled at 0° C., filtered over Celite, and rinsed with DCM. The solvents were concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 1:1) to give para-methylphenyl 4-O-levulinoyl-3-O-methyl-1-thio-α-L-rhamnopyranoside (2019 mg, 93%, ˜83:17 mixture with its inseparable 2-O-methyl anomer) as a colorless oil: Rf 0.3 (Hex/EtOAc 4:6); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.36-7.35 (m, 2H, 2×CHSTol), 7.13-7.11 (m, 2H, 2×CHSTOl), 5.49 (d, J=1.4 Hz, 1H, H-1), 5.05 (t, J=9.5 Hz, 1H, H-4), 4.31 (dd, J2-3=3.2 Hz, J2-4=1.6 Hz, 1H, H-2), 4.29-4.24 (m, 1H, H-5), 3.53 (dd, J3- 4=9.4 Hz, J3-2=3.3 Hz, 1H, H-3), 3.45 (s, 3H, CH3OMe), 2.82-2.76 (m, 2H, CH2Lev), 2.63-2.59 (m, 2H, CH2Lev), 2.33 (s, 3H, CH3STol), 2.20 (s, 3H, CH3 Lev), 1.20 (d, J=6.3 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.6 (COLev), 172.2 (COORLev), 137.8 (CSTol), 132.1 (2C, 2×CHSTol), 130.02 (CSTol), 129.97 (2C, 2×CHSTol), 87.4 (C-1), 79.2 (C-3), 73.0 (C-4), 69.2 (C-2), 67.4 (C-5), 57.8 (CH3OMe), 38.0 (CH2Lev), 29.9 (CH 1, 28.1 (CH2Lev), 21.2 (CH3STol); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C19H30NO6S 400.1788; found 400.1806; m/z [M+Na]+ calcd for C19H26NaO6S 405.1342; found 405.1362. The latter alcohol (1678 mg, 4.387 mmol, 1.0 equiv) was dissolved in anhydrous pyridine (22 mL) and Ac2O (22 mL), and DMAP (5 mg, 0.04 mmol, 0.01 equiv) was added. The reaction mixture was stirred at rt for 16 h under Ar. The solution was concentrated under reduced pressure and co-evaporated with toluene (3×). The residue was purified by silica gel flash chromatography (Hex/EtOAc 5:5 to 4:6) to give thiorhamnoside 29 (1786 mg, 96%, 9:1 mixture with its inseparable 3-O-acetyl-2-O-methyl isomer) as a white amorphous solid: Rf 0.6 (Hex/EtOAc 4:6); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.36-7.35 (m, 2H, 2×CHSTol), 7.13-7.12 (m, 2H, 2×CHSTol), 5.57 (dd, J2-3=3.2 Hz, J2-1=1.6 Hz, 1H, H-2), 5.36 (d, J1-2=1.3 Hz, 1H, H-1), 5.04 (t, J=9.8 Hz, 1H, H-4), 4.30 (m, 1H, H-5), 3.59 (dd, J3- 4=9.8 Hz, J3-2=3.3 Hz, 1H, H-3), 3.37 (s, 3H, CH3OMe), 2.84-2.84 (m, 1H, CHHLev), 2.76-2.71 (m, 1H, CHHLev), 2.69-2.63 (m, 1H, CHHLev), 2.61-2.57 (m, 1H, CHHLev), 2.33 (s, 3H, CH3STol), 2.20 (s, 3H, CH3Lev), 2.11 (s, 3H, CH3Ac), 1.23 (d, J=6.3 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.5 (COLev), 172.2 (COORLev), 170.4 (COORAc), 138.2 (CStol), 132.4 (2C, 2×CHSTol), 130.1 (2C, 2×CHSTol), 129.9 (CSTol), 86.6 (C-1), 77.6 (C-3), 73.0 (C-4), 69.7 (C-2), 67.8 (C-5), 57.9 (CH3OMe), 38.0 (CH2Lev), 30.0 (CH3Lev), 28.1 (CH2Lev), 21.2 (CH3), 21.1 (CH3), 17.4 (C-6); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C21H32NO7S 442.1894; found 442.19005; m/z [M+Na]+ calcd for C21H28NaO7S 447.1448; found 447.1453.
(5-Azido-1-pentyl) 2-O-acetyl-4-O-levulinoyl-3-O-methyl-α-L-rhamnopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-3-D-glucopyranosyl-(1→3)-2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-3-D-glucopyranoside (10)
Trisaccharide 28 (300 mg, 0.257 mmol, 1.0 equiv), thiorhamnoside 29 (164 mg, 0.386 mmol, 1.5 equiv) and NIS (87 mg, 0.39 mmol, 1.5 equiv) were dried together under high vacuum for 1 h. 4 Å activated ground molecular sieves (1200 mg) and anhydrous DCM (5 mL) were successively added and the mixture was stirred under Ar for 1 h. The reaction flask was cooled at 10° C. and protected from light using aluminum foil. AgOTf (7 mg, 0.03 mmol, 0.1 equiv) was added and the mixture was stirred under Ar for 2 h while being gradually warmed to 0° C. Et3N (0.04 mL, 0.3 mmol, 1.0 equiv) was added, the yellow suspension was filtered over Celite, and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 6:4 to 5:5) to give tetrasaccharide 10 (291 mg, 77%) as a white amorphous solid: Rf 0.5 (Hex/EtOAc 4:6); [α]D20 62 (c 0.4, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.86 (m, 1H, CHAZMB), 7.59-7.55 (m, 2H, 2×CHAr), 7.48 (m, 2H, 2×CHAr), 7.43-7.42 (m, 2H, 2×CHAr), 7.38-7.29 (m, 12H, 12×CHAr), 5.57 (s, 1H, H-7C), 5.53 (s, 1H, H-7A), 5.36 (d, J=1.7 Hz, 1H, H-2B), 5.21-5.19 (m, 2H, H-1B, H-2C), 5.07 (d, J=1.1 Hz, H-2D), 4.91-4.87 (m, 2H, CHHBn, H-4B), 4.86-4.76 (m, 6H, CHHBn, H-1C, H-1D, CH2AZMB, H-4D), 4.49 (d, J=7.7 Hz, 1H, H-1A), 4.39 (dd, J6a-6b=10.5 Hz, J6a-6=4.9 Hz, 1H, H-6aC), 4.35 (dd, J6a-6b=10.2 Hz, J6a-5=4.9 Hz, 1H, H-6aA), 4.10-4.03 (m, 3H, H-3B, H-30, H-5B), 4.03-4.00 (m, 1H,
H-5D), 3.94-3.90 (m, 2H, H-1alinker, H-3A), 3.82-3.75 (m, 2H, H-6bA, H-6bC), 3.72 (t, J=9.4 Hz, 1H, H-4C), 3.59-3.52 (m, 3H, H-1blinker, H-4A, H-5C), 3.50-3.47 (m, 2H, H-2A, H-3D), 3.41 (td, J=9.6 Hz, J=4.9 Hz, 1H, H-5A), 3.24 (t, J=14.2 Hz, 2H, H-5linker), 3.21 (s, 3H, CH3OMe), 2.78-2.73 (m, 1H, CHHLev), 2.67-2.62 (m, 1H, CHHLev), 2.56-2.47 (m, 2H, CH2Lev), 2.32-2.29 (m, 1H, CHHLev), 2.16 (s, 3H, CH3Lev), 2.13-2.11 (m, 2H, CH2Lev), 2.08 (s, 3H, CH3Ac), 2.04 (s, 3H, CH3Lev), 1.87-1.80 (m, 4H, CH3Ac, CHHLev), 1.68-1.63 (m, 2H, H-2linker), 1.62-1.58 (m, 2H, H-4linker), 1.48-1.42 (m, 2H, H3linker), 0.77-0.76 (m, 6H, H-6B, H-6D); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.4 (COLev), 206.1 (COLev), 171.0 (COORLev), 171.4 (COORLev), 170.0 (COORAc), 169.5 (COORAc), 164.4 (COORAZMB), 139.2 (CAr), 138.0 (CAr), 137.1 (CAr), 137.0 (CAr), 133.1-126.2 (20C, CAr, 19×CHAr), 104.2 (C-1A), 101.8, 101.7 (2C, C-7A, C-7C), 100.9 (C-1C), 98.2 (C-1D), 97.7 (C-1B), 82.7 (C-2A), 79.2 (C-4A), 79.0 (C-4C), 76.7 (C-3D), 76.6 (C-3C), 76.1 (C-3A) 74.9, 74.7, 74.5 (3C, C-3B, CH2Bn, C-2C), 72.6 (2C, C-4B, C-4D), 71.0 (C-2B), 70.2 (C-1linker), 68.9, 68.7 (2C, C-6A, C-6C), 67.74 (C-2D), 66.71, 66.4, 66.3, 66.1 (4C, C-5A, C-5B, C-5C, C-5D), 57.6 (CH3OMe), 53.0 (CH2AZMB), 51.3 (C-5linker), 37.9 (CH2Lev), 37.4 (CH2Lev), 29.9 (CH3Lev), (CH3Lev), 29.7 29.4 (C-2linker), 28.7 (C-4linker), 28.0 (CH2Lev), 27.4 (CH2Lev), 23.4 (C-3linker), 21.0, 20.6 (2C, 2×CH3Ac), 16.8, 16.7 (2C, C-6B, C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C73H92N7O26 1482.6087; found 1482.6047; m/z [M+Na]+ calcd for C73H88N6NaO26 1487.564; found 1487.5617.
