Patent Application
20140178462
The present invention relates to improvements in or relating to amphoteric liposomes comprising neutral lipids.
Amphoteric liposomes have been found to exhibit excellent biodistribution and to be well tolerated in animals. They can encapsulate active agents, including nucleic acid molecules, with high efficiency.
In contrast to zwitterionic structures, amphoteric liposomes advantageously have an isoelectric point and are negatively charged at higher pH values and positively charged at lower pH values. Amphoteric liposomes belong to the larger group of pH-sensitive liposomes that were introduced by Straubinger, et al. (FEBS Lett., 1985, 179(1), 148-154). Typical pH-responsive elements in pH-sensitive liposomes are cholesterol hemisuccinate (CHEMS), palmitoylhomocysteine, dioleoylglycerol hemisuccinate (DOG-Succ) and the like. CHEMS can stabilise dioleoylphosphatidylethanolamine (DOPE), a lipid which preferentially adopts the inverted hexagonal phase at temperatures above 10° C., into the lamellar phase at pH 7.4. Lamellar CHEMS/DOPE systems can be prepared at neutral or slightly alkaline pH but these systems become unstable and fuse at acidic pH (Hafez and Cullis, Biochim. Biophys. Acta, 2000, 1463, 107-114).
Fusogenic liposomes are very useful in pharmaceutical applications, especially for the intracellular delivery of drugs, e.g., nucleic acids, such, for example, as plasmids and oligonucleotides. After the uptake of a liposome into a cell by endocytosis the release of the drug from the endosome is a crucial step for the delivery of a drug into the cytosol of cells. The pH within an endosome is slightly acidic and therefore pH sensitive liposomes can fuse with the endosomal membrane and thereby allowing the release of the drug from the endosome. This means that destabilisation of the lipid phase, e.g., by enhanced fusogenicity, facilitates endosome escape and intracellular delivery. Also other environments of low pH can trigger the fusion of such liposomes, e.g., the low pH found in tumors or sites of inflammation.
Hafez, et al. (Biophys. J. 2000, 79(3), 1438-1446) were unsatisfied with the limited control over the pH at which such fusion occurs and demonstrated a rational approach to fine-tune the fusion point by adding cationic lipids. Such mixtures have true amphoteric properties in that they exist in a cationic state at low pH and as anionic particles at higher pH, typically at physiological pH. According to Hafez, et al. fusion starts at pH values where the net charge of the particles is zero (their isoelectric point), and once such point is crossed (the pH is lower to any extent) fusion is a continuous process. This view is shared by Li and Schick (Biophys. J., 2001, 80, 1703-1711) who analysed the fusion tendency for amphoteric lipid mixtures using a mathematical model.
Israelachvili and Mitchell in 1975 (Biochim. Biophys. Acta, 1975, 389, 13-19) introduced the molecular shape concept which assumes that the overall form of lipid molecules determines the structure of the hydrated lipid membrane. This means that the lipid geometry and more specifically the size ratio between the polar head-group and the hydrophobic membrane anchor is the key parameter determining the lipid phase (Israelachvili, et al. Biochim Biophys Acta. 1977 17; 470(2):185-201). The original theory however did not consider counterions being a steric part of the polar head-group, but this was contributed by Li and Schick (Biophys. J., 2001, 80, 1703-1711). In their description of the DODAC/CHEMS system, the sodium ion enlarges the head-group of CHEMS at neutral pH, but dissociates as the pH drops, thus minimising the head-group volume and promoting a hexagonal phase; DODAC as a strong cation is assumed to be in constant association with its respective counterion, irrespective of the pH. The model predicts fusion at some pH and below.
Lipid phases according to the molecular shape concept (Israelachvili et al., 1980, Q. Rev. Biophys., 13(2), 121-200):
The addition of neutral lipids to amphoteric lipid mixtures has been found to have little impact on the isoelectric point of amphoteric liposomes. WO 02/066012 (Panzner, et al.) discloses certain amphoteric liposomes comprising neutral lipids with a stable size at both low and neutral pHs. WO 02/066012 also describes a method of loading such particles with nucleic acids starting from a low pH.
WO 05/094783 of Endert et al. discloses amphoteric liposome formulations comprising a mixture of phosphatidylcholines and cholesterol as neutral lipids, whereas the molar amount of cholesterol is between 35 and 40 mol %.
WO 07/031,333 of Panzner et al. discloses amphoteric liposomes comprising a mixture of phosphatidylcholine and phosphatidylethanolamine as neutral lipids.
Amphoteric liposomes are complex structures and comprise at least a complementary pair of charged lipids. The inclusion of one or more such neutral or zwitterionic lipids significantly adds to the complexity of the mixture, especially since the individual amounts of the components may vary.
It is an object of the present invention therefore to provide improved formulations of amphoteric liposomes comprising neutral lipids.
Another object of the invention is to provide improved formulations of amphoteric liposomes that allow transfection of cells.
Yet another object of the invention is to provide pharmaceutical compositions comprising such liposomes as a carrier for the delivery of active agents or ingredients, including drugs such as nucleic acid drugs, e.g., oligonucleotides and plasmids into cells or tissues.
According to one aspect of the present invention therefore there are provided amphoteric liposomes comprising neutral lipids wherein said neutral lipids are selected from the group comprising cholesterol or mixtures of cholesterol and at least one neutral or zwitterionic lipid and wherein κ(neutral) of said mixture is 0.3 or less.
Preferably κ(neutral) of said mixture of cholesterol and at least one neutral or zwitterionic lipid is less than 0.25, preferably less than 0.2 and most preferred less than 0.15.
In some embodiments said mixture of cholesterol and at least one neutral or zwitterionic lipid is selected from the group consisting of
Suitably said phosphatidylethanolamines may be selected from the group of DOPE, POPE, DPhyPE, DLinPE, DMPE, DPPE, DSPE or natural equivalents thereof, wherein DOPE is the most preferred one.
The phosphatidylcholines may be selected from the group POPC, DOPC, DMPC, DPPC, DSPC or natural equivalents thereof, such as soy bean PC or egg-PC wherein POPC or DOPC are the preferred ones.
The amphoteric liposomes according to the present invention comprise one or more or a plurality of charged amphiphiles which in combination with one another have amphoteric character.
In one aspect of the invention said charged amphiphiles are amphoteric lipids.
Suitably said amphoteric lipid may be selected from the group consisting of HistChol, HistDG, isoHistSuccDG, Acylcarnosin and HCCHol.
Alternatively the amphoteric liposomes according to the present invention comprise a mixture of lipid components with amphoteric properties, wherein said mixture of lipid components comprises at least one pH responsive component.
Said mixture of lipid components may comprise (i) a stable cationic lipid and a chargeable anionic lipid, referred to as amphoter I mixture (ii) a chargeable cationic lipid and chargeable anionic lipid, referred to as amphoter II mixture or (iii) a stable anionic lipid and a chargeable cationic lipid, referred to as amphoter III mixture.
In one embodiment of the invention the isoelectric point of the amphoteric liposomes is between 4 and 7, preferably between 4.5 and 6.5 and most preferred between 5 and 6.
Said anionic lipids may be selected from, but are not limited to, the group consisting of diacylglycerolhemisuccinates, e.g. DOGS, DMGS, POGS, DPGS, DSGS; diacylglycerolhemimalonates, e.g. DOGM or DMGM; diacylglycerolhemiglutarates, e.g. DOGG, DMGG; diacylglycerolhemiadipates, e.g. DOGA, DMGA; diacylglycerolhemicyclohexane-1,4-dicarboxylic acids, e.g. DO-cHA, DM-cHA; (2,3-Diacyl-propyl)amino}-oxoalkanoic acids e.g. DOAS, DOAM, DOAG, DOAA, DMAS, DMAM, DMAG, DMAA; Diacyl-alkanoic acids, e.g. DOP, DOB, DOS, DOM, DOG, DOA, DMP, DOB, DMS, DMM, DMG, DMA; Chems and derivatives thereof, e.g. Chol-C2, Chol-C3, Chol-C5, Chol-C6, Chol-C7 or Chol-C8; Chol-C1, CholC3N or Cholesterolhemidicarboxylic acids and Cholesteryloxycarbonylaminocarboxylic acids, e.g. Chol-C12 or CholC13N, fatty acids, e.g. Oleic acid, Myristic Acid, Palmitic acid, Stearic acid, Nervonic Acid, Behenic Acid; DOPA, DMPA, DPPA, POPA, DSPA, Chol-SO4, DOPG, DMPG, DPPG, POPG, DSPG or DOPS, DMPS, DPPS, POPS, DSPS or Cetyl-phosphate.
Said cationic lipids may be selected from, but are not limited to, the group consisting of consisting of DOTAP, DMTAP, DPTAP, DSTAP, POTAP, DODAP, PODAP, DMDAP, DPDAP, DSDAP, DODMHEAP or DORI, PODMHEAP or PORI, DMDMHEAP or DMRI, DPDMHEAP or DPRI, DSDMHEAP or DSRI, DOMDHEAP, POMDHEAP, DMMDHEAP, DPMDHEAP, DSMDHEAP, DOMHEAP, POMHEAP, DMMHEAP, DPMHEAP, DSMHEAP, DODHEAP, PODHEAP, DMDHEAP, DPDHEAP, DSDHEAP, DDAB, DODAC, DOEPC, DMEPC, DPEPC, DSEPC, POEPC, DORIE, DMRIE, DOMCAP, DOMGME, DOP5P, DOP6P, DC-Chol, TC-Chol, DAC-Chol, Chol-Betaine, N-methyl-PipChol, CTAB, DOTMA, MoChol, HisChol, Chim, MoC3Chol, Chol-C3N-Mo3, Chol-C3N-Mo2, Chol-C4N-Mo2, Chol-DMC3N-Mo2, CholC4Hex-Mo2, DmC4Mo2, DmC3Mo2, C3Mo2, C3Mo3, C5Mo2, C6Mo2, C8Mo2, C4Mo4, PipC2-Chol, MoC2Chol, PyrroC2Chol, ImC3Chol, PyC2Chol, MoDO, MoDP, DOIM or DPIM.
In addition or alternatively the inventive amphoteric liposomes may comprise one or more compounds with Cpd. No. 1-97 listed in tables 59 and 60 of this disclosure.
In one embodiment of the invention the amphoteric liposomes are an amphoter I mixture and κ(min) of said mixtures is between 0.07 and 0.22, preferably between 0.09 and 0.15.
In another embodiment of the invention the amphoteric liposomes are an amphoter II mixture and κ(min) of these mixtures is less 0.23, preferably less than 0.18.
In another aspect of the invention, the liposome may comprise a lipid mixture other than one having the following specific combination of amphiphiles: DC-Chol/DOPA/Chol 40:20:40 (molar ratio).
In still other aspects of the invention the amphoteric liposome may be other than one comprising a mixture of cholesterol and phosphatidylcholine in a molar amount of 50 mol % or more.
In another particular aspect of the present invention, the amphoteric liposomes encapsulate at least one active agent. Said active agent may comprise a drug. In some embodiments said active agent may comprises a nucleic acid.
Without being limited to such use, the amphoteric liposomes described in the present invention are well suited for use as carriers for nucleic acid-based drugs such for example as oligonucleotides, polynucleotides and DNA plasmids. These drugs are classified into nucleic acids that encode one or more specific sequences for proteins, polypeptides or RNAs and into oligonucleotides that can specifically regulate protein expression levels or affect the protein structure through inter alia interference with splicing and artificial truncation.
In some embodiments of the present invention, therefore, the nucleic acid-based therapeutic may comprise a nucleic acid that is capable of being transcribed in a vertebrate cell into one or more RNAs, which RNAs may be mRNAs, shRNAs, miRNAs or ribozymes, wherein such mRNAs code for one or more proteins or polypeptides. Such nucleic acid therapeutics may be circular DNA plasmids, linear DNA constructs, like MIDGE vectors (Minimalistic Immunogenically Defined Gene Expression) as disclosed in WO 98/21322 or DE 19753182, or mRNAs ready for translation (e.g., EP 1392341).
In another embodiment of the invention, oligonucleotides may be used that can target existing intracellular nucleic acids or proteins. Said nucleic acids may code for a specific gene, such that said oligonucleotide is adapted to attenuate or modulate transcription, modify the processing of the transcript or otherwise interfere with the expression of the protein. The term “target nucleic acid” encompasses DNA encoding a specific gene, as well as all RNAs derived from such DNA, being pre-mRNA or mRNA. A specific hybridisation between the target nucleic acid and one or more oligonucleotides directed against such sequences may result in an inhibition or modulation of protein expression. To achieve such specific targeting, the oligonucleotide should suitably comprise a continuous stretch of nucleotides that is substantially complementary to the sequence of the target nucleic acid.
Oligonucleotides fulfilling the abovementioned criteria may be built with a number of different chemistries and topologies. The oligonucleotides may comprise naturally occurring or modified nucleosides comprising but not limited to DNA, RNA, locked nucleic acids (LNA's), 2′O-methyl RNA (2′Ome), 2′ O-methoxyethyl RNA (2′MOE) in their phosphate or phosphothioate forms or Morpholinos or peptide nucleic acids (PNA's). Oligonucleotides may be single stranded or double stranded.
Oligonucleotides are polyanionic structures having 8-60 charges. In most cases these structures are polymers comprising nucleotides. The present invention is not limited to a particular mechanism of action of the oligonucleotides and an understanding of the mechanism is not necessary to practice the present invention.
The mechanisms of action of oligonucleotides may vary and might comprise inter alia effects on splicing, transcription, nuclear-cytoplasmic transport and translation.
