The present invention relates generally to a system and method for analyzing functional imaging data to determine indicators of various pathologies with increased speed and accuracy. More particularly, the present invention relates to a system and method for evaluating a full spectrum of functional imaging data, such as cardiac ultrasound images or entire echocardiogram waveforms, to determine indicators of pathologies such as ischemia.
Functional imaging has traditionally included such modalities as ultrasound and nuclear imaging systems, including positron emission tomography (PET) systems and single photon emission computed tomography (SPECT) systems. In recent years, additional techniques have evolved, such as functional magnetic resonance imaging (fMRI), tagged MRI, and magnetoencephalography (MEG). Furthermore, echocardiograms have been utilized as another feedback component that can be used alone or in combination with these functional imaging techniques.
Heart disease has a very high incidence as well as a high rate of early mortality. The use of functional imaging systems and, in particular, echocardiography has become widespread as a diagnosis tool for identifying symptoms of heart disease. For example, the real-time nature of echocardiograms has allowed for the observation of myocardial motion and its synchronicity or the lack thereof. Furthermore, Doppler analysis has been indirectly used with various functional imaging systems to analyze heart valve function by measuring blood flow and observing turbulence.
Continual advancements in these functional imaging systems have enabled the identification of symptoms of heart disease or other ailments. For example, new analysis techniques have been developed that help identify changes in cardiac function (cyclic cardiac muscle deformations) in disease. In particular, by analyzing echocardiogram waveforms obtained before and after ischemia, physicians and technicians have been able to identify features within echocardiogram waveforms that are indicative of altered myocardial deformations. These alterations can then be related to disease symptoms or pathologies.
However, due to the complexity and variability of these waveforms in both normal hearts at their baseline condition and in the same hearts after occlusion of a coronary artery, the evaluation and analysis of these waveforms is extremely intensive and requires highly skilled determinations to be made in real or near real-time. Hence, a physician or technician must evaluate a baseline echocardiogram waveform and compare it to an echocardiogram waveform following ischemia and, in substantially real-time, to determine indicators of myocardial deformations or other symptoms of similar pathologies.
To make such analysis manageable, functional analysis methods rely on identifying changes in myocardial deformation expressed as strain waveforms derived from ultrasound data. However, movement of the myocardium includes a multitude of individual myocytes working in different directions in layers of the muscle, and timing of each contraction is not simultaneous throughout the heart due to differing electrical and mechanical activation of distinct myocardial regions. Thus, strain waveforms, even for normal regions of myocardium, have a large variability. Since the movement of the myocardium is extremely complex, functional analysis has been limited to merely comparing peaks or crossover points in the waveforms. Hence, only a small fraction of the data contained in the waveforms is considered during analysis.
Predominantly, these parameters are measurements of strain rate or strain magnitude, especially peaks during particular phases of the heart cycle, or alternatively, timings between selected events have been used. Examples of the latter, from both clinical and animal research studies, include the time from the ECG R-wave to peak negative strain and timing to various crossover points as strain or strain rate changes from positive to negative or vice versa. However, the strain waveform is rich in information about local myocardial function throughout the cardiac cycle and limiting the analysis to these particular events disregards a wealth of information that could be indicative of a particular pathology.
Furthermore, to perform the prescribed analysis, clinicians have been required to rely upon experience and observational skills to describe regional myocardial movements and identify segments of the heart that might be normal or ischemic. As such, considerable stress is placed upon the evaluator to simultaneously evaluate the waveforms and identify features within these complex and constantly varying waveforms that may indicate myocardial ischemia or other pathologies. As such, traditional diagnosis methods can be extremely subjective and prone to human error.
Therefore, it would be desirable to have a system and method for analyzing a wide variety of functional imaging data to determine indicators of various pathologies with increased speed and accuracy. For example, it would be desirable to have a system and method to aid in the interpretation and evaluation of a full spectrum of functional imaging data, such as cardiac ultrasound images or entire echocardiogram waveforms, to determine indicators of pathologies such as ischemia.
The present invention overcomes the aforementioned drawbacks by providing a system and method for probabilistically analyzing a full range of functional data to automatically categorize a waveform as normal or abnormal. The present invention analyzes the entire functional waveform through a cardiac cycle, as opposed to merely reviewing and comparing peaks or crossover points, to determine whether the cardiac waveform includes indicia of ischemic myocardium.
According to one embodiment of the present invention, a system for analyzing functional data to identify a given pathology is disclosed that includes a signal processor receiving functional waveform information from a device monitoring a cardiac cycle of a subject and normalizing the functional waveform over at least one portion of the functional waveform. The system also includes a neural network having a plurality of weights selected based on predetermined data and receiving and processing the normalized functional waveform based on the plurality of weights to generate at least one metric indicating a degree of relation between the normalized functional waveform and the predetermined data. A diagnostic interpretation module is included for receiving the at least one metric from the neural network and classifying the functional waveform as indicative of the given pathology or not indicative of the given pathology based on a comparison of the at least one metric to at least one probability distribution of a likelihood of the given pathology.
