COMPOSITIONS AND METHODS FOR INHIBITING NUCLEAR RECEPTOR SUBFAMILY 1 GROUP H MEMBER 3 (NR1H3) EXPRESSION

Information

  • Patent Application
  • 20220340912
  • Publication Number
    20220340912
  • Date Filed
    April 19, 2022
    2 years ago
  • Date Published
    October 27, 2022
    a year ago
Abstract
Oligonucleotides are provided herein that inhibit NR1H3 expression. Also provided are compositions including the same and uses thereof, particularly uses relating to treating diseases, disorders and/or conditions associated with NR1H3 expression.
Description
SEQUENCE LISTING

The instant application contains a Sequence Listing which has been submitted in ASCII format via EFS-Web and is hereby incorporated by reference in its entirety. Said ASCII copy, created on Apr. 19, 2022, is named 210010US02_SeqList.txt and is 700 kilobytes in size.


BACKGROUND

The liver plays a critical role in the metabolism of lipids. Abnormalities in normal hepatic lipid metabolism are associated with the development of various liver diseases or disorders such as non-alcoholic fatty liver disease (NAFLD) and its subsequent progression to non-alcoholic steatohepatitis (NASH) and potentially other advanced liver abnormalities.


NAFLD is one of the most common liver diseases, with increasing prevalence worldwide (Loomba R., & Sanyal A. J. NAT. REV. GASTROENTEROL HEPATOL. (2013); 10(11): 686-90). NAFLD is a liver disease characterized by a spectrum of clinical and pathological severity ranging from simple steatosis to nonalcoholic fatty liver (NAFL), nonalcoholic steatohepatitis (NASH), fibrosis, cirrhosis, hepatocellular carcinoma (HCC) and liver failure (Bessone F, et al., CELL MOL. LIFE SCI. (2019); 76(1): 99-128). NAFLD is characterized by the presence of fat in the liver in the absence of significant alcohol use and other causes of fat accumulation in the liver such as medications, starvation, and viral disease (Chalasani, N., et al., HEPATOLOGY (Baltimore, Md.), (2012); 55(6): 2005-23). Additionally, as the disease progresses, NASH patients also have an increased risk of developing extra-hepatic complications, particularly cardiovascular diseases (CVD), which are among the most common causes of death in this patient population (Patil R, et al., WORLD J. GASTROINTEST. PATHOPHYSIOL. (2017); 8(2): 51-8). The abnormalities in hepatic lipid metabolism that lead to NAFLD also drive the progression of atherogenic dyslipidemia, where elevated plasma triglycerides (TG) cholesterol and lipoprotein particles infiltrate the arterial wall and subsequently develop atherosclerotic plaques (Loomba R & Sanyal A J NAT. REV. GASTROENTEROL. HEPATOL. (2013); 10(11): 686-90). Thus, there is a significant medical need for the development of disease modifying therapeutics for NAFLD.


SUMMARY OF DISCLOSURE

The disclosure is based in part on the discovery of oligonucleotides (e.g., RNAi oligonucleotides) that reduce NR1H3 (nuclear receptor subfamily 1, group H, member 3) expression in the liver. Specifically, target sequences within NR1H3 mRNA were identified and oligonucleotides that bind to these target sequences and inhibit NR1H3 mRNA expression were generated. As demonstrated herein, the oligonucleotides inhibited murine, monkey and/or human NR1H3 expression in the liver. Without being bound by theory, the oligonucleotides described herein are useful for treating a disease, disorder or condition associated with NR1H3 expression (e.g., non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), or systemic lupus erythematosus).


In an aspect, the invention provides an RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length. In an aspect, the invention provides an RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1125-1511, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


In some embodiments, the RNAi oligonucleotide comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is selected from SEQ ID NOs: 786, 787, 1537 and 813, and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, the RNAi oligonucleotide comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is selected from SEQ ID NOs: 1509, 1510 1409, and 1511 and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments of the RNAi oligonucleotide: (i) the sense strand is 15 to 50 or 18 to 36 nucleotides in length, optionally 36 nucleotides in length; optionally (ii) the antisense strand is 15 to 30 nucleotides in length, optionally 22 nucleotides in length; and optionally (iii) the duplex region is at least 19 nucleotides or at least 20 nucleotides in length.


In some embodiments of the RNAi oligonucleotide, the region of complementarity is at least 19 contiguous nucleotides in length, optionally at least 20 contiguous nucleotides in length, optionally 20 contiguous nucleotides, and optionally wherein the region of complementarity is fully complementary to the mRNA target sequence at nucleotide positions 2-8 of the antisense strand or positions 2-11 of the antisense strand, nucleotide numbering 5′ to 3′.


In some embodiments of the RNAi oligonucleotide: the 3′ end of the sense strand comprises a stem-loop set forth as S1-L-S2, wherein (i) S1 is complementary to S2, optionally wherein S1 and S2 are each 1-10 nucleotides in length and have the same length, optionally wherein S1 and S2 are each 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 nucleotides in length, further optionally wherein S1 and S2 are 6 nucleotides in length; and (ii) L forms a loop between S1 and S2 of 3-5 nucleotides in length, optionally wherein L is a triloop or a tetraloop, optionally wherein the tetraloop comprises the sequence 5′-GAAA-3′, optionally wherein the stem-loop comprises the sequence 5′-GCAGCCGAAAGGCUGC-3′ (SEQ ID NO: 1121). In some embodiments of the RNAi oligonucleotide comprises a nicked tetraloop structure or comprises a nick between the 3′ terminus of the sense strand and the 5′ terminus of the antisense strand.


In some embodiments of the RNAi oligonucleotide: the antisense strand comprises an overhang sequence of one or more nucleotides in length at the 3′ terminus, optionally wherein the overhang comprises purine nucleotides, optionally wherein the overhang sequence is 2 nucleotides in length, optionally wherein the overhang is selected from AA, GG, AG, and GA, optionally wherein the overhang is GG.


In some embodiments of the RNAi oligonucleotide: (i) the oligonucleotide comprises at least one modified nucleotide, optionally wherein the modified nucleotide comprises a 2′-modification, optionally wherein: (a) the 2′-modification is a modification selected from 2′-aminoethyl, 2′-fluoro, 2′-O-methyl, 2′-O-methoxyethyl, and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid, optionally wherein the modification is selected from 2′-fluoro and 2′-O-methyl, optionally wherein all nucleotides of the oligonucleotide are modified, wherein the modification is 2′-fluoro and 2′-O-methyl; (b) about 10-15%, 10%, 11%, 12%, 13%, 14%, or 15% of the nucleotides of the sense strand comprise a 2′-fluoro modification; (c) about 25-35%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, or 35% of the nucleotides of the antisense strand comprise a 2′-fluoro modification; (d) about 25-35%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, or 35% of the nucleotides of the oligonucleotide comprise a 2′-fluoro modification; (e) the sense strand comprises 36 nucleotides with positions 1-36 from 5′ to 3′, wherein positions 8-11 comprise a 2′-fluoro modification; (f) the antisense strand comprises 22 nucleotides with positions 1-22 from 5′ to 3′, and wherein positions 2, 3, 4, 5, 7, 10, and 14 comprise a 2′-fluoro modification; and/or (g) the remaining nucleotides comprise a 2′-O-methyl modification, and/or (ii) the oligonucleotide comprises at least one modified internucleotide linkage, optionally wherein the at least one modified internucleotide linkage is a phosphorothioate linkage, optionally wherein: (a) the antisense strand comprises a phosphorothioate linkage (i) between positions 1 and 2, and between positions 2 and 3; or (ii) between positions 1 and 2, between positions 2 and 3, and between positions 3 and 4, wherein positions are numbered 1-4 from 5′ to 3′; and/or (b) the antisense strand is 22 nucleotides in length, and wherein the antisense strand comprises a phosphorothioate linkage between positions 20 and 21 and between positions 21 and 22, wherein positions are numbered 1-22 from 5′ to 3′, and/or (iii) the antisense strand comprises a phosphorylated nucleotide at the 5′ terminus, wherein the phosphorylated nucleotide is selected from uridine and adenosine, optionally wherein the phosphorylated nucleotide is uridine, and/or (iv) the 4′-carbon of the sugar of the 5′-nucleotide of the antisense strand comprises a phosphate analog, optionally wherein the phosphate analog is oxymethylphosphonate, vinylphosphonate or malonylphosphonate, optionally wherein the phosphate analog is a 4′-phosphate analog comprising 5′-methoxyphosphonate-4′-oxy, and/or (v) at least one nucleotide of the oligonucleotide is conjugated to one or more targeting ligands, optionally wherein: (a) each targeting ligand comprises a carbohydrate, amino sugar, cholesterol, polypeptide or lipid; (b) the stem loop comprises one or more targeting ligands conjugated to one or more nucleotides of the stem loop; (c) the one or more targeting ligands is conjugated to one or more nucleotides of the loop, optionally wherein the loop comprises 4 nucleotides numbered 1-4 from 5′ to 3′, wherein nucleotides at positions 2, 3, and 4 each comprise one or more targeting ligands, wherein the targeting ligands are the same or different; (d) each targeting ligand comprises a N-acetylgalactosamine (GalNAc) moiety, optionally wherein the GalNAc moiety is a monovalent GalNAc moiety, a bivalent GalNAc moiety, a trivalent GalNAc moiety or a tetravalent GalNAc moiety; and/or (e) up to 4 nucleotides of L of the stem-loop are each conjugated to a monovalent GalNAc moiety.


In some embodiments of the RNAi oligonucleotide, the targeting ligand comprises at least one GalNAc moiety and targets human liver cells (e.g., human hepatocytes).


In some embodiments of the RNAi oligonucleotide: (i) the sense strand comprises a nucleotide sequence of any one of SEQ ID NOs: 769-856, SEQ ID NOs: 1519-1552, SEQ ID NOs: 1409, 1509-1511, or SEQ ID NOs: 945-1032, optionally a nucleotide sequence selected from SEQ ID NOs: SEQ ID NOs: 786, 787, 813, and 1537; and optionally (ii) the antisense strand comprises a nucleotide sequence of any one of SEQ ID NOs: 857-944 or SEQ ID NOs: 1033-1120, optionally a nucleotide sequence selected from SEQ ID NOs: 874, 875, 901, and 929.


In some embodiments of the RNAi oligonucleotide: the sense strand and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively.


In some embodiments of the RNAi oligonucleotide: the sense and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 945 and 1033, respectively;


(b) SEQ ID NOs: 946 and 1034, respectively;


(c) SEQ ID NOs: 947 and 1035, respectively;


(d) SEQ ID NOs: 948 and 1036, respectively;


(e) SEQ ID NOs: 949 and 1037, respectively;


(f) SEQ ID NOs: 950 and 1038, respectively;


(g) SEQ ID NOs: 951 and 1039, respectively;


(h) SEQ ID NOs: 952 and 1040, respectively;


(i) SEQ ID NOs: 953 and 1041, respectively;


(j) SEQ ID NOs: 954 and 1042, respectively;


(k) SEQ ID NOs: 955 and 1043, respectively;


(l) SEQ ID NOs: 956 and 1044 respectively;


(m) SEQ ID NOs: 957 and 1045, respectively;


(n) SEQ ID NOs: 958 and 1046, respectively;


(o) SEQ ID NOs: 959 and 1047, respectively;


(p) SEQ ID NOs: 960 and 1048, respectively;


(q) SEQ ID NOs: 961 and 1049, respectively;


(r) SEQ ID NOs: 962 and 1050, respectively;


(s) SEQ ID NOs: 963 and 1051, respectively;


(t) SEQ ID NOs: 964 and 1052, respectively;


(u) SEQ ID NOs: 965 and 1053, respectively;


(v) SEQ ID NOs: 966 and 1054, respectively;


(w) SEQ ID NOs: 967 and 1055, respectively;


(x) SEQ ID NOs: 968 and 1056, respectively;


(y) SEQ ID NOs: 969 and 1057, respectively;


(z) SEQ ID NOs: 970 and 1058, respectively;


(aa) SEQ ID NOs: 971 and 1059, respectively;


(bb) SEQ ID NOs: 972 and 1060, respectively;


(cc) SEQ ID NOs: 973 and 1061, respectively;


(dd) SEQ ID NOs: 974 and 1062, respectively;


(ee) SEQ ID NOs: 975 and 1063, respectively;


(ff) SEQ ID NOs: 976 and 1064, respectively;


(gg) SEQ ID NOs: 977 and 1065, respectively;


(hh) SEQ ID NOs: 978 and 1066, respectively;


(ii) SEQ ID NOs: 979 and 1067, respectively;


(jj) SEQ ID NOs: 980 and 1068, respectively;


(kk) SEQ ID NOs: 981 and 1069, respectively;


(ll) SEQ ID NOs: 982 and 1070, respectively;


(mm) SEQ ID NOs: 983 and 1071, respectively;


(nn) SEQ ID NOs: 984 and 1072, respectively;


(oo) SEQ ID NOs: 985 and 1073, respectively;


(pp) SEQ ID NOs: 986 and 1074, respectively;


(qq) SEQ ID NOs: 987 and 1075, respectively;


(rr) SEQ ID NOs: 988 and 1076, respectively;


(ss) SEQ ID NOs: 989 and 1077, respectively;


(tt) SEQ ID NOs: 990 and 1078, respectively;


(uu) SEQ ID NOs: 991 and 1079, respectively;


(vv) SEQ ID NOs: 992 and 1080, respectively;


(ww) SEQ ID NOs: 993 and 1081, respectively;


(xx) SEQ ID NOs: 994 and 1082, respectively;


(yy) SEQ ID NOs: 995 and 1083, respectively;


(zz) SEQ ID NOs: 996 and 1084, respectively;


(aaa) SEQ ID NOs: 997 and 1085, respectively;


(bbb) SEQ ID NOs: 998 and 1086, respectively;


(ccc) SEQ ID NOs: 999 and 1087, respectively;


(ddd) SEQ ID NOs: 1000 and 1088, respectively;


(eee) SEQ ID NOs: 1001 and 1089, respectively;


(fff) SEQ ID NOs: 1002 and 1090, respectively;


(ggg) SEQ ID NOs: 1003 and 1091, respectively;


(hhh) SEQ ID NOs: 1004 and 1092 respectively;


(iii) SEQ ID NOs: 1005 and 1093 respectively;


(jjj) SEQ ID NOs: 1006 and 1094, respectively;


(kkk) SEQ ID NOs: 1007 and 1095, respectively;


(lll) SEQ ID NOs: 1008 and 1096, respectively;


(mmm) SEQ ID NOs: 1009 and 1097, respectively;


(nnn) SEQ ID NOs: 1010 and 1098, respectively;


(ooo) SEQ ID NOs: 1011 and 1099, respectively;


(ppp) SEQ ID NOs: 1012 and 1100, respectively;


(qqq) SEQ ID NOs: 1013 and 1101, respectively;


(rrr) SEQ ID NOs: 1014 and 1102 respectively;


(sss) SEQ ID NOs: 1015 and 1103, respectively;


(ttt) SEQ ID NOs: 1016 and 1104, respectively;


(uuu) SEQ ID NOs: 1017 and 1105, respectively;


(vvv) SEQ ID NOs: 1018 and 1106, respectively;


(www) SEQ ID NOs: 1019 and 1107, respectively;


(xxx) SEQ ID NOs: 1020 and 1108, respectively;


(yyy) SEQ ID NOs: 1021 and 1109, respectively;


(zzz) SEQ ID NOs: 1022 and 1110, respectively;


(aaaa) SEQ ID NOs: 1023 and 1111, respectively;


(bbbb) SEQ ID NOs: 1024 and 1112, respectively;


(cccc) SEQ ID NOs: 1025 and 1113, respectively;


(dddd) SEQ ID NOs: 1026 and 1114, respectively;


(eeee) SEQ ID NOs: 1027 and 1115, respectively;


(ffff) SEQ ID NOs: 1028 and 1116, respectively;


(gggg) SEQ ID NOs: 1029 and 1117, respectively;


(hhhh) SEQ ID NOs: 1030 and 1118, respectively;


(iiii) SEQ ID NOs: 1031 and 1119, respectively; and,


(jjjj) SEQ ID NOs: 1032 and 1120, respectively.


In some embodiments of the RNAi oligonucleotide:


(i) the sense strand comprises the sequence and all of the modifications of 5′-mCs-mU-mC-mA-mA-mG-mG-fA-fU-fU-fU-mC-mA-mG-mU-mU-mA-mU-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 963), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fUs-fAs-fU-fA-mA-fC-mU-mG-fA-mA-mA-mU-fC-mC-mU-mU-mG-mA-mGs-mGs-mG-3′ (SEQ ID NO: 1051), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=Chem. formula 5




embedded image


(ii) the sense strand comprises the sequence and all of the modifications of 5′-mUs-mC-mA-mA-mG-mG-mA-fU-fU-fU-fC-mA-mG-mU-mU-mA-mU-mA-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 964), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fUs-fUs-fA-fU-mA-fA-mC-mU-fG-mA-mA-mA-fU-mC-mC-mU-mU-mG-mAs-mGs-mG-3′ (SEQ ID NO: 1052), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=Chem. formula 5




embedded image


(iii) the sense strand comprises the sequence and all of the modifications of 5′-mAs-mG-mC-mA-mG-mC-mG-fU-fC-fC-fA-mC-mU-mC-mA-mG-mA-mG-mC-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 1006), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fGs-fCs-fU-fC-mU-fG-mA-mG-fU-mG-mG-mA-fC-mG-mC-mU-mG-mC-mUs-mGs-mG-3′ (SEQ ID NO: 1094), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=Chem. formula 5




embedded image


(iv) the sense strand comprises the sequence and all of the modifications of 5′-mAs-mU-mG-mU-mG-mC-mA-fC-fG-fA-fA-mU-mG-mA-mC-mU-mG-mU-mU-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 1018), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fAs-fAs-fC-fA-mG-fU-mC-mA-fU-mU-mC-mG-fU-mG-mC-mA-mC-mA-mUs-mGs-mG-3′ (SEQ ID NO: 1106), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=Chem. formula 5




embedded image


optionally wherein the oligonucleotide is a Dicer substrate.


