Treatment of hepatitis C virus infection with sesquiterpene lactones

Information

  • Patent Application
  • 20040229936
  • Publication Number
    20040229936
  • Date Filed
    April 02, 2004
    20 years ago
  • Date Published
    November 18, 2004
    20 years ago
Abstract
This invention relates to a method for treating HCV infection. The method includes administering to a subject in need thereof an effective amount of one or more of sesquiterpene lactones having a γ-lactone fused with a 10-membered ring, an 8-membered ring that is further fused with a 4-membered ring, a 7-membered ring that is further fused with a 5-membered ring, or a 6-membered ring that is further fused with a 6-membered ring.
Description


BACKGROUND

[0002] Chronic and acute hepatitis C virus (HCV) infection has caused serious medical, social, and economical problems. Patients with chronic HCV infection may develop liver diseases, including cirrhosis and hepatocellular carcinoma. It is estimated that HCV infection has infected 170 million individuals worldwide, among whom 20 to 30% may develop cirrhosis and 1 to 3% may develop liver cancer.


[0003] HCV infection has been treated with a combination of interferon-a and ribavirin (1-b-D-ribofuranosyl-1,2,4-triazole-3-carboxamide). Although this combination therapy represents a major advance in treating HCV infection, it is only effective in a limited fraction of patients (30-50%) and almost 50% of the individuals who respond to the treatment suffer a relapse. The low efficacy of this treatment has driven the search for more effective drugs.



SUMMARY

[0004] The present invention is based on the unexpected discovery that certain sesquiterpene lactones are effective in treating HCV infection.


[0005] In one aspect, this invention features treating HCV infection by administering to a subject in need of the treatment an effective amount of a sesquiterpene lactone having a y-lactone fused with a 10-membered ring, fused with an 8-membered ring that is further fused with a 4-membered ring, fused with a 7-membered ring that is further fused with a 5-membered ring, or fused with a 6-membered ring that is further fused with a 6-membered ring. For example, one can administer to a subject having a HCV infection a sesquiterpene lactone, in which the y-lactone is substituted with a methylene group or an alkyl group.


[0006] “Treatment” refers to administering one or more sesquiterpene lactones to a subject, who has a HCV infection, a symptom of such an infection, or a predisposition toward such an infection, with the purpose to confer a therapeutic effect, e.g., to cure, relieve, alter, affect, ameliorate, or prevent the HCV infection, the symptom of it, or the predisposition toward it. Such a subject can be identified by a health care professional based on results from any suitable diagnostic method. “An effective amount” refers to the amount of one or more active sesquiterpene lactones that is required to confer a therapeutic effect on a treated subject. “Sesquiterpene lactones” include those present in natural resources, e.g. in a plant of the Compositae family, as well as those modified from naturally-occurring sesquiterpene lactones.


[0007] In particular, the invention features a method of treating a subject infected with HCV by administering to the subject an effective amount of a sesquiterpene lactone of the formula:
1


[0008] In this formula, each of R1 and R2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, aryl, heteroaryl, aralkyl, an amino acid moiety, a polypeptide moiety, F, Cl, Br, I, OR, SR, NRR′, C(O)R, COOR, or O(C)OR. is a single bond or a double bond. Each of Ra1 and Ra2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Ra1 and Ra2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Ra1 and Ra2, together with one of Rb, and Rb2, is a double bond, —CH2—, or —O—; or one of Ra1 and Ra2, together with one of Rd1 and Rd2, is a single bond or —O—; or one of Ra1 and Ra2, together with one of Re1 and Re2, is a single bond, —O—CR2—O—, or —O—; or one of Ra1 and Ra2, together with one of Rf1 and Rf2, is a single bond or —O—. Each of Rb1 and Rb2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Rb1 and Rb2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Rb1 and Rb2, together with one of Rc1 and Rc2, is a double bond, —CH2—, or —O—; or one of Rb1 and Rb2, together with one of Re1 and Re2, is a single bond, —CRR′-CH2—, or —O—; or one or Rb1 and Rb2, together with one of Rf1 and Rf2, is a single bond or —O—; or one or Rb1 and Rb2, together with one of Rg1 and Rg2, is a single bond or —O—. Each of Rc1 and Rc2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Rc1 and Rc2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Rc1 and Rc2, together with one of Rd1 and Rd2, is a double bond, —CH2—, or —O—; or one of Rc1 and Rc2, together with one of Rf1 and Rf2, is a single bond or —O—; or one of Rc1 and Rc2, together with one of Rg1 and Rg2, is a single bond or —O—; or one or Rc1 and Rc2, together with one of Rh1 and Rh2, is a single bond or —O—. Each of Rd1 and Rd2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Rd1 and Rd2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Rd1 and Rd2, together with one of Re1 and Re2, is a double bond, —CH2—, or —O—; or one of Rd1 and Rd2, together with one of Rf1 and Rf2, is —COO—; or one of Rd1 and Rd2, together with one of Rg1 and Rg2, is a single bond, —CRR′-CH2—, or —O—; or one of Rd1 and Rd2, together with one of Rh1 and Rh2, is a single bond or —O—. Each of Re1 and Re2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Re1 and Re2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Re1 and Re2, together with one of Rf1 and Rf2, is a double bond, —CH2—, or —O—; or one of Rc1 and Rc2, together with one of Rh1 and Rh2, is a single bond or —O—. Each of Rf1 and Rf2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Rf1 and Rf2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Rf1 and Rf2, together with one of Rg1 and Rg2, is a double bond, —CH2—, or —O—. Each of Rg1 and Rg2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Rg1 and Rg2, taken together, is a methylene group, a carbonyl group, or an epoxy group; or one of Rg1 and Rg2, together with one of Rh1 and Rh2, is a double bond, —CH2—, or —O—. Each of Rh1 and Rh2, independently, is H, alkyl, cycloalkyl, heterocycloalkyl, F, Cl, Br, I, OR, SR, C(O)R, COOR, or O(C)OR; or Rh1 and Rh2, taken together, is a methylene group, a carbonyl group, or an epoxy group. Each of R and R′, independently, is H, hydroxy, aryl, alkyl, cycloalkyl, heterocycloalkyl; or R and R′, taken together, is a cycloalkyl or heterocycloalkyl.