(5-Azido-1-pentyl) 2-O-acetyl-3-O-methyl-α-L-rhamnopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (30)
A solution of tetrasaccharide 10 (214 mg, 0.146 mmol, 1.0 equiv) in anhydrous pyridine (1 mL) was cooled at 0° C. Acetic acid (0.6 mL) and hydrazine monohydrate (0.07 mL, 1 mmol, 10.0 equiv) were successively slowly added. The mixture was stirred for 16 h under Ar while gradually being warmed to rt. The solution was concentrated under reduced pressure and co-evaporated with toluene (3×). The residue was purified by silica gel flash chromatography (Tol/EtOAc 9:1 to 7:3) to give diol 30 (160 mg, 86%) as a white amorphous solid: Rf 0.5 (Tol/EtOAc 1:1); [α]D20−40 (c 1.0, AcOEt); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.97-7.95 (m, 1H, CHAZMB), 7.55-7.52 (m, 1H, CHAr), 7.50-7.47 (m, 3H, 3×CHAr), 7.40-7.39 (m, 2H, 2×CHAr), 7.36-7.31 (m, 8H, 8×CHAr), 7.29-7.27 (m, 2H, 2×CHAr), 7.25-7.23 (m, 2H, 2×CHAr), 5.55 (s, 1H, H-7A), 5.49 (s, 1H, H-7C), 5.32 (dd, J2-3=3.5 Hz, J2-1=1.6 Hz, 1H, H-2B), 5.30-5.27 (m, 1H, H-2C), 5.14 (d, J=1.2 Hz, 1H, H-1B), 5.08 (dd, J2-3=3.2 Hz, J2-1=1.7 Hz, 1H, H-2D), 4.92-4.74 (m, 6H, CH2AZMB, CH2Bn, H-1D, H-1C), 4.48 (d, J=7.8 Hz, 1H, H-1A), 4.37 (dd, J6a-6b=10.6 Hz, J6a-5=4.9 Hz, 1H, H-6aC), 4.33 (dd, J6a-6b=10.4 Hz, J6a-5=4.9 Hz, 1H, H-6aA), 4.07 (t, J=9.0 Hz, 1H, H-3C), 3.97-3.89 (m, 4H, H-1alinker), H-5B, H-5D, H-3A), 3.87 (dd, J3-4=9.4 Hz, J3-2=3.6 Hz, 1H, H-3B), 3.77-3.69 (m, 3H, H-6bA, H-6bC, H-4C), 3.57-3.51 (m, 3H, H-1blinker, H-5C, H-4A), 3.48-3.44 (m, 2H, H-2A, H-4B), 3.40-3.38 (m, 2H, H-3D, H-5A), 3.35-3.31 (m, 1H, H-4D), 3.29 (s, 3H, CH3OMe), 3.20 (t, J=6.9 Hz, 2H, H-5) 2.41 (s, 1H, OH), 2.25 (s, 1H, OH), 2.04 (s, 3H, CH3Ac), 1.80 (s, 3H, CH3Ac), 1.66-1.61 (m, 2H, H-2linker), 1.61-1.56 (m, 2H, H-4linker), 1.47-1.40 (m, 2H, H-3linker), 0.90 (d, J=6.2 Hz, 3H, H-6B*), 0.86 (d, J=6.2 Hz, 3H, H-6D*); 13C NMR (150 MHz, CDCl3) δ (ppm) 169.9 (COORAc), 169.6 (COORAc), 165.2 (COORAZMB), 138.6 (CAr), 138.2 (CAr), 137.1 (CAr), 137.0 (CAr), 133.3-126.2 (20C, CA, 19×CHAr), 104.2 (C-1A), 101.8, 101.5 (2C, C-7A, C-7C), 101.4 (C-1C), 98.5 (C-1D), 98.1 (C-B), 82.8 (C-2A), 79.3, 79.2 (2C, C-4A, C-3D), 78.2 (2C, C-3B, C-4C), 76.6, 76.5 (2C, C-3A, C-3C), 75.1, 74.9 (2C, CH2Bn, C-2C), 71.7, 71.5 (2C, C-4B, C-4D), 70.7 (C-2B), 70.2 (C-1linker), 68.8, 68.6 (2C, C-6A, C-6C), 68.5, 67.8 (2C, C-5B, C-5D), 67.3 (C-2D), 66.5 (C-5C), 66.3 (C-5A), 57.3 (CH3OMe), 53.3 (CH2AZMB), 51.3 (C-1linker), 29.4 (C-2linker), 28.7 (C-4linker), 23.4 (C-3) 21.0 (CH3Ac), 20.6 (CH3Ac), 17.14, 17.07 (2C, C-6B, C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C63H80N7O22 1286.5351; found 1286.5342; m/z [M+Na]+ calcd for C63H76N6NaO22 1291.4905; found 1291.4892.
para-Methylphenyl 2-O-acetyl-3-O-methyl-1-thio-α-L-rhamnopyranoside (32)
A solution of thiorhamnoside 29 (876 mg, 2.06 mmol, 1.0 equiv) in anhydrous pyridine (13 mL) was cooled at 0° C. Acetic acid (8.5 mL) and hydrazine monohydrate (0.5 mL, 10 mmol, 5.0 equiv) were successively slowly added. The mixture was stirred for 16 h under Ar while gradually being warmed to rt. The solution was concentrated under reduced pressure and co-evaporated with toluene (3×). The residue was purified by silical gel flash chromatography (Hex/EtOAc 7:3 to 6:4) to give alcohol 32 (616 mg, 91%, 83:17 mixture with its inseparable 3-O-acetyl-2-O-methyl isomer) as a colorless oil: Rf 0.5 (Hex/EtOAc 4:6); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.36-7.35 (m, 2H, 2×CHSTol), 7.13-7.12 (m, 2H, 2×CHSTol), 5.56 (dd, J2-3=3.1 Hz, J2-1=1.5 Hz, 1H, H-2), 5.35 (d, J=1.2 Hz, 1H, H-1), 4.23-4.18 (m, 1H, H-5), 3.58 (td, J4-3,4-5=9.4 Hz, J4-CH=2.0 Hz, 1H, H-4), 3.47 (dd, J3-4=9.4 Hz, J3-2=3.1 Hz, 1H, H-3), 3.43 (s, 3H, CH3OMe), 2.50 (d, J=2.2 Hz, 1H, OH), 2.33 (s, 3H, CH3STol), 2.11 (s, 3H, CH3Ac), 1.36 (d, J=6.2 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 170.3 (COORAc), 138.1 (CSTol), 132.4 (2C, 2×CHSTol), 130.1 (CSTol), 130.0 (2C, 2×CHSTol), 86.8 (C-1), 80.1 (C-3), 72.1 (C-4), 69.4, 69.3 (2C, C-2, C-5), 57.5 (CH3STol), 21.3 (CH3), 21.2 (CH3), 17.7 (C-6); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C16H22NaO5S 349.10802; found 349.1078.
para-Methylphenyl 2-O-acetyl-6-deoxy-3-O-methyl-1-thio-α-L-talopyranoside (33)
A solution of anhydrous DMSO (0.57 mL, 8.0 mmol, 5.0 equiv) in anhydrous DCM (16 mL) was cooled at −10° C. and PDCP (0.72 mL, 4.8 mmol, 3.0 equiv) and Et3N (1.11 mL, 7.98 mmol, 5.0 equiv) were successively added. A solution of alcohol 32 (521 mg, 1.60 mmol, 1.0 equiv) in anhydrous DCM (8 mL) was added dropwise during 1 h. The mixture was stirred at −10° C. for 10 min under Ar, and for an additional 30 min while gradually being warmed to rt. ater (50 mL) was added to the solution, which was then transferred to a separatory funnel. The organic and aqueous layers were separated, and the aqueous phase was extracted with DCM (3×30 mL). The combined organic layers were washed with brine (50 mL), then dried over anhydrous MgSO4, and concentrated under reduced pressure. The resulting ketone was solubilized in MeOH (16 mL) and cooled at −10° C. NaBH4 (109 mg, 2.87 mmol, 1.8 equiv) was slowly added and the mixture was stirred for 1 h while gradually being warmed to 0° C. The solution was diluted with DCM (50 mL), transferred in a separatory funnel, and washed with water (30 mL). The aqueous phase was extracted with DCM (3×30 mL), the combined organic phases were washed with brine (60 mL) and dried over anhydrous MgSO4. The solution was concentrated under reduced pressure and the residue was purified by silica gel flash chromatography (Tol/EtOAc 95:5 to 85:15) to give taloside 33 (371 mg, 71%, 2 steps) as a colorless oil: Rf 0.4 (Tol/EtOAc 1:1); [α]D20+268 (c 0.4, CHCl13); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.37-7.35 (m, 2H, 2×CHSTol), 7.14-7.12 (m, 2H, 2×CHSTol), 5.46 (m, 1H, H-2), 5.41 (brs, 1H, H-1), 4.42-4.38 (m, 1H, H-5), 3.83 (dd, J4-OH=9.1 Hz, J4-5,4-3=3.2 Hz, 1H, H-4), 3.55 (t, J=3.5 Hz, 1H, H-3), 3.46 (s, 3H, CH3OMe), 2.46 (d, J=9.3 Hz, 1H, OH), 2.33 (s, 3H, CH3STol), 2.14 (s, 3H, CH3Ac), 1.36 (d, J=6.5 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 169.6 (COORAc), 138.3 (CSTol), 132.5 (2C, 2×CHSTol), 130.1 (2C, 2×CHSTol), 129.8 (CSTol), 86.9 (C-1), 75.0 (C-3), 70.2 (C-2), 69.7 (C-4), 68.4 (C-5), 56.5 (CH3OMe), 21.3 (2C, 2×CH3), 16.5 (C-6); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C16H22NaO5S 349.10802; found 349.10839.