In an aspect, the invention provides a pharmaceutical composition comprising the RNAi oligonucleotide according to the invention and a pharmaceutically acceptable carrier, delivery agent or excipient.


In an aspect, the invention provides a kit comprising the RNAi oligonucleotide according to the invention, an optional pharmaceutically acceptable carrier, and a package insert comprising instructions for administration to a subject having a disease, disorder or condition associated with NR1H3 expression, optionally for the treatment of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), or systemic lupus erythematosus


In an aspect, the invention provides the use of the RNAi oligonucleotide according to the invention, or the pharmaceutical composition according to the invention, in the manufacture of a medicament for the treatment of a disease, disorder or condition associated with NR1H3 expression, optionally for the treatment of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), or systemic lupus erythematosus, optionally for use in in combination with a second composition or therapeutic agent.





BRIEF DESCRIPTION OF THE DRAWINGS


FIG. 1A provides a drawing of an oligonucleotide comprising a nicked tetraloop structure.



FIG. 1B provides a graph depicting the percent (%) remaining human NR1H3 mRNA in liver of mice exogenously expressing human NR1H3 (hydrodynamic injection model) after treatment with GalNAc-conjugated NR1H3 oligonucleotides. Three days post-dose mice were hydrodynamically injected (HDI) with the human NR1H3 mRNA construct. 18 hours later, livers were collected and human and mouse NR1H3 mRNA levels were measured. Exons indicate the location on the mRNA where the construct targets. Constructs tested in FIG. 1B were selected from the screen described in Example 2. White arrows indicate potential constructs for non-human primate (NHP) studies.



FIG. 2 provides graphs depicting the percentage (%) of remaining human or mouse NR1H3 mRNA in liver of mice exogenously expressing human NR1H3 (hydrodynamic injection model) after treatment with GalNAc-conjugated NR1H3 oligonucleotides designed based on sequences identified using the algorithm described in Example 2. Mice were dosed subcutaneously with 2 mg/kg of the indicated NR1H3-GalNAc construct. Three days post-dose mice were hydrodynamically injected (HDI) with the human NR1H3 mRNA construct. 18 hours later, livers were collected and human and mouse NR1H3 mRNA levels were measured. Exons indicate the location on the mRNA where the construct targets. Benchmark constructs (NR1H3-769 and NR1H3-1469) were selected from prior sequence screening conducted at Dicerna.



FIG. 3 provides a graph depicting the percent (%) remaining human NR1H3 mRNA in liver of mice exogenously expressing human NR1H3 (HDI model) after treatment with GalNAc-conjugated NR1H3 oligonucleotides. Constructs tested in FIG. 3 are a repeat assay validating the constructs tested in FIG. 2. White arrows indicate potential constructs for non-human primate studies.



FIG. 4 provides a graph depicting the percent (%) remaining human NR1H3 mRNA in liver of mice exogenously expressing human NR1H3 (HDI model) after treatment with GalNAc-conjugated NR1H3 oligonucleotides. Constructs tested in FIG. 1B and FIG. 2 were validated and repeated in two assays (experiment 1 and experiment 2) using the same methods. White arrows indicate potential constructs for non-human primate studies.



FIG. 5 provides a schematic depicting the dosing scheme and specimen collection for treatment of non-human primates with GalNAc-conjugated NR1H3 oligonucleotides. 1 mg/kg or 4 mg/kg are dosed once every 4 weeks for four months (Q4W×4). Timing for liver biopsies and blood collection is shown.





DETAILED DESCRIPTION

The liver X receptors α (LXRα; encoded by the NR1H3 gene) and β (LXRβ; encoded by NR1H2 gene) are nuclear receptors that function in the regulation of lipid and cholesterol homeostasis, as well as inflammation (Venkateswaran, A., et al., PROC. NATL. ACAD. SCI. U.S.A, (2000); 97: 12097-102). LXRα is highly expressed in lipid metabolism-related organs such as the liver, small intestine, kidney, spleen, adrenal gland, and adipose tissue, whereas LXRβ expression is distributed ubiquitously. The hypothesis of specific inhibition of LXRα in the hepatocytes to treat NASH-related dyslipidemia is supported by several clinical and pre-clinical observations. Activation of LXRα increases plasma and hepatic TG and plasma LDLc, as was demonstrated in human subjects treated with LXR agonist in a dose-dependent manner (Kirchgessner, T. G., et al., CELL METAB, (2016); 24(2): 223-33). Consistent with this observation, hepatic deletion of LXRα in mice lowers liver fat and reduces plasma triglycerides. (J. CLIN. INVEST. (2012); 122(5): 1688-99.


In addition, hepatic expression of LXRα is significantly upregulated in liver biopsies from NAFLD and NASH patients (Ahn, S. B., et al. DIG. DIS. SCI. (2014); 59: 2975-82). However, avoiding inhibition of LXRα in macrophages is desirable as LXRα activation increases reverse cholesterol transport (RCT) which prevents atherosclerosis (CURR. OPIN. INVESTIG. DRUGS. (2003); 4(9): 1053-8). Taken together, and without being bound by theory, antagonism/inhibition of LXRα specifically in hepatocytes (e.g., via NR1H3-targeted RNAi oligonucleotides) decreases de novo lipogenesis with concomitant preservation of LXRα function in macrophages and stellate cells for their positive roles in preventing inflammation and fibrosis respectively, thus representing a promising approach for treatment of NAFLD and/or NASH. (Higuchi, N., et al., HEPATOL. RES. (2008); 38: 1122-29) (Repa, J. J.; and, Mangelsdorf, D. J. ANNU. REV. CELL DEV. BIOL. (2000); 16: 459-81). This approach may be best managed by a specific and targeted reduction of the NR1H3 expression in the liver while other organs, tissues or cells expressing NR1H3 are left essentially alone. In this sense the current invention may provide an improved modality of treatment given its specific targeting of mRNA production in the liver.


According to some aspects, the disclosure provides oligonucleotides (e.g., RNAi oligonucleotides) that reduce NR1H3 expression in the liver. In some embodiments, the oligonucleotides provided herein are designed to treat diseases associated with NR1H3 expression in the liver, e.g., non-alcoholic fatty liver disease (NAFLD), or non-alcoholic steatohepatitis (NASH). In some respects, the disclosure provides methods of treating a disease associated with NR1H3 expression by reducing NR1H3 expression in cells (e.g., cells of the liver) or in organs (e.g., liver).


Oligonucleotide Inhibitors of NR1H3 Expression
NR1H3 Target Sequences

In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) is targeted to a target sequence comprising a NR1H3 mRNA. In some embodiments, an oligonucleotide described herein is targeted to a target sequence within a NR1H3 mRNA sequence. In some embodiments, the oligonucleotide described herein corresponds to a target sequence within a NR1H3 mRNA sequence. In some embodiments, the oligonucleotide, or a portion, fragment, or strand thereof (e.g., an antisense strand or a guide strand of a double-stranded (ds) RNAi oligonucleotide) binds or anneals to a target sequence comprising NR1H3 mRNA, thereby inhibiting NR1H3 expression.


In some embodiments, the oligonucleotide is targeted to a NR1H3 target sequence for the purpose of inhibiting NR1H3 expression in vivo. In some embodiments, the amount or extent of inhibition of NR1H3 expression by an oligonucleotide targeted to a NR1H3 target sequence correlates with the potency of the oligonucleotide. In some embodiments, the amount or extent of inhibition of NR1H3 expression by an oligonucleotide targeted to a NR1H3 target sequence correlates with the amount or extent of therapeutic benefit in a subject or patient having a disease, disorder or condition associated with NR1H3 expression treated with the oligonucleotide.


Through examination of the nucleotide sequence of mRNAs encoding NR1H3, including mRNAs of multiple different species (e.g., human, cynomolgus monkey, mouse, and rat; see, e.g., Example 2) and as a result of in vitro and in vivo testing (see, e.g., Examples 2-5), it has been discovered that certain nucleotide sequences of NR1H3 mRNA are more amenable than others to oligonucleotide-based inhibition and are thus useful as target sequences for the oligonucleotides herein. In some embodiments, a sense strand of an oligonucleotide (e.g., an RNAi oligonucleotide) described herein comprises a NR1H3 target sequence. In some embodiments, a portion or region of the sense strand of an oligonucleotide described herein (e.g., an RNAi oligonucleotide) comprises a NR1H3 target sequence. In some embodiments, a NR1H3 target sequence comprises, or consists of, a sequence of any one of SEQ ID NOs: 1-384. In some embodiments, a NR1H3 target sequence can consist of one of the sequences set forth in SEQ ID NO: 92, 285, and/or 354.


NR1H3 Targeting Sequences

In some embodiments, the oligonucleotides herein (e.g., RNAi oligonucleotides) have regions of complementarity to NR1H3 mRNA (e.g., within a target sequence of NR1H3 mRNA) for purposes of targeting the NR1H3 mRNA in cells and inhibiting and/or reducing NR1H3 expression. In some embodiments, the oligonucleotides herein comprise a NR1H3 targeting sequence (e.g., an antisense strand or a guide strand of a dsRNAi oligonucleotide) having a region of complementarity that binds or anneals to a NR1H3 target sequence by complementary (Watson-Crick) base pairing. The targeting sequence or region of complementarity is generally of a suitable length and base content to enable binding or annealing of the oligonucleotide (or a strand thereof) to a NR1H3 mRNA for purposes of inhibiting and/or reducing NR1H3 expression. In some embodiments, the targeting sequence or region of complementarity is at least about 12, at least about 13, at least about 14, at least about 15, at least about 16, at least about 17, at least about 18, at least about 19, at least about 20, at least about 21, at least about 22, at least about 23, at least about 24, at least about 25, at least about 26, at least about 27, at least about 28, at least about 29, or at least about 30 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is about 12 to about 30 (e.g., 12 to 30, 12 to 22, 15 to 25, 17 to 21, 18 to 27, 19 to 27, or 15 to 30) nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is about 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 18 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 19 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 20 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 21 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 22 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 23 nucleotides in length. In some embodiments, the targeting sequence or region of complementarity is 24 nucleotides in length. In some embodiments, an oligonucleotide comprises a target sequence or region of complementarity complementary to a sequence of any one of SEQ ID NOs: 1-384. In some embodiments, an oligonucleotide comprises a target sequence or region of complementarity complementary to a sequence of any one of SEQ ID NOs: 1125-1511 and the targeting sequence or region of complementarity is 18 nucleotides in length. In some embodiments, an oligonucleotide comprises a target sequence or region of complementarity complementary to a sequence of any one of SEQ ID NOs: 1-384, and the targeting sequence or region of complementarity is 19 nucleotides in length. In some embodiments, an oligonucleotide comprises a target sequence or region of complementarity complementary to a sequence of any one of SEQ ID NOs: 1125-1511, and the targeting sequence or region of complementarity is 19 nucleotides in length.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or a region of complementarity (e.g., an antisense strand or a guide strand of a double-stranded oligonucleotide) that is fully complementary to a NR1H3 target sequence. In some embodiments, the targeting sequence or region of complementarity is partially complementary to a NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is fully complementary to a NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is partially complementary to a NR1H3 target sequence.


In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is fully complementary to a sequence of any one of SEQ ID NOs: 1-384. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is fully complementary to a sequence of any one of SEQ ID NOs: 1125-1511. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is fully complementary to the sequence set forth in SEQ ID NO: 1409, 1509, 1510 or 1511. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is partially complementary to a sequence of any one of SEQ ID NOs: 1-384. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is partially complementary to a sequence of any one of SEQ ID NOs: 1125-1511. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is partially complementary to the sequence set forth in SEQ ID NO: 1409, 1509, 1510 or 1511.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or region of complementarity that is complementary to a contiguous sequence of nucleotides comprising a NR1H3 mRNA, wherein the contiguous sequence of nucleotides is about 12 to about 30 nucleotides in length (e.g., 12 to 30, 12 to 28, 12 to 26, 12 to 24, 12 to 20, 12 to 18, 12 to 16, 14 to 22, 16 to 20, 18 to 20, or 18 to 19 nucleotides in length). In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is complementary to a contiguous sequence of nucleotides comprising a NR1H3 mRNA, wherein the contiguous sequence of nucleotides is 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or 20 nucleotides in length. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is complementary to a contiguous sequence of nucleotides comprising a NR1H3 mRNA, wherein the contiguous sequence of nucleotides is 19 nucleotides in length. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity that is complementary to a contiguous sequence of nucleotides comprising a NR1H3 mRNA, wherein the contiguous sequence of nucleotides is 20 nucleotides in length.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384. In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, optionally wherein the contiguous sequence of nucleotides is 19 nucleotides in length. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs:1409, 1509, 1510 or 1511, wherein the contiguous sequence of nucleotides is 19 nucleotides in length.


In some embodiments, a targeting sequence or region of complementarity of an oligonucleotide herein (e.g., an RNAi oligonucleotide) is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384. In some embodiments, a targeting sequence or region of complementarity of an oligonucleotide herein (e.g., an RNAi oligonucleotide) is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511. In some embodiments, a targeting sequence or region of complementarity of an oligonucleotide herein (e.g., an RNAi oligonucleotide) is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384 and spans the entire length of an antisense strand. In some embodiments, a targeting sequence or region of complementarity of the oligonucleotide is complementary to a contiguous sequence of nucleotides of SEQ ID NOs: 1-384 and spans a portion of the entire length of an antisense strand. In some embodiments, a targeting sequence or region of complementarity of the oligonucleotide is complementary to a contiguous sequence of nucleotides of SEQ ID NOs: 1125-1511 and spans a portion of the entire length of an antisense strand. In some embodiments, a targeting sequence or region of complementarity of the oligonucleotide is complementary to a contiguous sequence of nucleotides of SEQ ID NOs: 1125-1511 and spans a portion of the entire length of an antisense strand. In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a region of complementarity (e.g., on an antisense strand of a dsRNA) that is at least partially (e.g., fully) complementary to a contiguous stretch of nucleotides spanning nucleotides 1-19 or 1-20 of a sequence as set forth in any one of SEQ ID NOs: 1-384. In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a region of complementarity (e.g., on an antisense strand of a dsRNA) that is at least partially (e.g., fully) complementary to a contiguous stretch of nucleotides spanning nucleotides 1-19 or 1-20 of a sequence as set forth in any one of SEQ ID NOs: 1125-1511.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or region of complementarity having one or more base pair (bp) mismatches with the corresponding NR1H3 target sequence. In some embodiments, the targeting sequence or region of complementarity may have up to about 1, up to about 2, up to about 3, up to about 4, up to about 5, etc. mismatches with the corresponding NR1H3 target sequence provided that the ability of the targeting sequence or region of complementarity to bind or anneal to the NR1H3 mRNA under appropriate hybridization conditions and/or the ability of the oligonucleotide to inhibit NR1H3 expression is maintained. Alternatively, the targeting sequence or region of complementarity may have no more than 1, no more than 2, no more than 3, no more than 4, or no more than 5 mismatches with the corresponding NR1H3 target sequence provided that the ability of the targeting sequence or region of complementarity to bind or anneal to the NR1H3 mRNA under appropriate hybridization conditions and/or the ability of the oligonucleotide to inhibit NR1H3 expression is maintained. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having 1 mismatch with the corresponding target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having 2 mismatches with the corresponding target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having 3 mismatches with the corresponding target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having 4 mismatches with the corresponding target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having 5 mismatches with the corresponding target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having more than one mismatch (e.g., 2, 3, 4, 5 or more mismatches) with the corresponding target sequence, wherein at least 2 (e.g., all) of the mismatches are positioned consecutively (e.g., 2, 3, 4, 5 or more mismatches in a row), or wherein the mismatches are interspersed throughout the targeting sequence or region of complementarity. In some embodiments, the oligonucleotide comprises a targeting sequence or region of complementarity having more than one mismatch (e.g., 2, 3, 4, 5 or more mismatches) with the corresponding target sequence, wherein at least 2 (e.g., all) of the mismatches are positioned consecutively (e.g., 2, 3, 4, 5 or more mismatches in a row), or wherein at least one or more non-mismatched base pair is located between the mismatches, or a combination thereof. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, wherein the targeting sequence or region of complementarity may have up to about 1, up to about 2, up to about 3, up to about 4, up to about 5, etc. mismatches with the corresponding NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, wherein the targeting sequence or region of complementarity may have up to about 1, up to about 2, up to about 3, up to about 4, up to about 5, etc. mismatches with the corresponding NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, wherein the targeting sequence or region of complementarity may have no more than 1, no more than 2, no more than 3, no more than 4, or no more than 5 mismatches with the corresponding NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, wherein the targeting sequence or region of complementarity may have no more than 1, no more than 2, no more than 3, no more than 4, or no more than 5 mismatches with the corresponding NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs:1409, 1509, 1510 or 1511, wherein the targeting sequence or region of complementarity may have up to about 1, up to about 2, up to about 3, up to about 4, up to about 5, etc. mismatches with the corresponding NR1H3 target sequence. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1409, 1509, 1510 or 1511, wherein the targeting sequence or region of complementarity may have no more than 1, no more than 2, no more than 3, no more than 4, or no more than 5 mismatches with the corresponding NR1H3 target sequence.