In a preferred embodiment of the invention single stranded oligonucleotides may be used, including, but not limited to DNA-based oligonucleotides, locked nucleic acids, 2′-modified oligonucleotides and others, commonly known as antisense oligonucleotides. Backbone or base or sugar modifications may include, but are not limited to, Phosphothioate DNA (PTO), 2′O-methyl RNA (2′Ome), 2′Fluoro RNA (2′F), 2′ O-methoxyethyl-RNA (2′MOE), peptide nucleic acids (PNA), N3′-P5′ phosphoamidates (NP), 2′ fluoroarabino nucleic acids (FANA), locked nucleic acids (LNA), Morpholine phosphoamidate (Morpholino), Cyclohexene nucleic acid (CeNA), tricyclo-DNA (tcDNA) and others. Moreover, mixed chemistries are known in the art, being constructed from more than a single nucleotide species as copolymers, block-copolymers or gapmers or in other arrangements.
In addition to the aforementioned oligonucleotides, protein expression can also be inhibited using double stranded RNA molecules containing the complementary sequence motifs. Such RNA molecules are known as siRNA molecules in the art (e.g., WO 99/32619 or WO 02/055693). Other siRNAs comprise single stranded siRNAs or double stranded siRNAs having one non-continuous strand. Again, various chemistries were adapted to this class of oligonucleotides. Also, DNA/RNA hybrid systems are known in the art.
In another embodiment of the present invention, decoy oligonucleotides can be used. These double stranded DNA molecules and chemical modifications thereof do not target nucleic acids but transcription factors. This means that decoy oligonucleotides bind sequence-specific DNA-binding proteins and interfere with the transcription (e.g., Cho-Chung, et al. in Curr. Opin. Mol. Ther., 1999).
In a further embodiment of the invention oligonucleotides that may influence transcription by hybridizing under physiological conditions to the promoter region of a gene may be used. Again various chemistries may adapt to this class of oligonucleotides.
In a still further alternative of the invention, DNAzymes may be used. DNAzymes are single-stranded oligonucleotides and chemical modifications thereof with enzymatic activity. Typical DNAzymes, known as the “10-23” model, are capable of cleaving single-stranded RNA at specific sites under physiological conditions. The 10-23 model of DNAzymes has a catalytic domain of 15 highly conserved deoxyribonucleotides, flanked by 2 substrate-recognition domains complementary to a target sequence on the RNA. Cleavage of the target mRNAs may result in their destruction and the DNAzymes recycle and cleave multiple substrates.
In yet another embodiment of the invention, ribozymes can be used. Ribozymes are single-stranded oligoribonucleotides and chemical modifications thereof with enzymatic activity. They can be operationally divided into two components, a conserved stem-loop structure forming the catalytic core and flanking sequences which are reverse complementary to sequences surrounding the target site in a given RNA transcript. Flanking sequences may confer specificity and may generally constitute 14-16 nt in total, extending on both sides of the target site selected.
In a still further embodiment of the invention aptamers may be used to target proteins. Aptamers are macromolecules composed of nucleic acids, such as RNA or DNA, and chemical modifications thereof that bind tightly to a specific molecular target and are typically 15-60 nt long. The chain of nucleotides may form intramolecular interactions that fold the molecule into a complex three-dimensional shape. The shape of the aptamer allows it to bind tightly against the surface of its target molecule including but not limited to acidic proteins, basic proteins, membrane proteins, transcription factors and enzymes. Binding of aptamer molecules may influence the function of a target molecule.
All of the above-mentioned oligonucleotides may vary in length between as little as 5 or 10, preferably 15 and even more preferably 18, and 50, preferably 30 and more preferably 25, nucleotides per strand. More specifically, the oligonucleotides may be antisense oligonucleotides of 8 to 50 nucleotides length that catalyze RNAseH mediated degradation of their target sequence or block translation or re-direct splicing or act as antogomirs; they may be siRNAs of 15 to 30 basepairs length; they may further represent decoy oligonucleotides of 15 to 30 basepairs length; can be complementary oligonucleotides influencing the transcription of genomic DNA of 15 to 30 nucleotides length; they might further represent DNAzymes of 25 to 50 nucleotides length or ribozymes of 25 to 50 nucleotides length or aptamers of 15 to 60 nucleotides length. Such subclasses of oligonucleotides are often functionally defined and can be identical or different or share some, but not all features of their chemical nature or architecture without substantially affecting the teachings of this invention. The fit between the oligonucleotide and the target sequence is preferably perfect with each base of the oligonucleotide forming a base pair with its complementary base on the target nucleic acid over a continuous stretch of the abovementioned number of oligonucleotides. The pair of sequences may contain one or more mismatches within the said continuous stretch of base pairs, although this is less preferred. In general the type and chemical composition of such nucleic acids is of little impact for the performance of the inventive liposomes as vehicles be it in vivo or in vitro and the skilled artisan may find other types of oligonucleotides or nucleic acids suitable for combination with the inventive amphoteric liposomes.
In one aspect the amphoteric liposomes according to the present invention are useful to transfect cells in vitro, in vivo or ex vivo.
In another aspect of the invention the amphoteric liposomes according to the invention may comprise cell targeting ligands on the surface which bind to a target receptor of the cell surface. Ligands may include, but are not limited to, antibodies or their fragments, sugars, hormones, vitamins, peptides, such as arg-gly-asp (RGD), growth factors, bilirubin, transferrin, folate or other components.
In still other aspects of the invention the amphoteric liposomes may comprise membrane forming or membrane situated molecules which sterically stabilize the particles. Such molecules are known in the art and include amphipathic dextranes, polysialic acids, hydroxyethyl starches, hyaluronic acids, polyethylenglycols, Tween 80 or GM1 gangliosides (e.g. Woodle et al., Biochim. Biophys. Acta, 1113(2), 171-179, (1992); Allen et al., Biochim. Biophys. Acta, 981(1), 27-35, (1989)), without being limited to said substances. The abovementioned molecules are of amphipathic character and comprise at least one hydrophilic domain that can be selected from the moieties above and further comprise at least one hydrophobic domain, which is very often a lipid, one or more alkyl chains comprising 12 or more carbon atoms or one or more acyl chains comprising 12 or more carbon atoms. Amphipathic molecules that are most frequently used comprise DSPE-mPEG, DMPE-mPEG and polyethylenglycols coupled to ceramides having an N-acyl chain length between 8 and 24 carbon atoms. It is known to the skilled artisan that the size of the hydrophobic portion is related to the diffusion time of these sterically shielding moieties, as demonstrated in (Mok, K. W. et al. (1999). Biochim. Biophys. Acta 1419, 137-150; Silvius, J. R. and Zuckermann, M. J. (1993). Biochemistry 32, 3153-3161.; Webb, M. S. et al. (1998). Biochim. Biophys. Acta 1372, 272-282; Wheeler, J. J. et al. (1999). Gene Ther. 6, 271-281; Zhang, Y. P. et al. (1999). Gene Ther. 6, 1438-1447). The steric shielding may therefore be of constant or transient nature within the limits of the circulation time of such particles in a vertebrate or mammal. Also, said sterically stabilizing polymers may be grafted to both the exofacial and endofacial side of the lipid bilayer or may be limited to only the exofacial side. This can be achieved through different techniques of insertion of said moieties, as demonstrated in (Shi F et al. (2002), Biochemical Journal 366:333-341).
Amongst other effects steric stabilizers minimize the uptake of the particles by the RES (reticuloendothelial system) upon injection of the particles into the blood stream.
Amphoteric liposomes comprising cell targeting ligands and molecules which sterically stabilize the particles are also within the scope of the present invention. Drug delivery systems comprising both ligands and molecules which sterically stabilize are known in the art, e.g. Hu-Lieskovan et al., Cancer Res., 65(19), 8984-8992, (2005) or Schiffelers et al., Nucleic Acid Research, 32(19), (2004).
A further aspect of the invention relates to pharmaceutical compositions comprising the inventive amphoteric liposomes as a carrier for the delivery or targeted delivery of active agents or ingredients, including drugs such as nucleic acid drugs, e.g., oligonucleotides and plasmids. The pharmaceutical composition of the present invention may be formulated in a suitable pharmacologically acceptable vehicle. Vehicles such as water, saline, phosphate buffered saline and the like are well known to those skilled in the art for this purpose.
In some embodiments said pharmaceutical compositions may be used for the treatment or prophylaxis of inflammatory, immune or autoimmune disorders, cancer and/or metabolic diseases of humans or non-human animals.
A yet further aspect of the present invention relates to methods for the treatment of human or non-human animals in which said pharmaceutical composition comprising the inventive amphoteric liposomes as a carrier for active agents or ingredients is targeted to a specific organ or organs, tumours or sites of infection or inflammation.
a and 10b show plots of the intensity of fusion (expressed as % ΣFRET in the matrix C/A=0.17-0.75 for DOTAP/DMGS; C/A=0.33-3 for MoChol/DOGS vs. pH) for liposomes from DOTAP/DMGS or MoChol/DOGS against κ(min) for mixtures with 0%-50% POPC. The reference κ(min) was modelled for C/A=0.66 (DOTAP/DMGS) or C/A=1(MoChol/DOGS). The % ΣFRET for 0% POPC is set to 100.
a and 11b show plots of the intensity of fusion (expressed as % ΣFRET in the matrix C/A=0.17-0.75 for DOTAP/DMGS; C/A=0.33-3 for MoChol/DOGS vs. pH) for liposomes from DOTAP/DMGS or MoChol/DOGS against κ(min) for mixtures with 0%-50% DOPE. The reference κ(min) was modelled for C/A=0.66 (DOTAP/DMGS) or C/A=1(MoChol/DOGS). The % ΣFRET for 0% DOPE is set to 100.
a and 12b show plots of the intensity of fusion (expressed as % ΣFRET in the matrix C/A=0.17-0.75 for DOTAP/DMGS; C/A=0.33-3 for MoChol/DOGS vs. pH) for liposomes from DOTAP/DMGS or MoChol/DOGS against κ(min) for mixtures with 0%-50% cholesterol. The reference κ(min) was modelled for C/A=0.66 (DOTAP/DMGS) or C/A=1(MoChol/DOGS). The % ΣFRET for 0% cholesterol is set to 100.
a and 13b show plots of the intensity of fusion (expressed as % ΣFRET in the matrix C/A=0.17-0.75 for DOTAP/DMGS; C/A=0.33-3 for MoChol/DOGS vs. pH) for liposomes from DOTAP/DMGS or MoChol/DOGS against κ(min) for mixtures with 0%-50% of a mixture POPC/cholesterol 1:1. The reference κ(min) was modelled for C/A=0.66 (DOTAP/DMGS) or C/A=1(MoChol/DOGS). The % ΣFRET for 0% POPC/cholesterol is set to 100.
By “chargeable” is meant that the amphiphile has a pK in the range pH 4 to pH 8. A chargeable amphiphile may therefore be a weak acid or base. A “stable” amphiphile is a strong acid or base, having a substantially stable charge on the range pH 4 to pH 8.
By “amphoteric” herein is meant a substance, a mixture of substances or a supra-molecular complex (e.g., a liposome) comprising charged groups of both anionic and cationic character wherein:
As a result the substance or mixture of substances has an isoelectric point of neutral net charge between pH 4 and pH 8. Amphoteric character is by this definition different from zwitterionic character, as zwitterions do not have a pK in the range mentioned above. In consequence, zwitterions are essentially neutrally charged over a range of pH values; phosphatidylcholines and phosphatidylethanolamines are neutral lipids with zwitterionic character.
By “C/A” or “C/A ratio” or “C/A molar ratio” herein is meant the molar ratio of cationic amphiphiles to anionic amphiphiles in a mixture of amphiphiles.
By “κ(min)” herein is meant the minimum of the function κtotal(pH)
By “κ(neutral)” herein is meant the κ value of a neutral or zwitterionic lipid or mixtures thereof.
By “IC50” herein is meant the inhibitory concentration of an oligonucleotide leading to a 50% knockdown of a target mRNA or in case of a proliferation assay to a 50% inhibition of cell viability.
The following list of lipids includes specific examples of neutral, zwitterionic, anionic, cationic or amphoteric lipids. The lipid list by no means limits the scope of this disclosure.
The abbreviations for the lipids are used herein, the majority of which abbreviations are in standard use in the literature:
Any dialkyl derivatives of the neutral or zwitterionic lipids comprising diacyl groups listed above are also within the scope of the present invention.
wherein Z is C or —NH— and n is any of between 1 and 29.
POGS or POG-Succ 1-Palmitoyl-2-oleoylglycerol-hemisuccinate
Any dialkyl derivatives of the anionic lipids comprising diacyl groups listed above are also within the scope of the present invention.
Cationic lipids:
e.g.
e.g.
DODMHEAP or DORI 1,2-Dioleoyl-3-dimethylhydroxyethyl-ammonium-Propane
e.g.
e.g.
e.g.
e.g.
e.g.
Any dialkyl derivatives of the cationic lipids comprising diacyl groups listed above are also within the scope of the present invention.
Any dialkyl derivatives of the amphoteric lipids comprising diacyl groups listed above are also within the scope of the present invention.