[0009] For example, one can administer to a subject infected with HCV a sesquiterpene lactone of the above formula, in which each of R1 and R2 is H and is a double bond. As another example, the subject is administered with a sesquiterpene lactone of the above formula, in which one of Ra1 and Ra2, together with one of Re1 and Re2, is a single bond; or one of Ra1 and Ra2, together with one of Rf1 and Rf2, is a single bond; one or Rb1 and Rb2, together with one of Rg1 and Rg2, is a single bond; or one of Rc1 and Rc2, together with one of Rg1 and Rg2, is a single bond.


[0010] A subject in need of treatment of HCV infection can also be concurrently administered with a sesquiterpene lactone of the above formula and one or more other therapeutic agents. Examples of such therapeutic agents include IFNα, Intron A, PEG-INTRON, Roferon A, Pegasys, Infergen A, Wellferon, Omniferon, Interferon Omega, Albuferon-α, Rebif, Rebetron, Symmetrel, an NS2—NS3 autoprotease inhibitor, an NS3 protease inhibitor (e.g., BILN-2061 and VX-950/LY-570310), an NS3 helicase, an NS4 cofactor inhibitor, an NS5B polymerase inhibitor (JTK-003), an IRES inhibitor (e.g., ISIS 14803 and Heptazyme), an inosine monophosphate dehydrogenase inhibitor (e.g., VX-497, Levovirin, and Viramidine), an E2 inhibitor (e.g., XTL-002), an antifibrotic (e.g., Actimmune (IFN-©) and IP-501), a caspase inhibitor (e.g., IDN-6556), a β-tubulin inhibitor (e.g., T67), an anti-HCV IgG (e.g., Civacir), an immunosuppressant (e.g., CellCept), and an immune modulator (e.g., Ceplene and Zadazin). See e.g., Tan et al., Nature Review in Drug Discovery, (2002) 1:867. The term “concurrently administered” refers to administering a sesquiterpene lactone and one or more other therapeutic agents at the same time or at different times during a treatment period.


[0011] The term “alkyl” refers to a linear or branched, saturated or unsaturated, non-aromatic C1-C10 hydrocarbon moiety, e.g., CH3 or CH═CHCH3. The term “cycloalkyl” refers to a saturated or unsaturated C3-C20 cyclic hydrocarbon moiety. The term “heterocycloalkyl” refers to a saturated or unsaturated C3-C20 cyclic moiety having at least one ring heteroatom, such as O, N, and S. The term “aralkyl” refers to an alkyl group substituted with aryl or heteroaryl, e.g., benzyl or pyridinylmethyl. The term “aryl” refers to a hydrocarbon moiety having at least one aromatic ring. Examples of an aryl moiety include phenyl, pheyylene, naphthyl, naphthylene, pyrenyl, anthryl, and phenanthryl. The term “heteroaryl” refers to a moiety having at least one aromatic ring which contains at least one heteroatom, such as O, N, and S. Examples of a heteroaryl moiety include furyl, furylene, fluorenyl, pyrrolyl, thienyl, oxazolyl, imidazolyl, thiazolyl, pyridyl, pyrimidinyl, quinazolinyl, and indolyl.


[0012] Alkyl, cycloalkyl, heterocycloalkyl, aralkyl, aryl, and heteroaryl mentioned herein include both substituted and unsubstituted moieties. Examples of substituents for cycloalkyl, heterocycloalkyl, aralkyl, aryl, and heteroaryl include alkyl, cycloalkyl, heterocycloalkyl, alkoxy, cycloalkoxy, heterocycloalkoxy, aryl, aryloxy, heteroaryl, heteroaryloxy, alkylsulfonyl, arylsulfonyl, heteroarylsulfonyl, amino, alkylamino, dialkylamino, arylamino, diarylamino, alkylimino, arylimino, amido, carbamoyl, thioamido, thiocarbamoyl, hydroxyl, halogen, mercapto, alkylmercapto, arylmercapto, cyano, nitro, acyl, acyloxy, carboxyl, and carboxylic esters. Examples of substituents for alkyl include all of the above substitutents except alkyl. Cycloalkyl, heterocycloalkyl, aryl, and heteroaryl also include fused groups.


[0013] Shown below are exemplary sesquiterpene lactones that can be used to practice the method of the invention:
2345678910


[0014] The sesquiterpene lactones described above include the compounds themselves, as well as their salts and their prodrugs, if applicable. A salt, for example, can be formed between an anion and a positively charged group (e.g., amino) on a sesquiterpene lactone. Suitable anions include chloride, bromide, iodide, sulfate, bisulfate, sulfamate, nitrate, phosphate, citrate, methanesulfonate, trifluoroacetate, maleate, succinate, fumarate, tartrate, salicylate, lactate, naphthalenesulfonate, and acetate. Likewise, a salt can also be formed between a cation and a negatively charged group (e.g., carboxylate) on a sesquiterpene lactone. Suitable cations include sodium ion, potassium ion, magnesium ion, calcium ion, and an ammonium cation such as tetramethylammonium ion. The sesquiterpene lactones also include those salts containing quaternary nitrogen atoms. Examples of prodrugs include esters and other pharmaceutically acceptable derivatives, which, upon administration to a subject, are capable of providing active sesquiterpene lactones.