Types of Oligonucleotides

A variety of oligonucleotide types and/or structures are useful for targeting NR1H3 in the methods herein including, but not limited to, RNAi oligonucleotides, antisense oligonucleotides (ASOs), miRNAs, etc. Any of the oligonucleotide types described herein or elsewhere are contemplated for use as a framework to incorporate a NR1H3 targeting sequence herein for the purposes of inhibiting NR1H3 expression.


In some embodiments, the oligonucleotides herein inhibit NR1H3 expression by engaging with RNA interference (RNAi) pathways upstream or downstream of Dicer involvement. For example, RNAi oligonucleotides have been developed with each strand having sizes of about 19-25 nucleotides with at least one 3′-overhang of 1 to 5 nucleotides (see, e.g., U.S. Pat. No. 8,372,968). Longer oligonucleotides also have been developed that are processed by Dicer to generate active RNAi products (see, e.g., U.S. Pat. No. 8,883,996). Further work produced extended dsRNAs where at least one end of at least one strand is extended beyond a duplex targeting region, including structures where one of the strands includes a thermodynamically stabilizing tetraloop structure (see, e.g., U.S. Pat. Nos. 8,513,207 and 8,927,705, as well as Intl. Patent Application Publication No. WO 2010/033225). Such structures may include single-stranded (ss) extensions (on one or both sides of the molecule) as well as double-stranded (ds) extensions.


In some embodiments, the oligonucleotides herein engage with the RNAi pathway downstream of the involvement of Dicer (e.g., Dicer cleavage). In some embodiments, the oligonucleotides described herein are Dicer substrates. In some embodiments, upon endogenous Dicer processing, double-stranded nucleic acids of 19-23 nucleotides in length capable of reducing NR1H3 expression are produced. In some embodiments, the oligonucleotide has an overhang (e.g., of 1, 2, or 3 nucleotides in length) in the 3′ end of the sense strand. In some embodiments, the oligonucleotide (e.g., siRNA) comprises a 21-nucleotide guide strand that is antisense to a target RNA and a complementary passenger strand, in which both strands anneal to form a 19-bp duplex and 2 nucleotide overhangs at either or both 3′ ends. Longer oligonucleotide designs also are available including oligonucleotides having a guide strand of 23 nucleotides and a passenger strand of 21 nucleotides, where there is a blunt end on the right side of the molecule (3′ end of passenger strand/5′ end of guide strand) and a two nucleotide 3′-guide strand overhang on the left side of the molecule (5′ end of the passenger strand/3′ end of the guide strand). In such molecules, there is a 21 bp duplex region. See, e.g., U.S. Pat. Nos. 9,012,138; 9,012,621 and 9,193,753.


In some embodiments, the oligonucleotides herein comprise sense and antisense strands that are both in the range of about 17 to 36 (e.g., 17 to 36, 20 to 25, or 21-23) nucleotides in length. In some embodiments, the oligonucleotides described herein comprise an antisense strand of 19-30 nucleotides in length and a sense strand of 19-50 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand. In some embodiments, an oligonucleotide herein comprises a sense and antisense strand that are both in the range of about 19-22 nucleotides in length. In some embodiments, the sense and antisense strands are of equal length. In some embodiments, an oligonucleotide comprises sense and antisense strands, such that there is a 3′-overhang on either the sense strand or the antisense strand, or both the sense and antisense strand. In some embodiments, for oligonucleotides that have sense and antisense strands that are both in the range of about 21-23 nucleotides in length, a 3′-overhang on the sense, antisense, or both sense and antisense strands is 1 or 2 nucleotides in length. In some embodiments, the oligonucleotide has a guide strand of 22 nucleotides and a passenger strand of 20 nucleotides, where there is a blunt end on the right side of the molecule (3′ end of passenger strand/5′ end of guide strand) and a 2 nucleotide 3′-guide strand overhang on the left side of the molecule (5′ end of the passenger strand/3′ end of the guide strand). In such molecules, there is a 20 bp duplex region.


Other oligonucleotide designs for use with the compositions and methods herein include: 16-mer siRNAs (see, e.g., NUCLEIC ACIDS IN CHEMISTRY AND BIOLOGY. Blackburn (ed.), Royal Society of Chemistry, 2006), shRNAs (e.g., having 19 bp or shorter stems; see, e.g., Moore et al. METHODS MOL. BIOL. (2010); 629: 141-158), blunt siRNAs (e.g., of 19 bps in length; see, e.g., Kraynack & Baker RNA (2006); 12: 163-176), asymmetrical siRNAs (aiRNA; see, e.g., Sun et al. NAT. BIOTECHNOL. (2008); 26: 1379-1382), asymmetric shorter-duplex siRNA (see, e.g., Chang et al. MOL. THER. (2009); 17: 725-32), fork siRNAs (see, e.g., Hohjoh FEBS LETT. (2004); 557: 193-198), ss siRNAs (Elsner NAT. BIOTECHNOL. (2012); 30: 1063), dumbbell-shaped circular siRNAs (see, e.g., Abe et al. J. AM. CHEM. SOC. (2007); 129: 15108-09), and small internally segmented interfering RNA (siRNA; see, e.g., Bramsen et al. NUCLEIC ACIDS RES. (2007); 35: 5886-97). Further non-limiting examples of an oligonucleotide structures that may be used in some embodiments to reduce or inhibit the expression of NR1H3 are microRNA (miRNA), short hairpin RNA (shRNA) and short siRNA (see, e.g., Hamilton et al. EMBO J. (2002); 21: 4671-79; see also, US Patent Application Publication No. 2009/0099115).


Still, in some embodiments, an oligonucleotide for reducing or inhibiting NR1H3 expression herein is single-stranded (ss). Such structures may include but are not limited to single-stranded RNAi molecules. Recent efforts have demonstrated the activity of ss RNAi molecules (see, e.g., Matsui et al. MOL. THER. (2016); 24: 946-55). However, in some embodiments, oligonucleotides herein are antisense oligonucleotides (ASOs). An antisense oligonucleotide is a single-stranded oligonucleotide that has a nucleobase sequence which, when written in the 5′ to 3′ direction, comprises the reverse complement of a targeted segment of a particular nucleic acid and is suitably modified (e.g., as a gapmer) so as to induce RNaseH-mediated cleavage of its target RNA in cells or (e.g., as a mixmer) so as to inhibit translation of the target mRNA in cells. ASOs for use herein may be modified in any suitable manner known in the art including, for example, as shown in U.S. Pat. No. 9,567,587 (including, e.g., length, sugar moieties of the nucleobase (pyrimidine, purine), and alterations of the heterocyclic portion of the nucleobase). Further, ASOs have been used for decades to reduce expression of specific target genes (see, e.g., Bennett et al. ANNU. REV. PHARMACOL. (2017); 57: 81-105).


In some embodiments, the antisense oligonucleotide shares a region of complementarity with NR1H3 mRNA. In some embodiments, the antisense oligonucleotide targets the human NR1H3 mRNA (Homo sapiens NR1H3, mRNA, transcript variant 5, NCBI Reference Sequence: NM_001251935.1). In some embodiments, the antisense oligonucleotide is 15-50 nucleotides in length. In some embodiments, the antisense oligonucleotide is 15-25 nucleotides in length. In some embodiments, the antisense oligonucleotide is 22 nucleotides in length. In some embodiments, the antisense oligonucleotide is complementary to any one of SEQ ID NOs: 1-384. In some embodiments, the antisense oligonucleotide is complementary to any one of SEQ ID NOs: 1125-1511. In some embodiments, the antisense oligonucleotide is at least 15 contiguous nucleotides in length. In some embodiments, the antisense oligonucleotide is at least 19 contiguous nucleotides in length. In some embodiments, the antisense oligonucleotide is at least 20 contiguous nucleotides in length. In some embodiments, the antisense oligonucleotide differs by 1, 2, or 3 nucleotides from the target sequence.


Double-Stranded Oligonucleotides

In some aspects, the disclosure provides double-stranded (ds) RNAi oligonucleotides for targeting NR1H3 mRNA and inhibiting NR1H3 expression (e.g., via the RNAi pathway) comprising a sense strand (also referred to herein as a passenger strand) and an antisense strand (also referred to herein as a guide strand). In some embodiments, the sense strand and antisense strand are separate strands and are not covalently linked. In some embodiments, the sense strand and antisense strand are covalently linked. In some embodiments, the sense strand and antisense strand form a duplex region, wherein the sense strand and antisense strand, or a portion thereof, binds with one another in a complementary fashion (e.g., by Watson-Crick base pairing).


In some embodiments, the sense strand has a first region (R1) and a second region (R2), wherein R2 comprises a first subregion (S1), a tetraloop (L) or triloop (triL), and a second subregion (S2), wherein L or triL is located between S1 and S2, and wherein S1 and S2 form a second duplex (D2). D2 may have various length. In some embodiments, D2 is about 1-6 bp in length. In some embodiments, D2 is 2-6, 3-6, 4-6, 5-6, 1-5, 2-5, 3-5, or 4-5 bp in length. In some embodiments, D2 is 1, 2, 3, 4, 5, or 6 bp in length. In some embodiments, D2 is 6 bp in length. In some embodiments, R1 of the sense strand and the antisense strand form a first duplex (D1). In some embodiments, D1 is at least about 15 (e.g., at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, or at least 21) nucleotides in length. In some embodiments, D1 is in the range of about 12 to 30 nucleotides in length (e.g., 12 to 30, 12 to 27, 15 to 22, 18 to 22, 18 to 25, 18 to 27, 18 to 30, or 21 to 30 nucleotides in length). In some embodiments, D1 is at least 12 nucleotides in length (e.g., at least 12, at least 15, at least 20, at least 25, or at least 30 nucleotides in length). In some embodiments, D1 is 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides in length. In some embodiments, D1 is 20 nucleotides in length. In some embodiments, D1 comprising sense strand and antisense strand does not span the entire length of the sense strand and/or antisense strand. In some embodiments, D1 comprising the sense strand and antisense strand spans the entire length of either the sense strand or antisense strand or both. In certain embodiments, D1 comprising the sense strand and antisense strand spans the entire length of both the sense strand and the antisense strand.


In some embodiments, an oligonucleotide provided herein comprises a sense strand having a sequence of any one of SEQ ID NOs: 1-384 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 385-768. In some embodiments, an oligonucleotide provided herein comprises a sense strand having a sequence of any one of SEQ ID NOs: 1125-1511 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 1512-1515.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand having a sequence of any one of SEQ ID NOs: 769-856 or 1519-1552 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 857-944 as is arranged in Tables 3 and 4.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand comprising nucleotide sequences selected from:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand comprising nucleotide sequences selected from:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively.


In some embodiments, the sense strand comprises the sequence of SEQ ID NO: 786 and the antisense strand comprises the sequence of SEQ ID NO: 874.


In some embodiments, the sense strand comprises the sequence of SEQ ID NO: 787 and the antisense strand comprises the sequence of SEQ ID NO: 875.


In some embodiments, the sense strand comprises the sequence of SEQ ID NO: 1537 and the antisense strand comprises the sequence of SEQ ID NO: 929.


In some embodiments, the sense strand comprises the sequence of SEQ ID NO: 813 and the antisense strand comprises the sequence of SEQ ID NO: 901.


It should be appreciated that, in some embodiments, sequences presented in the Sequence Listing may be referred to in describing the structure of an oligonucleotide (e.g., a dsRNAi oligonucleotide) or other nucleic acid. In such embodiments, the actual oligonucleotide or other nucleic acid may have one or more alternative nucleotides (e.g., an RNA counterpart of a DNA nucleotide or a DNA counterpart of an RNA nucleotide) and/or one or more modified nucleotides and/or one or more modified internucleotide linkages and/or one or more other modification when compared with the specified sequence while retaining essentially same or similar complementary properties as the specified sequence.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a 25-nucleotide sense strand and a 27-nucleotide antisense strand that when acted upon by a Dicer enzyme results in an antisense strand that is incorporated into the mature RISC. In some embodiments, the 25-nucleotide sense strand comprises a sequence selected from SEQ ID NOs: 1-384. In some embodiments, the 27-nucleotide antisense strand comprises a sequence selected from SEQ ID NOs: 385-768. In some embodiments, the sense strand of the oligonucleotide is longer than 27 nucleotides (e.g., 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, or 50 nucleotides). In some embodiments, the sense strand of the oligonucleotide is longer than 25 nucleotides (e.g., 26, 27, 28, 29, or 30 nucleotides). In some embodiments, the sense strand of the oligonucleotide comprises a nucleotide sequence selected from SEQ ID NOs: 769-856, wherein the nucleotide sequence is longer than 27 nucleotides (e.g., 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, or 50 nucleotides).). In some embodiments, the sense strand of the oligonucleotide comprises a nucleotide sequence selected from SEQ ID NOs: 1519-1552, wherein the nucleotide sequence is longer than 27 nucleotides (e.g., 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, or 50 nucleotides). In some embodiments, the sense strand of the oligonucleotide comprises a nucleotide sequence selected from SEQ ID NOs: 769-856, wherein the nucleotide sequence is longer than 25 nucleotides (e.g., 26, 27, 28, 29 or 30 nucleotides).


In some embodiments, oligonucleotides herein (e.g., RNAi oligonucleotides) have one 5′ end that is thermodynamically less stable when compared to the other 5′ end. In some embodiments, an asymmetric oligonucleotide is provided that includes a blunt end at the 3′ end of a sense strand and a 3′-overhang at the 3′ end of an antisense strand. In some embodiments, the 3′-overhang on the antisense strand is about 1-8 nucleotides in length (e.g., 1, 2, 3, 4, 5, 6, 7, or 8 nucleotides in length). In some embodiments, the oligonucleotide has an overhang comprising two (2) nucleotides on the 3′ end of the antisense (guide) strand. However, other overhangs are possible. In some embodiments, an overhang is a 3′-overhang comprising a length of between 1 and 6 nucleotides, optionally 1 to 5, 1 to 4, 1 to 3, 1 to 2, 2 to 6, 2 to 5, 2 to 4, 2 to 3, 3 to 6, 3 to 5, 3 to 4, 4 to 6, 4 to 5, 5 to 6 nucleotides, or 1, 2, 3, 4, 5, or 6 nucleotides. However, in some embodiments, the overhang is a 5′-overhang comprising a length of between 1 and 6 nucleotides, optionally 1 to 5, 1 to 4, 1 to 3, 1 to 2, 2 to 6, 2 to 5, 2 to 4, 2 to 3, 3 to 6, 3 to 5, 3 to 4, 4 to 6, 4 to 5, 5 to 6 nucleotides, or 1, 2, 3, 4, 5, or 6 nucleotides. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, and a 5′-overhang comprising a length of between 1 and 6 nucleotides. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, and a 5′-overhang comprising a length of between 1 and 6 nucleotides. In some embodiments, the oligonucleotide comprises a sense strand comprising a nucleotide sequence selected from SEQ ID NOs: 769-856, wherein the oligonucleotide comprises a 5′-overhang comprising a length of between 1 and 6 nucleotides. In some embodiments, the oligonucleotide comprises a sense strand comprising a nucleotide sequence selected from SEQ ID NOs: 1519-1552, wherein the oligonucleotide comprises a 5′-overhang comprising a length of between 1 and 6 nucleotides. In some embodiments, the oligonucleotide comprises an antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 857-944, wherein the oligonucleotide comprises a 5′-overhang comprising a length of between 1 and 6 nucleotides. In some embodiments, the oligonucleotide comprises a sense strand comprising a nucleotide sequence selected from SEQ ID NOs: 769-856 and antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 857-944, wherein the oligonucleotide comprises a 5′-overhang comprising a length of between 1 and 6 nucleotides. In some embodiments, the oligonucleotide comprises a sense strand comprising a nucleotide sequence selected from SEQ ID NOs: 1519-1552 and antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 857-944, wherein the oligonucleotide comprises a 5′-overhang comprising a length of between 1 and 6 nucleotides.