Various other features and advantages of the present invention will be made apparent from the following detailed description and the drawings.
a is a cross-sectional view of a left ventricle of a heart showing metrics used and calculated by the trainable diagnostic system of
b is a cross-sectional view of a left ventricle of a heart showing speckles tracked using the trainable diagnostic system of
The present invention provides a trainable system capable of assessing the probability of normal and abnormal segmental left ventricle (LV) function from patterns of local mechanical waveforms. In particular, the present invention is capable of performing the classification and analysis of a variety of data to perform cardiac mechanical function analysis in noisy and discontinuous LV borders in echo images.
Referring to
In the preferred embodiment, the functional scanner 12 is an echocardiographic scanner that allows measurement and tracking of basic cardiac information, such as thickness, dimensional, and radius data, and generates an ECG waveform 30, such as set forth in
When evaluating the heart, “strain” refers to the relative magnitude of regional myocardial deformation. In other words, strain is the relative change in length (longitudinal view) or thickness (transverse view) of a myocardial segment expressed as a percentage of its original length. More particularly, myocardial strain 32 is expressed as a fraction or a percentage of the end-diastolic status and can be calculated by numerical integration of strain rates over a period of one cardiac cycle (i.e., one R-R interval within the ECG waveform 30). Myocardial strain rate 34 is estimated by tissue Doppler echo from discrete velocities, where tissue Doppler echo provides a single dimensional component of myocardial deformation along the ultrasound beam axis and; therefore, the measured deformation magnitudes are angle-dependent. Hence, strain is calculated as:
where t0 and tT are time points of the start and end of the cardiac cycle. Accordingly, strain rate is calculated as:
where Δr is an offset of approximately 5 to 10 millimeters (mm) along the beam, while Vr and Vr+Δr are velocity points located Ar apart. Strain rate carries units of s−1.
Referring to
During evaluation processing, segments are selected from 2D images acquired by the functional scanner 12 of
The reference length for percentage of strain is set at the time point in the heart cycle of end-diastole. Although a distinct difference within waveforms may be visually perceivable, the variety of magnitudes and timings typically vary significantly in both the baseline and ischemic waveforms. Accordingly, the position tracker 18 of
Referring again to
In operation, a user measures, for example, time to relaxation (TR) interval, which is delimited by the R-wave location on the ECG waveform and the point of zero-crossing to relaxation on the strain rate waveform. Responsive thereto, the signal processor 16 measures the TR interval exactly and normalizes the amplitudes of the waveforms based on a resting heart rate. The TR interval changes from rest to stress by approximately −34±10% in normal and −12 (±18%) in ischemic segments. A variation difference in TR (denoted ‘DTR’) is expected in normal segments because the systolic phase, which the TR interval essentially spans, shortens during stress test tachycardia. On the other hand, in chronically ischemic segments, the DTR value is typically small because there is not an adequate mechanical response to stress. Hence, the waveforms provided by the functional scanner 12 are normalized in amplitude, for example, between −1.0 and +1.0, filtered, and sampled, for example, 70 times over the period of one heart cycle. However, the process of normalization and concatenation can be formalized so that the order of input waveforms is always the same for various training routines or designs. As will be described, any arrangement of input waveforms and parameters is acceptable for the NN 22.
The signal processor 16 includes two data outputs that are delivered and stored by the database 20. The first data output 46 provides “value” data, such as thickness values, dimensional data, and radius data. The second output 48 provides the derived strain rate waveform.
The second output 48 communicates the original ECG waveform 50, strain data 52, strain rate data 54, and pressure data 56. The information provided by the data outputs 46, 48 is received and stored by the database 20 along with projection and segment information provided by the position tracker 18. The data compiled in the database 20 is then sent to the NN 22 and diagnostic interpretation unit 24 for analysis and classification.