para-Methylphenyl 2,4-O-di-acetyl-6-deoxy-3-O-methyl-1-thio-α-L-talopyranoside (34)
Alcohol 33 (197 mg, 0.613 mmol, 1.0 equiv) was solubilized in EtOAc (6 mL) and Ac2O (0.58 mL, 6.1 mmol, 10.0 equiv) and DMAP (8 mg, 0.06 mmol, 0.1 equiv) were added. The mixture was refluxed for 3 h under Ar. The solvents were concentrated under reduced pressure and co-evaporated with toluene (3×). The residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 7:3) to give compound 34 (200 mg, 90%) as a white amorphous solid: Rf 0.6 (Hex/EtOAc 1:1); [π]D20−137 (c 0.7, CHCL3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.35-7.34 (m, 2H, 2×CHSTol), 7.13-7.11 (m, 2H, 2×CHSTol), 5.48 (s, 1H, H-1), 5.40 (d, J=3.7 Hz, 1H, H-2), 5.31 (d, J=3.4 Hz, 1H, H- 4), 4.52 (dq, J5-6=6.3 Hz, J5-4=0.8 Hz, 1H, H-5), 3.59 (t, J=3.6 Hz, 1H, H-3), 3.40 (s, 3H, CH3OMe), 2.33 (s, 3H, CH3STol), 2.16 (s, 3H, CH3Ac), 2.13 (s, 3H, CH3Ac), 1.21 (d, J=6.5 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 170.8 (COORAc), 170.4 (COORAc), 138.0 (CSTol), 132.0 (2C, 2×CHSTol), 130.0 (2C, 2×CHSTol), 129.8 (CSTol), 86.9 (C-1), 74.51 (C-3), 68.6, 68.5 (2C, C-2, C-4), 66.5 (C-5), 57.4 (CH3OMe), 21.3, 21.2 (2C, 2×CH3), 21.0 (CH3), 16.4 (C-6); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C18H24NaO6S 391.11858; found 391.11991.
para-Methylphenyl 2-O-acetyl-4-O-chloroacetyl-6-deoxy-3-O-methyl-1-thio-α-L-talopyranoside (35)
Chloroacetic anhydride (268 mg, 1.57 mmol, 5.0 equiv) and DMAP (4 mg, 0.03 mmol, 0.1 equiv) were added to a solution of alcohol 33 (102 mg, 0.313 mmol, 1.0 equiv) in EtOAc (3 mL). The mixture was refluxed for 1 h under Ar, then diluted with EtOAc (3 mL). The solution was poured into a separatory funnel, washed with saturated NaHCO3(aq) (3×5 mL) and brine (5 mL), and dried over anhydrous MgSO4. The solvents were concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 8:2 to 7:3) to give compound 35 (120 mg, 95%) as a yellow oil: Rf 0.4 (Hex/EtOAc 7:3); [α]D20−107 (c 1.0, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.35-7.33 (m, 2H, 2×CHSTol), 7.13-7.12 (m, 2H, 2×CHSTol), 5.48 (d, J=1.0 Hz, 1H, H-1), 5.41-5.38 (m, 1H, H-2), 5.37 (d, J=3.5 Hz, 1H, H-4), 4.56 (dq, J5-6=6.5 Hz, J5-4=1.1 Hz, 1H, H-5), 4.19 (d, J=14.9 Hz, 1H, CHHAcCl) 4.14 (d, J=14.9 Hz, 1H, CHHAcCl), 3.62 (t, J=3.6 Hz, 1H, H-3), 3.40 (s, 3H, CH3OMe), 2.33 (s, 3H, CH3STol), 2.13 (s, 3H, CH3Ac), 1.23 (d, J=6.5 Hz, 3H, H-6); 13C NMR (150 MHz, CDCl3) δ (ppm) 170.4 (COORAc), 167.3 (COORAcCl), 138.2 (CAr), 132.2 (2C, 2×CHSTol), 130.1 (2C, 2×CHSTol), 129.6 (CAr), 86.8 (C-1), 74.2 (C-3), 70.5 (C-4), 68.3 (C-2), 66.2 (C-5), 57.4 (CH3OMe), 40.9 (CH2AcCl), 21.3, 21.2 (2C, 2×CH3), 16.3 (C-6); HRMS (ESI-TOF) m/z [M+Na]+ calcd for C18H23ClNaO6S 425.07961; found 425.07992.
(5-Azido-1-pentyl) 2,4-O-di-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (36)
Trisaccharide 29 (101 mg, 0.0867 mmol, 1.0 equiv), thiotaloside 34 (47 mg, 0.13 mmol, 1.5 equiv) and NIS (29 mg, 0.13 mmol, 1.5 equiv) were dried together under high vacuum for 1 h. 4 Å activated ground molecular sieves (400 mg) and anhydrous DCM (1.7 mL) were successively added and the mixture was stirred under Ar for 1 h. The reaction flask was cooled to −10° C. and protected from light using aluminum foil. AgOTf (2 mg, 0.009 mmol, 0.1 equiv) was added and the mixture was stirred under Ar for 2 h while being gradually warmed to 0° C. Et3N (0.01 mL, 0.09 mmol, 1.0 equiv) was added, the yellow suspension was filtered over Celite, and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 8:2 to 5:5) to give tetrasaccharide 36 (106 mg, 87%) as a white amorphous solid: Rf0.5 (Hex/EtOAc 4:6); [α]D20−54 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.86-7.85 (m, 1H, CHAr), 7.61-7.59 (m, 1H, CHAr), 7.57-7.54 (m, 1H, CHAr), 7.45-7.41 (m, 4H, 4×CHAr), 7.36-7.33 (m, 7H, 7×CHAr), 7.32-7.27 (m, 5H, 5×CHAr), 5.53 (s, 1H, H-7C), 5.52 (s, 1H, H-7A), 5.35 (dd, J2-3=3.5 Hz, J2-4=1.6 Hz, 1H, H-2B), 5.21-5.19 (m, 2H, H-1B, H-2C), 5.02 (d, J=3.1 Hz, 1H, H- 2D), 4.96 (d, J=3.9 Hz, 1H, H-4D), 4.91-4.82 (m, 5H, CH2AZMB, CHHBn, H-4B, H-1D), 4.78-4.76 (m, 2H, CHHBn, H-1C), 4.49 (d, J=7.7 Hz, 1H, H-1A), 4.38 (dd, J6a-6b=10.7 Hz, J6a-6=5.0 Hz, 1H, H-6aC), 4.35 (dd, J6a-6b=11.1 Hz, J6a-5=5.6 Hz, 1H, H-6aA), 4.17 (q, J=6.5 Hz, 1H, H-5D), 4.10-4.04 (m, 3H, H-3B, H-3C, H-5B), 3.94-3.90 (m, 2H, H-1alinker, H-3A), 3.79-3.75 (m, 2H, H-6bA, H-6bC), 3.67 (t, J=9.4 Hz, 1H, H-4C), 3.59-3.52 (m, 3H, H-1blinker, H-5C, H-4A), 3.50-3.45 (m, 2H, H-2A, H-3D), 3.41 (td, J5-4=9.7 Hz, J5-6=5.0 Hz, H-5A), 3.24 (s, 3H, CH3OMe), 3.22 (t, J=6.9 Hz, 2H, H-5linker), 2.36-2.30 (m, 1H, CHHLev), 2.17-2.10 (m, 2H, CHHLev, CHHLev), 2.08 (s, 3H, CH3Ac), 2.05 (s, 3H, CH3 Lev), 2.04 (s, 3H, CH3Ac), 1.81-1.77 (m, 1H, CHHLev), 1.77 (s, 3H, CH3Ac), 1.67-1.64 (m, 2H, H-2linker) 1.60-1.59 (m, 2H, H-4linker), 1.49-1.41 (m, 2H, H-3linker), 0.76 (d, J=6.2 Hz, 3H, H-6B), 0.70 (d, J=6.5 Hz, 3H, H-6D); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.2 (COLev), 171.4 (COORLev), 170.8 (COORAc), 170.0 (COORAc), 169.5 (COORAc), 164.2 (COORAZMB), 138.7 (CAr), 138.0 (CAr), 137.14 (CAr), 137.07 (CAr), 133.1-126.2 (20C, CAr, 19×CHAr), 104.2 (C-1A), 102.1, 101.7 (2C, C-7A, C-7C), 100.9 (C-1C), 99.1 (C-1D), 97.8 (C-1B), 82.7 (C-2A), 79.3 (C-4A), 79.0 (C-4C), 76.2, 76.1 (2C, C-3A, C-3C), 75.0, 74.9 (2C, C-3B, CH2Bn), 74.6 (C-2C), 73.4 (C-3D), 72.6 (C-4B), 70.9 (C-2B), 70.3 (C-1linker), 68.9, 68.7, 68.5 (3C, C-6A, C-6C, C-2D), 66.5, 66.3, 66.2 (4C, C-5A, C-5B, C-5C, C-4D), 65.5 (C-5D), 57.2 (CH3OMe), 53.1 (CH2AZMB), 51.4 (C-5linker), 37.5 (CH2Lev), 29.8 (CH3Lev), 29.4 (C-2linker), 28.8 (C-4linker), 27.5 (CH2Lev), 23.5 (C-3linker), 21.1 (CH3Ac), 21/0 (CH3Ac), 20.8 (CH3Ac), 16.8 (C-6B), 15.8 (C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C70H88N7O25 1426.58244; found 1426.58819; m/z [M+Na]+ calcd for C70H84N6NaO25 1431.53873; found 1431.54367.