In some embodiments, two (2) terminal nucleotides on the 3′ end of an antisense strand are modified. In some embodiments, the two (2) terminal nucleotides on the 3′ end of the antisense strand are complementary with the target mRNA (e.g., NR1H3 mRNA). In some embodiments, the two (2) terminal nucleotides on the 3′ end of the antisense strand are not complementary with the target mRNA. In some embodiments, the two (2) terminal nucleotides on the 3′ end of the antisense strand of an oligonucleotide herein are unpaired. In some embodiments, the two (2) terminal nucleotides on the 3′ end of the antisense strand of an oligonucleotide herein comprise an unpaired GG. In some embodiments, the two (2) terminal nucleotides on the 3′ end of an antisense strand of an oligonucleotide herein are not complementary to the target mRNA. In some embodiments, two (2) terminal nucleotides on each 3′ end of an oligonucleotide are GG. In some embodiments, one or both of the two (2) terminal GG nucleotides on each 3′ end of an oligonucleotide herein is not complementary with the target mRNA. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, wherein the two (2) terminal nucleotides on the 3′ end of the antisense strand of the oligonucleotide herein comprises an unpaired GG. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, wherein the two (2) terminal nucleotides on the 3′ end of the antisense strand of the oligonucleotide herein comprises an unpaired GG. In some embodiments, the oligonucleotide comprises an antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 857-944, wherein the two (2) terminal nucleotides on the 3′ end of the antisense strand of the oligonucleotide comprises an unpaired GG. In some embodiments, the oligonucleotide comprises a sense strand comprising a nucleotide sequence selected from SEQ ID NOs: 769-856 and antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 857-944, wherein the two (2) terminal nucleotides on the 3′ end of the antisense strand of the oligonucleotide comprises an unpaired GG. In some embodiments, the oligonucleotide comprises a sense strand comprising a nucleotide sequence selected from SEQ ID NOs: 1519-1552 and antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 857-944, wherein the two (2) terminal nucleotides on the 3′ end of the antisense strand of the oligonucleotide comprises an unpaired GG.


In some embodiments, there is one or more (e.g., 1, 2, 3, 4, or 5) mismatch(s) between a sense and antisense strand comprising an oligonucleotide herein (e.g., an RNAi oligonucleotide). If there is more than one mismatch between a sense and antisense strand, they may be positioned consecutively (e.g., 2, 3 or more in a row), or interspersed throughout the region of complementarity. In some embodiments, the 3′ end of the sense strand comprises one or more mismatches. In some embodiments, two (2) mismatches are incorporated at the 3′ end of the sense strand. In some embodiments, base mismatches, or destabilization of segments at the 3′ end of the sense strand of an oligonucleotide herein improves or increases the potency of the oligonucleotide. In some embodiments, the sense and antisense strands of an oligonucleotide herein comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein there is one or more (e.g., 1, 2, 3, 4 or 5) mismatch(s) between the sense and antisense strands.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand comprising nucleotide sequences selected from:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


wherein there is one or more (e.g., 1, 2, 3, 4, or 5) mismatch(s) between the sense and antisense strands.


Antisense Strands

In some embodiments, an antisense strand of an oligonucleotide herein (e.g., an RNAi oligonucleotide) is referred to as a “guide strand”. For example, an antisense strand that engages with RNA-induced silencing complex (RISC) and binds to an Argonaute protein such as Ago2, or engages with or binds to one or more similar factors, and directs silencing of a target gene, as the antisense strand is referred to as a guide strand. In some embodiments, a sense strand comprising a region of complementary to a guide strand is referred to herein as a “passenger strand.” In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises an antisense strand of up to about 50 nucleotides in length (e.g., up to 50, up to 40, up to 35, up to 30, up to 27, up to 25, up to 21, up to 19, up to 17, or up to 12 nucleotides in length).


In some embodiments, an oligonucleotide comprises an antisense strand of at least about 12 nucleotides in length (e.g., at least 12, at least 15, at least 19, at least 21, at least 22, at least 25, at least 27, at least 30, at least 35, or at least 38 nucleotides in length). In some embodiments, an oligonucleotide comprises an antisense strand in a range of about 12 to about 40 (e.g., 12 to 40, 12 to 36, 12 to 32, 12 to 28, 15 to 40, 15 to 36, 15 to 32, 15 to 28, 17 to 22, 17 to 25, 19 to 27, 19 to 30, 20 to 40, 22 to 40, 25 to 40, or 32 to 40) nucleotides in length. In some embodiments, an oligonucleotide comprises antisense strand of 15 to 30 nucleotides in length. In some embodiments, an antisense strand of any one of the oligonucleotides disclosed herein is of 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, or 40 nucleotides in length. In some embodiments, an oligonucleotide comprises an antisense strand of 22 nucleotides in length.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) for targeting NR1H3 comprises an antisense strand comprising or consisting of a sequence as set forth in any one of SEQ ID NOs: 385-768. In some embodiments, an oligonucleotide herein comprises an antisense strand comprising at least about 12 (e.g., at least 12, at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22, or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 385-768. In some embodiments, an oligonucleotide disclosed herein for targeting NR1H3 comprises an antisense strand comprising or consisting of a sequence as set forth in any one of SEQ ID NOs: 857-944. In some embodiments, an oligonucleotide herein comprises an antisense strand comprising at least about 12 (e.g., at least 12, at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22, or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 857-944. In some embodiments, an oligonucleotide disclosed herein for targeting NR1H3 comprises an antisense strand comprising or consisting of a sequence as set forth in any one of SEQ ID NOs: 874, 875, 929, and 901. In some embodiments, an oligonucleotide herein comprises an antisense strand comprising at least about 12 (e.g., at least 12, at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22 or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 874, 875, 929, and 901.


In some embodiments, an oligonucleotide herein comprises an antisense strand comprising a nucleotide sequence selected from SEQ ID NOs: 1512-1515.


Sense Strands

In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) for targeting NR1H3 mRNA and inhibiting NR1H3 expression comprises a sense strand sequence as set forth in any one of SEQ ID NOs: 1-384. In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) for targeting NR1H3 mRNA and inhibiting NR1H3 expression comprises a sense strand sequence as set forth in any one of SEQ ID NOs: 1125-1511. In some embodiments, an oligonucleotide herein has a sense strand comprised of at least about 12 (e.g., at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22, or at least 23) contiguous nucleotides of a sequence as set forth in in any one of SEQ ID NOs: 1-384. In some embodiments, an oligonucleotide herein has a sense strand comprised of at least about 12 (e.g., at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22 or at least 23) contiguous nucleotides of a sequence as set forth in in any one of SEQ ID NOs: 1125-1511. In some embodiments, an oligonucleotide disclosed herein for targeting NR1H3 mRNA and inhibiting NR1H3 expression comprises a sense strand sequence as set forth in any one of SEQ ID NOs: 769-856. In some embodiments, an oligonucleotide disclosed herein for targeting NR1H3 mRNA and inhibiting NR1H3 expression comprises a sense strand sequence as set forth in any one of SEQ ID NOs: 1519-1552. In some embodiments, an oligonucleotide herein has a sense strand comprised of least about 12 (e.g., at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22, or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 769-856. In some embodiments, an oligonucleotide herein has a sense strand comprised of least about 12 (e.g., at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22, or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 1519-1552. In some embodiments, an oligonucleotide disclosed herein for targeting NR1H3 mRNA and inhibiting NR1H3 expression comprises a sense strand sequence as set forth in any one of SEQ ID NOs: 786, 787, 1537, and 813. In some embodiments, an oligonucleotide herein has a sense strand that comprise at least about 12 (e.g., at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22, or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 786, 787, 1537, and 813. In some embodiments, an oligonucleotide disclosed herein for targeting NR1H3 mRNA and inhibiting NR1H3 expression comprises a sense strand sequence as set forth in any one of SEQ ID NOs: 1409, 1509, 1510 and 1511. In some embodiments, an oligonucleotide herein has a sense strand that comprise at least about 12 (e.g., at least 13, at least 14, at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, at least 21, at least 22 or at least 23) contiguous nucleotides of a sequence as set forth in any one of SEQ ID NOs: 1409, 1509, 1510 and 1511.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand (or passenger strand) of up to about 50 nucleotides in length (e.g., up to 50, up to 40, up to 36, up to 30, up to 27, up to 25, up to 21, up to 19, up to 17, or up to 12 nucleotides in length). In some embodiments, an oligonucleotide herein comprises a sense strand of at least about 12 nucleotides in length (e.g., at least 12, at least 15, at least 19, at least 21, at least 25, at least 27, at least 30, at least 36, or at least 38 nucleotides in length). In some embodiments, an oligonucleotide herein comprises a sense strand in a range of about 12 to about 50 (e.g., 12 to 50, 12 to 40, 12 to 36, 12 to 32, 12 to 28, 15 to 40, 15 to 36, 15 to 32, 15 to 28, 17 to 21, 17 to 25, 19 to 27, 19 to 30, 20 to 40, 22 to 40, 25 to 40, or 32 to 40) nucleotides in length. In some embodiments, an oligonucleotide herein comprises a sense strand of 15 to 50 nucleotides in length. In some embodiments, an oligonucleotide herein comprises a sense strand of 18 to 36 nucleotides in length. In some embodiments, an oligonucleotide herein comprises a sense strand of 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, or 50 nucleotides in length. In some embodiments, an oligonucleotide herein comprises a sense strand of 36 nucleotides in length.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand comprising a stem-loop structure at the 3′ end of the sense strand. In some embodiments, the stem-loop is formed by intrastrand base pairing. In some embodiments, a sense strand comprises a stem-loop structure at its 5′ end. In some embodiments, the stem of the stem-loop comprises a duplex of 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, or 14 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 2 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 3 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 4 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 5 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 6 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 7 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 8 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 9 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 10 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 11 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 12 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 13 nucleotides in length. In some embodiments, the stem of the stem-loop comprises a duplex of 14 nucleotides in length.


In some embodiments, a stem-loop provides the oligonucleotide protection against degradation (e.g., enzymatic degradation), facilitates or improves targeting and/or delivery to a target cell, tissue, or organ (e.g., the liver), or both. For example, in some embodiments, the loop of a stem-loop is comprised of nucleotides comprising one or more modifications that facilitate, improve, or increase targeting to a target mRNA (e.g., a NR1H3 mRNA), inhibition of target gene expression (e.g., NR1H3 expression), and/or delivery, uptake, and/or penetrance into a target cell, tissue, or organ (e.g., the liver), or a combination thereof. In some embodiments, the stem-loop itself or modification(s) to the stem-loop do not affect or do not substantially affect the inherent gene expression inhibition activity of the oligonucleotide, but facilitates, improves, or increases stability (e.g., provides protection against degradation) and/or delivery, uptake, and/or penetrance of the oligonucleotide to a target cell, tissue, or organ (e.g., the liver). In certain embodiments, an oligonucleotide herein comprises a sense strand comprising (e.g., at its 3′ end) a stem-loop set forth as: S1-L-S2, in which S1 is complementary to S2, and in which L forms a single-stranded loop of linked nucleotides between S1 and S2 of up to about 10 nucleotides in length (e.g., 3, 4, 5, 6, 7, 8, 9 or 10 nucleotides in length). In some embodiments, the loop (L) is 3 nucleotides in length. In some embodiments, the loop (L) is 4 nucleotides in length. In some embodiments, the loop (L) is 5 nucleotides in length. In some embodiments, the loop (L) is 6 nucleotides in length. In some embodiments, the loop (L) is 7 nucleotides in length. In some embodiments, the loop (L) is 8 nucleotides in length. In some embodiments, the loop (L) is 9 nucleotides in length. In some embodiments, the loop (L) is 10 nucleotides in length.


In some embodiments, the tetraloop comprises the sequence 5′-GAAA-3′. In some embodiments, the stem loop comprises the sequence 5′-GCAGCCGAAAGGCUGC-3′ (SEQ ID NO: 1121).


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, and the oligonucleotide comprises a sense strand comprising (e.g., at its 3′ end) a stem-loop set forth as: S1-L-S2, in which S1 is complementary to S2, and in which L forms a single-stranded loop between S1 and S2 of up to about 10 nucleotides in length (e.g., 3, 4, 5, 6, 7, 8, 9, or 10 nucleotides in length). In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, and the oligonucleotide comprises a sense strand comprising (e.g., at its 3′ end) a stem-loop set forth as: S1-L-S2, in which S1 is complementary to S2, and in which L forms a single-stranded loop between S1 and S2 of up to about 10 nucleotides in length (e.g., 3, 4, 5, 6, 7, 8, 9, or 10 nucleotides in length). In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, and the oligonucleotide comprises a sense strand comprising (e.g., at its 3′ end) a stem-loop set forth as: S1-L-S2, in which S1 is complementary to S2, and in which L forms a single-stranded loop between S1 and S2 of 4 nucleotides in length.


In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384, and the oligonucleotide comprises a sense strand comprising (e.g., at its 3′ end) a stem-loop set forth as: S1-L-S2, in which S1 is complementary to S2, and in which L forms a single-stranded loop between S1 and S2 of 4 nucleotides in length. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511, and the oligonucleotide comprises a sense strand comprising (e.g., at its 3′ end) a stem-loop set forth as: S1-L-S2, in which S1 is complementary to S2, and in which L forms a single-stranded loop between S1 and S2 of 4 nucleotides in length.


In some embodiments, a loop (L) of a stem-loop having the structure S1-L-S2 as described herein is a triloop. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384 and a triloop. In some embodiments, the triloop comprises ribonucleotides, deoxyribonucleotides, modified nucleotides, ligands (e.g., delivery ligands), and combinations thereof. In some embodiments, a loop (L) of a stem-loop having the structure S1-L-S2 as described herein is a triloop. In some embodiments, the oligonucleotide comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511 and a triloop. In some embodiments, the triloop comprises ribonucleotides, deoxyribonucleotides, modified nucleotides, ligands (e.g., delivery ligands), and combinations thereof.


In some embodiments, a loop (L) of a stem-loop having the structure S1-L-S2 as described above is a tetraloop. In some embodiments, an oligonucleotide herein comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1-384 and a tetraloop. In some embodiments, the tetraloop comprises ribonucleotides, deoxyribonucleotides, modified nucleotides, ligands (e.g., delivery ligands), and combinations thereof. In some embodiments, a loop (L) of a stem-loop having the structure S1-L-S2 as described above is a tetraloop. In some embodiments, an oligonucleotide herein comprises a targeting sequence or a region of complementary that is complementary to a contiguous sequence of nucleotides of any one of SEQ ID NOs: 1125-1511 and a tetraloop. In some embodiments, the tetraloop comprises ribonucleotides, deoxyribonucleotides, modified nucleotides, ligands (e.g., delivery ligands), and combinations thereof.


Duplex Length

In some embodiments, a duplex formed between a sense and antisense strand is at least 12 (e.g., at least 15, at least 16, at least 17, at least 18, at least 19, at least 20, or at least 21) nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is in the range of 12-30 nucleotides in length (e.g., 12 to 30, 12 to 27, 12 to 22, 15 to 25, 18 to 30, 18 to 22, 18 to 25, 18 to 27, 18 to 30, 19 to 30, or 21 to 30 nucleotides in length). In some embodiments, a duplex formed between a sense and antisense strand is 12, 13, 14, 15, 16, 17, 18, 19, 29, 21, 22, 23, 24, 25, 26, 27, 28, 29, or 30 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 12 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 13 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 14 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 15 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 16 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 17 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 18 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 19 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 20 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 21 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 22 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 23 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 24 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 25 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 26 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 27 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 28 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 29 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand is 30 nucleotides in length. In some embodiments, a duplex formed between a sense and antisense strand does not span the entire length of the sense strand and/or antisense strand. In some embodiments, a duplex between a sense and antisense strand spans the entire length of either the sense or antisense strands. In some embodiments, a duplex between a sense and antisense strand spans the entire length of both the sense strand and the antisense strand. In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein a duplex formed between a sense and antisense strand is in the range of 12-30 nucleotides in length (e.g., 12 to 30, 12 to 27, 12 to 22, 15 to 25, 18 to 30, 18 to 22, 18 to 25, 18 to 27, 18 to 30, 19 to 30, or 21 to 30 nucleotides in length)


In some embodiments, a duplex between a sense and antisense strand spans the entire length of both the sense strand and the antisense strand. In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


wherein a duplex formed between a sense and antisense strand is in the range of 12-30 nucleotides in length (e.g., 12 to 30, 12 to 27, 12 to 22, 15 to 25, 18 to 30, 18 to 22, 18 to 25, 18 to 27, 18 to 30, 19 to 30, or 21 to 30 nucleotides in length)


Oligonucleotide Termini

In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the termini of either or both strands comprise a blunt end. In some embodiments, an oligonucleotide herein comprises sense and antisense strands that are separate strands which form an asymmetric duplex region having an overhang at the 3′ terminus of the antisense strand. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the termini of either or both strands comprise an overhang comprising one or more nucleotides. In some embodiments, the one or more nucleotides comprising the overhang are unpaired nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the 3′ termini of the sense strand and the 5′ termini of the antisense strand comprise a blunt end. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the 5′ termini of the sense strand and the 3′ termini of the antisense strand comprise a blunt end.


In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the 3′ terminus of either or both strands comprise a 3′-overhang comprising one or more nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the sense strand comprises a 3′-overhang comprising one or more nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 3′-overhang comprising one or more nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein both the sense strand and the antisense strand comprises a 3′-overhang comprising one or more nucleotides.