[0015] Also within the scope of this invention is a composition containing one or more of the sesquiterpene lactones described above for use in treating HCV infection, and the use of such a composition for the manufacture of a medicament for the just-mentioned treatment.


[0016] The details of the embodiments of the invention are set forth in the description below. Other features, objects, and advantages of the invention will be apparent from the following description and from the claims.







DETAILED DESCRIPTION

[0017] This invention relates to use of one or more sesquiterpene lactones described in the summary section above for treating HCV infection. The sesquiterpene lactones can be found naturally or modified from naturally-occurring sesquiterpene lactones. Naturally-occurring sesquiterpene lactones can be obtained by extracting them from plants (e.g., of the Compositae family). For example, extraction is carried out by squeezing juice out of leaves of a Compositae plant. Alternatively, it can be carried out by immersing pulverized leaves in an organic solvent, such as ethanol, dichloromethane, or hexane. In the latter case, a crude extract can be produced either by a batch method or by a continuous method. The crude extract thus obtained is filtered or centrifuged to remove any insoluble materials. A sesquiterpene lactone is then isolated from the crude extract using liquid chromatography (e.g., high-pressure liquid chromatography) or other suitable methods.


[0018] Naturally-occurring sesquiterpene lactones can also be modified by synthetic methods well known in the chemical art. The scheme below depicts the syntheses of exemplary sesquiterpene lactones, i.e., compounds 41 and 44-54. Details of preparation of these compounds are provided in Examples 1-12, respectively.
11


[0019] As an example, the methylene group on y-lactone ring of parthenolide (a naturally-occurring sesquiterpene lactone) can be reduced to form a methyl group using a suitable reducing agent. (Kwok et al., Chem Biol (2001) 8(8): 759-66.) As another example, parthenolide can be modified with a secondary amine (e.g., dimethylamine) or a sulfur-containing compound (such as mercaptoethanol, cystine, or a cystine-containing peptide). Methods for obtaining various sesquiterpene lactones can be found in references 1-180 listed below.


[0020] The sesquiterpene lactones mentioned herein may contain a non-aromatic double bond and one or more asymmetric centers. Thus, they can occur as racemates and racemic mixtures, single enantiomers, individual diastereomers, diastereomeric mixtures, and cis- or trans-isomeric forms. All such isomeric forms are contemplated.


[0021] Also within the scope of this invention is a pharmaceutical composition contains an effective amount of at least one sesquiterpene lactone described above and a pharmaceutical acceptable carrier. This invention also covers a method of administering an effective amount of one or more sesquiterpene lactones to treat HCV infection. Effective doses will vary, as recognized by those skilled in the art, depending on the route of administration, excipient usage, and the possibility of co-usage with other therapeutic treatment.


[0022] To practice the method of the present invention, a composition having one or more sesquiterpene lactones can be administered parenterally, orally, nasally, rectally, topically, or buccally. The term “parenteral” as used herein refers to subcutaneous, intracutaneous, intravenous, intramuscular, intraarticular, intraarterial, intrasynovial, intrasternal, intrathecal, intralesional, or intracranial injection, as well as any suitable infusion technique.


[0023] A sterile injectable composition can be a solution or suspension in a non-toxic parenterally acceptable diluent or solvent, such as a solution in 1,3-butanediol. Among the acceptable vehicles and solvents that can be employed are mannitol, water, Ringer's solution, and isotonic sodium chloride solution. In addition, fixed oils are conventionally employed as a solvent or suspending medium (e.g., synthetic mono- or diglycerides). Fatty acid, such as oleic acid and its glyceride derivatives are useful in the preparation of injectables, as are natural pharmaceutically acceptable oils, such as olive oil or castor oil, especially in their polyoxyethylated versions. These oil solutions or suspensions can also contain a long chain alcohol diluent or dispersant, or carboxymethyl cellulose or similar dispersing agents. Other commonly used surfactants such as Tweens or Spans or other similar emulsifying agents or bioavailability enhancers which are commonly used in the manufacture of pharmaceutically acceptable solid, liquid, or other dosage forms can also be used for the purpose of formulation.


[0024] A composition for oral administration can be any orally acceptable dosage form including capsules, tablets, emulsions, and aqueous suspensions, dispersions, and solutions. In the case of tablets, commonly used carriers include lactose and corn starch. Lubricating agents, such as magnesium stearate, are also typically added. For oral administration in a capsule form, useful diluents include lactose and dried corn starch. When aqueous suspensions or emulsions are administered orally, the active ingredient can be suspended or dissolved in an oily phase combined with emulsifying or suspending agents. If desired, certain sweetening, flavoring, or coloring agents can be added.


[0025] A nasal aerosol or inhalation composition can be prepared according to techniques well known in the art of pharmaceutical formulation. For example, such a composition can be prepared as a solution in saline, employing benzyl alcohol or other suitable preservatives, absorption promoters to enhance bioavailability, fluorocarbons, and/or other solubilizing or dispersing agents known in the art. A composition having one or more active sesquiterpene lactones can also be administered in the form of suppositories for rectal administration.