(5-Azido-1-pentyl) 2-O-acetyl-4-O-chloroacetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (37)
Trisaccharide 29 (109 mg, 0.0933 mmol, 1.0 equiv), thiotaloside 35 (56 mg, 0.14 mmol, 1.5 equiv), and NIS (32 mg, 0.14 mmol, 1.5 equiv) were dried together under high vacuum for 1 h. 4 Å activated ground molecular sieves (435 mg) and anhydrous DCM (1.9 mL) were successively added and the mixture was stirred under Ar for 1 h. The reaction flask was cooled to −10° C. and protected from light using aluminum foil. AgOTf (2 mg, 0.009 mmol, 0.1 equiv) was added and the mixture was stirred under Ar for 2 h while being gradually warmed to 0° C. Et3N (0.01 mL, 0.09 mmol, 1.0 equiv) was added, the yellow suspension was filtered over Celite, and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 8:2 to 5:5) to give tetrasaccharide 37 (110 mg, 82%) as a white amorphous solid: Rf 0.4 (Tol/EtOAc 7:3); [α]D20−68 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.86 (m, 1H, CHAZMB), 7.61-7.59 (m, 1H, CHAr), 7.57-7.55 (m, 1H, CHAr), 7.45-7.44 (m, 2H, 2×CHAr), 7.42-7.41 (m, 2H, 2×CHAr), 7.37-7.33 (m, 7H, 7×CHAr), 7.31-7.28 (m, 5H, 5×CHAr), 5.53 (s, 1H, H-7C), 5.52 (s, 1H, H-7A), 5.35 (dd, J2-3=3.5 Hz, J2-1=1.7 Hz, 1H, H-2B), 5.21-5.18 (m, 2H, H-1B, H-2C), 5.07 (d, J=3.3 Hz, 1H, H-2D), 4.94 (d, J=3.9 Hz, 1H, H-4D), 4.90-4.81 (m, 5H, CH2AZMB, CHHBn, H-1D, H-4B), 4.78-4.76 (m, 2H, CHHBn, H-1C), 4.49 (d, J=7.7 Hz, 1H, H-1A), 4.38 (dd, J6a-6b=10.6 Hz, J6a-5=4.9 Hz, 1H, H-6aC), 4.35 (dd, J6a-6b=10.4 Hz, J6a-5=4.9 Hz, 1H, H-6aA), 4.22-4.18 (m, 1H, H-5D), 4.10-4.00 (m, 5H, CH2AcCl, H-3B, H-5B, H-3C), 3.94-3.90 (m, 2H, H-1alinker, H-3A), 3.77 (td, J=10.3 Hz, J=4.9 Hz, 2H, H-6bA, H-6bC), 3.67 (t, J=9.4 Hz, 1H, H-4C), 3.59-3.52 (m, 3H, H-1blinker, H-5C, H-4A), 3.49-3.47 (m, 2H, H-2A, H-3D), 3.41 (td, J5-4=9.8 Hz, J5-6=5.0 Hz, 1H, H-5A), 3.24 (s, 3H, CH3OMe), 3.22 (t, J=6.9 Hz, 2H, H-5) 2.36-2.30 (m, 1H, CHHLev), 2.14-2.07 (m, 2H, CHHLev, CHHLev), 2.07 (s, 3H, CH3Ac), 2.05 (s, 3H, CH3Lev), 1.82-1.80 (m, 1H, CHHLev), 1.77 (s, 3H, CH3Ac), 1.69-1.63 (m, 2H, H-2linker), 1.61-1.60 (m, 2H, H-4linker), 1.48-1.42 (m, 2H, H3linker), 0.76 (d, J=6.2 Hz, 3H, H-6B), 0.70 (d, J=6.5 Hz, 3H, H-6D); 13C NMR (150 MHz, CDCl3) δ (ppm) 206.2 (COLev), 171.4 (COORLev), 170.0 (COORAc), 169.4 (COORAc), 167.3 (COORAcCl), 164.2 (COORAZMB), 139.7 (CAr), 138.0 (CAr), 137.2 (2C, 2×CAr), 137.1-126.2 (20C, CAr, 19×CHAr), 104.3 (C-1A), 102.2, 101.7 (2C, C-7A, C-7C), 100.9 (C-1C), 99.0 (C-1D), 97.8 (C-1B), 82.7 (C-2A), 79.3 (C-4A), 79.0 (C-4C), 76.4, 76.1 (2C, C-3A, C-3C), 75.0, 74.9 (2C, C-3B, CH2Bn), 74.6 (C-2C), 73.1 (C-3D), 72.6 (C-4B), 71.0 (C-2B), 70.6 (C-2D), 70.3 (C-1linker), 68.9, 68.7 (2C, C-6A, C-6C), 66.5, 66.3, 66.2, 66.1 (4C, C-5A, C-5B, C-5C, C-4D), 65.2 (C-5D), 57.3 (CH3OMe), 53.1 (CH2AZMB), 51.4 (C-5linker), 40.9 (CH2AcCl), 37.5 (CH2Lev), 29.8 (CH3Lev), 29.5 (C-2linker), 28.8 (C-4linker), 27.5 (CH2Lev), 23.5 (C-3linker), 21.1 (CH3Ac), 20.8 (CH3Ac), 16.8 (C-6B), 15.7 (C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C70H87ClN7O25 1460.54347; found 146054641.
(5-Azido-1-pentyl) 2,4-O-di-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (38)
A solution of tetrasaccharide 36 (98 mg, 0.070 mmol, 1.0 equiv) in anhydrous pyridine (0.45 mL) was cooled at 0° C. Acetic acid (0.3 mL) and hydrazine monohydrate (0.02 mL, 0.4 mmol, 5.0 equiv) were successively slowly added. The mixture was stirred for 16 h under Ar while gradually being warmed to rt. The solution was concentrated under reduced pressure and co-evaporated with toluene (3×). The residue was purified by silica gel flash chromatography (Tol/EtOAc 9:1 to 7:3) to give alcohol 38 (78 mg, 85%) as a white amorphous solid: Rf 0.5 (Tol/EtOAc 6:4); [α]D20−59 (c 0.8, CHCl3); 1H NMR (600 MHz, CDCl3) α (ppm) 7.95 (m, 1H, CHAZMB), 7.55-7.50 (m, 2H, 2×CHAr), 7.45-7.43 (m, 2H, 2×CHAr), 7.39-7.27 (m, 12H, 12×CHAr), 7.24-7.22 (m, 2H, 2×CHAr), 5.52 (s, 1H, H-7C), 5.48 (s, 1H, H-7A), 5.31-5.27 (m, 2H, H-2B, H-2C), 5.14 (s, 1H, H-1B), 5.03 (d, J=3.1 Hz, 1H, H-2D), 4.98 (d, J=3.9 Hz, 1H, H-4D), 4.94 (d, J=14.9 Hz, 1H, CHHAZMB), 4.91 (s, 1H, H-1D), 4.87-4.82 (m, 2H, CHHBn, H-1C), 4.79-4.77 (m, 2H, CHHBn, CHHAZMB), 4.48 (d, J=7.7 Hz, 1H, H-1A), 4.36 (dd, J6a-6b=10.6 Hz, J6a-5=4.9 Hz, H-6aC), 4.34 (dd, J6a-6b=10.4 Hz, J6a-5=4.9 Hz, H-6aA), 4.18 (q, J=6.5 Hz, 1H, H-5D), 4.08 (t, J=9.2 Hz, 1H, H-3C), 3.96-3.89 (m, 3H, H-1alinker, H-5B, H-3A), 3.85 (dd, J3-4=9.4 Hz, J3-2=3.6 Hz, 1H, H-3B), 3.77-3.72 (m, 2H, H-6bA, H-6bC), 3.66 (t, J=9.4 Hz, 1H, H-4C), 3.56-3.52 (m, 2H, H-1blinker, H-4A), 3.52-3.50 (m, 1H, H-5C), 3.48-3.44 (m, 3H, H-3D, H-2A, H-4B), 3.41-3.37 (m, 1H, H-5A), 3.26 (s, 3H, CH3OMe), 3.20 (t, J=6.9 Hz, 2H, H-5linker), 2.05 (s, 3H, CH3Ac), 2.04 (s, 3H, CH3Ac), 1.76 (s, 3H, CH3Ac), 1.66-1.63 (m, 2H, H-2linker), 1.60-1.56 (m, 2H, H-4linker), 1.46-1.40 (m, 2H, H-3) 0.85 (d, J=6.2 Hz, 3H, H-6B), 0.72 (d, J=6.5 Hz, 3H, H-6D); 13C NMR (150 MHz, CDCl3) δ (ppm) 170.8 (COORAc), 169.9 (COORAc), 169.6 (COORAc), 165.0 (COORAZMB), 139.0 (CAr), 138.2 (CAr), 137.1 (2C, 2×CAr), 133.4-126.2 (20C, CAr, 19×CHAr), 104.2 (C-1A), 102.1 (C-7C), 101.5 (2C, C-7A, C-1C), 99.0 (C-1D), 98.1 (C-1B), 82.8 (C-2A), 79.3, 79.1, 78.9 (3C, C-4A, C-4C, C-3B), 76.5 (C-3A), 75.9 (C-3C), 75.1, 75.0 (2C, C-2C, CH2Bn), 73.4 (C-3D), 71.7 (C-4), 70.5 (C-2B), 70.2 (C-1linker), 68.9 (3C, C-6A, C-6C, C-2D), 67.8 (C-5B), 66.6, 66.4 (3C, C-4D, C-5A, C-5C), 65.5 (C-5D), 57.2 (CH3OMe), 53.4 (CH2AZMB), 51.4 (C-5linker), 29.4 (C-2linker), 28.7 (C-4linker), 23.5 (C-3linker), 21.1 (CH3Ac), 21.0 (CH3Ac), 20.8 (CH3Ac), 17.1 (C-6B), 15.8 (C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C65H82N7O23 1328.54566; found 1328.5449; m/z [M+Na]+ calcd for C65H78N6NaO23 1333.50105; found 1333.50103.