One aspect of the invention relates to lipids which may be useful to prepare liposomes, especially amphoteric liposomes. In one embodiment of this aspect the lipids have the following general formula:
wherein R1 and R2 are independently C8-C30 alkyl or acyl chains with 0, 1 or 2 ethylenically unsaturated bonds or one of R1 or R2 may be H and wherein R3 is a non-branched, branched or cyclic alkyl, alkenyl, alkylene or alkynyl or an aryl group with 1 to 8 C-atoms, optionally substituted with —OH and wherein R4 is selected from one of the following structures:
wherein X and Y1 and Y2 are independently non-branched, branched or cyclic alkyl, alkenyl; alkylene or alkynyl or a aryl group with 1 to 8 C-atoms, optionally substituted with —OH or Y2 may be H.
Chemical representations of this class of lipids may include, but are not limited to:
R1 and R2 are independently C8-C30 acyl chains with 0, 1 or 2 ethylenically unsaturated bonds or one of R1 or R2 may be H.
Specific lipids of said class of lipids include for example 1,2-Dioleoyl-3-methyl-(methoxycarbonyl-ethyl)ammonium-Propane (DOMCAP) or 1,2-Dioleoyl-3-methyl-(methoxycarbonyl-methyl)ammonium-Propane (DOMGME).
In another embodiment of this aspect the lipids may have one of the following general formula:
wherein R1 and R2 are independently C8-C30 alkyl or acyl chains with 0, 1 or 2 ethylenically unsaturated bonds or one of R1 or R2 may be H.
Specific lipids of said classes of lipids are for example 1,2-Dioleoyl-3-N-pyrrolidine-propane (DOP5P) or 1,2-Dioleoyl-3-N-pyrridinium-propane, bromide salt (DOP6P).
Lipid shape theory is built on a shape balance between the hydrophobic part and the polar head-group of a given amphiphile rather than on absolute values for the two molecular portions. In accordance with the present invention, κ is the volume ratio between the polar and apolar section of a lipid.
κ=molecular volume(head)/molecular volume(tail)
Various different ways are available to those skilled in the art to calculate molecular volumes and alternative methods and sources are discussed for example in Connolly, M. J. Am. Chem. Soc. (1985) 107, 1118-1124 and the references therein or are given at: http://www.ccl.net/cca/documents/molecular-modeling/node5.html
Molecular volume is commonly calculated by assigning a value called a van der Waals radius, rivdW, to each atom type in such a way that the sum of these quantities for a given atom pair, i and j, is equal to their closest possible distance (dij):
r
i
vdW
+r
j
vdW
≦dij
Many different tables of “best” van der Waals radii exist, even though the values for corresponding atoms coming from different authors are similar. In geometric terms, the van der Waals radius may be imagined as a spherical “shield” surrounding the atom, and the closest distance between two non-bonded atoms is when their respective shields touch. However, the shields of covalently bonded atoms intersect since bond lengths are shorter than the sum of the van der Waals radii partaking atoms. A molecular van der Waals surface, also called a van der Waals envelope, is composed of the spheres for individual atoms with their intersecting sections removed.
For a single molecule (i.e., molecule for which there is a path between any two atoms along covalent bonds), the van der Waals envelope is a closed surface, and hence, it contains volume. This volume is called the molecular volume, or van der Waals volume and is usually given in Å3. The straightforward way of calculating molecular volume on a computer is by numerical integration.
In some embodiments, molecular volumes for lipid molecules and the respective head and tail fragments may be calculated using DS Viewer Pro 5.0 (Accelrys Inc., San Diego, Calif.) and volumes within the respective van der Waals radii were calculated.
Typical membrane fragments are 1,2-diacyl-ethyleneglycols that represent the hydrophobic section for common phospholipids, leaving the 3′ carbon atom of the original glycerol with the phosphocholine head-group. The same fragment is also found in the common cationic lipid DOTAP and its derivatives but also in diacylglycerols with other polar head-groups such as dimyristoylglycerol hemisuccinate and the like.
For the cholesterol derivatives, the entire sterol, but not the 3′ oxygene, is defined as the hydrophobic section and the head-group being complementary to that.
Likewise, for cationic or anionic alkyl derivatives the polar head-group is defined as the polar fragment involving the C1 carbon of the alkyl chain. Consequently, the residual chain with n−1 carbon atoms represents the hydrophobic apolar part.
Molecular volumes depend on the constants used for the calculations and may be affected by the conformation of the molecule. Typical values obtained for the hydrophobic apolar fragments are and were used for further calculations:
Molecular volumes for most counter-anions were derived the same way, but for Na+ or K+ the strongly bound hydration sphere is taken into account. The following values were used for further calculations:
164 2)
1) Gerald H. Pollack: Cells, Gels and the Engines of Life, Ebner and Sons Publishers, 2001
2) http://www.bbc.co.uk/dna/h2g2/A1002709#footnote1
The charged polar head-groups have different representations and the molecular volumes are given below in this description in tables 59, 60 and 61 for some individual members of this group.
It is possible to use other methods to determine molecular volumes for the lipids. Also, some parameters such as the exact split-point between membrane tail and polar head; number of water molecules in the hydration cage or the van der Waals radii can be varied without affecting the general applicability of the model. With the same understanding more subtle changes in the molecular volumes may be disregarded, in particular those arising from the dissociation of protons or from conformational changes. In some embodiments the molecular volumes recited in Tables 1, 2, 3, 59, 60 and 61 may be used in the present invention.
The counterions fall into the same category of sizes than the actual polar head-groups. As such, it has been found that the addition or withdrawal of counterions from lipid polar regions has a substantial effect on the total head-group size and in consequence on the head/tail balance κ. As an example, the CHEMS sodium salt has a head-group size of 141 Å3 which is reduced to 76 Å3 in the undissociated form at pH 4. κ varies between 0.42 and 0.23, respectively. CHEMS does form a lamellar phase at pH 7.5 and higher but adopts a hexagonal phase at low pH.
Other lipids with known phase behaviour can be used to select κ values for discrimination between the lamellar and hexagonal phase; an example is given in Table 4 below. PE head-groups can form an intramolecular ring structure with hydrogen bonding between the terminal amino group and the oxygen in the phosphoester group (betaine structure) (e.g. Pohle et al., J. Mol. Struct., 408/409, (1997), 273-277). PC head-groups are sterically hindered and instead recruit counterions to their respective charged groups.
In a first model no lipid salt formation occurs between charged anionic and cationic lipids. This reflects the assumptions of Li and Schick (Biophys. J., 2001, 80, 1703-1711) and might be the case for lipids that are sterically hindered to form lipid salts (independent ion model).
The lipid species in the membrane comprise undissociated anions and cations as well as the dissociated anions and cations, the latter being complexed with their respective counterions. The K value for such a mixture is assumed to be the weighted sum of its components:
κ=κ(anion0)*c(anion0)+κ(cation0)*c(cation0)+κ(anion−)*c(anion−)+κ(cation+)*c(cation+); (1)
wherein anion0 or cation0 denotes the uncharged species and anion− or cation+ denotes the respective charged species; and wherein c herein denotes concentration.
The amounts of the individual species present under such assumption can be calculated from known equilibrium constants K for the acid or base dissociation:
c(anion−)=c(aniontot)/(cH+/K+1) (2)
c(anion0)=c(aniontot)−c(anion−) (3)
c(cation+)=c(cationtot)/(K/cH++1) (4)
c(cation0)=c(cationtot)−c(cation+); (5)
wherein anion0 is the undissociated anion, anion− the negatively charged molecule and aniontot the total concentration of the respective anion. Cations follow the same nomenclature and cH+ and K describe the proton concentration and the equilibrium constant for the acid or base, respectively.
However, taking possible interaction between a cationic and anionic amphiphile into account the lipid salt occurs as a fifth species in the mixture:
κ=κ(anion0)*c(anion0)+κ(cation0)*c(cation0)+κ(anion−)*c(anion−)+κ(cation+)*c(cation+)+κ(salt)*c(salt)
In a lipid salt, the cationic amphiphile serves as a counterion to the anionic amphiphile and vice versa thus displacing the small counterions like sodium or phosphate from the head-group. The lipid salt is net uncharged and its geometry has to be assumed to be the sum of both parts without the small counterions. Therefore:
κ(salt)=(vhead(cation)+vhead(anion))/(vapolar(cation)+vapolar(anion)) (7)
Salt formation is limited by the charged amphiphile that is present in the lowest concentration:
c(salt)=MIN(c(cation+);c(anion−))
Salt formation between the two charged amphiphiles is assumed to be complete within this model, but of course, an incomplete salt formation may be assumed. The following calculations further reflect the fact that the salt comprises two lipid molecules. It is of course possible to assume further some membrane contraction upon lipid salt formation and to put a different weight on the contribution of k(salt).
To achieve amphoteric character of a lipid mix, at least one of the lipid ions needs to be a pH-sensitive, weak acid or base (“chargeable”). A detailed disclosure is found in WO 02/066012 the contents of which are incorporated herein by reference. Being different in character, three basic systems are possible and are analysed here:
a. Amphoter I Systems
Amphoter I systems need an excess of the pH-sensitive anion to achieve amphoteric character. At pH 7 to 8 the anionic lipid is fully charged and salt formation occurs until all cationic lipids are consumed. In an example with 70 mol. % anionic lipid and 30 mol. % cationic lipid, all cationic lipid and a corresponding 30 mol. % of the anionic lipid would exist as lipid salt while 40 mol. % of the anionic lipid is unbound and recruits its counterion to the head-group.
Starting from neutral conditions, a reduction of the pH discharges the anionic lipid, the κ value becomes smaller owing to loss of the counterion and reaches a minimum when the portion of still-charged anionic lipid is equal to the amount of cationic lipid. Therefore, κ is minimal at the isoelectric point of the amphoteric lipid mixture. If the pH is further lowered, an increasingly smaller portion of the anionic lipid remains charged. This means dissociation of the lipid salt and recruitment of counterions, now to the cationic lipid liberated from the lipid salt.
The left panel in
Amphoter I mixtures with less than 50 mol. % anionic lipid are no longer amphoteric since the anion can modulate, but not overcompensate, the charge on the cationic lipid. These mixtures might undergo a pH-dependent fusion, but do not provide a second stable phase at low pH. A 1:1 complex adopts a lamellar phase only at low pH and undergoes fusion at neutrality.
The parameters used for the calculations illustrated in
b. Amphoter II Systems
Amphoter II systems have the distinct advantage to be amphoteric over the entire range of anion: cation ratios and no charge overcompensation for the strong ion is needed as in Amphoter I or Amphoter III systems. A calculation for a model system is shown in
The parameters used for the calculation are given in Table 6 below; all volumes in Å3.
Again, the lipid salt model predicts stable states at neutral to slightly alkaline pH but also at slightly acidic pH and a pronounced valley of instability or fusogenicity in between.
In contrast to amphoter I systems, fusogenic states can be reached across a wide range of different lipid ratios between the anionic and cationic components. That is, the valley of fusogenicity extends across a wider range of anion/cation ratios, allowing a greater degree of control over the pH at which a given system is fusogenic.
c. Amphoter III Mixtures
Amphoter III mixtures comprising a stable anion and a pH-sensitive cation cannot form lipid salts at neutral pH, since little to no charged cationic lipid exists at this pH. It needs ongoing acidification to first create the cation which then may undergo salt formation. Calculation for a model system is shown in
The parameters used for the calculation are given in Table 7 below; all volumes in Å3.
As can be seen from
Experimental evidence for the fusion valley is given in the Examples 1 to 4 and provides confirmation for the central hypothesis of lipid salt formation in amphoteric liposomes.
The algorithm described here allows prediction of fusion behaviour of a wide range of amphoteric lipid mixtures. The prediction rules are derived from a simple geometrical description of the interacting lipids and are independent from the actual chemical representation of the molecules. As such, existing and novel lipid combinations can be easily tested by those skilled in the art, and the intended fusion behaviour can be predicted in a rational way. The following key parameters may illustrate such selection process, but other priorities might be set dependent on the respective goals of the application.
κ of the lipid salt is calculated in equation (7) above and may suitably be lower than 0.34 or 0.35 to predict reasonably a fusogenic hexagonal phase. In some embodiments κ may be lower than 0.3; preferably lower than 0.25. κ(salt) is low when the combined polar head-groups are small and the combined hydrophobic portions are large. The preferred sum of head-group volumes is about 300 Å3 or smaller; in a more preferred embodiment this volume is smaller than 220 Å3, and an even more preferred value is smaller than 170 Å3. According to the selection made above, preferred sums for the tail group volumes are larger than 650 Å3 and may be as large as about 1000 Å3, wherein combinations of proper head and tail groups are governed by the preferred κ(salt) values.
Amplitude of Change (d(κ)/d(pH))
A lipid salt with a low value for κ may be stabilised below or above its isoelectric point by recruitment of counterions. In a preferred embodiment of the invention larger counterions are used to stabilise either the cationic or the anionic state of the amphoteric lipid mixture.
It becomes apparent from the right panel of
In some embodiments of the present invention larger counter-cations are used to stabilise the amphoteric liposomes at neutral conditions. In a preferred embodiment such counter-cations have a molecular volume of 50 Å3 or more, in a more preferred embodiment this volume exceeds 75 Å3 and said neutral pH is between pH 7 and pH 8, more preferred about the physiological pH of 7.4.
If amphoteric liposomes are produced for pharmaceutical purposes, compatibility of the used ions with the application route needs to be obeyed. Suitable counter-cations can be selected from Table 2 above describing the ion sizes. Preferred counter-cations for pharmaceutical compositions are sodium or the respective ionized forms of tris(hydroxymethyl)aminomethan, tris-hydroxyethylaminomethan, triethylamine, arginine, in particular L-arginine and the like.