[0026] A pharmaceutically acceptable carrier is routinely used with one or more active sesquiterpene lactones. The carrier in the pharmaceutical composition must be “acceptable” in the sense that it is compatible with the active ingredient of the composition (and preferably, capable of stabilizing the active ingredient) and not deleterious to the subject to be treated. One or more solubilizing agents can be utilized as pharmaceutical excipients for delivery of an active sesquiterpene lactone. Examples of other carriers include colloidal silicon oxide, magnesium stearate, cellulose, sodium lauryl sulfate, and D&C Yellow # 10.


[0027] Sesquiterpene lactones can be preliminarily screened for their efficacy in treating HCV infection by the following in vitro assays (See Examples 13, 14, and 15 below) and further screened by in vivo assays. (Yeh et al., J. Virol., (2001) 75:11017-11024.) Other methods will also be apparent to those of ordinary skill in the art.


[0028] The specific examples below are to be construed as merely illustrative, and not limitative of the remainder of the disclosure in any way whatsoever. Without further elaboration, it is believed that one skilled in the art can, based on the description herein, utilize the present invention to its fullest extent. All publications cited herein are hereby incorporated by reference in their entirety.



EXAMPLE 1


Preparation of Compound 41: 4,8,12-Trimethyl-3,14-dioxa-tricyclo-[9.3.0.02,4]tetradec-7-en-13-one

[0029] The title compound was obtained in 95% yield by reducing parthenolide (compound 1) in hydrogen gas in the presence of catalytic palladium on charcoal.


[0030]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.16-2.46 (m, 19H), 2.71 (d, J=9.3 Hz, 1H), 3.81 (t, J=9 Hz, 1H), 5.17 (dd, J=2.1, 12 Hz, 1H).



EXAMPLE 2


Preparation of Compound 44: 12-Dimethylaminomethyl-4,8-dimethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0031] Parthenolide (50 mg, 0.20 mmol) and dimethylamines (0.22 mmol) were dissolved in EtOH (6 mL) and the solution was stirred at room temperature overnight. The reaction mixture was quenched by adding water (3 mL) and extracted with ethyl acetate (3×20 mL). The organic layers were combined, dried, and concentrated in vacuo to give a residue, which was purified by silica gel column chromatography (AcOEt: n-hexane=1:1) to afford the title compound.


[0032]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.17-2.46 (m, 23H), 2.68 (ddd, J=4.6, 13.5, 36.3 Hz, 1H), 2.74 (d, J=9.3 Hz, 1H), 3.82 (t, J=9 Hz, 1H), 5.19 (dd, J=2.4, 12 Hz, 1H).


[0033] HRMS (EI) for C17H27NO3 (M+): calculated: 293.1991; found: 293.1992.



EXAMPLE 3


Preparation of Compound 45: 12-Diethylaminomethyl-4,8-dimethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0034] The title compound was prepared following the procedure described in Example 2 in the presence of diethylamine


[0035]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.01 (t, J=7.2 Hz, 6H), 1.17-2.59 (m, 20H), 2.72 (d, J=9 Hz, 1H), 2.80 (ddd, J=4.9, 14.1, 29.8 Hz, 2H), 3.81 (t, J=9 Hz, 1H), 5.15 (dd, J=2.4, 12 Hz, 1H).


[0036] HRMS (EI) for C19H31NO3 (M+): calculated: 321.2304; found: 321.2309.



EXAMPLE 4


Preparation of Compound 46: 4,8-Dimethyl-12-pyrrolidin-1-ylmethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0037] The title compound was prepared following the procedure described in Example 2 in the presence of pyrrolidine.


[0038]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.17-1.33 (m, 24H), 2.74 (d, J=9 Hz, 1H), 2.89 (qd, J=4.6, 12.6 Hz, 2H), 3.82 (t, J=8.85 Hz, 1H), 5.19 (dd, J=2.4, 12 Hz, 1H).


[0039] HRMS (E1) for C19H29NO3 (M): calculated: 319.2147; found: 319.2142.



EXAMPLE 5


Preparation of Compound 47: 4,8-Dimethyl-12-piperidin-1-ylmethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0040] The title compound was prepared following the procedure described in Example 2 in the presence of piperidine.


[0041]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.18-2.49 (m, 26H), 2.70 (ddd, J=5.3, 13.4, 43.8 Hz, 2H), 2.71 (d, J=8.7 Hz, 1H), 3.82 (t, J=9 Hz, 1H), 5.18 (dd, J=2.2, 11.8 Hz, 1H).


[0042] HRMS (EI) for C20H31NO3 (M+): calculated: 333.2304; found: 333.2305.



EXAMPLE 6


Preparation of Compound 48: 12-Azepan-1-ylmethyl-4,8-dimethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0043] The title compound was prepared following the procedure described in Example 2 in the presence of 1-aminohomopiperidine.


[0044]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.18-2.74 (m, 29H), 2.92 (t, J=4.0 Hz, 2H), 3.82 (t, J=8.8 Hz, 1H), 5.19 (dd, J=2.1, 12 Hz, 1H).


[0045] HRMS (E1) for C21H33NO3 (M+): calculated 347.2460; found: 347.2507.



EXAMPLE 7


Preparation of Compound 49: 4,8-Dimethyl-12-morpholin-4-ylmethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0046] The title compound was prepared following the procedure described in Example 2 in the presence of morpholine and purified using column chromatography (AcOEt: n-hexane=2:1).