(5-Azido-1-pentyl) 2-O-acetyl-4-O-chloroacetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (39)
A solution of tetrasaccharide 37 (476 mg, 0.330 mmol, 1.0 equiv) in anhydrous pyridine (2 mL) was cooled at 0° C. Acetic acid (1.4 mL) and hydrazine monohydrate (0.08 mL, 2 mmol, 5.0 equiv) were successively slowly added. The mixture was stirred for 3 h under Ar while gradually being warmed to rt. The solution was concentrated under reduced pressure and co-evaporated with toluene (3×). The residue was purified by silica gel flash chromatography (Tol/EtOAc 9:1 to 7:3) to give alcohol 39 (290 mg, 65%) as a white amorphous solid: Rf 0.7 (Tol/EtOAc 7:3); [α]D20−52 (c 0.6, CHCl3); 1H NMR (600 MHz, CDCl3) α (ppm) 7.95-7.93 (m, 1H, CHAZMB), 7.55-7.51 (m, 2H, 2×CHAr), 7.45-7.43 (m, 2H, 2×CHAr), 7.39-7.27 (m, 12H, 12×CHAr), 7.24-7.22 (m, 2H, 2'CHAr), 5.52 (s, 1H, H-7C), 5.49 (s, 1H, H-7A), 5.31 (dd, J2-3=3.5 Hz, J2-1=1.6 Hz, 1H, H-2B), 5.28 (dd, J=8.8 Hz, J=7.8 Hz, 1H, H-2C), 5.14 (d, J=1.2 Hz, H-1B), 5.08 (s, 1H, H-2D), 4.97 (d, J=3.9 Hz, 1H, H-4D), 4.94 (d, J=14.9 Hz, 1H, CHHAZMB), 4.90 (s, 1H, H-1D), 4.86 (d, J=10.7 Hz, 1H, CHHBn), 4.83 (d, J=7.7 Hz, 1H, H-1C), 4.79-4.76 (m, 2H, CHHAZMB, CHHBn), 4.48 (d, J=7.7 Hz, 1H, H-1A), 4.36 (dd, J6a-6b=10.8 Hz, J6a-5=5.1 Hz, 1H, H-6aC), 4.34 (dd, H6a-6b=10.6 Hz, J6a-5=5.1 Hz, 1H, H-6aA), 4.20 (q, J=6.6 Hz, 1H, H-5D), 4.08-4.00 (m, 3H, CH2AcCl, H-3C), 3.95-3.84 (m, 3H, H-1alinker, H-5B, H-3A), 3.85 (dd,=9.4 Hz, 42=3.6 Hz, 1H, H-3B), 3.76 (d, J=10.4 Hz, 1H, H-6bA) 3.73 (d, J=10.5 Hz, 1H, H-6bC), 3.67 (t, J=9.4 Hz, 1H, H-4C), 3.56-3.50 (m, 4H, H-1blinker, H-3D, H-4A, H-5C), 3.48-3.41 (m, 2H, H-2A, H-4B), 3.39 (td, J=9.7 Hz, J=5.0 Hz, 1H, H-5A), 3.26 (s, 3H, CH3OMe), 3.20 (t, J=6.9 Hz, 2H, H-2linker), 2.08 (s, 1H, OH), 2.03 (s, 3H, CH3Ac), 1.76 (s, 3H, CH3Ac), 1.66-1.62 (m, 2H, H-2linker), 1.61-1.56 (m, 2H, H-4linker), 1.47-1.40 (m, 2H, H-3linker), 0.85 (d, J=6.2 Hz, 3H, H-6B), 0.72 (d, J=6.2 Hz, 3H, H-6D); 13C NMR (150 MHz, CDCl3) δ (ppm) 169.9 (COORAc), 169.5 (COORAc), 167.3 (COORAcCl), 165.0 (COORAZMB), 139.0 (CAr), 138.2 (CAr), 137.1 (CAr), 137.0 (CAr), 133.4-126.2 (20C, CAr, 19×CHAr), 104.2 (C-1A), 102.2, 101.59. 101.56 (3C, C-1C, C-7A, C-7C), 98.9 (C-1D), 98.1 (C-1B), 82.8 (C-2A), 79.4, 79.1, 78.9 (3C, C-4A, C-4C, C-3B), 76.5 (C-3A), 76.1 (C-3C), 75.1, 75.0 (2C, CH2Bn, C-2C), 73.1 (C-3D), 71.8 (C-4B), 70.6, 70.5 (2C, C-2B, C-2D), 70.2 (C-1linker), 68.9, 68.7 (2C, C-6A, C-6C), 67.8 (C-5B), 66.5 (C-5A), 66.4 (C-5C), 66.2 (C-4D), 65.2 (C-5D), 57.3 (CH3OMe), 53.4 (CH2AZMB), 51.4 (C-5linker), 40.9 (CH2AcCl), 29.4 (C-2linker), 28.8 (C-4linker), 23.5 (C-3linker), 21.1 (CH3Ac), 20.8 (CH3Ac), 17.1 (C-6B), 15.8 (C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C65H81 N7O23 1362.50669; found 1362.51071; m/z [M+Na]+ calcd for C65H77ClN6NaO23 1367.46208; found 1367.46835.
(5-Azido-1-pentyl) 2,4-O-di-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-6-deoxy-α-L-talopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (40)
Dess-Martin periodinane (10 mg, 0.023 mmol, 2.2 equiv) was added to a solution of alcohol 38 (14 mg, 0.011 mmol, 1.0 equiv) in anhydrous DCE (0.16 mL). The mixture was refluxed under Ar for 1 h, then cooled to rt. The solution was diluted with DCM (1 mL) and quenched with 10% Na2S2O3(aq) (1 mL). The solution was transferred into a separatory funnel and the organic and aqueous layers were separated. The organic phase was washed with brine (1 mL), dried over anhydrous MgSO4, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Hex/EtOAc 9:1 to 6:4) to give the corresponding ketone as a white solid. The latter was dissolved in anhydrous DCM/MeOH (0.2 mL, 1:3) and the solution was cooled at 10° C. NaBH4 (2 mg, 0.04 mmol, 4.0 equiv) was slowly added and the mixture was stirred under Ar for 1 h while gradually being warmed to 0° C. The solution was diluted with DCM (1 mL) and washed with water (1 mL). The aqueous layer was extracted with DCM (3×1 mL). The combined organic layers were washed with brine (4 mL), dried over anhydrous MgSO4, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Tol/EtOAc 9:1 to 7:3) to give alcohol 40 (7 mg, 52%) as a white amorphous solid: Rf 0.3 (Tol/EtOAc 7:3); [α]D20−96 (c 0.1, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 8.02-8.01 (m, 1H, CHAZMB), 7.58-7.54 (m, 2H, 2×CHAr), 7.47-7.44 (m, 4H, 4×CHAr), 7.39-7.36 (m, 6H, 6×CHAr), 7.33-7.30 (m, 5H, 5×CHAr), 7.28-7.26 (m, 1H, CHAr), 5.56 (s, 1H, H-7C), 5.52 (s, 1H, H-7A), 5.33 (dd, J2-3=8.9 Hz, J2-1=7.9 Hz, 1H, H-2C), 5.26-5.23 (m, 1H, H-2B), 5.22 (s, 1H, H-1B), 5.05 (d, J=3.1 Hz, 1H, H-2D), 5.01 (d, J=3.9 Hz, 1H, H-4D), 4.95 (d, J=7.7 Hz, 1H, H-1C), 4.91-4.87 (m, 4H, CH2AZMB, CHHBn, H-1D), 4.73 (d, J=10.8 Hz, 1H, CHHBn), 4.51 (d, J=7.8 Hz, 1H, H-1A), 4.38 (dd, J6a-6b=10.8 Hz, J6a-5=5.1 Hz, 1H, H-6aC), 4.35 (dd, J6a-6b=11.0 Hz, J6a-5=5.4 Hz, 1H, H-6aA), 4.20 (q, J=5.4 Hz, 1H, H-5D), 4.14-4.11 (m, 2H, H-5B, H-3C), 4.10 (t, J=3.6 Hz, 1H, H-3B), 3.96 (t, J=8.2 Hz, 1H, H-3A), 3.94-3.91 (m, 1H, H-1alinker), 3.82-3.77 (m, 2H, H-6bA, H-6bC), 3.71 (t, J=9.4 Hz, 1H, H-4C), 3.60-3.54 (m, 4H, H-1blinker, H-4A, H-4B, H-5C), 3.51 (t, J=3.7 Hz, 1H, H-3D), 3.47-3.41 (m, 2H, H-2A, H-5A), 3.30 (s, 3H, CH3OMe), 3.22 (t, J=6.9 Hz, 2H, H-5linker), 2.26 (d, J=9.7 Hz, 1H, OH), 2.07 (s, 3H, CH3Ac), 1.79 (s, 3H, CH3Ac), 1.68-1.63 (m, 2H, H-2linker), 1.63 (s, 3H, CH3Ac), 1.62-1.60 (m, 2H, H-4linker), 1.48-1.42 (m, 2H, H-3linker), 0.95 (d, J=6.5 Hz, 3H, H-6B), 0.74 (d, J=6.5 Hz, 3H, H-6D); 13C NMR (150 MHz, CDCl3) δ (ppm) 170.9 (COORAc), 169.6 (COORAc), 168.8 (COORAc), 164.5 (COORAZMB), 139.4 (CAr), 138.2 (CAr), 137.4 (CAr), 137.0 (CAr), 133.2-126.28 (20C, CAr, 19×CHAr), 104.3 (C-1A), 102.2, 101.8 (2C, C-7A, C-7C), 99.0 (C-1D), 98.4 (C-1B), 97.2 (C-1C), 83.1 (C-2A), 79.23, 79.16 (2C, C-4A, C-4C), 76.1 (C-3A), 75.7 (C-3C), 74.9 (CH2Bn), 74.5 (C-2C), 73.4 (C-3D), 70.4 (C-3B), 70.3 (C-1linker), 69.4, 69.0, 68.8, 68.5, 68.0 (5C, C-2B, C-2D, C-6A, C-6C, C-4B), 66.9, 66.41, 66.39, 66.37 (4C, C-5A, C-5B, C-5C, C-4D), 65.4 (C-5D), 57.2 (CH3OMe), 53.1 (CH2AZMB), 51.4 (C-5) 29.4 (C-2linker), 28.7 (C-4linker), 23.5 (C-3linker), 21.0 (CH3Ac), 20.8 (CH3Ac), 20.3 (CH3Ac), 16.1 (C-6B), 15.9 (C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C65H82N7O23 1328.54566; found 1328.54556; m/z [M+Na]+ calcd for C65H78N6NaO23 1333.50105; found 1333.50256.