In some embodiments, the 3′-overhang is about one (1) to twenty (20) nucleotides in length (e.g., about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or about 20 nucleotides in length). In some embodiments, the 3′-overhang is about one (1) to nineteen (19), one (1) to eighteen (18), one (1) to seventeen (17), one (1) to sixteen (16), one (1) to fifteen (15), one (1) to fourteen (14), one (1) to thirteen (13), one (1) to twelve (12), one (1) to eleven (11), one (1) to ten (10), one (1) to nine (9), one (1) to eight (8), one (1) to seven (7), one (1) to six (6), one (1) to five (5), one (1) to four (4), one (1) to three (3), or about one (1) to two (2) nucleotides in length. In some embodiments, the 3′-overhang is (1) nucleotide in length. In some embodiments, the 3′-overhang is two (2) nucleotides in length. In some embodiments, the 3′-overhang is three (3) nucleotides in length. In some embodiments, the 3′-overhang is four (4) nucleotides in length. In some embodiments, the 3′-overhang is five (5) nucleotides in length. In some embodiments, the 3′-overhang is six (6) nucleotides in length. In some embodiments, the 3′-overhang is seven (7) nucleotides in length. In some embodiments, the 3′-overhang is eight (8) nucleotides in length. In some embodiments, the 3′-overhang is nine (9) nucleotides in length. In some embodiments, the 3′-overhang is ten (10) nucleotides in length. In some embodiments, the 3′-overhang is eleven (11) nucleotides in length. In some embodiments, the 3′-overhang is twelve (12) nucleotides in length. In some embodiments, the 3′-overhang is thirteen (13) nucleotides in length. In some embodiments, the 3′-overhang is fourteen (14) nucleotides in length. In some embodiments, the 3′-overhang is fifteen (15) nucleotides in length. In some embodiments, the 3′-overhang is sixteen (16) nucleotides in length. In some embodiments, the 3′-overhang is seventeen (17) nucleotides in length. In some embodiments, the 3′-overhang is eighteen (18) nucleotides in length. In some embodiments, the 3′-overhang is nineteen (19) nucleotides in length. In some embodiments, the 3′-overhang is twenty (20) nucleotides in length.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 3′-overhang, wherein the sense and antisense strands of the oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


and wherein the antisense strand comprises a 3′-overhang about one (1) to twenty (20) nucleotides in length (e.g., about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or about 20 nucleotides in length), optionally wherein the 3′-overhang is two (2) nucleotides in length.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 3′-overhang, wherein the sense and antisense strands of the oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


and wherein the antisense strand comprises a 3′-overhang about one (1) to twenty (20) nucleotides in length (e.g., about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or about 20 nucleotides in length), optionally wherein the 3′-overhang is two (2) nucleotides in length.


In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the 5′ terminus of either or both strands comprise a 5′-overhang comprising one or more nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the sense strand comprises a 5′-overhang comprising one or more nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 5′-overhang comprising one or more nucleotides. In some embodiments, an oligonucleotide herein comprises a sense strand and an antisense strand, wherein both the sense strand and the antisense strand comprises a 5′-overhang comprising one or more nucleotides.


In some embodiments, the 5′-overhang is about one (1) to twenty (20) nucleotides in length (e.g., about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or about 20 nucleotides in length). In some embodiments, the 5′-overhang is about one (1) to nineteen (19), one (1) to eighteen (18), one (1) to seventeen (17), one (1) to sixteen (16), one (1) to fifteen (15), one (1) to fourteen (14), one (1) to thirteen (13), one (1) to twelve (12), one (1) to eleven (11), one (1) to ten (10), one (1) to nine (9), one (1) to eight (8), one (1) to seven (7), one (1) to six (6), one (1) to five (5), one (1) to four (4), one (1) to three (3), or about one (1) to two (2) nucleotides in length. In some embodiments, the 5′-overhang is (1) nucleotide in length. In some embodiments, the 5′-overhang is two (2) nucleotides in length. In some embodiments, the 5′-overhang is three (3) nucleotides in length. In some embodiments, the 5′-overhang is four (4) nucleotides in length. In some embodiments, the 5′-overhang is five (5) nucleotides in length. In some embodiments, the 5′-overhang is six (6) nucleotides in length. In some embodiments, the 5′-overhang is seven (7) nucleotides in length. In some embodiments, the 5′-overhang is eight (8) nucleotides in length. In some embodiments, the 5′-overhang is nine (9) nucleotides in length. In some embodiments, the 5′-overhang is ten (10) nucleotides in length. In some embodiments, the 5′-overhang is eleven (11) nucleotides in length. In some embodiments, the 5′-overhang is twelve (12) nucleotides in length. In some embodiments, the 5′-overhang is thirteen (13) nucleotides in length. In some embodiments, the 5′-overhang is fourteen (14) nucleotides in length. In some embodiments, the 5′-overhang is fifteen (15) nucleotides in length. In some embodiments, the 5′-overhang is sixteen (16) nucleotides in length. In some embodiments, the 5′-overhang is seventeen (17) nucleotides in length. In some embodiments, the 5′-overhang is eighteen (18) nucleotides in length. In some embodiments, the 5′-overhang is nineteen (19) nucleotides in length. In some embodiments, the 5′-overhang is twenty (20) nucleotides in length.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 5′-overhang, wherein the sense and antisense strands of the oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


and wherein the antisense strand comprises a 3′-overhang about one (1) to twenty (20) nucleotides in length (e.g., about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or about 20 nucleotides in length), optionally wherein the 3′-overhang is two (2) nucleotides in length.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 5′-overhang, wherein the sense and antisense strands of the oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


and wherein the antisense strand comprises a 5′-overhang about one (1) to twenty (20) nucleotides in length (e.g., about 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, or about 20 nucleotides in length), optionally wherein the 5′-overhang is two (2) nucleotides in length.


In some embodiments, one or more (e.g., 2, 3, 4, 5, or more) nucleotides comprising the 3′ terminus or 5′ terminus of a sense and/or antisense strand are modified. For example, in some embodiments, one or two terminal nucleotides of the 3′ terminus of the antisense strand are modified. In some embodiments, the last nucleotide at the 3′ terminus of an antisense strand is modified, e.g., comprises 2′ modification, e.g., a 2′-O-methoxyethyl. In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at positions 1-7, 12-27 and 31-36 modified with 2′OMe. In some embodiments, the last one or two terminal nucleotides at the 3′ terminus of an antisense strand are complementary with the target. In some embodiments, the last one or two nucleotides at the 3′ terminus of the antisense strand are not complementary with the target.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the 3′ terminus of the sense strand comprises a stem-loop described herein (see FIG. 1A) and the 3′ terminus of the antisense strand comprises a 3′-overhang described herein. In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand that form a nicked tetraloop structure described herein (see FIG. 1A), wherein the 3′ terminus of the sense strand comprises a stem-loop, wherein the loop is a tetraloop described herein, and wherein the 3′ terminus of the antisense strand comprises a 3′-overhang described herein (see FIG. 1A). In some embodiments, the 3′-overhang is two (2) nucleotides in length. In some embodiments, the two (2) nucleotides comprising the 3′-overhang both comprise guanine (G) nucleobases. Typically, one or both of the nucleotides comprising the 3′-overhang of the antisense strand are not complementary with the target mRNA.


Oligonucleotide Modifications

In some embodiments, an oligonucleotide described herein (e.g., an RNAi oligonucleotide) comprises a modification. Oligonucleotides (e.g., RNAi oligonucleotides) may be modified in various ways to improve or control specificity, stability, delivery, bioavailability, resistance from nuclease degradation, immunogenicity, base-pairing properties, RNA distribution and cellular uptake and other features relevant to therapeutic or research use.


In some embodiments, the modification is a modified sugar. In some embodiments, the modification is a 5′-terminal phosphate group. In some embodiments, the modification is a modified internucleotide linkage. In some embodiments, the modification is a modified base. In some embodiments, an oligonucleotide described herein can comprise any one of the modifications described herein or any combination thereof. For example, in some embodiments, an oligonucleotide described herein comprises at least one modified sugar, a 5′-terminal phosphate group, at least one modified internucleotide linkage, and at least one modified base. In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein the oligonucleotide comprises at least one modified sugar, a 5′-terminal phosphate group, at least one modified internucleotide linkage, and at least one modified base.


In some embodiments, an oligonucleotide described herein comprises at least one modified sugar, a 5′-terminal phosphate group, at least one modified internucleotide linkage, and at least one modified base. In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


wherein the oligonucleotide comprises at least one modified sugar, a 5′-terminal phosphate group, at least one modified internucleotide linkage, and at least one modified base.


The number of modifications on an oligonucleotide (e.g., an RNAi oligonucleotide) and the position of those nucleotide modifications may influence the properties of an oligonucleotide. For example, oligonucleotides may be delivered in vivo by conjugating them to or encompassing them in a lipid nanoparticle (LNP) or similar carrier. However, when an oligonucleotide is not protected by an LNP or similar carrier, it may be advantageous for at least some of the nucleotides to be modified. Accordingly, in some embodiments, all or substantially all the nucleotides of an oligonucleotide are modified. In some embodiments, more than half of the nucleotides are modified. In some embodiments, less than half of the nucleotides are modified. In some embodiments, the sugar moiety of all nucleotides comprising the oligonucleotide is modified at the 2′ position. The modifications may be reversible or irreversible. In some embodiments, an oligonucleotide as disclosed herein has a number and type of modified nucleotides sufficient to cause the desired characteristics (e.g., protection from enzymatic degradation, capacity to target a desired cell after in vivo administration, and/or thermodynamic stability).


Sugar Modifications

In some embodiments, an oligonucleotide described herein (e.g., an RNAi oligonucleotide) comprises a modified sugar. In some embodiments, a modified sugar (also referred herein to a sugar analog) includes a modified deoxyribose or ribose moiety in which, for example, one or more modifications occur at the 2′, 3′, 4′ and/or 5′ carbon position of the sugar. In some embodiments, a modified sugar may also include non-natural alternative carbon structures such as those present in locked nucleic acids (“LNA”; see, e.g., Koshkin et al. TETRAHEDON (1998); 54: 3607-30), unlocked nucleic acids (“UNA”; see, e.g., Snead et al. MOL. THER-NUCL. ACIDS (2013); 2: e103) and bridged nucleic acids (“BNA”; see, e.g., Imanishi & Obika CHEM. COMMUN. (CAMB) (2002); 21: 1653-59).


In some embodiments, a nucleotide modification in a sugar comprises a 2′-modification. In some embodiments, a 2′-modification may be 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-fluoro (2′-F), 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA) or 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA). In some embodiments, the modification is 2′-F, 2′-OMe or 2′-MOE. In some embodiments, a modification in a sugar comprises a modification of the sugar ring, which may comprise modification of one or more carbons of the sugar ring. For example, a modification of a sugar of a nucleotide may comprise a 2′-oxygen of a sugar is linked to a 1′-carbon or 4′-carbon of the sugar, or a 2′-oxygen is linked to the 1′-carbon or 4′-carbon via an ethylene or methylene bridge. In some embodiments, a modified nucleotide has an acyclic sugar that lacks a 2′-carbon to 3′-carbon bond. In some embodiments, a modified nucleotide has a thiol group, e.g., in the 4′ position of the sugar.


In some embodiments, an oligonucleotide (e.g., an RNAi oligonucleotide) described herein comprises at least about 1 modified nucleotide (e.g., at least 1, at least 5, at least 10, at least 15, at least 20, at least 25, at least 30, at least 35, at least 40, at least 45, at least 50, at least 55, at least 60, or more). In some embodiments, the sense strand of the oligonucleotide comprises at least about 1 modified nucleotide (e.g., at least 1, at least 5, at least 10, at least 15, at least 20, at least 25, at least 30, at least 35, or more). In some embodiments, the antisense strand of the oligonucleotide comprises at least about 1 modified nucleotide (e.g., at least 1, at least 5, at least 10, at least 15, at least 20, or more).


In some embodiments, all the nucleotides of the sense strand of the oligonucleotide are modified. In some embodiments, all the nucleotides of the antisense strand of the oligonucleotide are modified. In some embodiments, all the nucleotides of the oligonucleotide (i.e., both the sense strand and the antisense strand) are modified. In some embodiments, the modified nucleotide comprises a 2′-modification (e.g., a 2′-F or 2′-OMe, 2′-MOE, and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid).


In some embodiments, the disclosure provides oligonucleotides having different modification patterns. In some embodiments, an oligonucleotide herein comprises a sense strand having a modification pattern as set forth in the Examples and Sequence Listing and an antisense strand having a modification pattern as set forth in the Examples and Sequence Listing.


In some embodiments, an oligonucleotide disclosed herein (e.g., an RNAi oligonucleotide) comprises an antisense strand having nucleotides that are modified with 2′-F. In some embodiments, an oligonucleotide herein comprises an antisense strand comprising nucleotides that are modified with 2′-F and 2′-OMe. In some embodiments, an oligonucleotide disclosed herein comprises a sense strand having nucleotides that are modified with 2′-F. In some embodiments, an oligonucleotide disclosed herein comprises a sense strand comprises nucleotides that are modified with 2′-F and 2′-OMe.


In some embodiments, an oligonucleotide described herein comprises a sense strand with about 10-15%, 10%, 11%, 12%, 13%, 14%, or 15% of the nucleotides of the sense strand comprising a 2′-fluoro modification. In some embodiments, about 11% of the nucleotides of the sense strand comprise a 2-fluoro modification. In some embodiments, an oligonucleotide described herein comprises an antisense strand with about 25-35%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, or 35% of the nucleotides of the antisense strand comprising a 2′-fluoro modification. In some embodiments, about 32% of the nucleotides of the antisense strand comprise a 2′-fluoro modification. In some embodiments, the oligonucleotide has about 15-25%, 15%, 16%, 17%, 18%, 19%, 20%, 21%, 22%, 23%, 24%, or 25% of its nucleotides comprising a 2′-fluoro modification. In some embodiments, about 19% of the nucleotides in the dsRNAi oligonucleotide comprise a 2′-fluoro modification.


In some embodiments, one or more of positions 8, 9, 10, or 11 of the sense strand is modified with a 2′—F group. In some embodiments, one or more of positions 3, 8, 9, 10, 12, 13, and 17 of the sense strand is modified with a 2′—F group. In some embodiments, one or more of positions 2, 3, 4, 5, 7, 10, and 14 of the antisense strand is modified with a 2′—F group. In some embodiments, one or more of positions 2, 3, 4, 5, 7, 8, 10, 14, 16, and 19 is modified with a 2′—F group. In some embodiments, the sugar moiety at each of nucleotides at positions 1-7 and 12-20 in the sense strand is modified with a 2′-OMe. In some embodiments, the sugar moiety at each of nucleotides at positions 1-7, 12-27, and 31-36 in the sense strand is modified with a 2′-OMe. In some embodiments, the sugar moiety at each of nucleotides at positions 6, 9, 11-13, 15, 17, 18, and 20-22 in the sense strand is modified with a 2′-OMe.


In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein one or more of positions 8, 9, 10 or 11 of the sense strand is modified with a 2′—F group.


In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively, and;


(d) SEQ ID NOs: 813 and 901, respectively,


wherein one or more of positions 8, 9, 10, or 11 of the sense strand is modified with a 2′—F group.


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 5, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 1, 2, 5, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 4, 5, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 1, 2, 3, 5, 7, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 3, 4, 5, 7, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 1, 2, 3, 5, 10, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 3, 4, 5, 10, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 3, 5, 7, 10, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 3, 4, 5, 7, 10, and 14 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety of each of the nucleotides at positions 2, 3, 4, 5, 7, 8, 10, 14, 16, and 19 of the antisense strand modified with 2′-F and the sugar moiety of each of the remaining nucleotides of the antisense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety at position 1, position 2, position 3, position 4, position 5, position 6, position 7, position 8, position 9, position 10, position 11, position 12, position 13, position 14, position 15, position 16, position 17, position 18, position 19, position 20, position 21, or position 22 modified with 2′-F.


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety at position 1, position 2, position 3, position 4, position 5, position 6, position 7, position 8, position 9, position 10, position 11, position 12, position 13, position 14, position 15, position 16, position 17, position 18, position 19, position 20, position 21, or position 22 modified with 2′-OMe.


In some embodiments, an oligonucleotide provided herein comprises an antisense strand having the sugar moiety at position 1, position 2, position 3, position 4, position 5, position 6, position 7, position 8, position 9, position 10, position 11, position 12, position 13, position 14, position 15, position 16, position 17, position 18, position 19, position 20, position 21, or position 22 modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at positions 8-11 modified with 2′-F. In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at positions 3, 8, 9, 10, 12, 13 and 17 modified with 2′-F. In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at positions 1-7 and 12-17 or 12-20 modified with 2′OMe. In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety of each of the nucleotides at positions 1-7 and 12-17 or 12-20 of the sense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA). In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at positions 1-2, 4-7, 11, 14-16, and 18-20 modified with 2′OMe. In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety of each of the nucleotides at positions 1-2, 4-7, 11, 14-16, and 18-20 of the sense strand modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at position 1, position 2, position 3, position 4, position 5, position 6, position 7, position 8, position 9, position 10, position 11, position 12, position 13, position 14, position 15, position 16, position 17, position 18, position 19, position 20, position 21, position 22, position 23, position 24, position 25, position 26, position 27, position 28, position 29, position 30, position 31, position 32, position 33, position 34, position 35, or position 36 modified with 2′-F. In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at position 1, position 2, position 3, position 4, position 5, position 6, position 7, position 8, position 9, position 10, position 11, position 12, position 13, position 14, position 15, position 16, position 17, position 18, position 19, position 20, position 21, position 22, position 23, position 24, position 25, position 26, position 27, position 28, position 29, position 30, position 31, position 32, position 33, position 34, position 35, or position 36 modified with 2′-OMe.