[0047]

1
H NMR (300 MHz, CDCl3) 6 (ppm): 1.18-2.56 (m, 20H), 2.72 (d, J=9 Hz, 1H), 2.75 (ddd, J=5.4, 13, 26.1 Hz, 2H), 3.60 (t, J=4.5 Hz, 4H), 3.83 (t, J=9 Hz, 1H), 5.19 (dd, J=2.4, 12 Hz, 1H).


[0048] HRMS (EI) for C19H29NO4 (M+): calculated: 335.2097; found: 335.2098.



EXAMPLE 8


Preparation of Compound 50: 1-(4,8-Dimethyl-13-oxo-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-12-ylmethyl)-pyrrolidine-2-carboxylic acid

[0049] The title compound was prepared following the procedure described in Example 2 in the presence of L-proline and purified by using column chromatography (CH2Cl2: MeOH: H2O=15:4:1).


[0050]

1
H NMR (300 MHz, CDCl3) 8 (ppm): 1.21-2.49 (m, 19H), 2.91 (d, J=9.3 Hz, 1H), 3.07-3.71 (m, 4H), 3.84 (ddd, J=3, 7.5, 10.8 Hz, 1H), 4.00 (dd, J=4.8, 9.3 Hz, 1H), 4.15 (t, J=4.8 Hz, 1H), 5.26 (dd, J=2.1, 12 Hz, 1H).


[0051] HRMS (E) for C20H29NO5 (M+-COOH): calculated: 318.2069; found: 318.2082.



EXAMPLE 9


Preparation of Compound 51: 12-(2-Hydroxy-ethylsulfanylmethyl)-4,8-dimethyl-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0052] The title compound was prepared following the procedure described in Example 2 in the presence of 2-mercaptoethanol and purified by using column chromatography (CH2Cl2: MeOH=15:1).


[0053]

1
H NMR (300 MHz, CDCl3) 8 (ppm): 1.20˜2.84 (m, 20H), 3.00 (ddd, J=4.5, 13.8, 30 Hz, 2H), 3.79 (t, J=5.4 Hz, 2H), 3.87 (t, J=9 Hz, 1H), 5.21 (dd, J=2.1, 12 Hz, 1H).


[0054] HRMS (EI) for C20H29NO5 (C17H26O4S): calculated: 326.1552; found: 326.1542.



EXAMPLE 10


Preparation of Compound 52: 4,8-Dimethyl-12-(4-methyl-piperazin-1-ylmethyl)-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-13-one

[0055] The title compound was prepared following the procedure described in Example 2 in the presence of N-methylpiperazine and purified by using column chromatography (CH2Cl2: MeOH=15:1).


[0056]

1
H NMR (300 MHz, CDCl3) (ppm): 1.18-2.54 (m, 27H), 2.71 (d, J=8.7 Hz, 1H), 2.76 (ddd, J=4.9, 13.6, 29.2 Hz, 2H), 3.82 (t, J=9 Hz, 1H), 5.19 (dd, J=2.1, 12 Hz, 1H).


[0057] HRMS (EI) for C20H32N2O3 (M+): calculated: 348.2413; found: 348.2420.



EXAMPLE 11


Preparation of Compound 53: 2-Amino-3-(4,8-dimethyl-13-oxo-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-12-ylmethylsulfanyl)-propionic acid

[0058] The title compound was prepared following the procedure described in Example 2 in the presence of cysteine.


[0059]

1
H NMR (300 MHz, CDCl3) (ppm): 1.08-3.24 (m, 21H), 3.66 (dd, J=3.7, 7.9 Hz, 1H), 3.94 (t, J=9.1 Hz, 1H), 5.16 (dd, J=2.1, 12 Hz, 1H).


[0060] HRMS (E1) for C18H27NO5S (M+): calculated: 369.1610; found: 369.1654.



EXAMPLE 12


Preparation of Compound 54: 2-Amino-4-[1-(carboxymethyl-carbamoyl)-2-(4,8-dimethyl-13-oxo-3,14-dioxa-tricyclo[9.3.0.02,4]tetradec-7-en-12-ylmethylsulfanyl)-ethylcarbamoyl]-butyric acid

[0061] The title compound was prepared following the procedure described in Example 2 in the presence of a glycine-cysteine-glutamine peptide.


[0062]

1
H NMR (300 MHz, CDCl3) (ppm): 1.21-3.18 (m, 32H), 3.91 (s, 2H), 4.23 (t, J=9 Hz, 1H), 4.62 (dd, J=4.9, 8.5 Hz, 1H), 5.28 (dd, J=2.1, 12 Hz, 1H).


[0063] HRMS (EI) for C25H37N3O9S (M+): calculated: 555.2251; found: 555.2243.



EXAMPLE 13


Inhibition of Cell Growth

[0064] Compounds 1, 2, 20, 25, 37, 38, 41, 44-51, 53, and two control compounds (i.e. α-methylene-γ-lactone and isotonic anhydrate) were tested for their cytotoxicity using the following assay.


[0065] Huh-7 cells containing HCV sub-genomic replicons (Ava.5) were provided by Apath, LLC. (St. Louis, Mo.). See, e.g., Blight et al. (2000) Science 290: 1972-4. Cells were maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal calf serum (FCS) in a humidified atmosphere containing 5% of CO2. Cell viability was determined using 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium, inner salt (MTS), as described in Malich et al. (1997) Toxicology 124: 179-92. MTS, in the presence of phenazine methosulfate (PMS), produced a water-soluble formazan product that had an absorbance maximum at 490-500 nm in phosphate-buffered saline (PBS). See, e.g., Cory et al. (1991) Cancer Commun., 3:207-12.