(5-Azido-1-pentyl) 2-O-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-2-O-ortho-(azidomethyl)benzoyl-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-6-deoxy-α-L-talopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (31)
A solution of anhydrous DMSO (0.06 mL, 0.8 mmol, 10.0 equiv) in anhydrous DCM (1.4 mL) was cooled at −10° C. and PDCP (0.07 mL, 0.5 mmol, 6.0 equiv) and Et3N (0.11 mL, 0.80 mmol, 10.0 equiv) were successively added. A solution of alcohol 39 (108 mg, 0.0803 mmol, 1.0 equiv) in anhydrous DCM (0.4 mL) was added dropwise for 30 min. The mixture was stirred at −10° C. for 10 min under Ar, and for an additional 30 min while gradually being warmed to rt. Water (5 mL) was added to the solution, which was then transferred into a separatory funnel. The organic and aqueous layers were separated, and the aqueous phase was extracted with DCM (3×5 mL). The combined organic layers were washed with brine (10 mL), then dried over anhydrous MgSO4, and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Tol/EtOAc 9:1 to 8:2) to give the ketone as a white amorphous solid. The latter was solubilized in MeOH (1.1 mL) and DCM (0.4 mL) and cooled to −10° C. NaBH4 (12 mg, 0.32 mmol, 4.0 equiv) was slowly added and the mixture was stirred 1 h while gradually being warmed to 0° C. The solution was diluted with DCM (5 mL), transferred in a separatory funnel, and washed with water (5 mL). The aqueous phase was extracted with DCM (3×5 mL), the combined organic phases were washed with brine (10 mL) and dried over anhydrous MgSO4. The solution was concentrated under reduced pressure. The resulting crude alcohol (80.8 mg) was dissolved in anhydrous MeOH (2.3 mL) and anhydrous pyridine (2.3 mL). Thiourea (183 mg, 2.40 mmol) was added and the solution was stirred under Ar for 3 h at 60° C. The solvents were concentrated under reduced pressure and co-evaporated with toluene. The resulting white solid was dissolved in a 2:1 mixture of DCM/MeOH (10 mL) and washed with HCl 1N (10 mL). The aqueous phase was extracted with DCM (3×10 mL) and the combined organic layers were washed with saturated NaHCO3(aq) (30 mL) and brine (30 mL). The organic phase was dried over anhydrous MgSO4 and concentrated under reduced pressure. The residue was purified by silica gel flash chromatography (Tol/EtOAc 9:1 to 7:3) to give alcohol 31 (58.9 mg, 58% over 3 steps) as a white amorphous solid: Rf 0.5 (Tol/EtOAc 1:1); [α]D20−79 (c 0.9, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 8.01 (m, 1H, CHAZMB), 7.56-7.52 (m, 2H, 2×CHAr), 7.47-7.45 (m, 2H, 2×CHAr), 7.43 (m, 2H, 2×CHAr), 7.37-7.28 (m, 11H, 11×CHAr), 7.25-7.22 (m, 1H, CHAr), 5.54 (s, 1H, H-7C), 5.50 (s, 1H, H-7A), 5.30 (dd, J2-3=9.0 Hz, J2-1=7.8 Hz, 1H, H-2C), 5.22 (d, J=3.8 Hz, 1H, H-2B), 5.20 (s, 1H, H-1B), 5.02 (d, J=3.7 Hz, 1H, H-2D), 4.92 (d, J=7.8 Hz, 1H, H-1C), 4.88-4.85 (m, 4H, CHHBn, CH2AZMB, H-1D), 4.71 (d, J=10.8 Hz, 1H, CHHBn), 4.48 (d, J=7.8 Hz, 1H, H-1A), 4.36 (dd, J6a-6b=10.6 Hz, J6a-5=4.9 Hz, 1H, H-6aC), 4.33 (dd, J6a-6b=10.6 Hz, J6a-5=5.0 Hz, 1H, H-6aA), 4.13 (t, J=9.2 Hz, 1H, H-3C), 4.11-4.05 (m, 3H, H-3B, H-5B, H-5D), 3.94 (t, J=9.2 Hz, 1H, H-3A), 3.91-3.89 (m, 1H, H-1alinker), 3.80-3.74 (m, 2H, H-6bA, H-6bC), 3.68 (t, J=9.4 Hz, 1H, H-4C), 3.58-3.50 (m, 5H, H-1blinker, H-5C, H-4B, H-4D, H-4A), 3.45-3.39 (m, 3H, H-5A, H-2A, H-3D), 3.32 (s, 3H, CH3OMe), 3.19 (t, J=6.9 Hz, 2H, H-5linker), 2.22 (d, J=9.8 Hz, 1H, OH), 2.20 (d, J=8.5 Hz, 1H, OH), 1.78 (s, 3H, CH3Ac), 1.66-1.62 (m, 2H, H-2linker), 1.60 (s, 3H, CH3Ac), 1.59-1.56 (m, 2H, H-4linker), 1.45-1.40 (m, 2H, H-3linker), 0.93 (d, J=6.5 Hz, 3H, H-6B*), 0.90 (d, J=6.5 Hz, 3H, H-6D*); 13C NMR (150 MHz, CDCl3) δ (ppm) 168.9 (COORAc), 168.8 (COORAc), 164.6 (COORAZMB), 139.3 (CAr), 138.1 (CAr), 137.3 (CAr), 137.0 (CAr), 133.2-126.3 (20C, CAr, 19×CHAr), 104.2 (C-1A), 102.1, 101.8 (2C, C-7A, C-7C), 98.6, 98.4 (2C, C-1B, C-1D), 97.2 (C-1C), 83.0 (C-2A), 79.2 (2C, C-4A, C-4C), 76.1 (C-3A), 75.8 (C-3C), 74.9 (CH2Bn), 74.5 (C-2C), 73.9 (C-3D), 70.4 (C-3B), 70.2 (C-1linker), 69.34, 69.29, 68.9, 68.8 (4C, C-6A, C-6C, C-2B, C-4D), 68.0, 67.7, 67.2 (3C, C-4B, C-2D, C-5D), 66.8 (C-5C), 66.4 (2C, C-5A, C-5B), 56.3 (CH3OMe), 53.1 (CH2AZMB), 51.4 (C-5) 29.4 (C-2linker), 28.7 (C-4linker), 23.5 (C-3linker), 20.7 (CH3Ac), 20.3 (CH3Ac), 16.1, 16.0 (2C, C-6B, C-6D); HRMS (ESI-TOF) m/z [M+NH4]+ calcd for C63H80N7O22 1286.53509; found 1286.53314; m/z [M+Na]+ calcd for C63H76N6NaO22 1291.49049; found 1291;48805.
(5-Azido-1-pentyl) 2-O-acetyl-4-O-levulinoyl-3-para-methoxybenzyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (41)
PPh3 (3 mg, 0.01 mmol, 2.0 equiv) was added to a solution of disaccharide 26 (5 mg, 0.006 mmol, 1.0 equiv) in anhydrous THF (0.17 mL). The mixture was stirred at 60° C. under argon for 2 h, after which water (0.02 mL) was added. The solution was stirred for an additional 4 h at 60° C. and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (DCM/MeOH 95:5 to 8:2) to give disaccharide 41 (4 mg, 88%) as a white amorphous solid; Rf 0.5 (DCM/MeOH 8:2); [α]D20−41 (c 0.4, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.44-7.43 (m, 2H, 2×CH-Ar), 7.35-7.30 (m, 8H, 8×CH-Ar), 7.19 (m, 2H, 2×CHPMB), 6.85 (m, 2H, 2×CHPMB), 5.51 (s, 1H, H-7A), 5.43 (dd, J2-3=3.2 Hz, J2-4=1.7 Hz, 1H, H-2B), 5.17 (s, 1H, H-1B), 4.89-4.83 (m, 2H, H-4B, CHHPh), 4.69 (d, J=10.8 Hz, 1H, CHHPh), 4.58 (d, J=10.6 Hz, 1H, CHHPh), 4.49 (d, J=7.8 Hz, 1H, H-1A), 4.35 (dd, J6a-6b=10.6 Hz, J6a-5=5.0 Hz, 1H, H-6aA), 4.32 (d, J=11.6 Hz, 1H, CHHPh), 4.06 (dq, J5-4=12.5 Hz, J5-6=6.2 Hz, 1H, H-5B), 3.94-3.87 (m, 2H, H-1alinker, H-3A), 3.80-3.78 (m, 1H, H-3B), 3.77 (s, 3H, CH3PMB), 3.75 (m, 1H, H-6bA), 3.58-3.51 (m, 2H, H-1blinker, H-4A), 3.45-3.39 (m, 2H, H-2A, H-5A), 2.80 (br s, 2H, H-5linker), 2.71-2.66 (m, 1H, CHHLev), 2.62-2.57 (m, 1H, CHHLev), 2.48-2.38 (m, 2H, CH2Lev), 2.14 (s, 3H, CH3Lev), 2.05 (s, 3H, CH3Ac), 1.69-1.64 (m, 4H, H-2linker, H-4linker), 1.45-1.41 (m, 2H, H-3linker), 0.78 (d, J=6.2 Hz, 3H, H-6B). 13C NMR (600 MHz, CDCl3) δ (ppm) 206.4 (COLev), 172.0 (COORLev), 170.2 (COORAc), 159.3 (C-Ar), 137.9 (C-Ar), 137.2 (C-Ar), 130.4 (C-Ar), 129.5-126.3 (12C, 12×CH-Ar), 113.8 (2C, 2×CHPMB), 104.3 (C-1A), 101.8 (C-7A), 98.4 (C-1B), 82.7 (C-2A), 79.3 (C-4A), 76.3 (C-3A), 75.0 (CH2Ph), 74.6 (C-3B), 72.9 (C-4B), 71.1 (CH2Ph), 70.2 (C-1linker), 68.9 (C-6A), 68.5 (C-2B), 66.5 (2C, C-5A, C-5B), 55.4 (CH3PMB), 40.5 (C-5linker), 37.9 (CH2Lev), 30.0 (CH3Lev), 29.9 (C-2linker), 29.5 (C-4linker), 28.1 (CH2Lev), 23.4 (C-3) 21.1 (CH3Ac), 17.0 (C-6B); HRMS (ESI-TOF) m/z [M 30 H]+ calcd for C46H60NO14 850.40083; found 850.40044; m/z [M+Na]+ calcd for C46H53NNaO14 872.38278; found 872.3821.