In an embodiment of the invention the amphoteric liposomes may be manufactured at a low pH in their cationic state. Under these conditions, the liposomes can bind polyanions such as proteins, peptides or nucleic acids, whether as large plasmids or smaller oligonucleotides. Such binding is useful for improvement of the encapsulation efficacy of said materials into the amphoteric liposomes.
It is advantageous to use a lipid phase with a low κ at acidic pH. Selection of large counter-anions facilitates stabilisation of said lipid phase, e.g., for the production of such liposomes and the encapsulation of cargo under these conditions.
Suitable large counter-anions have a molecular volume larger than 50 Å3, preferred large counterions have a molecular volume larger than 75 Å3. Suitable counter-anions can be selected from Table 2 above. Preferred counter-anions are citrate, pyrophosphate, barbiturate, methyl sulphate and the like.
After having contacted the lipid phase with the cargo to be encapsulated under acidic conditions, the liposomes are then neutralized and non-encapsulated cargo can optionally be removed. Typically, non-encapsulated cargo detaches from the lipid membrane since both carry the same charge under neutral conditions. The amphoteric liposomes are negatively charged above their isoelectric point, e.g., at a pH between 7 and 8 and the cargo molecules exist as polyanions at such a pH. This is in particular the case with nucleic acids that carry one negative charge per nucleobase. Such liposomes can undergo effective destabilisation when exposed to the low pH in combination with a smaller counter-anion. This is for example the case after systemic administration and cellular uptake and endocytosis of such liposomes. Chloride or phosphate are the most common counter-anions in the body fluids of animals, be it any animal, a mammal or humans. Phosphate, but even more so chloride, are small counterions with little or no hydration shell and molecular volumes <60 Å3.
A mathematical description for the isoelectric point of amphoteric liposomes is been given in the WO 02/066012. The isoelectric point of the amphoteric liposomes can be adjusted to a wide range of conditions, and there is sufficient chemical representation for individual lipids with different pK dissociation constants that allows the skilled artisan to select useful components and combinations for the making of amphoteric liposomes. In addition, the isoelectric point for a given amphoteric lipid composition can be easily tuned through the molar ratio between the anionic and the cationic lipid as presented in Hafez et al., Biophys. J., 79, (2000), 1438-1446.
It has been found that the transfection efficiency of the inventive amphoteric liposomes depends on the isoelectric point of the amphoteric lipid mixtures. This is demonstrated in
In one embodiment of the present invention the isoelectric point of the inventive amphoteric liposomes is between 4 and 7, preferably between 4.5 and 6.5 and most preferred between 5 and 6.
The algorithm presented above provides structure-activity relationships between lipid chemistry and stability of the resulting membrane, in particular in response to the pH of the environment. Experimental data further illustrate this relationship and justify the model predictions (e.g. Examples 2, 3, 4 and corresponding
The data provided above show a high degree of predictability from model calculations. The algorithm, starting from molecular volume considerations and rather long range interactions of electrical charges, does not reflect steric fit or misfit of the components; it also does not take phase transition temperatures and the associated molecular movements into account which might occur in isolated cases.
The quantitative structure-activity relationships taught by the algorithm described above facilitate in silico screening and support rational selection and optimization. Such screening may be used on its own or in combination with empirical verification, e.g., by the inclusion of selected data points within a series of lipid homologues or use of experimental parameters.
The algorithm enables the selection of amphoteric liposomes for a number of technical purposes. A more detailed analysis is given below of the use of such amphoteric liposomes in pharmaceutical applications. Amongst such pharmaceutical applications, parenteral administration and direct administration into the blood stream of a human or non-human animal, preferably a mammal is of particular importance. Amphoteric liposomes have specific applicability inter alia in the intracellular delivery of cargo molecules. As described above, during uptake into the cells, liposomes are exposed to an acidic environment in the endosome or lysosome of cells. Destabilisation of the lipid phase, e.g., by enhanced fusogenicity is known to facilitate endosome escape and intracellular delivery. It is possible that other environments of low pH will also trigger said fusion, e.g., the low pH conditions found in tumors or at sites of inflammation.
Amphoteric liposomes with a preferred low value of κ(salt) have been found to respond advantageously to acidification by destabilisation or formation of a fusogenic phase as intended.
The difference between κ(salt) and κ(total) for acidic conditions is of less importance, since an unstable lipid phase under acidic conditions does not interfere with cellular uptake. In addition, methods to stabilise such lipid phase for production have been described above.
The analysis is sensitive to counter-cation size and the proportion of anionic lipid in the mixture. As mentioned above, larger counter-cations make the selection less stringent, since this parameter directly improves the dκ(pH8) which means that systems with a low amplitude become more functional. Although resulting in a more or less stringent selection, the counter-cation size does not change the observed overall pattern of selected systems. This fact effectively compensates the variability of counter-cation sizes that can be found in the literature.
The present invention aims to provide alternative formulations of amphoteric liposomes comprising neutral lipids.
Neutral lipids comprise structures such as phosphatidylcholine, phosphatidylethanolamine, sphingolipids or cholesterol and the like. As these lipids do not have pH responsive elements that would react between pH 3 and 8, no changes in the molecular geometry occur in this range. Depending on the individual K values of the neutral lipids, dilution of the bistable behaviour of the amphoteric lipid pair occurs and the steepness of d(K)/d(pH) becomes smaller, as shown in
The addition of neutral lipids may extend the zone of fusogenic behaviour and to this end neutral lipids with low values of κ may be employed. Such preferred lipids have κ values of 0.3 or less; more preferred lipids have κ values of about 0.2. Typical examples of such lipids are phosphatidylethanolamines. Phosphatidylethanolamines are assumed to form internal salt bridges (betaine structures) between the terminal amino group and the phosphate; therefore no counterions are recruited to the head-groups.
Phosphatidylethanolamines with C14 to C18 alkyl chains are preferred lipids to modulated the fusogenicity of the amphoteric liposomes.
Cholesterol is another example of a lipid having low κ and might therefore extend the fusogenic behaviour of an amphoteric lipid system.
It is of course possible to use mixtures of different neutral lipids to optimize the balance between fusogenicity and stability of such systems.
The algorithm described above facilitates quantitative predictions to be made on the effect of neutral lipid admixtures to amphoteric lipid systems. Such admixtures may result in improved stability of the liposome; they might further result in better resistance against serum proteins or enhanced uptake into cells. Optimization of amphoteric systems is a challenging task on its own, owing to the large number of useful components. This task becomes even more complicated with the addition of further components and rational approaches are urgently needed.
For the in silico screening, amphoteric lipid systems with lipid head-group sizes between 40 and 190 Å3 and lipid hydrophobic tail sizes of 340, 410 or 500 Å3 have been analyzed in the presence of a counter-cation, specifically sodium (65 Å3). The counter-anion is of less relevance for the presented screen, since the ion (i) does not participate in the lipid salt and (ii) does essentially not bind to the membrane at pH8.
For the purpose of this in silico analysis, the parameter k(salt) is replaced by its functional equivalent k(salt)n. Likewise, the parameter dk(pH8) is replaced with dk(pH8)n to indicate its use for the analysis of systems comprising neutral lipids.
To be stable under storage conditions or while in the blood stream, a certain difference between κ(total) at neutral pH and κ(salt)n is necessary. In preferred embodiments, such difference, referred to herein as dκ(pH8)n, may be greater than or to equal 0.08. As noted above, κ(salt)n is the dominant predictor for fusogenicity, whereas dκ(pH8)n>=0.08 is a necessary, but not sufficient condition. A scoring of selected systems was done using 1/κ(salt)n as a metric. High values indicate systems with good fusion and sufficient stability amplitude.
The following in silico screens of amphoter I and amphoter II and III systems provide a more general and experimentally unbiased selection of fusogenic amphoteric liposomes further including neutral lipids with low k. The calculations allow one skilled in the art to deduce amphiphiles with preferred head and tail sizes and subsequently to identify improved amphoteric lipid mixtures.
For amphoter I systems, full dissociation of the anionic amphiphile was assumed at pH 8. A library of 324 amphoter I lipid systems having a C/A=0.333 was constructed and preferred lipid systems having κ(salt)n<0.34 and dκ(pH 8)n>=0.08 were selected from the entire population. Fitness of the selected systems is presented as 1/κ(salt)n in the table 11 below for the addition of 30% cholesterol to the library.
indicates data missing or illegible when filed
Systems with the best fitness have small headgroups for the lipid anion and the lipid cation. Large lipid anion tails are restricted by dκ(pH8)n, while the cation tail size has less of an impact.
Addition of a strongly lamellar lipid such as POPC or DOPC results in more stringent selection without qualitative impact on the selection rules presented before.
b. Amphoter II Systems Further Comprising Neutral Lipids
For amphoter II systems, full dissociation of the anionic amphiphile was assumed at pH 8 and essentially no dissociation of the cationic amphiphile was assumed at this pH. Such selections also apply to amphoter III systems, as long as they contain 50% or less of the anionic amphiphile.
Libraries of cation-rich amphoter II or amphoter III systems (C/A=3) were constructed as described previously and highly functional systems were selected using κ(salt)n<0.34 and dκ(pH8)n>0.08 as criteria. Fitness of the selected systems is presented as 1/κ(salt)n in Table 12 below for the addition of 30% cholesterol to the library.
indicates data missing or illegible when filed
The addition of cholesterol results in a selection that is substantially biased towards cationic lipids with large headgroups and this feature is sensitive towards κ(salt)n; smaller values of κ(salt)n shift this optimum towards smaller head groups. Preferred lipid anions have small headgroups.
Again, the addition of a lamellar lipid such as POPC or DOPC results in more stringent selection without qualitative impact on the selection rules presented before.
Libraries of equilibrated amphoter II systems (C/A=1) were also constructed and introduced into the selection scheme in the presence of 30% cholesterol in this the library (table 13).
indicates data missing or illegible when filed
While the corresponding amphoter II library (C/A=1) from mixtures without neutral lipids has numerous positive systems, the addition of 30% cholesterol resulted in a very stringent selection. This is counterintuitive to the addition of a lipid that promotes fusion and illustrates the impact of dκ(pH8)n as a selection criterium. Sensitivity analysis reveals dκ(pH8)n as a very stringent variable and reduction of this value rapidly eliminates the selection pressure.
In this group, the addition of a lamellar lipid such as POPC or DOPC had similar impact than the addition of cholesterol.
Libraries of anion-rich amphoter II systems (C/A=0.33) were also constructed and introduced into the selection scheme in the presence of 30% cholesterol in this the library (table 14).
indicates data missing or illegible when filed
Here, some bias of the positive candidates towards larger anion head groups can be observed. However, this needs to be interpreted carefully since the fusion activity is always improving in the presence of small anionic headgroups.
Addition of lamellar lipids such as POPC or DOPC implies more stringent selection criteria, but do not qualitatively change the pattern of positive candidates.
The fusogenicity of different amphoteric liposome mixtures comprising charged amphiphiles can be investigated using lipid fusion assays, particle growth or other methods known in the art, thereby allowing the identification of preferred mixtures. Lipid mixing can be tested with fluorescence resonance energy transfer (FRET), and experimental details are described in Example 5 wherein the fusion of amphoteric lipid mixtures was monitored within a pH range of between pH 2.5 and pH 7.5.
A further experimental approach for the identification of preferred mixtures of amphoteric liposome formulations includes the transfection of cells using different amphoteric liposome formulations as delivery vehicles, as described in examples 8, 9 and 10. The delivery of active agents, such as nucleic acid active agents, into cells or tissues in vitro and in vivo is still a challenge and there is a need in the art for improved delivery vehicles that are efficient in transfection, safe for pharmaceutical use and easy to manufacture.
The algorithm described before also applies to amphoteric lipid mixtures further comprising neutral lipids and the quantitative impact of such admixtures is shown in Example 6 and corresponding
In practical terms, the presence of neutral lipids in the membrane of amphoteric liposomes has an effect on the fusogenicity of the liposomes and may improve or impair the fusion or the functionality of the liposomes, such as the delivery of active agents into cells and tissues. It is apparent from the algorithm, that the nature of such effect is largely dictated by the relation between κ(salt) of the amphoteric system and κ(neutral), the membrane constant of the neutral lipid or a mixture of neutral lipids. If, for example κ(salt), is higher than κ(neutral), then the addition of such neutral lipids may stimulate fusion or expand the width of the fusion zone. Of course, κ(total) has to reach a certain minimum for this. In some embodiments, such minimum is smaller than 0.34 or 0.35, more preferred smaller than 0.3 and even more preferred such minimum is smaller than 0.25.
Experimental evidence is given in Example 6 and
Cholesterol as neutral lipid has either no effect on the fusogenicity of amphoteric lipid systems or may even lead to an improvement in fusability. A similar behaviour was observed for the lipid DOPE. Cholesterol and phosphatidylethanolamines are neutral or zwitterionic lipids that have κ values below 0.3 and adopt hexagonal phases, whereas the κ value of cholesterol is even lower than that of phosphatidylethanolamine.
For optimising the balance between fusogenicity and stability it may be advantageous to use a mix of neutral or zwitterionic lipids as neutral component in the amphoteric liposomes.
It has also been found that neutral lipids may extend fusability to further C/A ratios as compared to mixture solely of charged amphiphiles. For example, the addition of 40 mol % cholesterol expands the C/A ratio of DOTAP/Chems for fusion to occur from C/A=>0-0.4 to C/A=>0-0.67. Further data can be found in tables 72 and 73 of example 6.
Neutral lipids may also have impact on other characteristics of amphoteric liposomes, such as colloidal stability or stability in body fluids. For example, the use of amphoteric liposomes in pharmaceutical applications requires stability of the liposomes during storage and travelling through the bloodstream.