[0066] MTS and PMS, both in powder form, were purchased from Sigma or Promega. MTS was dissolved in PBS (2 mg/mL) and PMS (0.38 mg/mL) was dissolved in ddH2O as stock solutions. Cells cultured in a 96-well microtiter plate were treated with the eight sesquiterpene lactones and the two control compounds at various concentrations. Prior to the assay, a 2 mL MTS/PMS solution containing MTS and PMS (20:1) was added to the cells with 8 mL of phenol red-free DMEM. The cell culture medium was then aspirated off, washed with PBS, and 100 μL of the MTS/PMS mixture was added into each well. After incubation at room temperature for 2 hr, optical densities of each sample were measured at OD490 with a 96-well microtiter plate reader. Data were obtained with six repeats for each treatment.


[0067] Each of the test compounds showed an IC50 value (i.e., the concentration at which cell growth was inhibited by 50%) greater than 10 μM except for compounds 25 and 50, which showed IC50 values of 1.6 μM and 8.1 μM, respectively.



EXAMPLE 14


Inhibition of HCV RNA Replication

[0068] Compounds 1, 2, 20, 25, 37, 41, 44-50, 53, and the two control compounds were tested at non-cytotoxic doses for their efficacy in inhibiting HCV infection.


[0069] Huh-7 cells containing HCV sub-genomic replicons (Ava.5) were maintained in DMEM supplemented with 10% heat-inactivated FCS in a humidified atmosphere containing 5% of CO2. The medium also contained 1 mg/mL G418 (an aminoglycosidic antibiotic agent obtained from Promega, WI) as a selective pressure for the maintenance of HCV replicon's RNA replication. See, e.g., Lohmann et al. (2001) J. Virol. 75: 1437-49. Cells were treated with sesquiterpene lactones and control compounds at various concentrations. Then, cells were harvested after 24 hr of the treatment. Subsequently, total cellular RNA's were extracted and quantified as follows.


[0070] Total RNA of cells was extracted using RNeasy Mini Kit (QIAGEN). The concentration of total RNA was measured by absorption at 260 nm. Total RNA (1 μg) was then mixed with 50 picomoles of HCV specific reverse primer: A9412, 5′-GATGGC CTATTG GCCTGG AGGGG-3′ (Lohmann et al. (2001) J. Virol. 75: 1437-49). RNA was added with RNase-free ddH2O to a final volume of 10.5 μL and denatured for 10 min at 65° C. Reverse transcription (RT) reactions were carried out at 42° C. for 1 hr using Expand-RT (Roche Biochemicals, Mannheim, Germany) in a total volume of 20 μL containing a previously denatured primer-RNA mixture, 1 mM each of deoxynucleotide triphosphates (dNTPs), 50 units reverse transcriptase, and 20 units RNase inhibitor (Promega, Madison, Wis.).


[0071] Quantitative PCR (Q-PCR) was carried out by LightCycler-DNA Master using SYBR Green 1 for real-time detection of double-stranded DNA (dsDNA) (Roche Diagnostics GmbH, Mannheim, Germany). The intensity of fluorescence was recorded versus PCR cycle numbers and the relative amounts of HCV RNA were calculated corresponding to the standard curve. The standard curve was derived from five serial dilutions of reference DNA, the corresponding cDNA of HCV RNA, under criteria recommended by the supplier.


[0072] The relative copy numbers HCV RNA and a house-keeping gene, glyceraldehyde-3-phosphate dehydrogenase (GADPH), were determined by Q-PCR utilizing the following primer sets:


[0073] HCV primers (positive strand):
1Forward:5′-ACCAGAATACGACTTGGAGTTGAT(SEQ ID NO:1)AA-3′Reverse:5′-CACCCTTTTGCCAGATGCAT-3′(SEQ ID NO:2)


[0074] HCV primers (negative strand):
2Forward:5′-CTCGACGTTGTCACTGA-3′(SEQ ID NO:3)Reverse:5′-CCATCCGAGTACGTGC-3′(SEQ ID NO:4)


[0075] GADPH primers
3Forward primer:5′-GAAGGTGAAGGTCGGAG(SEQ ID NO:5)TC-3′Reverse primer:5′-GAAGATGGTGATGGGATT(SEQ ID NO:6)TC-3′


[0076] PCR was performed as followed: (i) denaturing conditions: 95° C., 60 sec; (ii) amplification conditions: ramp to 95° C., 0 sec; 64° C., 10 sec; 72° C., 10 sec. The specificity of an amplification reaction was determined by performing a melting curve analysis with a temperature range from 65° C. to 95° C.


[0077] HCV RNA copy numbers were divided by their corresponding GADPH copy numbers in the same sample for normalization. Effect of sesquiterpene lactones on HCV RNA replication was represented by “relative copy number,” which was obtained by comparing HCV RNA copy numbers with sesquiterpene lactones treatment to HCV RNA copy numbers without sesquiterpene lactones treatment. The latter was designated as 100%. All measurements were performed in triplicates to reach statistical significance. Sesquiterpene lactones inhibited replication of HCV RNA positive strand in a dose-dependent manner.


[0078] Unexpectedly, each of compounds 1, 2, 20, 25, 37, 44-48, and 50 was found to have an EC50 value (i.e., the effective concentration at which HCV RNA replication was inhibited by 50%) no greater than 3 μM. Each of compounds 49 and 53 was found to have an EC50 value no greater than 6 μM.