In some embodiments, an oligonucleotide provided herein comprises a sense strand having the sugar moiety at position 1, position 2, position 3, position 4, position 5, position 6, position 7, position 8, position 9, position 10, position 11, position 12, position 13, position 14, position 15, position 16, position 17, position 18, position 19, position 20, position 21, position 22, position 23, position 24, position 25, position 26, position 27, position 28, position 29, position 30, position 31, position 32, position 33, position 34, position 35, or position 36 modified with a modification selected from the group consisting of 2′-O-propargyl, 2′-O-propylamin, 2′-amino, 2′-ethyl, 2′-aminoethyl (EA), 2′-O-methyl (2′-OMe), 2′-O-methoxyethyl (2′-MOE), 2′-O-[2-(methylamino)-2-oxoethyl] (2′-O-NMA), and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid (2′-FANA).


5′-Terminal Phosphate

In some embodiments, an oligonucleotide described herein (e.g., an RNAi oligonucleotide) comprises a sense strand and an antisense strand, wherein the antisense strand comprises a 5′-terminal phosphate. In some embodiments, 5′-terminal phosphate groups of an RNAi oligonucleotide enhance the interaction with Ago2. However, oligonucleotides comprising a 5′-phosphate group may be susceptible to degradation via phosphatases or other enzymes, which can limit their performance and/or bioavailability in vivo. In some embodiments, an oligonucleotide herein includes analogs of 5′ phosphates that are resistant to such degradation. In some embodiments, the phosphate analog is oxymethylphosphonate, vinylphosphonate or malonylphosphonate, or a combination thereof. In certain embodiments, the 5′ terminus of an oligonucleotide strand is attached to chemical moiety that mimics the electrostatic and steric properties of a natural 5′-phosphate group (“phosphate mimic”). In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein the oligonucleotide comprises a 5′-terminal phosphate, optionally a 5′-terminal phosphate analog.


In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


wherein the oligonucleotide comprises a 5′-terminal phosphate, optionally a 5′-terminal phosphate analog.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) has a phosphate analog at a 4′-carbon position of the sugar (referred to as a “4′-phosphate analog”). See, e.g., Intl. Patent Application Publication No. WO 2018/045317. In some embodiments, an oligonucleotide herein comprises a 4′-phosphate analog at a 5′-terminal nucleotide. In some embodiments, a phosphate analog is an oxymethylphosphonate, in which the oxygen atom of the oxymethyl group is bound to the sugar moiety (e.g., at its 4′-carbon) or analog thereof. In other embodiments, a 4′-phosphate analog is a thiomethylphosphonate or an aminomethylphosphonate, in which the sulfur atom of the thiomethyl group or the nitrogen atom of the amino methyl group is bound to the 4′-carbon of the sugar moiety or analog thereof. In certain embodiments, a 4′-phosphate analog is an oxymethylphosphonate. In some embodiments, an oxymethylphosphonate is represented by the formula —O—CH2—PO(OH)2, —O—CH2—PO(OR)2, or —O—CH2—PO(OH)(R), in which R is independently selected from —H, —CH3, an alkyl group, —CH2CH2CN, —CH2OCOC(CH3)3, —CH2OCH2CH2Si(CH3)3 or a protecting group. In certain embodiments, the alkyl group is —CH2CH3. More typically, R is independently selected from H, —CH3 or —CH2CH3. In some embodiment, R is —CH3. In some embodiments, the 4′-phosphate analog is 5′-methoxyphosphonate-4′-oxy.


In some embodiments, an oligonucleotide provided herein comprises an antisense strand comprising a 4′-phosphate analog at the 5′-terminal nucleotide, wherein 5′-terminal nucleotide comprises the following structure (Chem. formula 1).




text missing or illegible when filed


5′-methoxyphosphonate-4′-oxy-2′-O-methyluridine phosphorothioate [MePhosphonate-40-mUs]


Modified Internucleotide Linkage

In some embodiments, an oligonucleotide provided herein (e.g., a RNAi oligonucleotide) comprises a modified internucleotide linkage. In some embodiments, phosphate modifications or substitutions result in an oligonucleotide that comprises at least about 1 (e.g., at least 1, at least 2, at least 3, or at least 5) modified internucleotide linkage. In some embodiments, any one of the oligonucleotides disclosed herein comprises about 1 to about 10 (e.g., 1 to 10, 2 to 8, 4 to 6, 3 to 10, 5 to 10, 1 to 5, 1 to 3, or 1 to 2) modified internucleotide linkages. In some embodiments, any one of the oligonucleotides disclosed herein comprises 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 modified internucleotide linkages.


A modified internucleotide linkage may be a phosphorodithioate linkage, a phosphorothioate linkage, a phosphotriester linkage, a thionoalkylphosphonate linkage, a thionalkylphosphotriester linkage, a phosphoramidite linkage, a phosphonate linkage or a boranophosphate linkage. In some embodiments, at least one modified internucleotide linkage of any one of the oligonucleotides as disclosed herein is a phosphorothioate linkage.


In some embodiments, an oligonucleotide provided herein (e.g., a RNAi oligonucleotide) has a phosphorothioate linkage between one or more of positions 1 and 2 of the sense strand, positions 1 and 2 of the antisense strand, positions 2 and 3 of the antisense strand, positions 3 and 4 of the antisense strand, positions 20 and 21 of the antisense strand, and positions 21 and 22 of the antisense strand. In some embodiments, the oligonucleotide described herein has a phosphorothioate linkage between each of positions 1 and 2 of the sense strand, positions 1 and 2 of the antisense strand, positions 2 and 3 of the antisense strand, positions 20 and 21 of the antisense strand, and positions 21 and 22 of the antisense strand. In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein the oligonucleotide comprises a modified internucleotide linkage.


In some embodiments, the oligonucleotide described herein has a phosphorothioate linkage between each of positions 1 and 2 of the sense strand, positions 1 and 2 of the antisense strand, positions 2 and 3 of the antisense strand, positions 20 and 21 of the antisense strand, and positions 21 and 22 of the antisense strand. In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively, and;


(d) SEQ ID NOs: 813 and 901, respectively,


wherein the oligonucleotide comprises a modified internucleotide linkage.


Base Modifications

In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotides) comprises one or more modified nucleobases. In some embodiments, modified nucleobases (also referred to herein as base analogs) are linked at the 1′ position of a nucleotide sugar moiety. In certain embodiments, a modified nucleobase is a nitrogenous base. In some embodiments, a modified nucleobase does not contain nitrogen atom. See, e.g., US Patent Application Publication No. 2008/0274462. In some embodiments, a modified nucleotide comprises a universal base. In some embodiments, a modified nucleotide does not contain a nucleobase (abasic). In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein the oligonucleotide comprises one or more modified nucleobases.


In some embodiments, a modified nucleotide comprises a universal base. In some embodiments, a modified nucleotide does not contain a nucleobase (abasic). In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


wherein the oligonucleotide comprises one or more modified nucleobases.


In some embodiments, a universal base is a heterocyclic moiety located at the 1′ position of a nucleotide sugar moiety in a modified nucleotide, or the equivalent position in a nucleotide sugar moiety substitution, that, when present in a duplex, can be positioned opposite more than one type of base without substantially altering structure of the duplex. In some embodiments, compared to a reference single-stranded nucleic acid (e.g., oligonucleotide) that is fully complementary to a target nucleic acid (e.g., a NR1H3 mRNA), a single-stranded nucleic acid containing a universal base forms a duplex with the target nucleic acid that has a lower Tm than a duplex formed with the complementary nucleic acid. In some embodiments, when compared to a reference single-stranded nucleic acid in which the universal base has been replaced with a base to generate a single mismatch, the single-stranded nucleic acid containing the universal base forms a duplex with the target nucleic acid that has a higher Tm than a duplex formed with the nucleic acid comprising the mismatched base.


Non-limiting examples of universal-binding nucleotides include, but are not limited to, inosine, 1-β-D-ribofuranosyl-5-nitroindole and/or 1-β-D-ribofuranosyl-3-nitropyrrole (see, US Patent Application Publication No. 2007/0254362; Van Aerschot et al. NUCLEIC ACIDS RES. (1995); 23: 4363-4370; Loakes et al. NUCLEIC ACIDS RES. (1995); 23: 2361-66; and Loakes & Brown NUCLEIC ACIDS RES. (1994); 22: 4039-43).


Targeting Ligands

In some embodiments, it is desirable to target an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) to one or more cells or cell type, tissues, organs, or anatomical regions or compartments. Such a strategy may help to avoid undesirable effects and/or to avoid undue loss of the oligonucleotide to cells, tissues, organs, or anatomical regions or compartments that would not benefit from the oligonucleotide or its effects (e.g., inhibition or reduction of NR1H3 expression). Accordingly, in some embodiments, oligonucleotides disclosed herein (e.g., RNAi oligonucleotides) are modified to facilitate targeting and/or delivery to particular cells or cell types, tissues, organs, or anatomical regions or compartments (e.g., to facilitate delivery of the oligonucleotide to the liver). In some embodiments, an oligonucleotide comprises at least one nucleotide (e.g., 1, 2, 3, 4, 5, 6, or more nucleotides) conjugated to one or more targeting ligand(s). In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein the oligonucleotide comprises a targeting ligand conjugated to at least one nucleotide.


In some embodiments, an oligonucleotide comprises at least one nucleotide (e.g., 1, 2, 3, 4, 5, 6, or more nucleotides) conjugated to one or more targeting ligand(s). In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively, and;


(d) SEQ ID NOs: 813 and 901, respectively,


wherein the oligonucleotide comprises a targeting ligand conjugated to at least one nucleotide.


In some embodiments, the targeting ligand comprises a carbohydrate, amino sugar, cholesterol, peptide, polypeptide, protein, or part of a protein (e.g., an antibody or antibody fragment), or lipid. In certain embodiments, the targeting ligand is a carbohydrate comprising at least one GalNAc moiety.


In some embodiments, 1 or more (e.g., 1, 2, 3, 4, 5, or 6) nucleotides of an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) are each conjugated to a separate targeting ligand (e.g., a GalNAc moiety). In some embodiments, 2 to 4 nucleotides of an oligonucleotide are each conjugated to a separate targeting ligand. In some embodiments, targeting ligands are conjugated to 2 to 4 nucleotides at either ends of the sense or antisense strand (e.g., targeting ligands are conjugated to a 2 to 4 nucleotide overhang or extension on the 5′ or 3′ terminus of the sense or antisense strand) such that the targeting ligands resemble bristles of a toothbrush and the oligonucleotide resembles a toothbrush. For example, an oligonucleotide may comprise a stem-loop at either the 5′ or 3′ terminus of the sense strand and 1, 2, 3, or 4 nucleotides of the loop of the stem may be individually conjugated to a targeting ligand. In some embodiments, an oligonucleotide provided by the disclosure (e.g., a RNAi oligonucleotide) comprises a stem-loop at the 3′ terminus of the sense strand, wherein the loop of the stem-loop comprises a triloop or a tetraloop, and wherein the 3 or 4 nucleotides comprising the triloop or tetraloop, respectively, are individually conjugated to a targeting ligand. In some embodiments, an oligonucleotide provided by the disclosure (e.g., a RNAi oligonucleotide) comprises a stem-loop at the 3′ terminus of the sense strand, wherein the loop of the stem-loop comprises a tetraloop, and wherein 3 nucleotides of the tetraloop are individually conjugated to a targeting ligand.


GalNAc is a high affinity carbohydrate ligand for the asialoglycoprotein receptor (ASGPR), which is primarily expressed on the surface of hepatocyte cells and has a major role in binding, internalizing and subsequent clearing circulating glycoproteins that contain terminal galactose or GalNAc residues (asialoglycoproteins). Conjugation (either indirect or direct) of GalNAc moieties to oligonucleotides of the instant disclosure can be used to target these oligonucleotides to the ASGPR expressed on cells. In some embodiments, an oligonucleotide of the instant disclosure (e.g., an RNAi oligonucleotide) is conjugated to at least one or more GalNAc moieties, wherein the GalNAc moieties target the oligonucleotide to an ASGPR expressed on human liver cells (e.g., human hepatocytes). In some embodiments, the GalNAc moiety target the oligonucleotide to the liver.


In some embodiments, an oligonucleotide of the instant disclosure (e.g., an RNAi oligonucleotide) is conjugated directly or indirectly to a monovalent GalNAc moiety. In some embodiments, the oligonucleotide is conjugated directly or indirectly to more than one monovalent GalNAc (i.e., is conjugated to 2, 3, or 4 monovalent GalNAc moieties and is typically conjugated to 3 or 4 monovalent GalNAc moieties). In some embodiments, an oligonucleotide is conjugated to one or more bivalent GalNAc, trivalent GalNAc or tetravalent GalNAc moieties. In some embodiments, a bivalent, trivalent or tetravalent GalNAc moiety is conjugated to an oligonucleotide via a branched linker. In some embodiments, a monovalent GalNAc moiety is conjugated to a first nucleotide and a bivalent, trivalent, or tetravalent GalNAc moiety is conjugated to a second nucleotide via a branched linker.


In some embodiments, one (1) or more (e.g., 1, 2, 3, 4, 5, or 6) nucleotides of an oligonucleotide described herein (e.g., an RNAi oligonucleotide) are each conjugated to a GalNAc moiety. In some embodiments, two (2) to four (4) nucleotides of a tetraloop are each conjugated to a separate GalNAc moiety. In some embodiments, one (1) to three (3) nucleotides of a triloop are each conjugated to a separate GalNAc moiety. In some embodiments, targeting ligands are conjugated to two (2) to four (4) nucleotides at either ends of the sense or antisense strand (e.g., ligands are conjugated to a two (2) to four (4) nucleotide overhang or extension on the 5′ or 3′ terminus of the sense or antisense strand) such that the GalNAc moieties resemble bristles of a toothbrush and the oligonucleotide resembles a toothbrush. In some embodiments, GalNAc moieties are conjugated to a nucleotide of the sense strand. For example, three (3) or four (4) GalNAc moieties can be conjugated to nucleotides in the tetraloop of the sense strand where each GalNAc moiety is conjugated to one (1) nucleotide.


In some embodiments, an oligonucleotide described herein (e.g., an RNAi oligonucleotide) comprises a tetraloop, wherein the tetraloop (L) is any combination of adenine (A) and guanine (G) nucleotides. In some embodiments, the tetraloop (L) comprises a monovalent GalNAc moiety attached to any one or more guanine (G) nucleotides of the tetraloop via any linker described herein, as depicted below (X=heteroatom) in Chem. formula 2:




text missing or illegible when filed


In some embodiments, the tetraloop (L) has a monovalent GalNAc attached to any one or more adenine nucleotides of the tetraloop via any linker described herein, as depicted below (X=heteroatom) in Chem. formula 3:




text missing or illegible when filed


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide) comprises a monovalent GalNAc moiety attached to a guanine (G) nucleotide referred to as [ademG-GalNAc] or 2′-aminodiethoxymethanol-Guanine-GalNAc, as depicted below in Chem. formula 4:




embedded image


In some embodiments, an oligonucleotide herein comprises a monovalent GalNAc moiety attached to an adenine nucleotide, referred to as [ademA-GalNAc] or 2′-aminodiethoxymethanol-Adenine-GalNAc, as depicted below Chem. formula 5:




embedded image


An example of such conjugation is shown below for a loop comprising from 5′ to 3′ the nucleotide sequence GAAA (L=linker, X=heteroatom). Such a loop may be present, for example, at positions 27-30 of a sense strand provided herein. In the Chem. formula 6 is used to describe an attachment point to the oligonucleotide strand.




embedded image


Appropriate methods or chemistry (e.g., click chemistry) can be used to link a targeting ligand to a nucleotide. In some embodiments, a targeting ligand is conjugated to a nucleotide comprising an oligonucleotide herein (e.g., an RNAi oligonucleotide) using a click linker. In some embodiments, an acetal-based linker is used to conjugate a targeting ligand to a nucleotide of any one of the oligonucleotides described herein. Acetal-based linkers are disclosed, for example, in Intl. Patent Application Publication No. WO2016/100401. In some embodiments, the linker is a labile linker. However, in other embodiments, the linker is stable. An example is shown below for a loop comprising from 5′ to 3′ the nucleotides GAAA, in which GalNAc moieties are attached to nucleotides of the loop using an acetal linker. Such a loop may be present, for example, at positions 27-30 of the any one of the sense strands. In the Chem. formula 7 is an attachment point to the oligonucleotide strand.




embedded image


embedded image


As mentioned, various appropriate methods or chemistry synthetic techniques (e.g., click chemistry) can be used to link a targeting ligand to a nucleotide. In some embodiments, a targeting ligand is conjugated to a nucleotide using a click linker. In some embodiments, an acetal-based linker is used to conjugate a targeting ligand to a nucleotide of any one of the oligonucleotides described herein. Acetal-based linkers are disclosed, for example, in Intl. Patent Application Publication No. WO 2016/100401. In some embodiments, the linker is a labile linker. However, in other embodiments, the linker is a stable linker.