(5-Amino-1-pentyl) 4,6-O-benzylidene-3-O-para-methoxybenzyl-β-D-glucopyranosyl-(1→3)-2-O-acetyl-4-O-levulinoyl-α-L-rhamnopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-d-glucopyranoside (42)
PPh3 (8 mg, 0.03 mmol, 4.0 equiv) was added to a solution of trisaccharide 27 (10 mg, 0.0078 mmol, 1.0 equiv) in anhydrous THF (0.23 mL). The mixture was stirred at 60° C. under argon for 2 h, after which water (0.02 mL) was added. The solution was stirred for an additional 4 h at 60° C. and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (DCM/MeOH 95:5 to 8:2) to give trisaccharide 42 (7 mg, 76%) as a white amorphous solid: Rf 0.4 (DCM/MeOH 8:2); [α]D20−42 (c 0.5, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.48-7.46 (m, 4H, 4×CH-Ar), 7.37-7.30 (m, 13H, 13×CH-Ar), 6.83-6.81 (m, 2H, 2×CH-Ar), 5.54 (s, 1H, H-7C), 5.52 (s, 1H, H-7A), 5.30 (distorted d, J=4.0 Hz, 1H, H-2B), 5.21 (s, 1H, H-1B), 4.97 (t, J=9.9 Hz, 1H, H-4B), 4.85-4.76 (m, 4H, CH2Bn, CH2PMB), 4.46 (d, J=7.7 Hz, 1H, H-1A), 4.41 (d, J=7.5 Hz, 1H, H-1C), 4.34 (dd, J6a-6b=10.4 Hz, J6a-5=4.7 Hz, 1H, H-6aC), 4.31 (dd, J6a-6b=10.5 Hz, J6a-5=4.9 Hz, 1H, H-6aA), 4.16 (dq, J5-4=16.5 Hz, J5-6=6.1 Hz, 1H, H-5B), 4.04 (dd, J3-4=9.8 Hz, J3-2=3.5 Hz, 1H, H-3B), 3.94-3.91 (m, 1H, H-3A), 3.88-3.85 (m, 1H,
H-1alinker), 3.80-3.75 (m, 4H, CH3PMB, H-6bC), 3.70-3.66 (m, 1H, H-6bA), 3.59-3.51 (m, 5H, H-1blinker, H-2C, H-3C, H 4C, H-4A), 3.49-3.46 (m, 1H, H-2A), 3.43-3.39 (m, 2H, H-5A, H-5C), 2.85-2.82 (m, 2H, H-5linker), 2.81-2.78 (m, 1H, CHHLev), 2.65-2.53 (m, 2H, CHHLev, CHHLev), 2.38-2.34 (m, 1H, CHHLev), 2.18 (s, 3H, CH3Lev), 2.04 (s, 3H, CH3Ac), 1.70-1.68 (m, 2H, H-2linker), 1.62-1.60 (m, 2H, H-4linker), 1.40-1.36 (m, 2H, H-3) 0.82 (d, J=6.1 Hz, 3H, H-6B); 13C NMR (150 MHz, CDCl3) δ (ppm) 207.7 (COLev), 172.4 (COORLev), 170.0 (COORAc), 159.3 (C-Ar), 138.1 (C-Ar), 137.6 (C-Ar), 137.3 (C-Ar), 131.0-126.2 (18C, C-Ar, 17×CH-Ar), 113.8 (2C, 2×CHPMB), 104.6, 104.2 (2C, C-1A, C-1C), 101.8, 101.3 (2C, C-7A, C-7C), 97.7 (C-1B), 82.7 (C-2A), 81.0, 79.3 (2C, C-4A, C-4C), 76.5, 76.0 (C-3A, C-301, 74.9 (2C, C-3B, CH2Bn), 74.4, 74.3 (2C, CH2PMB, C-201, 72.8 (C-4B), 71.4 (C-2B), 70.0 (C-1linker), 68.9, 68.8 (2C, C-6A, C-6C), 66.44, 66.35, 65.9 (3C, C-5A, C-5B, C-5C), 55.4 (CH3PMB), 39.9 (C-5linker), 37.9 (CH2Lev), 30.1 (CH3Lev), 29.9 (C-2linker), 29.2 (C-4linker), 27.4 (CH2Lev), 23.1 (C-3linker), 21.2 (CH3Ac), 16.9 (C-6B); HRMS (ESI-TOF) m/z [M+H]+ calcd for C59H74NO19 1100.48496; found 1100.48469; m/z [M+Na]+ calcd for C53H73NNaO19 1122.4669; found 1122.46659.
(5-Amino-1-pentyl) 2-O-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-4,6-O-benzylidene-β-D-glucopyranosyl-(1→3)-2-O-acetyl-6-deoxy-α-L-talopyranosyl-(1→3)-2-O-benzyl-4,6-O-benzylidene-β-D-glucopyranoside (43)
PPh3 (4 mg, 0.02 mmol, 4.0 equiv) was added to a solution of tetrasaccharide 31 (5 mg, 0.004 mmol, 1.0 equiv) in anhydrous THF (0.12 mL). The mixture was stirred at 60° C. under argon for 2 h, after which water (0.02 mL) was added. The solution was stirred for an additional 4 h at 60° C., and the solvents were evaporated under reduced pressure. The residue was purified by silica gel flash chromatography (DCM/MeOH 95:5 to 8:2) to give disaccharide 43 (2.8 mg, 70%) as a white amorphous solid: Rf 0.5 (DCM/MeOH 8:2); [α]D20−75 (c 0.2, CHCl3); 1H NMR (600 MHz, CDCl3) δ (ppm) 7.44-7.43 (m, 4H, 4×CH-Ar), 7.37-7.29 (m, 11H, 11×CH-Ar), 5.49 (2×s, 2H, H-7A, H-7C), 5.31 (s, 1H, H-1B*), 5.30 (d, J=2.7 Hz, 1H, H-2D), 5.28 (d, J=3.4 Hz, 1H, H-2B), 5.26 (s, 1H, H-1D*), 4.84 (d, J=10.9 Hz, 1H, CHHBn), 4.76 (d, J=10.9 Hz, 1H, CHHBn), 4.50-4.47 (m, 2H, H-1A, H-1C), 4.33 (td, J=10.2 Hz, J=4.9 Hz, 2H, H-6aA, H-6aC), 4.19-4.14 (m, 2H, H-5B, H-5D), 4.03 (t, J=3.5 Hz, 1H, H-3B), 3.95 (t, J=9.2 Hz, 1H, H-3A), 3.91-3.86 (m, 2H, H-1linker, H-3C), 3.75 (t, J=10.2 Hz, 2H, H-6bA, H-6bC), 3.60-3.58 (m, 2H, H-2C, H-4D), 3.54-3.50 (m, 5H, H-3D, H-4A, H-4B, H4C, H-1blinker), 3.46-3.42 (m, 3H, H-2A, H-5A, H-5C), 3.40 (s, 3H, CH3Me), 2.85 (br s, 2H, H-5linker), 2.11 (s, 3H, CH3Ac), 2.05 (s, 3H, CH3Ac), 1.75-1.67 (m, 2H, H-2linker), 1.65-1.58 (m, 2H, H-4linker), 1.41-1.38 (m, 2H, H-3linker), 1.03 (d, J=6.5 Hz, 3H, H-6B*), 0.92 (d, J=6.4 Hz, 3H, H-6D*); 13C NMR (150 MHz, CDCCl3) δ (ppm) 169.8 (COORAc), 168.9 (COORAc), 138.2 (C-Ar), 137.2 (2C, 2×C-Ar), 129.6-126.2 (15C, 15×CH-Ar), 104.2 (C-1A*), 102.0, 101.8 (2C, C-7A, C-7C), 101.4 (C-1C*), 98.4, 98.2 (2C, C-1B, C-1D), 83.0 (C-2A), 79.2, 78.8 (2C, C-4A, C-4C), 76.4, 76.3 (C-3A, C-3C), 75.8 (C-2C), 74.9 (CH2Bn), 74.3 (C-3D), 72.2 (C-3B), 70.0 (C-1linker), 69.7-66.2 (10C, C-2B, C-2D, C-4B, C-4D, C-5A, C-5B, C-5C, C-5D, C-6A, C-6C), 56.4 (CH3Me), 40.0 (C-5linker), 29.2 (C-4linker), 27.8 (C-2linker), 23.2 (C-3linker), 21.3 (CH3Ac), 21.2 (CH3Ac), 16.2, 16.0 (2C, C-6B, C-6D); HRMS (ESI-TOF) m/z [M+H]+ calcd for C55H74NO21 1084.47478; found 1084.47259; m/z [M+Na]+ calcd for C55H73NNaO21 1106.45673; found 1106.45461.