Example 7 shows that neutral lipids may stabilise amphoteric liposomes. The amphoteric lipid mixture DOTAP/Oleic acid for example is at physiological pH and high C/A ratios colloidal instable and forms aggregates. The addition of certain amounts of e.g. cholesterol as neutral lipid can stabilise these mixture at physiological pH.
One aspect of the invention relates to amphoteric liposomes comprising cholesterol or a mixture of cholesterol with one or more neutral or zwitterionic lipids as neutral lipids.
In one embodiment of this aspect κ(neutral) of said mixture of cholesterol with one or more neutral or zwitterionic lipids is 0.3 or less, preferably less than 0.25, preferably less than 0.2 and most preferred less than 0.15.
In some embodiments of this aspect the amphoteric liposome is other than one comprising a mixture of cholesterol and phosphatidylcholine in a molar amount of 50 mol % or more.
κ(neutral) can be calculated by the following formula:
κ(neutral)=κ(Lipid 1)*c(Lipid 1)+κ(Lipid 2)*c(Lipid 2)+κ(Lipid i)*c(Lipid i)
wherein κ(Lipid) is the κ value of the appropriate neutral or zwitterionic lipid and c(Lipid) is the concentration of said lipid in the mixture of neutral lipids and i is the running variable.
For example, κ(neutral) values for different mixtures of cholesterol with zwitterionic lipids are shown in tables 15-17.
The mixture of cholesterol with one or more neutral or zwitterionic lipids may be selected, but is not limited to, the group consisting of
In a preferred embodiment of the invention, cholesterol or a mixture of cholesterol and phosphatidylethanolamines are present in the amphoteric liposomes as sole neutral lipids, meaning that essentially no neutral lipids with κ(neutral)>0.25 such as phosphatidylcholines are present. Preferably not more than 80 mol %, more preferably not more than 65 mol %, and most preferred not more than 50 mol %, of these lipids are used as sole neutral lipids in the amphoteric liposomes.
It has been found that cholesterol or a mixture of cholesterol and phosphatidylethanolamine can improve the transfection efficiency of amphoteric lipid mixtures as shown in examples 8 and 9.
In one embodiment of the invention the molar ratio of the mixtures of cholesterol and phosphatidylethanolamine is 4 or less, preferably between 4 and 0.25, preferred between 3 and 0.5 and most preferred between 2 and 1.
The membrane tails of said phosphatidylethanolamines may be selected without limitation from the group of C14 to C20 linear saturated or unsaturated acyls or alkyls, which may further comprise methyl side chains such as in phytanoic acid, thereby forming lipids such as DOPE, POPE, DPhyPE, DLinPE, DMPE, DPPE, DSPE or natural equivalents thereof. Mixtures of different phosphatidylethanolamines are also within the scope of the present invention. In a preferred embodiment of the invention the phosphatidylethanolamine is DOPE.
In a further embodiment of the invention a mixture of cholesterol, phosphatidylethanolamines and phosphatidylcholines may be present in the amphoteric liposomes as neutral lipids. Preferably, as indicated in table 17 above, said mixtures include not more than 40 mol % phosphatidylcholines, a zwitterionic lipid component with κ(neutral)>0.25.
In a still further embodiment of the invention a mixture of neutral lipids, such as phosphatidylcholines (PC), sphingomyelins or ceramides and cholesterol (Chol) may be used as neutral lipids components in the amphoteric liposomes.
Preferred are mixtures of phosphatidylcholines and cholesterol. The molar ratio of PC/Chol may be between 4 and 0.25 or between 3 and 0.33. Preferred are molar ratios of PC/Chol between 1.5 and 0.25, more preferred between 1 and 0.25. These neutral lipid mixes may be added to the salt-forming charged lipids in the amount 80 mol % or less or 65 mol % or less, preferred in an amount of 50 mol % or less.
In some embodiments, additions of PC/Chol in a molar amount of less than 50 mol %, preferably less than 40 mol % may be preferred.
In contrast, amphoteric liposome formulations as disclosed in WO 05/094783 of Endert et al. comprise mixtures of cholesterol and PC in either a total amount of more than 50 mol % or with molar ratios of PC/Chol of 2 or more and κ(neutral)>0.3.
The phosphatidylcholines may be selected without limitation from the group POPC, DOPC, DMPC, DPPC, DSPC or natural equivalents thereof, such as soy bean PC or egg-PC. Mixtures of different phosphatidylcholines are also within the scope of the present invention. In a preferred embodiment of the invention the phosphatidylcholine is selected from POPC or DOPC.
It is possible to find other chemical representations of neutral lipids with κ(neutral)<0.25. Diacylglycerols carrying unsubstituted hydroxyls at the glycerol backbone can be considered for use as neutral lipids. However, some of these compounds function as a second messenger and signal into the protein kinase C pathway (Alberts et al.; Molecular Biology of the Cell, 3rd edition (1994, 747ff, Garland Publishing, London), which may limit their use.
For long-chain alcohols such limitations may not apply and linear, saturated or unsaturated alcohols having 14 to 30 C-atoms can for example be used for practicing the invention. Other neutral lipids may include tocopherols, other sterols, neutral or zwitterionic lysolipids, monoacyl- or monoalkylglycerols or dialkylglycerols.
The amphoteric liposomes comprising neutral lipids according to the invention may comprise one or more or a plurality of charged amphiphiles which in combination with one another have amphoteric character, being negatively charged or neutral at pH 7.4 and positively charged at pH 4 or less.
In one embodiment of the invention the amphoteric liposomes comprise an amphoteric lipid which may be selected from, but is not limited to, the group HistChol, HistDG, isoHistSuccDG, Acylcarnosin and HC-Chol.
In another embodiment of the invention the amphoteric liposomes comprise a mixture of charged lipids whereas at least one such charged lipid is pH responsive.
This mixture of charged lipid components may comprise (i) a stable cationic lipid and a pH responsive, chargeable anionic lipid, referred to as amphoter I mixture (ii) a chargeable cationic lipid and a chargeable anionic lipid, referred to as amphoter II mixture or (iii) a stable anionic lipid and a chargeable cationic lipid, referred to as amphoter III mixture.
The amphoteric liposomes according to the present invention may comprise one or more cationic lipids which may be selected from, but are not limited to, the group consisting of DOTAP, DMTAP, DPTAP, DSTAP, POTAP, DODAP, PODAP, DMDAP, DPDAP, DSDAP, DODMHEAP or DORI, PODMHEAP or PORI, DMDMHEAP or DMRI, DPDMHEAP or DPRI, DSDMHEAP or DSRI, DOMDHEAP, POMDHEAP, DMMDHEAP, DPMDHEAP, DSMDHEAP, DOMHEAP, POMHEAP, DMMHEAP, DPMHEAP, DSMHEAP, DODHEAP, PODHEAP, DMDHEAP, DPDHEAP, DSDHEAP, DDAB, DODAC, DOEPC, DMEPC, DPEPC, DSEPC, POEPC, DORIE, DMRIE, DOMCAP, DOMGME, DOP5P, DOP6P, DC-Chol, TC-Chol, DAC-Chol, Chol-Betaine, N-methyl-PipChol, CTAB, DOTMA, MoChol, HisChol, Chim, MoC3Chol, Chol-C3N-Mo3, Chol-C3N-Mo2, Chol-C4N-Mo2, Chol-DMC3N-Mo2, CholC4Hex-Mo2, DmC4Mo2, DmC3Mo2, C3Mo2, C3Mo3, C5Mo2, C6Mo2, C8Mo2, C4Mo4, PipC2-Chol, MoC2Chol, PyrroC2Chol, ImC3Chol, PyC2Chol, MoDO, MoDP, DOIM or DPIM.
In some embodiments the one or more cationic lipid may be selected from the group consisting of DOTAP, DODAP, DODMHEAP or DORI, DDAB, DOEPC, DC-Chol, MoChol, HisChol, Chim, Chol-C3N-Mo2, Chol-C4N-Mo2, MoDO, DOMCAP, DOP5P, DOP6P, DOIM or DPIM.
The amphoteric liposomes according to the present invention may comprise one or more anionic lipids which may be selected from, but are not limited to, the group consisting of diacylglycerolhemisuccinates, e.g. DOGS, DMGS, POGS, DPGS, DSGS; diacylglycerolhemimalonates, e.g. DOGM or DMGM; diacylglycerolhemiglutarates, e.g. DOGG, DMGG; diacylglycerolhemiadipates, e.g. DOGA, DMGA; diacylglycerolhemicyclohexane-1,4-dicarboxylic acids, e.g. DO-cHA, DM-cHA; (2,3-Diacyl-propyl)amino}-oxoalkanoic acids e.g. DOAS, DOAM, DOAG, DOAA, DMAS, DMAM, DMAG, DMAA; Diacyl-alkanoic acids, e.g. DOP, DOB, DOS, DOM, DOG, DOA, DMP, DOB, DMS, DMM, DMG, DMA; Chems and derivatives thereof, e.g. Chol-C2, Chol-C3, Chol-C5, Chol-C6, Chol-C7 or Chol-C8; Chol-C1, CholC3N or Cholesterolhemidicarboxylic acids and
Cholesteryloxycarbonylaminocarboxylic acids, e.g. Chol-C12 or CholC13N, fatty acids, e.g. Oleic acid, Myristic Acid, Palmitic acid, Stearic acid, Nervonic Acid, Behenic Acid; DOPA, DMPA, DPPA, POPA, DSPA, Chol-SO4, DOPG, DMPG, DPPG, POPG, DSPG or DOPS, DMPS, DPPS, POPS, DSPS or Cetyl-phosphate.
In some embodiments the one or more anionic lipid may be selected from the group consisting of DOGS, DMGS, Chems, Chol-C3, Chol-C5, Chol-C6, Chol-C7, Chol-C8, Chol-C1, CholC3N, Chol-C12, CholC13N or other Cholesterolhemidicarboxylic acids or Cholesteryloxycarbonylaminocarboxylic acids.
In addition or alternatively the inventive amphoteric liposomes may comprise one or more compounds with Cpd. No. 1-97 listed in tables 59 and 60.
As mentioned above κ(total) of an amphoteric lipid mixture comprising neutral lipids has to reach a certain minimum κ(min) to allow fusion of the liposomes.
In one embodiment of the invention the amphoteric liposome formulation is an amphoter I mixture and the neutral lipids are cholesterol or mixtures of cholesterol and neutral or zwitterionic lipids such as phosphatidylethanolamine or phosphatidylcholine and κ(min) of these mixtures is between 0.07 and 0.22, preferably between 0.09 and 0.15. This was surprisingly found and means that the transfection efficiency of the inventive amphoter I liposome formulations shows an optimum at a specific range of κ(min)values.
In a further embodiment of the invention amphoter I liposome formulations including cholesterol or mixtures of cholesterol and neutral or zwitterionic lipids such as phosphatidylethanolamine or phosphatidylcholine as neutral lipid components may be selected from the following mixtures:
In another embodiment of the invention the amphoteric liposome formulation is an amphoter II mixture and the neutral lipids are cholesterol or mixtures of cholesterol and neutral or zwitterionic lipids such as phosphatidylethanolamine or phosphatidylcholine and κ(min) of these mixtures is less 0.23, preferably less than 0.18.
In a further embodiment of the invention amphoter II liposome formulations including cholesterol or mixtures of cholesterol and neutral or zwitterionic lipids such as phosphatidylethanolamine or phosphatidylcholine as neutral lipid components may be selected from the following mixtures:
The amphoteric liposomes according to the invention may be manufactured using suitable methods that are known to those skilled in the art. Such methods include, but are not limited to, extrusion through membranes of defined pore size, injection of an alcoholic lipid solution into a water phase containing the cargo to be encapsulated, or high pressure homogenisation.
A solution of the drug (e.g. an oligonucleotide) may be contacted with the lipid phase at a neutral pH, thereby resulting in volume inclusion of a certain percentage of the solution. High concentrations of the lipids, ranging from about 50 mM to about 150 mM, are preferred to achieve substantial encapsulation of the active agent.
Amphoteric liposomes offer the distinct advantage of binding nucleic acids at or below their isoelectric point, thereby concentrating these active agents at the liposome membrane. This process, called advanced loading procedure, is described in more detail in WO 02/066012 the content of which in incorporated herein by reference.
In one embodiment of the invention the amphoteric liposomes may be prepared by using said advanced loading procedure combined with a lipid film extrusion process.
In another embodiment of the invention the amphoteric liposomes may be prepared by using said advanced loading procedure combined with an injection of an alcoholic lipid solution into a water phase containing for example a nucleic acid. This process is described in more detail in WO 07/107,304 (Panzner et al.) the content of which is incorporated herein by reference.
Irrespective of the actual production process used to make the amphoteric liposomes of the invention, in some embodiments, non-encapsulated drug may be removed from the liposomes after the initial production of the liposomes. Again, the technical literature and the references included herein describe such methodology in detail and suitable process steps may include, but are not limited to, size exclusion chromatography, sedimentation, dialysis, ultrafiltration and diafiltration.
However, the removal of any non-encapsulated drug is not required for performance of the invention, and in some embodiments the liposomal formulations may comprise free as well as entrapped drug.
In one aspect of the invention the size of the liposomes may vary between 50 and 1000 nm, preferably between 50 and 500 nm and more preferred between 70 and 250 nm. In other aspects the size of the liposomes may vary between 70 and 150 nm and in still other aspects the size of the liposomes may vary between 130 and 250 nm.