In some embodiments, a duplex extension (e.g., of up to 3, 4, 5, or 6 bp in length) is provided between a targeting ligand (e.g., a GalNAc moiety) and the oligonucleotide. In some embodiments, the oligonucleotides herein (e.g., RNAi oligonucleotides) do not have a GalNAc conjugated thereto.


In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


wherein the oligonucleotide comprises at least one GalNAc moiety conjugated to a nucleotide.


In some embodiments, the sense and antisense strands of an oligonucleotide comprise nucleotides sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively,


wherein the oligonucleotide comprises at least one GalNAc moiety conjugated to a nucleotide.


Exemplary Oligonucleotides for Reducing NR1H3 Expression

In some embodiments, the NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression provided by the disclosure comprise a sense strand and an antisense strand, wherein all nucleotides comprising the sense strand and antisense strand are modified, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length. In some embodiments, the 5′-terminal nucleotide of the antisense strand comprises 5′-methoxyphosphonate-4′-oxy-2′-O-methyluridine [MePhosphonate-4O-mU], as described herein. In some embodiments, the 5′-terminal nucleotide of the antisense strand comprises a phosphorothioate linkage. In some embodiments, the antisense strand and the sense strand comprise one or more 2′-fluoro (2′-F) and 2′-O-methyl (2′-OMe) modified nucleotides and at least one phosphorothioate linkage. In some embodiments, the antisense strand comprises four (4) phosphorothioate linkages and the sense strand comprises one (1) phosphorothioate linkage. In some embodiments, the antisense strand comprises five (5) phosphorothioate linkages and the sense strand comprises one (1) phosphorothioate linkage.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand having a sequence of any one of SEQ ID NOs: 1-384 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 385-768.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand having a sequence of any one of SEQ ID NOs: 769-856 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 857-944.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand having a sequence of any one of SEQ ID NOs: 1519-1552 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 857-944.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) comprises a sense strand having a sequence of any one of SEQ ID NOs: 945-1032 and an antisense strand comprising a complementary sequence selected from SEQ ID NOs: 1033-1120.


In some embodiments, an oligonucleotide provided herein (e.g., and RNAi oligonucleotide) for reducing NR1H3 expression comprises:


a sense strand comprising a 2′-F modified nucleotide at positions 8-11, a 2′-OMe modified nucleotide at positions 1-7, 12-27, and 31-36, a GalNAc-conjugated nucleotide at position 28, 29 and 30; and a phosphorothioate linkage between positions 1 and 2;


an antisense strand comprising a 2′-F modified nucleotide at positions 2, 3, 4, 5, 7, 10 and 14, a 2′-OMe at positions 1, 6, 8, 9, 11-13, and 15-22, a phosphorothioate linkage between positions 1 and 2, positions 2 and 3, positions 3 and 4, positions 20 and 21, and positions 21 and 22, and a 5′-terminal nucleotide at position 1 comprising a 4′-phosphate analog, optionally wherein the 5′-terminal nucleotide comprises 5′-methoxyphosphonate-4′-oxy-2′-O-methyluridine [MePhosphonate-4O-mU]; wherein positions 1-20 of the antisense strand form a duplex region with positions 1-20 of the sense strand, wherein positions 21-36 of the sense strand form a stem-loop, wherein positions 27-30 form the loop of the stem-loop, optionally wherein positions 27-30 comprise a tetraloop, wherein positions 21 and 22 of the antisense strand comprise an overhang, and wherein the sense strand and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively,


In some embodiments, the NR1H3-targeting dsRNAi oligonucleotides for reducing NR1H3 expression comprise:


a sense strand comprising a 2′-F modified nucleotide at positions 8-11, a 2′-OMe modified nucleotide at positions 1-7, 12-27, and 31-36, a GalNAc-conjugated nucleotide at position 28, 29 and 30; and a phosphorothioate linkage between positions 1 and 2;


an antisense strand comprising a 2′-F modified nucleotide at positions 2, 3, 4, 5, 7, 10 and 14, a 2′-OMe at positions 1, 6, 8, 9, 11-13, and 15-22, a phosphorothioate linkage between positions 1 and 2, positions 2 and 3, positions 3 and 4, positions 20 and 21, and positions 21 and 22, and a 5′-terminal nucleotide at position 1 comprising a 4′-phosphate analog, optionally wherein the 5′-terminal nucleotide comprises 5′-methoxyphosphonate-4′-oxy-2′-O-methyluridine [MePhosphonate-4O-mU]; wherein positions 1-20 of the antisense strand form a duplex region with positions 1-20 of the sense strand, wherein positions 21-36 of the sense strand form a stem-loop, wherein positions 27-30 form the loop of the stem-loop, optionally wherein positions 27-30 comprise a tetraloop, wherein positions 21 and 22 of the antisense strand comprise an overhang, and wherein the sense strand and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 786 and 874, respectively;


(b) SEQ ID NOs: 787 and 875, respectively;


(c) SEQ ID NOs: 1537 and 929, respectively; and,


(d) SEQ ID NOs: 813 and 901, respectively.


In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 786 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 874. In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 787 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 875. In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1537 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 929. In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 813 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 901.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1512; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1513; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1514; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1515; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1512; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1513; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1514; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1515; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1512; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1509, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1513; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1510, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1514; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1409, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1515; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1511, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1512; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1509, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1513; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1510, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1514; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1409, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, a NR1H3-targeting dsRNAi oligonucleotide for reducing NR1H3 expression comprises (i) an antisense strand of 19-30 nucleotides in length, wherein the antisense strand comprises a nucleotide sequence comprising a region of complementarity to a NR1H3 mRNA target sequence, wherein the region of complementarity is set forth in SEQ ID NO: 1515; and (ii) a sense strand of 19-50 nucleotides in length comprising a region of complementarity to the antisense strand and a stem-loop at the 3′terminus, wherein the region of complementarity to the antisense strand is set forth in SEQ ID NO: 1511, wherein the stem-loop is set forth as S1-L-S2, wherein S1 is complementary to S2 and wherein L forms a loop between S1 and S2 of 3 to 5 nucleotides in length, wherein the antisense and sense strands are separate strands which form an asymmetric duplex region having an overhang of 1-4 nucleotides at the 3′ terminus of the antisense strand.


In some embodiments, the disclosure provides an oligonucleotide (e.g., an RNAi oligonucleotide) for reducing NR1H3 expression, wherein the oligonucleotide comprises a sense strand and an antisense strand according to:


Sense Strand: 5′-mX-S-mX-mX-mX-mX-mX-mX-fX-fX-fX-fX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mX-mX-mX-mX-mX-mX-3′;


hybridized to:


Antisense Strand: 5′-[MePhosphonate-40-mX]-S-fX-S-fX-fX-fX-mX-fX-mX-mX-fX-mX-mX-mX-fX-mX-mX-mX-mX-mX-mX-S-mX-S-mX-3′;

wherein mX=2′-O-methyl modified nucleotide, fX=2′-fluoro modified nucleotide, -S-=phosphorothioate linkage, -=phosphodiester linkage, [MePhosphonate-40-mX]=5′-methoxyphosphonate-4-oxy modified nucleotide, and ademA-GalNAc=GalNAc attached to an adenine nucleotide.


In some embodiments, the disclosure provides an oligonucleotide (e.g., an RNAi oligonucleotide) for reducing NR1H3 expression, wherein the oligonucleotide comprises a sense strand and an antisense strand according to:


Sense Strand: 5′-mX-S-mX-mX-mX-mX-mX-mX-fX-fX-fX-fX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-mX-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mX-mX-mX-mX-mX-mX-3′;


hybridized to:


Antisense Strand: 5′-[MePhosphonate-40-mX]-S-fX-S-fX-S-fX-fX-mX-fX-mX-mX-fX-mX-mX-mX-fX-mX-mX-mX-mX-mX-mX-S-mX-S-mX-3′;

wherein mX=2′-O-methyl modified nucleotide, fX=2′-fluoro modified nucleotide, -S-=phosphorothioate linkage, -=phosphodiester linkage, [MePhosphonate-40-mX]=5′-methoxyphosphonate-4-oxy modified nucleotide, and ademA-GalNAc=GalNAc attached to an adenine nucleotide.


In some embodiments, the disclosure provides an oligonucleotide (e.g., an RNAi oligonucleotide) for reducing NR1H3 expression, wherein the oligonucleotide comprises a sense strand and an antisense strand comprising nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 945 and 1033, respectively;


(b) SEQ ID NOs: 946 and 1034, respectively;


(c) SEQ ID NOs: 947 and 1035, respectively;


(d) SEQ ID NOs: 948 and 1036, respectively;


(e) SEQ ID NOs: 949 and 1037, respectively;


(f) SEQ ID NOs: 950 and 1038, respectively;


(g) SEQ ID NOs: 951 and 1039, respectively;


(h) SEQ ID NOs: 952 and 1040, respectively;


(i) SEQ ID NOs: 953 and 1041, respectively;


(j) SEQ ID NOs: 954 and 1042, respectively;


(k) SEQ ID NOs: 955 and 1043, respectively;


(l) SEQ ID NOs: 956 and 1044 respectively;


(m) SEQ ID NOs: 957 and 1045, respectively;


(n) SEQ ID NOs: 958 and 1046, respectively;


(o) SEQ ID NOs: 959 and 1047, respectively;


(p) SEQ ID NOs: 960 and 1048, respectively;


(q) SEQ ID NOs: 961 and 1049, respectively;


(r) SEQ ID NOs: 962 and 1050, respectively;


(s) SEQ ID NOs: 963 and 1051, respectively;


(t) SEQ ID NOs: 964 and 1052, respectively;


(u) SEQ ID NOs: 965 and 1053, respectively;


(v) SEQ ID NOs: 966 and 1054, respectively;


(w) SEQ ID NOs: 967 and 1055, respectively;


(x) SEQ ID NOs: 968 and 1056, respectively;


(y) SEQ ID NOs: 969 and 1057, respectively;


(z) SEQ ID NOs: 970 and 1058, respectively;


(aa) SEQ ID NOs: 971 and 1059, respectively;


(bb) SEQ ID NOs: 972 and 1060, respectively;


(cc) SEQ ID NOs: 973 and 1061, respectively;


(dd) SEQ ID NOs: 974 and 1062, respectively;


(ee) SEQ ID NOs: 975 and 1063, respectively;


(ff) SEQ ID NOs: 976 and 1064, respectively;


(gg) SEQ ID NOs: 977 and 1065, respectively;


(hh) SEQ ID NOs: 978 and 1066, respectively;


(ii) SEQ ID NOs: 979 and 1067, respectively;


(jj) SEQ ID NOs: 980 and 1068, respectively;


(kk) SEQ ID NOs: 981 and 1069, respectively;


(ll) SEQ ID NOs: 982 and 1070, respectively;


(mm) SEQ ID NOs: 983 and 1071, respectively;


(nn) SEQ ID NOs: 984 and 1072, respectively;


(oo) SEQ ID NOs: 985 and 1073, respectively;


(pp) SEQ ID NOs: 986 and 1074, respectively;


(qq) SEQ ID NOs: 987 and 1075, respectively;


(rr) SEQ ID NOs: 988 and 1076, respectively;


(ss) SEQ ID NOs: 989 and 1077, respectively;


(tt) SEQ ID NOs: 990 and 1078, respectively;


(uu) SEQ ID NOs: 991 and 1079, respectively;


(vv) SEQ ID NOs: 992 and 1080, respectively;


(ww) SEQ ID NOs: 993 and 1081, respectively;


(xx) SEQ ID NOs: 994 and 1082, respectively;


(yy) SEQ ID NOs: 995 and 1083, respectively;


(zz) SEQ ID NOs: 996 and 1084, respectively;


(aaa) SEQ ID NOs: 997 and 1085, respectively;


(bbb) SEQ ID NOs: 998 and 1086, respectively;


(ccc) SEQ ID NOs: 999 and 1087, respectively;


(ddd) SEQ ID NOs: 1000 and 1088, respectively;


(eee) SEQ ID NOs: 1001 and 1089, respectively;


(fff) SEQ ID NOs: 1002 and 1090, respectively;


(ggg) SEQ ID NOs: 1003 and 1091, respectively;


(hhh) SEQ ID NOs: 1004 and 1092 respectively;


(iii) SEQ ID NOs: 1005 and 1093 respectively;


(jjj) SEQ ID NOs: 1006 and 1094, respectively;


(kkk) SEQ ID NOs: 1007 and 1095, respectively;


(lll) SEQ ID NOs: 1008 and 1096, respectively;


(mmm) SEQ ID NOs: 1009 and 1097, respectively;


(nnn) SEQ ID NOs: 1010 and 1098, respectively;


(ooo) SEQ ID NOs: 1011 and 1099, respectively;


(ppp) SEQ ID NOs: 1012 and 1100, respectively;


(qqq) SEQ ID NOs: 1013 and 1101, respectively;


(rrr) SEQ ID NOs: 1014 and 1102 respectively;


(sss) SEQ ID NOs: 1015 and 1103, respectively;


(ttt) SEQ ID NOs: 1016 and 1104, respectively;


(uuu) SEQ ID NOs: 1017 and 1105, respectively;


(vvv) SEQ ID NOs: 1018 and 1106, respectively;


(www) SEQ ID NOs: 1019 and 1107, respectively;


(xxx) SEQ ID NOs: 1020 and 1108, respectively;


(yyy) SEQ ID NOs: 1021 and 1109, respectively;


(zzz) SEQ ID NOs: 1022 and 1110, respectively;


(aaaa) SEQ ID NOs: 1023 and 1111, respectively;


(bbbb) SEQ ID NOs: 1024 and 1112, respectively;


(cccc) SEQ ID NOs: 1025 and 1113, respectively;


(dddd) SEQ ID NOs: 1026 and 1114, respectively;


(eeee) SEQ ID NOs: 1027 and 1115, respectively;


(ffff) SEQ ID NOs: 1028 and 1116, respectively;


(gggg) SEQ ID NOs: 1029 and 1117, respectively;


(hhhh) SEQ ID NOs: 1030 and 1118, respectively;


(iiii) SEQ ID NOs: 1031 and 1119, respectively; and,


(jjjj) SEQ ID NOs: 1032 and 1120, respectively.


In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 963 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1051. In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 964 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1052. In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1006 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1094. In some embodiments, a NR1H3-targeting oligonucleotide for reducing NR1H3 expression provided by the disclosure comprises a sense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1018 and an antisense strand comprising the nucleotide sequence as set forth in SEQ ID NO: 1106.


Formulations

Various formulations (e.g., pharmaceutical formulations) have been developed for oligonucleotide use. For example, oligonucleotides (e.g., RNAi oligonucleotides) can be delivered to a subject or a cellular environment using a formulation that minimizes degradation, facilitates delivery and/or uptake, or provides another beneficial property to the oligonucleotides in the formulation. In some embodiments, provided herein are compositions comprising oligonucleotides (e.g., RNAi oligonucleotides) reduce the expression of NR1H3. Such compositions can be suitably formulated such that when administered to a subject, either into the immediate environment of a target cell or systemically, a sufficient portion of the oligonucleotides enter the cell to reduce NR1H3 expression. Any variety of suitable oligonucleotide formulations can be used to deliver oligonucleotides for the reduction of NR1H3 as disclosed herein. In some embodiments, an oligonucleotide is formulated in buffer solutions such as phosphate buffered saline solutions, liposomes, micellar structures, and capsids. Any of the oligonucleotides described herein may be provided not only as nucleic acids, but also in the form of a pharmaceutically acceptable salt.


Formulations of oligonucleotides with cationic lipids can be used to facilitate transfection of the oligonucleotides into cells. For example, cationic lipids, such as lipofectin, cationic glycerol derivatives, and polycationic molecules (e.g., polylysine), can be used. Suitable lipids include Oligofectamine, Lipofectamine (Life Technologies), NC388 (Ribozyme Pharmaceuticals, Inc., Boulder, Colo.), or FuGene 6 (Roche) all of which can be used according to the manufacturer's instructions.


Accordingly, in some embodiments, a formulation comprises a lipid nanoparticle. In some embodiments, an excipient comprises a liposome, a lipid, a lipid complex, a microsphere, a microparticle, a nanosphere or a nanoparticle, or may be otherwise formulated for administration to the cells, tissues, organs, or body of a subject in need thereof (see, e.g., Remington: THE SCIENCE AND PRACTICE OF PHARMACY, 22nd edition, Pharmaceutical Press, 2013).


In some embodiments, the formulations herein comprise an excipient. In some embodiments, an excipient confers to a composition improved stability, improved absorption, improved solubility and/or therapeutic enhancement of the active ingredient. In some embodiments, an excipient is a buffering agent (e.g., sodium citrate, sodium phosphate, a tris base, or sodium hydroxide) or a vehicle (e.g., a buffered solution, petrolatum, dimethyl sulfoxide, or mineral oil). In some embodiments, an oligonucleotide is lyophilized for extending its shelf-life and then made into a solution before use (e.g., administration to a subject). Accordingly, an excipient in a composition comprising any one of the oligonucleotides described herein may be a lyoprotectant (e.g., mannitol, lactose, polyethylene glycol or polyvinylpyrrolidone) or a collapse temperature modifier (e.g., dextran, Ficoll™ or gelatin).