EXAMPLE 15

[0079] Compound 1, interferon-α (IFNα), and a combination of compound 1 and IFNα were tested for their efficacy in inhibiting HCV infection using the HCV RNA replication assay described above.


[0080] It was found that compound 1 inhibited HCV RNA replication in a dose dependent manner. At concentration 0.625 μM, 1.25 μM, 2.5 μM, and 5 μM, compound 1 inhibited 37%, 47%, 70%, and 83% of HCV RNA replication, respectively.


[0081] It was also found that the combination of compound 1 and IFNα was more effective in inhibiting HCV RNA replication than IFNα alone. More specifically, 50 IU/1 mL and 100 IU/mL of IFNα alone respectively inhibited 25% and 40% of HCV RNA replication. In contrast, 50% and 70% of HCV RNA replication were inhibited by 50 IU/mL IFNα combined with 0.1 μM compound 1 and 100 IU/mL of IFNα combined with 0.1 μM compound 1, respectively.



Other Embodiments

[0082] All of the features disclosed in this specification may be combined in any combination. Each feature disclosed in this specification may be replaced by an alternative feature serving the same, equivalent, or similar purpose. Thus, unless expressly stated otherwise, each feature disclosed is only an example of a generic series of equivalent or similar features.


[0083] From the above description, one skilled in the art can easily ascertain the essential characteristics of the present invention, and without departing from the spirit and scope thereof, can make various changes and modifications of the invention to adapt it to various usages and conditions. Thus, other embodiments are also within the scope of the following claims.