(5-Amino-1-pentyl) 2,4-di-O-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-β-D-glucopyranosyl-(1→3)-2-O-acetyl-6-deoxy-α-L-talopyranosyl-(1→3)-β-D-glucopyranoside hydrochloride (8)
Alcohol 40 (37 mg, 0.028 mmol, 1.0 equiv) was dissolved in DCE (0.3 mL) and MeOH (7.2 mL). The solution was degassed with Ar and Pd black (37 mg, 1 mg/mg of alcohol 40) and HCl (2.3 μL of a 12 N aq. solution, 0.028 mmol, 1.0 equiv) were successively added. The suspension was stirred under an atmosphere of H2 at 40° C. for 16 h. The mixture was filtered over Celite to remove the catalyst and the cake was rinsed with MeOH. The solution was concentrated under reduced pressure. The residue was purified by LH-20 resin (MeOH) followed by reverse phase chromatography (100% H2O to 1:1 H2O/MeOH) to give tetrasaccharide 8 (15 mg, 60%) as a white amorphous solid: Rf 0.3 (CHCl3/MeOH/H2O 10:10:3); [α]D20−34 (c 0.8, MeOH); 1H NMR (600 MHz, D2O) δ (ppm) 5.37 (d, J=3.1 Hz, 1H, H-4D), 5.28 (s, 2H, H-1B*, H-2D), 5.22-5.21 (m, 2H, H-1D*, H-2B), 4.63 (d, J=8.0 Hz, 1H, H-1C*), 4.52 (q, J=6.4 Hz, 1H, H-5D), 4.45 (d, J=8.1 Hz, 1H, H-1A), 4.36 (q, J=6.6 Hz, 1H, H-5B), 4.24 (t, J=3.6 Hz, 1H, H-3B), 3.98 (t, J=3.4 Hz, 1H, H-3D), 3.96-3.90 (m, 3H, H-1alinker, H-6aA*, H-4B), 3.85 (dd, J=12.3 Hz, J=2.0 Hz, 1H, H-6aC*), 3.75-3.66 (m, 3H, H-1blinker, H-6bA, H-6bC), 3.63-3.57 (m, 2H, H-4A, H-4C), 3.52-3.43 (m, 5H, H-2C*, H-3A, H-3C, H-5A, H-5C), 3.40 (s, 3H, CH3Me), 3.39-3.36 (m, 1H, H-2A*), 3.00 (t, J=7.2 Hz, 2H, H-5linker), 2.21 (s, 3H, CH3Ac), 2.17 (s, 3H, CH3Ac), 2.16 (s, 3H, CH3Ac), 1.71-1.64 (m, 4H, H-2linker, H-4linker), 1.48-1.43 (m, 2H, H-3linker), 1.24 (d, J=6.6 Hz, 3H, H-6B), 1.14 (d, J=6.6 Hz, 3H, H-6D); 13C NMR (150 MHz, D2O) δ (ppm) 174.4 (COORAc), 174.1 (COORAc), 173.7 (COORAc), 102.6, 102.4 (2C, C-1A, C-1C), 99.4, 99.3 (2C, C-1B, C-1D), 82.8, 82.6 (2C, C-4A, C-4C), 76.5, 76.4 (2C, C-3A, C-3C), 74.2, 74.1 (2C, C-2A, C-2C), 73.9, 73.6 (2C, C-3B, C-3D), 70.8, 70.7 (2C, C-1linker, C-2B), 70.1, 69.2, 68.8, 68.3, 68.1, 67.8 (6C, C-2D, C-4B, C-4D, C-5A, C-5B, C-5C), 66.3 (C-5D), 61.4, 61.1 (2C, C-6A, C-6C), 57.3 (CH3Me), 40.0 (C-5linker), 28.8 (C-4linker), 27.1 (C-2linker), 22.7 (C-3linker), 21.3 (CH3Ac), 21.1 (CH3Ac), 21.0 (CH3Ac), 16.0, 15.8 (2C, C-6B, C-6D); HRMS (ESI-TOF) m/z [M]+ calcd for C36H62NO22 860.3758; found 860.37759.
(5-Amino-1-pentyl) 2-O-acetyl-6-deoxy-3-O-methyl-α-L-talopyranosyl-(1→3)-β-D-glucopyranosyl-(1→3)-2-O-acetyl-6-deoxy-α-L-talopyranosyl-(1→3)-δ-D-glucopyranoside hydrochloride (9)
Tetrasaccharide 43 (2 mg, 0.002 mmol, 1.0 equiv) was dissolved in DCE (0.02 mL) and MeOH (0.5 mL). The solution was degassed with Ar and Pd black (2 mg, 1 mg/mg of tetrasaccharide 43) and HCl (0.2 μL of a 12 N aq. solution, 0.002 mmol, 1.0 equiv) were successively added. The suspension was stirred under an atmosphere of H2 at 40° C. for 16 h. The mixture was filtered over Celite to remove the catalyst and the cake was rinsed with MeOH. The solution was concentrated under reduced pressure. The residue was purified on reverse phase chromatography (100% H2O to 1:1 H2O/MeOH) to give tetrasaccharide 9 (1.5 mg, 92%) as a white amorphous solid; Rf 0.2 (CHCl3/MeOH/H2O 10:10:3); [α]D20−25 (c 0.2, MeOH); 1H NMR (600 MHz, D2O) δ (ppm) 5.25 (d, J=3.8 Hz, 1H, H-2D), 5.24 (s, 1H, H-1131, 5.22-5.21 (m, 2H, H-1D*, H-2B), 4.63 (d, J=8.0 Hz, 1H, H-1C*), 4.45 (d, J=8.1 Hz, 1H, H-1A*), 4.38-4.33 (m, 2H, H-5B, H-5D), 4.24 (t, J=3.6 Hz, 1H, H-3B), 3.96-3.95 (m, 2H, H-4B, H-4D), 3.94-3.90 (m, 2H, H-1alinker, H-6aA*), 3.85 (dd, J=12.3 Hz, J=2.0 Hz, 1H, H-6aC*), 3.79 (t, J=3.6 Hz, 1H, H-3D), 3.75-3.66 (m, 3H, H-1blinker, H-6bA, H-6bC), 3.61-3.57 (m, 2H, H-4A, H-4C), 3.50-3.43 (m, 5H, H2C*, H-3A, H-3C, H-5A, H-5C), 3.41 (s, 3H, CH3Me), 3.39-3.36 (m, 1H, H-2A*), 2.99 (t, J=7.2 Hz, 2H, H-5) 2.16 (s, 3H, CH3Ac), 2.14 (s, 3H, CH3Ac), 1.71-1.64 (m, 4H, H-2linker, H-4linker), 1.48-1.43 (m, 2H, H-3linker), 1.24 (d, J=6.6 Hz, 6H, H-6B, H-6D); 13C NMR (150 MHz, D2O) δ (ppm) 174.1 (COORAc), 173.9 (COORAc), 102.6, 102.4 (2C, C-1A, C-1C), 99.4, 99.3 (2C, C-1B, C-1D), 82.8, 82.4 (2C, C-4A, C-4C), 76.5, 76.4 (2C, C-3A, C-3C), 74.3, 74.2 (2C, C-2A, C-2C), 74.1, 73.9 (2C, C-3B, C-3D), 70.8, 70.7 (2C, C-1linker, C-2B), 69.2, 68.8, 68.6, 68.3, 68.2, 67.8, 67.7 (7C, C-2D, C-4B, C-4D, C-5A, C-5B, C-5C, C-5D), 61.4, 61.1 (2C, C-6A, C-6C), 56.2 (CH3Me), 40.0 (C-5linker), 28.8 (C-4linker), 27.1 (C-2linker), 22.7 (C-3linker) 21.3 (CH3Ac), 21.2 (CH3Ac), 16.04, 15.99 (2C, C-6B, C-6D); HRMS (ESI-TOF) m/z [M+H]+ calcd for C34H60NO21 818.36523; found 818.36495.
Human serum ELISAs: Serum samples from culture-confirmed Thai melioidosis patients (n=42) were assayed for reactivity with Bp OPS and oligosaccharides 1-9 essentially as previously described (Suttisunhakul, V.; Wuthiekanun, V.; Brett, P. J.; Khusmith, S.; Day, N. P.; Burtnick, M. N.; Limmathurotsakul, D.; Chantratita, N. Development of a rapid enzyme-linked immunosorbent assays for detection of antibodies to Burkholderia pseudomallei. J. Clin. Microbiol. 2016, 54, 1259-1268). Briefly, maleic anhydride 96-well plates (Pierce) were coated overnight at 4° C. with oligosaccharides 1-9 (5 μg·mL−1) or purified Bp OPS (native LPS from Burkholderia pseudomallei) (10 μg·mL−1) solubilized in carbonate buffer (pH 9.6). The coated plates were blocked at room temperature for 30 min with StartingBlock T20 (TBS) Blocking Buffer (SB; Pierce) and then incubated for 1 h at 37° C. with serum samples at a fixed dilution of 1/2000 in Tris-buffered saline+0.05% Tween 20 (TBS-T)+10% SB. To enable the detection, the plates were incubated for 1 h at 37° C. with 1/2000 dilution of goat anti-mouse IgG-horse radish peroxidase (HRP) conjugates (Southern Biotech). The plates were then developed with TMB substrate (KPL) and read at 620 nm. The data were plotted and analyzed using GraphPad Prism 5 (GraphPad Software Inc.).
The results depicted in
The scope of the claims should not be limited by the preferred embodiments set forth in the examples, but should be given the broadest interpretation consistent with the description as a whole.
The present description refers to a number of documents, the content of which is herein incorporated by reference in their entirety. These documents include, but are not limited to, the following:
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Filing Document | Filing Date | Country | Kind |
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PCT/CA2020/050516 | 4/17/2020 | WO | 00 |
Number | Date | Country | |
---|---|---|---|
62857346 | Jun 2019 | US |