It has been mentioned throughout this invention that a certain minimum value for dκ(pH)8 is needed to achieve formation of a stable membrane phase at neutral pH. Analysis of the experimental data obtained in example 8 revealed that a higher frequency of very small particles is produced whenever dκ(pH8) is higher than 0.08; indicating the formation of stable liposomes. In numerous examples of this experiment, a surprisingly small Dκ(pH8) of 0.04 was still sufficient for the formation of small particles. However, the frequency of formation of small particles is lower for lower values of dκ(pH8), since these particles did not escape the fusion zone. This analysis is shown in
The experimental data provided herein allow the more general description of successful carriers by screening libraries of amphoteric lipids in silico with κ(min) between 0.09 and 0.15 for amphoter I systems and κ(min)<0.2 for amphoter II systems in combination with dκ(pH8)>0.04. While the easily accessible parameter κ(salt) or κ(salt)n has been used in the screens performed above, the function for κ(min) can be written and for amphoter I systems, there is:
For amphoter II systems, the respective formulas are:
κ(pH8)=xcat*VCH/VCT+xan*(VAH+VCC)/VAT (4a)
κ(min)=xcat*κ(salt)+(xan−xcat)*VAH/VAT (5a)
for systems with anion excess, but
κ(min)=xan*κ(salt)+(xcat−xan)*VCH/VCT (6a)
for systems with cation excess, and
dk(pH8)=κ(pH8)−κ(min) (7a)
For amphoter III systems, the following equations apply:
κ(pH8)=xcat*VCH/VCT+xan*(VAH+VCC)/VAT (8a)
κ(min)=xan*κ(salt)+(xcat−xan)*VCH/VCT (9a)
dk(pH8)=κ(pH8)−K(min) (10a)
In the equations, VAH, VCH, VAT and VCT denote the volumes of the anionic and cationic head and tail groups, respectively and xan and xcat are the fractions of the anionic and cationic component. Vcc is the volume of the counterion.
In amphoter I systems at neutral pH, all of the cationic lipid and the same amount of the anionic lipid form the lipid salt and the remainder of the anionic lipid is charged as in (1a). A reduction in the pH results in protonation of the lipid anion and loss of its counterion until the availability of the charged lipid anion limits the lipid salt formation. All lipid anion is then essentially devoid of counterions either through ongoing protonation or due to its binding in the lipid salt; this is reflected in (2a). The same constraint applies for anion-rich amphoter II systems: κ(min) is found at the left flank of the lipid salt zone at a pH not too far from the pK of the lipid anion and equation (5a) is therefore identical with (2a). The cation-rich amphoter II or the genuine amphoter III systems invert these features in that k(min) is found at the upper end of the lipid salt zone. This is where limiting amounts of the anionic lipid form the lipid salt with the ionized portion of the cationic lipid; the remainder of the cationic lipid being uncharged as in the equations (6a) and (9a). Any reduction in pH would increase κ through further ionization of the cationic lipid and recruitment of counteranions to the membrane. At somewhat higher pH the ionized lipid cation would not suffice to maintain lipid salt and the then liberated lipid anions would recruit their counterions to the bilayer.
At pH 8 both the charged lipid anion and the uncharged lipid cation coexist; again there is no difference between cation-rich amphoter II systems and amphoter III.
Amphoter II systems having an even distribution of anionic and cationic lipids do behave like other amphoter II systems at pH8. As far as κ(min) is concerned, a full salt formation is possible and not limited by either compound. It is therefore
κ(min)=κ(salt). (11a)
The individual pK values, while determining the actual place of the fusion zone, are dispensable as far as κ(min) and κ(pH8) are concerned and the pK of the lipid anion is 2 or more units lower than the pK of the lipid cation to facilitate near completion of the lipid salt formation. Smaller differences between the respective pK values result in incomplete lipid salt formation and κ(total) of the membrane then comprises larger portions of the non-partnered lipid species, thus raising κ(min) and reducing the system amplitude dκ(pH8). The effect is limited towards amphoter II systems and most pronounced in situations where both lipids are present in nearly equimolar amounts. A specific calculation is made under the amphoter II section below. The only non-lipid variable left is the volume of the countercation and this is set at sodium, 65 Å3, for most purposes. The addition of neutral lipids in the screening library was done using a linear mixing of the amphoteric and the neutral lipid part.
Combinatorial libraries were created as tools for the comprehensive analysis of the formulation space using the calculations and parameters from above. For that, the four most typical lipid tail volumes (C2-4 alkyl=280 Å3, cholesterol=340 Å3, dimyristoylglycerol=410 Å3 and dioleoylglycerol=500 Å3) were systematically combined with eight different head groups representing volumes from 40 Å3 up to 200 Å3. The resulting 32 lipids were allowed to adopt all 1024 possible combinations to form charged lipid pairs and further layers of complexity were added in that the molar ratio between the anionic and cationic lipid was kept flexible and in that the then resulting sets of charged amphiphiles were optionally blended with variable amounts of neutral lipids having a κ(neutral)<0.25. Four of such libraries were established to accommodate the differences of the amphoter I, anion-rich amphoter II, equilibrated amphoter II and the cation-rich amphoter II/amphoter III systems.
General Description of Preferred Amphoter I Systems with κ(min)>0.09, κ(min)<0.15, and dκ(pH8)>0.04
A library of lipids was constructed as described and the interaction between lipid anion and cation follow the amphoter I specification. The following tables 20-24 identify positively screened species comprising 0, 20, 30, 40 or 50% cholesterol. Values given in the table represent κ(min); AH, AT, CH and CT denote the anion and cation head and tail groups, respectively.
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No positive amphoter I species were found with 60% cholesterol or more.
An increase in κ(neutral) yields additional selection pressure towards κ(min). Positive system for neutral lipids having κ(neutral)=0.15, 0.2 or 0.25 are shown in the tables 25-27 below that provide such analysis for a neutral lipid content of 30%.
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The selection pressure does also increase with higher amounts of the lipid cation, as the more extensive formation of the lipid salt reduces the system amplitude dκ(pH8). Table 28 below demonstrates the reduced frequency of positive species for amphoter I systems with C/A=0.5 and 30% cholesterol and a C/A of about 0.66 represents the limit for this setup.
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General Description of Preferred Anion-Rich and Equilibrated Amphoter II Systems with κ(Min)<0.18 and dκ(pH8)>0.08
A library of lipids was constructed as described and the interaction between lipid anion and cation follow the amphoter II specification having an excess of the lipid anion or equal amounts of the lipid anion and lipid cation. Since no lipid salt formation limits the system amplitude at neutral pH, a more rigorous screen using dκ(pH8) is demonstrated here. It is of course possible to also screen the libraries with lower selection pressure as done for the amphoter I systems.
The following tables 29-34 identify positively screened species comprising 0, 20, 30, 40, 50 or 60% cholesterol. Values given in the table represent k(min); AH, AT, CH and CT denote the anion and cation head and tail groups, respectively.
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Use of neutral lipids with somewhat higher κ(neutral) is feasible and results for such mixtures comprising 30% of the neutral lipid component with κ(neutral)=0.15, 0.2 or 0.25 are shown below in table 35-37:
untercation si
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untercation si
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In contrast to amphoter I systems, a further increase in the amount of the cationic lipid component does not reduce the system amplitude dκ(pH8), as no lipid salt formation occurs at neutral pH. As such, the system becomes even more permissive and results in a higher frequency of positively screened species as shown below in table 38-40 for anion-rich amphoter II systems comprising 65, 60 or 50% lipid anion and 30% cholesterol.
untercation si
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untercation si
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For amphoter II systems a provision with respect to the difference of the pK values has been made above. The extent of this limitation is shown below in table 41:
The effect is most pronounced for systems having equal amounts of the lipid anion and lipid cation and the equation for κ(min) of equilibrated amphoter II systems having a limiting difference in the pK values is then:
κ(min)=sf*κ(salt)+(1−sf)*(VAH/VAT+VCH/VCT); (12a)
wherein sf denotes the extent of salt formation is shown in table 41.
The reduced formation of the lipid salt leads both to a higher κ(min) and, in consequence, to a reduced dκ(pH8), since κ(pH8) is not affected. A small reduction in the ability of the lipid salt formation therefore results in a rather substantial reduction of fitness of such systems, as shown in tables 42 A-F below for (A) sf=83% and 30% cholesterol; (B)sf=76% and 30% cholesterol; (C) sf=83% and 30% of a neutral lipid having a k(neutral) of 0.2; (D) sf=76% and 30% of a neutral lipid having a k(neutral) of 0.2; (E) sf=76% and 15% cholesterol and (F) sf=83% and 15% cholesterol.
ountercation siz
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General Description of Preferred Cation-Rich Amphoter II and Amphoter III Systems with k(Min)<0.18 and Dk(pH8)>0.08
A library of lipids was constructed as described and the interaction between lipid anion and cation follow the amphoter II specification having an excess of the lipid cation. As with other amphoter II systems, there is no lipid salt formation limiting the system amplitude dκ(pH8) and the more stringent value of 0.08 was used for the screen. Amphoter III systems are guided by the same formulas and the results apply accordingly.
The following tables 43-48 identify positively screened species comprising 0, 20, 30, 40, 50 or 60% cholesterol. Values given in the table represent k(min); AH, AT, CH and CT denote the anion and cation head and tail groups, respectively.
Tables 43-48:
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(min) <
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Use of neutral lipids with somewhat higher κ(neutral) is feasible and results for such mixtures comprising 30% of the neutral lipid component with κ(neutral)=0.15, 0.2 or 0.25 are shown below in table 49-51:
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In contrast to amphoter I systems, a variation in the amount of the cationic lipid component does not challenge the system amplitude dκ(pH8), as no lipid salt formation occurs at neutral pH. The system becomes even more permissive and results in a higher frequency of positively screened species as shown below in table 52-53 for anion-rich amphoter II systems comprising 40 or 45% lipid anion and 30% cholesterol.
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In another aspect of the present invention it was surprisingly found that particles having a certain isoelectric point (IP) between 5 and 6 were most efficacious in cellular transfection. While the fusion zone of amphoteric liposomes is localized around the isoelectric point of a given particle, the cellular response to these fusogenic carriers is limited towards those that become fusogenic in the abovementioned region. This is a cellular aspect that cannot be predicted using the algorithm of this invention.
This finding puts a limitation towards the molar ratios between the lipid anions and lipid cations that can be used to produce said preferred carriers with an IP between 5 and 6. The IP of a given mixture of electrolytes can be calculated as:
IP=−log(Ka*(1−xan/xcat)/2−SQR(Ka*(1−xan/xcat)2+Kc*Ka*xan/xcat))
wherein Ka and Kc are the dissociation constants for the lipid anion and cation, respectively and xan and xcat the respective molar fraction of the two; SQR stands for square root and log for the decadic logarithm.
Solutions of the equation for the preferred ranges of IP are listed below in table 54-58 for amphoter I, II and III systems with respect to the pK values of the lipids.
The pK of 15 stands for the high pK of many primary and secondary amines, but also for the non-existing pK of the ammonium groups in many lipid cations.
It is now possible to further describe the preferred lipid species forming functional amphoteric liposomes. The in silico screening data give detailed description of useful combinations of charged and neutral lipids and include detailed information on their respective head and tail group sizes. The data also show how to identify and select the molar ratio between the lipid anion, lipid cation and one or more neutral lipid species in a membrane. A further specification was also made with respect to the pK of the lipid anions and lipid cations in question and the tables above provide a link between the pK of the charged species and the resulting molar ratios to achieve the preferred IP of the resulting mixture.
The state of the art provides methods and data how to determine the pK of a lipid, e.g. in Hafez et al. (2000) Biochim Biophys Acta 1463, 107-114 or Budker et al. (1996), Nature Biotechnology 14, 760-764) or Heyes et al. (2005), J. Control. Release 107(2), 276-287. Another way to determine the pK of a given structure includes the use of quantitative structure-activity relationships and the databases provided therein, e.g. as in ACD/pka DB (Version 7.06) (Advanced Chemistry Development Inc.), a software program that provides pK analysis and calculation. The experimental pK values may differ from the calculated values to some extent, such difference can be attributed to different experimental methods being used or to the limited chemical activity of the charged groups when placed into the membrane context. In fact, the local concentrations for membrane-bound groups is much higher than in for the same material in free solution and reduced dissociation, hence reduced chemical activity is a known phenomenon for concentrated solutions of electrolytes. This results in a shift towards higher practical pK values for the lipid anions and lower values for the lipid cations, such difference being +1 for the lipid anions and −0.5 for the lipid cations in many aspects of the present invention.
This disclosure integrates experimental data from membrane mixings and cellular transfections with a mathematical description that transforms mechanistic insight based on lipid shape and lipid interaction into a system that allows a detailed description of preferred systems based molecular volumes, interaction types and pK values. While the mathematical description is continuous, any lipid gives a distinct representation within that continuum. The following tables give such distinct representations of some of the lipid head and tail groups that fall within the chemical space described by the experimental data and the in silico screens described above. All molecular volumes and all pK values from tables 59, 60 and 61 were calculated using DS Viewer Pro 5.0 (Accelrys Inc., San Diego, Calif.) and ACD/pka DB (Version 7.06) (Advanced Chemistry Development Inc.), respectively. pK values are given for a molecule in solution and the abovemade considerations for the pK shift in the membrane environment may apply accordingly on a case by case basis.
It is possible to use other tools well-known to those skilled in the art to calculate molecular volumes. The qualitative prediction would not even change if molecular cross-sections were used instead of the volumes. Of course, one would have to re-calibrate the results in such a case.