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Claims
  • 1. A method for treating hepatitis C virus infection, comprising administering to a subject in need thereof an effective amount of a sesquiterpene lactone having a γ-lactone fused with a 10-membered ring, an 8-membered ring that is further fused with a 4-membered ring, a 7-membered ring that is further fused with a 5-membered ring, or a 6-membered ring that is further fused with a 6-membered ring.
  • 2. The method of claim 1, wherein the y-lactone is substituted with a methylene group.
  • 3. The method of claim 1, wherein the y-lactone is substituted with an alkyl group.
  • 4. The method of claim 1, wherein the sesquiterpene lactone is concurrently administered in combination with a second therapeutic agent, in which the second therapeutic agent is IFNα, Intron A, PEG-INTRON, Roferon A, Pegasys, Infergen A, Wellferon, Omniferon, Interferon Omega, Albuferon-α, Rebif, Rebetron, Symmetrel, an NS2-NS3 autoprotease inhibitor, an NS3 protease inhibitor, an NS3 helicase, an NS4 co-factor inhibitor, an NS5B polymerase inhibitor, an IRES Inhibitor, an inosine monophosphate dehydrogenase inhibitor, an E2 inhibitor, an antifibrotic, a caspase inhibitor, a β-tubulin inhibitor, an anti-HCV IgG, an immunosuppressant, or an immune modulator.
  • 5. A method for treating hepatitis C virus infection, comprising administering to a subject in need thereof an effective amount of a sesquiterpene lactone of the formula:
  • 6. The method of claim 5, wherein each of R1 and R2 is H and is a double bond.
  • 7. The method of claim 6, wherein each of Ra1 and Ra2, independently, is H; each of Rb1 and Rb2, independently, is H or alkyl; or one of Ra1 and Ra2, together with one of Rb1 and Rb2, is a double bond or —O—; each of Rc1 and Rc2, independently, is H, OR, or O(C)OR; or one of Rb1 and Rb2, together with one of Rc1 and Rc2, is a double bond or —O—; each of Rd1 and Rd2, independently, is H or OR; or one of Rc1 and Rc2, together with one of Rd1 and Rd2, is —O—; each of Re1 and Re2, independently, is H or OR; each of Rf1 and Rf2, independently, is H, alkyl, OR, COOR, or O(C)OR; or Rf1 and Rf2, taken together, is a methylene group; or one of Re1 and Re2, together with one of Rf1 and Rf2, is a double bond or —O—; each of Rg1 and Rg2, independently, is H, OR, O(C)OR; or Rg1 and Rg2, taken together, is a carbonyl group; or one of Rf1 and Rf2, together with one of Rg1 and Rg2, is a double bond; and each of Rh1 and Rh2, independently, is H, OR, or O(C)OR.
  • 8. The method of claim 7, wherein the sesquiterpene lactone is
  • 9. The method of claim 6, wherein one of Ra1 and Ra2, together with one of Re1 and Re2, is a single bond.
  • 10. The method of claim 9, wherein the other of Ra1 and Ra2 is H or alkyl; each of Rb1 and Rb2, independently, is alkyl; or Rb1 and Rb2, taken together, is a methylene group or a carbonyl group; each of Rc1 and Rc2, independently, is H or OR; or one of Rb1 and Rb2, together with one of Rc1 and Rc2, is a double bond; each of Rd1 and Rd2, independently, is H; or Rd1 and Rd2, taken together, is a carbonyl group; or one of Rc1 and Rc2, together with one of Rd1 and Rd2, is a double bond; the other of Re1 and Re2 is H; each of Rf1 and Rf2, independently, is H or alkyl; or Rf1 and Rf2, taken together, is a methylene group; each of Rg1 and Rg2, independently, is H; and each of Rh1 and Rh2, independently, is H or O(C)OR.
  • 11. The method of claim 10, wherein the sesquiterpene lactone is
  • 12. The method of claim 6, wherein one of Rc1 and Rc2, together with one of Rg1 and Rg2, is a single bond.
  • 13. The method of claim 12, wherein each of Ra1 and Ra2, independently, is H; each of Rb1 and Rb2, independently, is H or alkyl; the other of Rc1 and Rc2 is H; or one of Rb1 and Rb2, together with the other of Rc1 and Rc2, is a double bond; each of Rd1 and Rd2, independently, is H or OR; each of Re1 and Re2, independently, is H or OR; or one of Rd1 and Rd2, together with one of Re1 and Re2, is a double bond; each of Rf1 and Rf1 independently, is H, alkyl, or OR; or Rf1 and Rf2 taken together, is a carbonyl group; the other of Rg1 and Rg2 is H or alkyl; and each of Rh1 and Rh2, independently, is H, OR, or O(C)OR.
  • 14. The method of claim 13, wherein the sesquiterpene lactone is
  • 15. The method of claim 6, wherein one of Ra1 and Ra2, together with one of Rf1 and Rf2, is a single bond.
  • 16. The method of claim 15, wherein the other of Ra1 and Ra2 is H; each of Rb1 and Rb2, independently, is H or alkyl; or Rb1 and Rb2, taken together, is a methylene group; each of Rc1 and Rc2, independently, is H; or Rc1 and R12, taken together, is a carbonyl group; or one of Rb1 and Rb2, together with one of Rc1 and Rc2, is a double bond; each of Rd1 and Rd2, independently, is H; each of Re1 and Re2, independently, is H or OR; or one of Rd1 and Rd2, together with one of Re1 and Re2, is a double bond; the other of Rf1 and Rf2 is alkyl; each of Rg1 and Rg2, independently, is H; and each of Rh1 and Rh2, independently, is H or O(C)OR.
  • 17. The method of claim 6, wherein one or Rh1 and Rb2, together with one of Rg1 and Rg2, is a single bond.
  • 18. The method of claim 17, wherein each of Ra1 and Ra2, independently, is H; the other of Rb1 and Rb2 is alkyl; each of Rc1 and Rc2, independently, is H or OR; each of Rd1 and Rd2, independently, is H; or one of Rc1 and Rc2, together with one of Rd1 and Rd2, is a double bond; each of Re1 and Re2, independently, is H; or Re1 and Re2, taken together, is a carbonyl group; each of Rf1 and Rf2, independently, is H or alkyl; or Rf1 and Rf2, taken together, is a methylene group; the other of Rg1 and Rg2 is H or OR; and each of Rh1 and Rh2, independently, is H; or the other of Rg1 and Rg2, together with one of Rh1 and Rh2, is a double bond.
  • 19. The method of claim 18, wherein the sesquiterpene lactone is
  • 20. The method of claim 5, wherein is a single bond.
  • 21. The method of claim 20, wherein each of R1 and R2, independently, is H, heterocycloalkyl, SR, or NRR′.
  • 22. The method of claim 21, wherein one of Ra1 and Ra2, together with one of Rb1 and Rb2, is —O—.
  • 23. The method of claim 22, wherein one of Re1 and Re2, together with one of Rf1 and Rf2, is a double bond.
  • 24. The method of claim 23, wherein the sesquiterpene lactone is
  • 25. The method of claim 20, wherein one of Ra1 and Ra2, together with one of Rf1 and Rf2, is a single bond.
  • 26. The method of claim 25, wherein the other of Ra1 and Ra2, together with one of Rb1 and Rb2, is a double bond or —O—; the other of Rb1 and Rb2 is H or alkyl; Rc1 and Rc2, taken together, is a carbonyl group; one of Rd1 and Rd2 is H; the other of Rd1 and Rd2, together with one of Re1 and Re2, is a double bond or —O—; the other of Re1 and Re2 is H; the other of Rf1 and Rf2 is alkyl; each of Rg1 and Rg2, independently, is H; and each of Rh1 and Rh2, independently, is H.
  • 27. The method of claim 5, wherein the sesquiterpene lactone is concurrently administered in combination with a second therapeutic agent, in which the second therapeutic agent is IFNα, Intron A, PEG-INTRON, Roferon A, Pegasys, Infergen A, Wellferon, Omniferon, Interferon Omega, Albuferon-α, Rebif, Rebetron, Symmetrel, an NS2-NS3 autoprotease inhibitor, an NS3 protease inhibitor, an NS3 helicase, an NS4 co-factor inhibitor, an NS5B polymerase inhibitor, an IRES Inhibitor, an inosine monophosphate dehydrogenase inhibitor, an E2 inhibitor, an antifibrotic, a caspase inhibitor, a α-tubulin inhibitor, an anti-HCV IgG, an immunosuppressant, or an immune modulator.
  • 28. A sesquiterpene lactone of the formula:
  • 29. The sesquiterpene lactone of claim 28, wherein each of R1 and R2, independently, is H, heterocycloalkyl, SR, or NRR′.
  • 30. The sesquiterpene lactone of claim 29, wherein one of Ra1 and Ra2, together with one of Rb1 and Rb2, is —O—.
  • 31. The sesquiterpene lactone of claim 30, wherein one of Re1 and Re2, together with one of Rf1 and Rf2, is a double bond.
  • 32. The sesquiterpene lactone of claim 31, wherein the sesquiterpene lactone
CROSS REFERENCE TO RELATED APPLICATION

[0001] Pursuant to 35 U.S.C. § 119(e), this application claims priority to U.S. Provisional Application Ser. No. 60/459,769, filed Apr. 2, 2003.

Provisional Applications (1)
Number Date Country
60459769 Apr 2003 US