Neurons (or nodes) are the basic processing elements of the NN 22. Each node includes a weight, a bias, a summing function, and an output function. As the number of neuron layers and combinations of output functions increase, more complex and nonlinear classification problems can be solved more quickly. As will be described with respect to
To properly analyze the data provided to the NN 22, the NN 22 must be “taught” to make interpretations. To accomplish this, an initial, “virgin” NN system is trained on representative data and given correct answers to “learn” appropriate interpretations. Initially, the entire longitudinal and transverse strain waveforms may be sampled equally with an additional measure of the duration of the heart cycle. A pruning process may be performed by examining the weights of the NN 22 as it continues to learn. Also, it is contemplated that the weights could be recovered and mapped to the inputs to the NN 22 to provide insights about the diagnostic importance of the individual inputs. In this manner, inputs/features that are contributing the least to the classification process may be removed. For example, features such as additional sampled waveforms or parameters including thickness, radius of curvature, heart rate, and the like can be removed as desired. However, once training starts, the data format and arrangement should be kept unchanged. As will be described with respect to
In any case, it is contemplated that backpropagation may be used for training. Backpropagation is used to calculate derivatives of performance (perf) with respect to the weight and bias variables (X). Each variable can be adjusted according to gradient descent with momentum, such that the change in a particular variable is found as follows:
dX=mc·dxpre+lr·(1−mc)·dpref/dX′
where dXprev is the previous change to the weight or bias, mc is the momentum constant, and Ir is the learning rate. As is known in the art, the use of “momentum” when training a neural network reduces the probability that a backpropagation network will be caught in shallow minima. Training stops when any of the following conditions occur: 1) the maximum number of training cycles is reached, 2) the maximum amount of time has been reached, 3) performance has been minimized to a particular goal, or 4) the performance gradient falls below a set minimum.
As stated, it is contemplated that the NN 22 may be trained on representative waveforms and given correct answers (i.e., one of two output targets, such as +1 or −1) to “learn” appropriate classification of the input data. Referring now to
Unlike conventional NN designs, the inputs to the NN 22 of the present invention are not pre-determined parameters, such as peak values or timings to particular events, but individual landmark points (for example, 70) of the normalized waveforms sampled equidistantly during one cardiac cycle. For example, should the LV be divided into 18 segments, 2 waveforms with a sampling density of 70 landmark points per waveform would be used to represent mechanical performance within each segment, and that one input would be a variable (R-R interval duration). The NN 22 would, therefore, receive 18×2×70+1=2,521 inputs.
Referring again to
The diagnostic interpretation unit 24 utilizes a Bayesian probabilistic approach to classify the data interpreted by the NN 22. Such a Bayesian probabilistic analysis approach is described in Bretthors GL. Bayesian spectrum analysis and parameter estimation. In: Berger J, Fienberg S, Gani J, Krickeberg K, Singer B (Eds.). Lecture notes in statistics. Springer-Verlag, New York, N.Y. 1988. In accordance with one embodiment, the diagnostic interpretation unit 24 receives the metric from the NN 22 and automatically assigns it to a class of ‘normal’ or ‘abnormal’ waveforms using the available distributions of the DTR parameter discussed above. In the most basic of operations, the higher the positive value, the higher the likelihood of a “normal” condition. On the other hand, the lower the negative value, the higher the likelihood of an “abnormal” condition.
However, as is the case in any distribution, while each standard deviation from the mean is more easily classifiable, there is a plurality of values that may fall into an area that is less easily classifiable. Accordingly, it is preferable that the diagnostic interpretation unit 24 support diagnostic categories including ‘normal’, ‘uncertain’, and ‘abnormal’, to better resemble human judgments that typically involve some level of uncertainty. However, unlike analysis techniques that rely on human judgment to classify the waveform, since the NN 22 is capable of analyzing all data available, the metric provided to the diagnostic interpretation unit 24 is a significantly more accurate “scoring” analysis than could be provided by an individual evaluating peaks or crossing points in a waveform. Furthermore, by using a Bayesian probabilistic analysis, the diagnostic interpretation unit 24 provides a highly sophisticated analysis of the metric provided by the NN 22 based on a large population of comparative data.
Referring now to
DTR ε ωi if p(ωi|DTR)>p(ωj|DTR) for all j≠i.
Hence, a cardiac segment with a given value of DTR is predicted to be in class ωi if p(ωi|DTR) is a maximum value. However, the probabilities of p(ωi|DTR) are unknown. Since representative data is collected in the database 20, that data is then used to estimate the probability density function of DTR in each of the classes wa (i.e., p(DTR|ωi).