The molecular volume calculations disclosed herein are silent on chain saturation in the hydrophobic parts. Use of unsaturated lipids may have specific advantages, since lipid membranes comprising such lipids have higher fluidity at ambient temperature which may improve fusion behaviour. It is also known that unsaturated lipids exert lateral pressure in the membrane, thus a correction factor can be inserted to reflect the apparent volume of these components. Such correction factor is higher than 1.
List of the most frequently used lipid tail groups is given in table 1 of this disclosure.
Cholesterol and the zwitterionic phospholipids PC and PE are the most typical components in this category. The respective head group volumes are 30 A3, 136 A3 and 98 A3, respectively. Cholesterol and PE are devoid of counterions, the first due to its neutral character, the second due to formation of a zwitterionic structure. The PC headgroup attracts both one counteranion and one counteraction and the respective molecular volumes are given in table 2 of this disclosure.
The standard charge element for lipid anions in amphoter I and II is the carboxyl group. Direct association with a membrane anchor yields the minimal head groups that are preferred in many formulations. A list of species is provided in the table 59 below.
In preferred embodiments of the invention, the diacylglycerols are dimyristoyl-, dipalmitoyl-, dioleoyl-, distearoyl- and palmitoyloleoylglycerols and R in the table above includes any selection from this group.
Besides the diacylglycerols and cholesterol compounds, long chain fatty acids can be used to construct amphoteric liposomes. While their tail volumes do vary, the head group is defined as the carbonyl atom and the C2. The volume of this fragment is 41.9 Å3 and the pK for these acids is 4.78.
There are two relevant acidic head groups in phospholipids: phosphoglycerol, having a fragment volume of 115.9 Å3 and phosphoserin, with a fragment size of 121.7 Å3. The respective pK values are 1.34 for phosphoglycerol and 8.4 (amino function in phosphatidylserin), 1.96 (carboxyl function in phosphatidylserine) and 1.26 for its phosphate ester.
The cationic lipids head groups are chemically more diverse compared to their anionic counterparts. While a pH-sensitive nitrogen functions as a charge centre, this element can be embedded into various aliphatic, heterocyclic or aromatic structures. The following list provides examples for small cationic head groups.
In preferred embodiments of the invention, the diacylglycerols are dimyristoyl-, dipalmitoyl-, dioleoyl-, distearoyl- and palmitoyloleoylglycerols and the dialkyls are dimyristyl-, dipalmityl-, dioleyl-, distearyl- and palmityloleyl and R in the table above includes any selection from this group.
A number of cationic lipid compounds use cholesterol as a membrane anchor. Typically, linker groups are inserted to mount the charged group onto this backbone and compounds in this group comprise HisChol, MoChol, CHIM and others. Fragment volumes and pK values are listed in the table 61 below.
The documentation provided above allows the identification of useful lipid species with respect to all necessary parameters such as lipid head group size and pK as well as lipid tail group sizes.
The following disclosure combines the abovementioned findings for specific embodiments of the invention. In there, the limitations towards κ(min), dκ(pH8) and IP are applied towards specific lipid chemistries and specific formulations are described.
In some preferred aspects of such embodiment, CHEMS, DMGS, DOGS or Chol-C1 are used as the anionic lipid species. The following table 62 provide an analysis for these lipids in amphoter I systems, wherein the lipid cation is a strong cation with a pK greater then 8.5 and said lipid cation has VCH=50 Å3 or 100 Å3, respectively and VCT=500 Å3, wherein the neutral lipid is cholesterol, κ(min)<0.13 and >0.09; dκ(pH8)>0.04 and the IP between 5 and 6:
Table 63 provides such analysis for neutral lipids having a κ(neutral)=0.2.
Lowering the pK of the lipid cation towards 7.5 or 8 results in a first improvement of the system amplitude, as less lipid anion is sequestered into the lipid salt at pH8. The following table 64 provides an analysis for such systems wherein CHEMS, DMGS, DOGS or Chol-Clare used as the anionic lipid species; the lipid cation has a pK of 7.7 and the lipid cation has VCH=50 Å3 or 100 Å3, respectively and VCT=500 Å3, wherein the neutral lipid is cholesterol, κ(min)<0.13 and >0.09; dκ(pH8)>0.04 and the IP between 5 and 6:
The following table 65 provides an analysis for the systems described for 64, but with κ(neutral)=0.2.
A further lowering the pK of the lipid cation towards 7 releases the selection pressure from dκ(pH8) as no substantial lipid salt formation occurs at neutral pH anymore. The following table 66 provides an analysis for such amphoter II systems wherein CHEMS, DMGS, DOGS or Chol-C1 are used as the anionic lipid species; the lipid cation has a pK of 7.0 and the lipid cation has VCH=50 Å3 or 100 Å3, respectively and VCT=500 Å3, wherein the neutral lipid is cholesterol, κ(min)<0.18 and >0.09; dκ(pH8)>0.08 and the IP between 5 and 6:
Substitution of the neutral lipid used in table 66 towards a species with larger κ(neutral) of 0.2 results in the following picture of table 67:
As discussed before, a further lowering the pK of the lipid cation towards 6.3 creates a limitation for the ability of the lipid anion and lipid cation to maximize the lipid salt formation at the isoelectric point of the mixture, said limitation raises κ(min) and reduces dκ(pH8) at the same time. The following table 68 provides an analysis for such amphoter II systems wherein CHEMS, DMGS, DOGS or Chol-Clare used as the anionic lipid species; the lipid cation has a pK of 6.3 and the lipid cation has VCH=50 Å3 or 100 Å3, respectively and VCT=500 Å3, wherein the neutral lipid is cholesterol, κ(min)<0.18 and >0.09; dκ(pH8)>0.08 and the IP between 5 and 6:
Eventually, the lipid systems described in table 68 are also analyzed in presence of a neutral lipid system having a κ(neutral) of 0.2, results are provided in table 69 below:
In summary, the amphoteric liposomes of the present invention comprise neutral lipids selected from cholesterol or mixtures of cholesterol with one or more neutral or zwitterionic lipids, such as phosphatidylethanolamine or phosphatidylcholine and are well suited for the delivery of active agents into cells or tissues. Numerous specific examples for active formulations are disclosed in the description and in the examples of this invention. The chemical space providing a high frequency of successful compositions has been described using an algorithm and the parameters κ(min) and dκ(pH8) described therein; particularly preferred formulations have
Examples are given with the understanding of further detailing certain aspects of practising the current invention. The examples by no means limit the scope of this disclosure.
Liposomes were formed from a dried lipid film. In brief, 20 μmol of the respective lipid composition was dissolved in 1 mL chloroform/methanol 3:1 and dried in vacuum using a rotary evaporator. The resulting film was hydrated for 45 min in 1 mL of CiP 8.0 with gentle agitation. The resulting liposome suspension was frozen, sonicated after thawing and eventually extruded through 200 nm polycarbonate filters.
pH-Jump Experiment
10 μl liposomes in CiP 8.0 were placed into a glass tube and mixed rapidly with 1 mL of CiP buffer of the pH needed. Samples were allowed to stand for 1 h at room temperature and 3 mL of 200 mM sodium hydrogen phosphate were rapidly mixed with the sample. Liposomes were analyzed for size using a MALVERN Zetasizer 3000HS and sizes were recorded as Z-average.
Liposomes were prepared from DOTAP and CHEMS in sodium citrate/sodium phosphate pH 8.0 (CiP 8.0) and small amounts were injected into a CiP buffer with a lower pH (see Example 1 for details). Any larger structures observed at the lower pH might be either due to aggregate formations and generation of multicentric honeycomb structures or such structures might result from genuine fusion. To separate between these two outcomes we readjusted the pH to neutrality using 200 mM sodium hydrogen phosphate. Electrostatic repulsion dissociates multicentric vesicles but not fusion products. The results are illustrated in
As predicted in the mathematical salt bridge model, a valley of instability exists at slightly acidic conditions and fusion to larger particles was observed starting from pH 6.5. However, fast addition of the liposomes into low pH resulted in stabilisation of the particles as long as some DOTAP was present in the mixture. Liposomes from 100 mol. % CHEMS enter a fusogenic state below pH 4.5 and do not get stabilised at the lower pH.
Noteworthy, a 1:1 mixture of DOTAP/CHEMS cannot form liposomes in CiP 8.0 which is in good agreement with the mathematical model that predicts a non-lamellar phase for these parameters.
Liposomes were prepared from MoChol and CHEMS in sodium citrate/sodium phosphate pH 8.0 (CiP 8.0) and small amounts were injected into a CiP buffer with a lower pH (see Example 1 for details). Any larger structures observed at the lower pH might be either due to aggregate formations and generation of multicentric honeycomb structures or such structures might result from genuine fusion. To separate between these two outcomes we readjusted the pH to neutrality using 200 mM sodium hydrogen phosphate. Electrostatic repulsion dissociates multicentric vesicles but not fusion products.
Experimental evidence supports the salt bridge model. (See
The parameters used for the calculation are given in Table 70 below; CHEMS and MoChol in Na/H2PO4 were used as model compounds; all volumes in Å3.
Oleic acid was chosen as a known and popular pH-sensitive membrane component. As the lipid tail is relatively small in volume, any change in the head-group has more pronounced consequences for the membrane stability. As shown in
To investigate the fusability of different amphoteric lipid mixtures a lipid mixing assay, based on FRET was used. Liposomes, single labelled with 0.6 mol % NBD-PE (N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)-1,2-dihexadecanoyl-sn-glycero-3-phosphoethanol-amine, triethylammonium salt) or Rhodamine-PE (Lissamine™ rhodamine B 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine, triethylammonium salt), respectively, were prepared to monitor lipid fusion through the appearance of a FRET signal.
Lipids were dissolved in isopropanol (final lipid concentration 16 mM) and mixed. Liposomes were produced by adding buffer (acetic acid 10 mM, phosphoric acid 10 mM, NaOH, pH 7.5) to the alcoholic lipid mix, resulting in a final lipid concentration of 1.95 mM and a final isopropanol concentration of 12.2%. For the preparation of the liposomes a liquid handling robot (Perkin Elmer, Multiprobe II Ex) was used. The NBD-labelled and Rh-labelled amphoteric liposomes were combined in a ratio 1:1 and subsequent diluted 1:1 with the buffer mentioned above. Finally small aliquots of this mixed sample were brought to decreasing specific pH(HAc 50 mM, Phosphoric acid 50 mM, NaOH, pH 7.5-2.5) and incubated at 37° C. for 2 h. Liposomes were diluted again 1:1 in this step.
Samples were measured for fluorescence using two sets of filters:NBD/Rhodamine:460/590 nm and NBD/NBD:460/530 nm. FRET as a signal for membrane fusion was expressed as the ratio of emission(590 nm)/emission (530 nm). A background of 0.4 indicates background fluorescence and was therefore subtracted from the FRET signals.
To discriminate between fusion and mere aggregation the suspension was neutralized to pH 7.5 and FRET signals were measured again. A possible interference of the remaining alcohol content of 3% on the fusion of the liposomes was excluded by pre-experiments.
Amphoteric liposomes with increasing amounts of neutral or zwitterionic lipids were prepared as described in Example 5. Initially, an amphoter I system (DOTAP/DMGS) and an amphoter II (MoChol/DOGS) were prepared with the addition of 10-50% different neutral or zwitterionic lipids or mixtures thereof. Fusion was measured for a series of liposomes having different C/A ratios. Systems can be characterized using the sum of all such measurements in the entire matrix. The effect of the neutral or zwitterionic lipids was then analyzed using this global parameter (Σ FRET).
In a further experiment the effect of POPC or cholesterol on the fusogenicity of other amphoteric lipid systems were determined. Tables 72 and 73 summarize these data and confirm the results of the first part of the experiment. Tables 72 and 73 show the Σ Fret and range of C/A ratios for which the amphoteric liposomes are stable at pH 7 to pH 8 and fuse between pH 3 to pH 6, preferably between pH 4 to pH 6.
It becomes apparent that amphoteric lipid systems having low fusogenicity can be clearly improved by the addition of cholesterol. Furthermore the results indicate that cholesterol may have also an impact on the range of fusogenicity. This means that the range of C/A ratios can be broadened.
>0-0.67
>0-0.67
>0-0.67
>0-0.17
Fusion assays were performed as described in Example 5. DOTAP/Oleic Acid formulations with 0 or 20 mol % cholesterol were tested for fusion in cation/anion molar ratios (C/A ratio) of 0.17, 0.33, 0.40, 0.50, 0.67, 0.75 and pure anionic liposomes were prepared as controls.
The following Tables 74 and 75 show the fusion profiles for the two DOTAP/Oleic acid amphoter systems as matrix C/A vs. pH. In addition the fusion of liposomes of pure anionic lipid is shown (C/A=0).
The tables indicate that the addition of cholesterol leads to a colloidal stabilization of amphoteric liposomes at pH 7.5 and C/A ratios of 0.67 and 0.75.
Liposomes were manufactured by an isopropanol-injection method. Lipids were dissolved in isopropanol (30 mM lipid concentration) and mixed. Liposomes were produced by adding siRNA solution in NaAc 20 mM, Sucrose 300 mM, pH 4.0 (pH adjusted with HAc) to the alcoholic lipid mix, resulting in a final alcohol concentration of 30%. The formed liposomal suspensions were shifted to pH 7.5 with twice the volume of Na2HPO4 136 mM, NaCl 100 mM (pH 9), resulting in a final lipid concentration of 3 mM and a final isopropanol concentration of 10%.