Assuming normal distributions of DTR in each of the diagnostic classes wu, the desired p(ωi|DTR) and the estimated p(DTR|ωi) are related by the Bayesian theorem as:
where p(ωi) is the prior probability of belonging to class ωi and p(DTR) is the total probability density of finding myocardium with the observed value DTR. Accordingly, the likelihood ratio is defined as the quantity:
Here, the values of p(ωi) and p(ωj) are called prior probabilities because they correspond to the probabilities of class memberships of a myocardial segment in the absence of data. Additionally, the values of p(ωi|DTR) and p(ωj|DTR) are posterior probabilities found from the Bayesian theorem. Therefore, the classification rule is:
DTR ε ωi if p(DTR|ωi)p(ωi)>p(DTR|ωj)p(ωj) for all j≠i,
where p(DTR) can be removed as a common factor. It is mathematically convenient if the classification rule defined above is applied as:
g(DTR)=ln {p(DTR|ωi) p(ωi)}=ln p(DTR|ωi)+ln p(ωi),
where ln is the natural logarithm. The classification rule can now be restated as:
DTR ε ωi if gi(DTR)>gj(DTR) for all j≠i,
The conceptual difference from simply assessing cutoff values can be illustrated by a review of the likelihood ratio (odds factor in favor of abnormality) values for DTR ranging from +10 to −50 by 5. The posterior probability of ischemia given a) prior odds of 1:1 (i.e., 50% probability) and b) prior odds 1:9 (ie, 10% prior probability) illustrate that, for values of DTR of −15 or “greater”, even with prior odds of 1:9 against ischemia, the posterior probability of ischemia is 27% or more. Likewise, for values of DTR between −25 and −20, the likelihood is approximately 1 and the posterior probability with prior odds 1:1 ranges from approximately 40% to almost 60%. Additionally, for values of DTR of −30 or “less”, even with prior odds of 1:1 (even odds) for ischemia (50% prior probability), the posterior probability of ischemia is approximately 27% or less. It should be noted that when DTR approaches −50, the posterior probability of ischemia paradoxically starts to increase. While this phenomenon is strongly dependent on the assumption of two Gaussian distributions (one dedicated to ‘normal’ conditions and the other dedicated to ‘abnormal’ conditions), and it would be advisable to not use the Gaussian model in this range of values, since this value of DTR rarely occurs under either assumption (i.e., normality or ischemia), it may be unnecessary to do so.
It should be noted that for reduced complexity, the above example utilizes only one parameter (i.e. DTR) for analysis and classification. However, it is contemplated that more than one parameter may also be utilized. As such, assuming that the joint probability distribution of parameters is approximated by a multivariate Gaussian distribution, the maximum likelihood classifier can be generalized as:
where xi is a data vector (the value of the parameters in a given cardiac segment), mi is the mean vector of the data in class ωi, and Σi is the covariance matrix of the data in class ωi.
Referring again to
In accordance with one embodiment, the notification may simply communicate that the system 10 has determined the acquired data to be ‘normal’, ‘abnormal’ or ‘inconclusive.’ In accordance with another embodiment, the displayed graphic representation may be a highlighting of segments determined to be ‘abnormal’ or ‘inconclusive’ superimposed over the corresponding ultrasound image of the segment. Furthermore, color codes or hue variations may be utilized to communicate the severity of a segment determined to be ‘abnormal’ with differing color codes or hue variations used to communicate segments determined to be ‘normal’ or ‘inconclusive.’
The waveform(s) evaluated in the above-described system is rich in information about local myocardial function throughout the cardiac cycle. As described, this information can be utilized to classify segments in a user-independent method as normal, abnormal, or even inconclusive/uncertain. Computer analysis of strain and strain rate patterns of deformation can utilize this information to aid physicians in the diagnosis of ischemia. Additionally, it is contemplated that the above-described system can be sufficiently flexible so that waveforms other than strain or additional input nodes can easily be added.
For example, referring now to
Again, each neural network 22a, 22b, 22c must be trained. In this regard, an iterative training process can be used. As described above, once training results meet the criteria for a given segment, training of another segment can begin. This loop of training, testing, pruning, re-training, and retesting continues for each segment. In the case of such segment-specific networks, each neural network 22a, 22b, 22c can be trained in parallel, where each neural network 22a, 22b, 22c is focused on respective segmental waveforms. In addition, it is contemplated that a network of segment specific networks can be used to represent relationships among the segments.
Therefore, the above-described system and method allows for the analysis of functional imaging data to determine indicators of various pathologies with increased speed and accuracy. More particularly, the use of a trained neural network and diagnostic interpretation unit allows for the evaluation of a full spectrum of functional imaging data, such as cardiac ultrasound images or entire echocardiogram waveforms, to determine indicators of pathologies such as ischemia with a speed and accuracy unattainable by traditional analysis techniques and systems.
The present invention has been described in terms of the preferred embodiment, and it should be appreciated that many equivalents, alternatives, variations, and modifications, aside from those expressly stated, are possible and within the scope of the invention. Therefore, the invention should not be limited to a particular described embodiment.
This application is based on U.S. Provisional Patent Application Ser. No. 60/672,493 filed on Apr. 18, 2005, and entitled “TRAINABLE IMAGING SYSTEM”.
This invention was made with government support under Grant No. NIH HL70363. The United States Government has certain rights in this invention.
Number | Date | Country | |
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60672493 | Apr 2005 | US |