Some formulations were prepared with 20 mM lipid as starting concentration and 2 mM as final lipid concentration. Such formulations were marked with an asterisk in table 76 and table 77.
N/P=the ratio cationic charges from the lipids to anionic charges from the siRNA during manufacturing.
Size of the liposomal formulations was characterized using dynamic light scattering (Zetasizer 3000, Malvern).
Following Liposomal Amphoter I Formulations Encapsulating siRNA Targeting PLK-1 or Non-Targeting Scrambled siRNA were Produced:
PLK-1 siRNA as in Haupenthal et al., Int J Cancer, 121, 206-210 (2007).
Following liposomal amphoter II formulations encapsulating siRNA targeting PLK-1 or non-targeting scrambled siRNA were produced:
HeLa cells were obtained from DSMZ (German Collection of Micro Organism and Cell Cultures) and maintained in DMEM. Media were purchased from Gibco-Invitrogen and supplemented with 10% FCS. The cells were plated at a density of 2.5*104 cells/ml and cultivated in 100 μl medium at 37° C. under 5% CO2. After 16 h the liposomes containing siRNA were diluted in the manufacturing buffer system (see above) or in PBS or in OptimemI (Gibco-Invitrogen), optionally after a preincubation in serum. Then 10 μl were added to the cells (110 μl final Volume and 9.1% FCS per well) (doses varied of between 0.4 to 150 nM Plk1 or scrambled siRNA and maximum tested doses varied for Amphoter I formulations of between 12.5 and 150 nM and for Amphoter II of between 40 and 150 nM). 10 μl dilution buffer were also added to untreated cells and into wells without cells. In addition, as control, free siRNA was added to the cells (10 to 80 nM Plk-1 or scrambled siRNA). Cell culture dishes were incubated for 72 h hours at 37° C. under 5% CO2. Transfection efficiency was analyzed using a cell proliferation/viability assay.
Cell proliferation/viability was determined by using the CellTiter-Blue Cell Viability assay (Promega, US). In brief, 72 hours after transfection, 100 μl Medium/CellTiter-Blue reagent (Pre-mix of 80 μl Medium and 20 μl CellTiter-Blue reagent) were added to the wells. Following incubation at 37° C. for 2.5 hours, 80 μl of the medium were transferred into the wells of a black microtiter plate (NUNC, Denmark). Fluorescence was recorded using a fluorescence plate reader (Ex. 550 nm/Em. 590 nm). On each plate the following controls were included: i) wells without cells but with medium (control for culture medium background fluorescence) and ii) wells with cells (untreated cells=mock-transfected cells). For calculation, the mean fluorescence value of the culture medium background was subtracted from all mean (triplicates) values of experimental wells (transfected and mock-transfected cells). The fluorescence values from each transfection were normalized to the mean fluorescence value from mock-transfected cells, which was set as being 100%.
The plot clearly shows an optimum of the transfection efficiency of the amphoter I liposomes at a specific range of κ(min) values.
Similarly, in
It becomes apparent from the figure that the amphoteric liposomes have to reach a certain minimum of κ(min) to transfect the cells.
The plot in
The influence of the addition of the neutral lipids on the transfection efficiency of two selected amphoteric lipid mixtures is demonstrated in
Furthermore, the influence of the isoelectric point (IP) of the amphoteric lipid mixtures on the transfection efficiency of the inventive amphoteric liposomes is shown in
Preparation of Liposomes Encapsulating siRNA Targeting ApoB 100 or Non-Targeting Scrambled (Scr) siRNA:
Liposomes were manufactured by an isopropanol-injection method. Lipid mixtures were dissolved in isopropanol. A stock solution of the active ApoB 100 or non-active scrambled siRNA was diluted in buffer to the appropriate concentration and was transferred to a round-bottom flask. Both solutions were mixed at pH 4 using an injection device with pumps in a ratio 10:23.3 (lipids in solvent: siRNA in aqueous buffer) to an isopropanol concentration of 30%. The resulting liposomal suspensions were shifted to pH 7.5 and a final alcohol concentration of 10%. The final liposomes were dialyzed to remove non-encapsulated siRNA and the alcohol. Subsequently, the liposomal suspensions were concentrated to the desired siRNA-concentration.
ApoB 100 siRNA as in Soutschek et al., Nature, 432, 173-178 (2004), further comprising a 5′ phosphorylation on the guide strand.
Primary mouse hepatocytes were isolated according to the protocol of Seglen (Seglen, P.O. Preparation of isolated rat liver cells. Methods Cell Biol. 13:29-83; 1976) and modified for mouse cell preparation. The mouse hepatocytes were resuspended finally in DME-Media (Gibco-Invitrogen). The cells were plated onto 6-well-plates at a density of 4×105 cells/well and cultivated in 2000 μl of DME-Media with 10% FCS at 37° C. under 5% CO2.
For transfection the liposomes containing siRNA were diluted in Optimem I (Gibco-Invitrogen, Karlsruhe, Germany) to the desired dose. A volume of 200 μl were added to the cells (2200 μl final volume and 9.1% FCS per well). Cells treated with Optimem I or dialysis buffer served as untreated control. Cell culture dishes were incubated for 70 h hours at 37° C. under 5% CO2.
Reduction of the target mRNA (ApoB) was quantified using the Quantigene Assay (Panomics, Fremint, Calif., USA).
Both amphoteric liposome formulations show a knockdown of the target ApoB mRNA in a dose dependent manner down to 5 or 20% compared to the untreated cells (see
Preparation of Liposomes Encapsulating siRNA Targeting PLK-1 or Non-Targeting Scrambled (Scr) siRNA:
Liposomes F1-F4 were manufactured by an isopropanol-injection method. Lipid mixtures were dissolved in isopropanol. A stock solution of the active PLK-1 or non-active scrambled siRNA was buffer to the appropriate concentration and was transferred to a round-bottom flask. Both solutions were mixed at pH 4 using an injection device with pumps in a ratio 10:23.3 (lipids in solvent: siRNA in aqueous buffer) to an isopropanol concentration of 30%. The resulting liposomal suspensions were shifted to pH 7.5 and a final alcohol concentration of 10%. Subsequently, the liposomal suspensions were concentrated to the desired siRNA-concentration.
PLK-1 siRNA as in Haupenthal et al., Int J Cancer, 121, 206-210 (2007).
RAW 264.7 cells were obtained from ATCC and maintained in DMEM. Media were purchased from Gibco-Invitrogen and supplemented with 10% FCS. The cells were plated at a density of 4*104 cells/ml and cultivated in 100 μl medium at 37° C. under 5% CO2. Liposomes containing siRNA were diluted in the manufacturing buffer system. Then 10 μl were added to the cells (114 μl final Volume and 9.1% FCS per well) (19 to 600 nM Plk1 or scrambled siRNA). 10 μl dilution buffer were also added to untreated cells and into wells without cells. Cell culture dishes were incubated for 72 h hours at 37° C. under 5% CO2. Transfection efficiency was analyzed using a cell proliferation/viability assay as described in example 8.
The amphoteric liposome formulations F1-F4 encapsulating PLK-1 siRNA are effective in transfecting RAW 264.7 cells, a mouse leukaemic monocyte macrophage cell line. IC 50 values are shown in table 80 below:
Preparation of siRNA Encapsulating Liposomes:
Amphoteric liposomes encapsulating a mixture of Plk-1 siRNA/scr siRNA-Cy 5.5 labelled (9:1 w/w) were prepared as described in example 10. After the manufacturing process the liposomes are concentrated and dialyzed to remove non-encapsulated siRNA and the alcohol.
For determination of the serum stability the liposomes were diluted to a lipid concentration of 2 mM and then incubated in 75% mouse serum at 37° C. for 2 h (final lipid concentration 0.5 mM). Release of siRNA during serum incubation was monitored by gel electrophoresis on a 15% polyacrylamide gel (Biorad) in TBE buffer. As only free siRNA enters the gel the siRNA released from the liposomes during serum incubation can be detected on the gel using an ODYSSEY Infrared Imaging System (LI-COR Biosciences) which detects the Cy 5.5 labelled siRNA.
Amphoteric liposomes F5, F7 and F8 of example 11 were injected intravenously into the tail vein of female BALB/c mice in a dose of 8 mg/kg siRNA. Mice were sacrificed after 2 h and cryosections of liver and spleen were prepared and analyzed using an ODYSSEY Infrared Imaging System (LI-COR Biosciences) which detects the Cy 5.5 labelled siRNA. Average intensities of the cryosections are calculated by total intensity/area.
Mice showed no signs of side effects, such as scrubby fur, dyspnea or apathy.
The biodistribution of the amphoteric liposomes after two hours in liver and spleen is shown in
siRNA-loaded amphoteric liposomes were manufactured using non-targeting scrambled siRNA. The lipid mixtures A (DC-Chol:DMGS:Chol, 26:39:35 mol %) or B (DC-Chol:DMGS:Chol, 20:40:40 mol %) were dissolved at a concentration of 30 mM or 60 mM (final lipid concentration) for both mixtures in ethanol. Appropriate volumes of siRNA stock were diluted in 20 mM NaAc, 300 mM Sucrose/NaOH pH 4.0. The organic and the aqueous solution were mixed in a 3:7 ratio and the liposomal suspension was immediately shifted to pH>7.5 with 136 mM Na2HPO4, 100 mM NaCl.
The amount of unencapsulated siRNA was determined by using ultrafiltration with Centrisart (Molecular Weight Cut off 300 kD (Sartorius, Gottingen, Germany)). The siRNA concentration of the filtrate was measured spectroscopically (OD260 nm). The amount of encapsulated oligonucleotide was determined by subtraction of unencapsulated amount of siRNA from the total amount of siRNA.
Particle Characteristics after Manufacturing:
The compound was synthesized according to Xu et al., Synlett 2003, 2425-2427. Briefly, 5.26 g 3-Methylamino-1,2-propanediol was added to 80 ml acetonitrile and the mixture was stirred for 2.5 h. Then 4.31 g acrylic acid methylester and 0.5 g copper(II) acetate monohydrate were added and the reaction was allowed to stir overnight at room temperature. The solvent was removed by rotary evaporation and the crude product, a blue oil, was purified by a flash column chromatography on silica gel (eluent: acetic acid ethylester). The product, a colourless oil, was characterized by 1H-NMR.
1.9 g 1,2-Dihydroxy-3-methyl-(methoxycarbonyl-ethyl)ammonium-propane were dissolved in 40 ml dry dichloromethane. Subsequently, 2.23 g triethylamine and 0.318 mg 4-dimethylaminopyridine were added and the mixture was cooled with an ice bath down to 5-10° C. Then a solution of 6.62 g oleic acid chloride in 10 ml dichloromethane was added dropwise to the reaction mixture whereas the temperature was controlled to be lower than 15° C. After the addition the ice bath was removed and the mixture allowed to stir at 20° C. for two hours. Finally, the reaction mixture was filtered and the residue washed with 50 ml dichloromethane. The solvent of the filtrate was removed by rotary evaporation and the crude product, a yellow oil, was purified by flash column chromatography on silica gel (eluent: acetic acid ethylester:petrolether 1:9). The product, a yellow oil, was characterized by 1H-NMR and LC-MS.
Under N2 atmosphere 2 g pyrrolidino-1,2-propandiol were combined with 25 ml dichloromethane. Then 2.79 g triethylamine and 0.01 g 4-dimethylaminopyridine were added and the reaction mixture was stirred and cooled in an ice bath. Subsequently, 8.29 g oleic acid chloride in 25 ml dichloromethane were added dropwise over 45 min. The reaction mixture was allowed to stir for 2 days at room temperature. The crude product was purified by column chromatography on silica gel (eluent: acetic acid ethyl ester:petrol ether 1:1). The product, a yellow oil, was characterized by 1H-NMR, 13C-NMR and LC-MS.
Under N2 atmosphere 7.75 g 3-bromo-1,2-propandiol were dissolved in 300 ml dichloromethane. The reaction mixture was cooled with an ice bath and subsequently 19.39 g N,N-diisopropyl ethylamine and 36.11 g oleic acid chloride were added. The reaction was allowed to stir over night. Then the solvent was removed by rotary evaporation. After the addition of 300 ml petrol ether a white solid precipitated which was removed. The crude product was purified by flash column chromatography on silica gel (eluent: petrol ether). The product, a yellow oil was characterized by 1H-NMR.
5.56 g 1,2-Dioleoyl-3-bromo-propane were dissolved in 80 ml pyridine and the reaction mixture was allowed to stir over night at 85° C. The solvent was removed by rotary evaporation and the crude product was purified by column chromatography on silica gel (eluents: chloroform; chloroform:methanol 4:1). The product, a brown oil, was characterized by 1H-NMR.
| Number | Date | Country | Kind |
|---|---|---|---|
| 06255277.3 | Oct 2006 | EP | regional |
| PCT/EP2007/008917 | Dec 2007 | EP | regional |
| 08007302.6 | Apr 2008 | EP | regional |
| PCT/EP2008/005221 | Jun 2008 | EP | regional |
| Number | Date | Country | |
|---|---|---|---|
| Parent | 13789199 | Mar 2013 | US |
| Child | 14049669 | US | |
| Parent | 12682703 | Jun 2010 | US |
| Child | 13789199 | US | |
| Parent | 11974350 | Oct 2007 | US |
| Child | 12682703 | US |
| Number | Date | Country | |
|---|---|---|---|
| Parent | 11581054 | Oct 2006 | US |
| Child | 11974350 | US |