In some embodiments, a pharmaceutical composition is formulated to be compatible with its intended route of administration. The route of administration may be any route which effectively transports a compound of this invention to the desired or appropriate place in the body. Examples of routes of administration include parenteral (e.g., intravenous, intramuscular, intraperitoneal, intradermal, subcutaneous), oral (e.g., inhalation), transdermal (e.g., topical), transmucosal and rectal administration.


Pharmaceutical compositions suitable for injectable use include sterile aqueous solutions (where water soluble) or dispersions and sterile powders for the extemporaneous preparation of sterile injectable solutions or dispersions. For intravenous administration, suitable carriers include physiological saline, bacteriostatic water, Cremophor EL™ (BASF, Parsippany, N.J.) or phosphate buffered saline (PBS). The carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (e.g., glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. In many cases, it will be preferable to include isotonic agents, for example, sugars, polyalcohols such as mannitol, sorbitol, sodium chloride in the composition. Sterile injectable solutions can be prepared by incorporating the oligonucleotides in a required amount in a selected solvent with one or a combination of ingredients enumerated above, as required, followed by filtered sterilization.


In some embodiments, a composition may contain at least about 0.1% of the therapeutic agent (e.g., a RNAi oligonucleotide for reducing NR1H3 expression) or more, although the percentage of the active ingredient(s) may be between about 1% to about 80% or more of the weight or volume of the total composition. Factors such as solubility, bioavailability, biological half-life, route of administration, product shelf life, as well as other pharmacological considerations will be contemplated by one skilled in the art of preparing such pharmaceutical formulations, and as such, a variety of dosages and treatment regimens may be desirable.


Methods of Use
Reducing NR1H3 Expression

In some embodiments, the disclosure provides methods for contacting or delivering to a cell or population of cells an effective amount of oligonucleotides provided herein (e.g., RNAi oligonucleotides) to reduce NR1H3 expression. In some embodiments, a reduction of NR1H3 expression is determined by measuring a reduction in the amount or level of NR1H3 mRNA, NR1H3 protein, or NR1H3 activity in a cell. The methods include those described herein and known to one of ordinary skill in the art.


Methods provided herein are useful in any appropriate cell type. In some embodiments, a cell is any cell that expresses NR1H3 mRNA (e.g., hepatocytes). In some embodiments, the cell is a primary cell obtained from a subject. In some embodiments, the primary cell has undergone a limited number of passages such that the cell substantially maintains its natural phenotypic properties. In some embodiments, a cell to which the oligonucleotide is delivered is ex vivo or in vitro (i.e., can be delivered to a cell in culture or to an organism in which the cell resides).


In some embodiments, the oligonucleotides herein (e.g., RNAi oligonucleotides) are delivered to a cell or population of cells using a nucleic acid delivery method known in the art including, but not limited to, injection of a solution containing the oligonucleotides, bombardment by particles covered by the oligonucleotides, exposing the cell or population of cells to a solution containing the oligonucleotides, or electroporation of cell membranes in the presence of the oligonucleotides. Other methods known in the art for delivering oligonucleotides to cells may be used, such as lipid-mediated carrier transport, chemical-mediated transport, and cationic liposome transfection such as calcium phosphate, and others.


In some embodiments, reduction of NR1H3 expression is determined by an assay or technique that evaluates one or more molecules, properties, or characteristics of a cell or population of cells associated with NR1H3 expression, or by an assay or technique that evaluates molecules that are directly indicative of NR1H3 expression in a cell or population of cells (e.g., NR1H3 mRNA or NR1H3 protein). In some embodiments, the extent to which an oligonucleotide provided herein reduces NR1H3 expression is evaluated by comparing NR1H3 expression in a cell or population of cells contacted with the oligonucleotide to an appropriate control (e.g., an appropriate cell or population of cells not contacted with the oligonucleotide or contacted with a control oligonucleotide). In some embodiments, a control amount or level of NR1H3 expression in a control cell or population of cells is predetermined, such that the control amount or level need not be measured in every instance the assay or technique is performed. The predetermined level or value can take a variety of forms. In some embodiments, a predetermined level or value can be single cut-off value, such as a median or mean.


In some embodiments, contacting or delivering an oligonucleotide described herein (e.g., an RNAi oligonucleotide) to a cell or a population of cells results in a reduction in NR1H3 expression in a cell or population of cells not contacted with the oligonucleotide or contacted with a control oligonucleotide. In some embodiments, the reduction in NR1H3 expression is about 1% or lower, about 5% or lower, about 10% or lower, about 15% or lower, about 20% or lower, about 25% or lower, about 30% or lower, about 35% or lower, about 40% or lower, about 45% or lower, about 50% or lower, about 55% or lower, about 60% or lower, about 70% or lower, about 80% or lower, or about 90% or lower relative to a control amount or level of NR1H3 expression. In some embodiments, the control amount or level of NR1H3 expression is an amount or level of NR1H3 mRNA and/or NR1H3 protein in a cell or population of cells that has not been contacted with an oligonucleotide herein. In some embodiments, the effect of delivery of an oligonucleotide herein to a cell or population of cells according to a method herein is assessed after any finite period or amount of time (e.g., minutes, hours, days, weeks, months). For example, in some embodiments, NR1H3 expression is determined in a cell or population of cells at least about 4 hours, about 8 hours, about 12 hours, about 18 hours, about 24 hours; or at least about 1 day, about 2 days, about 3 days, about 4 days, about 5 days, about 6 days, about 7 days, about 8 days, about 9 days, about 10 days, about 11 days, about 12 days, about 13 days, about 14 days, about 21 days, about 28 days, about 35 days, about 42 days, about 49 days, about 56 days, about 63 days, about 70 days, about 77 days, or about 84 days or more after contacting or delivering the oligonucleotide to the cell or population of cells. In some embodiments, NR1H3 expression is determined in a cell or population of cells at least about 1 month, about 2 months, about 3 months, about 4 months, about 5 months, or about 6 months or more after contacting or delivering the oligonucleotide to the cell or population of cells.


In some embodiments, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide) is delivered in the form of a transgene that is engineered to express in a cell the oligonucleotide or strands comprising the oligonucleotide (e.g., its sense and antisense strands). In some embodiments, an oligonucleotide herein is delivered using a transgene engineered to express any oligonucleotide disclosed herein. Transgenes may be delivered using viral vectors (e.g., adenovirus, retrovirus, vaccinia virus, poxvirus, adeno-associated virus, or herpes simplex virus) or non-viral vectors (e.g., plasmids or synthetic mRNAs). In some embodiments, transgenes can be injected directly to a subject.


Treatment Methods

The disclosure provides oligonucleotides (e.g., RNAi oligonucleotides) for use as a medicament, in particular for use in a method for the treatment of diseases, disorders, and conditions associated with expression of NR1H3. The disclosure also provides oligonucleotides for use, or adaptable for use, to treat a subject (e.g., a human having a disease, disorder or condition associated with NR1H3 expression) that would benefit from reducing NR1H3 expression. In some respects, the disclosure provides oligonucleotides for use, or adapted for use, to treat a subject having a disease, disorder or condition associated with expression of NR1H3. The disclosure also provides oligonucleotides for use, or adaptable for use, in the manufacture of a medicament or pharmaceutical composition for treating a disease, disorder or condition associated with NR1H3 expression. In some embodiments, the oligonucleotides for use, or adaptable for use, target NR1H3 mRNA and reduce NR1H3 expression (e.g., via the RNAi pathway). In some embodiments, the oligonucleotides for use, or adaptable for use, target NR1H3 mRNA and reduce the amount or level of NR1H3 mRNA, NR1H3 protein and/or NR1H3 activity.


In addition, in some embodiments of the methods herein, a subject having a disease, disorder, or condition associated with NR1H3 expression or is predisposed to the same is selected for treatment with an oligonucleotide provided herein (e.g., an RNAi oligonucleotide). In some embodiments, the method comprises selecting an individual having a marker (e.g., a biomarker) for a disease, disorder, or condition associated with NR1H3 expression or predisposed to the same, such as, but not limited to, NR1H3 mRNA, NR1H3 protein, or a combination thereof. Likewise, and as detailed below, some embodiments of the methods provided by the disclosure include steps such as measuring or obtaining a baseline value for a marker of NR1H3 expression (e.g., NR1H3 mRNA), and then comparing such obtained value to one or more other baseline values or values obtained after the subject is administered the oligonucleotide to assess the effectiveness of treatment.


The disclosure also provides methods of treating a subject having, suspected of having, or at risk of developing a disease, disorder or condition associated with a NR1H3 expression with an oligonucleotide provided herein. In some respects, the current disclosure provides methods of treating or attenuating the onset or progression of a disease, disorder or condition associated with NR1H3 expression using the oligonucleotides herein. In other aspects, the disclosure provides methods to achieve one or more therapeutic benefits in a subject having a disease, disorder, or condition associated with NR1H3 expression using the oligonucleotides provided herein. In some embodiments of the methods herein, the subject is treated by administering a therapeutically effective amount of any one or more of the oligonucleotides provided herein. In some embodiments, treatment comprises reducing NR1H3 expression. In some embodiments, the subject is treated therapeutically. In some embodiments, the subject is treated prophylactically.


In some embodiments of the methods herein, one or more oligonucleotides herein (e.g., RNAi oligonucleotides), or a pharmaceutical composition comprising one or more oligonucleotides, is administered to a subject having a disease, disorder or condition associated with NR1H3 expression such that NR1H3 expression is reduced in the subject, thereby treating the subject. In some embodiments, an amount or level of NR1H3 mRNA is reduced in the subject. In some embodiments, an amount or level of NR1H3 protein is reduced in the subject. In some embodiments, an amount or level of NR1H3 activity is reduced in the subject.


In some embodiments of the methods herein, an oligonucleotide provided herein (e.g., an RNAi oligonucleotide), or a pharmaceutical composition comprising the oligonucleotide, is administered to a subject having a disease, disorder or condition associated with NR1H3 such that NR1H3 expression is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to NR1H3 expression prior to administration of one or more oligonucleotides or pharmaceutical composition. In some embodiments, NR1H3 expression is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to NR1H3 expression in a subject (e.g., a reference or control subject) not receiving the oligonucleotide or oligonucleotides or pharmaceutical composition or receiving a control oligonucleotide or oligonucleotides, pharmaceutical composition or treatment.


In some embodiments of the methods herein, an oligonucleotide or oligonucleotides herein (e.g., RNAi oligonucleotides), or a pharmaceutical composition comprising the oligonucleotide or oligonucleotides, is administered to a subject having a disease, disorder or condition associated with NR1H3 expression such that an amount or level of NR1H3 mRNA is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to the amount or level of NR1H3 mRNA prior to administration of the oligonucleotide or pharmaceutical composition. In some embodiments, an amount or level of NR1H3 mRNA is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to an amount or level of NR1H3 mRNA in a subject (e.g., a reference or control subject) not receiving the oligonucleotide or oligonucleotides or pharmaceutical composition or receiving a control oligonucleotide or oligonucleotides, pharmaceutical composition or treatment.


In some embodiments of the methods herein, an oligonucleotide or oligonucleotides herein, or a pharmaceutical composition comprising the oligonucleotide or oligonucleotides, is administered to a subject having a disease, disorder or condition associated with NR1H3 expression such that an amount or level of NR1H3 protein is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99% or greater than 99% when compared to the amount or level of NR1H3 protein prior to administration of the oligonucleotide or pharmaceutical composition. In some embodiments, an amount or level of NR1H3 protein is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to an amount or level of NR1H3 protein in a subject (e.g., a reference or control subject) not receiving the oligonucleotide or oligonucleotides or pharmaceutical composition or receiving a control oligonucleotide, oligonucleotides or pharmaceutical composition or treatment.


In some embodiments of the methods herein, an oligonucleotide or oligonucleotides (e.g., RNAi oligonucleotides) herein, or a pharmaceutical composition comprising the oligonucleotide or oligonucleotides, is administered to a subject having a disease, disorder or condition associated with NR1H3 such that an amount or level of NR1H3 gene activity/expression is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to the amount or level of NR1H3 activity prior to administration of the oligonucleotide or pharmaceutical composition. In some embodiments, an amount or level of NR1H3 activity is reduced in the subject by at least about 30%, about 35%, about 40%, about 45%, about 50%, about 55%, about 60%, about 65%, about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 99%, or greater than 99% when compared to an amount or level of NR1H3 activity in a subject (e.g., a reference or control subject) not receiving the oligonucleotide or pharmaceutical composition or receiving a control oligonucleotide, pharmaceutical composition or treatment.


Suitable methods for determining NR1H3 expression, the amount or level of NR1H3 mRNA, NR1H3 protein, NR1H3 activity, or a biomarker related to or affected by modulation of NR1H3 expression (e.g., a plasma biomarker), in the subject, or in a sample from the subject, are known in the art. Further, the Examples set forth herein illustrate methods for determining NR1H3 expression.


In some embodiments, NR1H3 expression, the amount or level of NR1H3 mRNA, NR1H3 protein, NR1H3 activity, or a biomarker related to or affected by modulation of NR1H3 expression, or any combination thereof, is reduced in a cell (e.g., a hepatocyte), a population or a group of cells (e.g., an organoid), an organ (e.g., liver), blood or a fraction thereof (e.g., plasma), a tissue (e.g., liver tissue), a sample (e.g., a liver biopsy sample), or any other appropriate biological material obtained or isolated from the subject. In some embodiments, NR1H3 expression, the amount or level of NR1H3 mRNA, NR1H3 protein, NR1H3 activity, or a biomarker related to or affected by modulation of NR1H3 expression, or any combination thereof, is reduced in more than one type of cell (e.g., a hepatocyte and one or more other type(s) of cell), more than one groups of cells, more than one organ (e.g., liver and one or more other organ(s)), more than one fraction of blood (e.g., plasma and one or more other blood fraction(s)), more than one type of tissue (e.g., liver tissue and one or more other type(s) of tissue), or more than one type of sample (e.g., a liver biopsy sample and one or more other type(s) of biopsy sample).


Because of their high specificity, the oligonucleotides provided herein (e.g., dsRNAi oligonucleotides) specifically target mRNA of target genes (e.g., NR1H3 mRNA) of cells and tissue(s), or organs(s) (e.g., liver). In preventing disease, the target gene may be one which is required for initiation or maintenance of the disease or which has been identified as being associated with a higher risk of contracting the disease. In treating disease, the oligonucleotide can be brought into contact with the cells, tissue(s), or organ(s) (e.g., liver) exhibiting or responsible for mediating the disease. For example, an oligonucleotide (e.g., an RNAi oligonucleotide) substantially identical to all or part of a wild-type (i.e., native) or mutated gene associated with a disorder or condition associated with NR1H3 expression may be brought into contact with or introduced into a cell or tissue type of interest such as a hepatocyte or other liver cell.


In some embodiments, the target gene may be a target gene from any mammal, such as a human target. Any target gene may be silenced according to the method described herein.


Methods described herein typically involve administering to a subject an effective amount of an oligonucleotide herein (e.g., a RNAi oligonucleotide), that is, an amount that produces or generates a desirable therapeutic result. A therapeutically acceptable amount may be an amount that therapeutically treats a disease or disorder. The appropriate dosage for any one subject will depend on certain factors, including the subject's size, body surface area, age, the composition to be administered, the active ingredient(s) in the composition, time and route of administration, general health, and other drugs being administered concurrently.


In some embodiments, a subject is administered any one of the compositions herein (e.g., a composition comprising an RNAi oligonucleotide described herein) either enterally (e.g., orally, by gastric feeding tube, by duodenal feeding tube, via gastrostomy or rectally), parenterally (e.g., subcutaneous injection, intravenous injection or infusion, intra-arterial injection or infusion, intraosseous infusion, intramuscular injection, intracerebral injection, intracerebroventricular injection, intrathecal), topically (e.g., epicutaneous, inhalational, via eye drops, or through a mucous membrane), or by direct injection into a target organ (e.g., the liver of a subject). Typically, oligonucleotides herein are administered intravenously or subcutaneously.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide), or a pharmaceutical composition comprising the oligonucleotide, is administered alone or in combination. In some embodiments, the oligonucleotides herein are administered in combination concurrently, sequentially (in any order), or intermittently. For example, two oligonucleotides may be co-administered concurrently. Alternatively, one oligonucleotide may be administered and followed any amount of time later (e.g., one hour, one day, one week or one month) by the administration of a second oligonucleotide.


In some embodiments, an oligonucleotide herein (e.g., an RNAi oligonucleotide), or a pharmaceutical composition comprising the oligonucleotide, is administered in combination with one or more additional pharmacologically active substances. In some embodiments the additional pharmacologically active substances are selected from e.g., anti-diabetic agents, anti-obesity agents, appetite regulating agents, antihypertensive agents, agents.


In some embodiments, the subject to be treated is a human or non-human primate or other mammalian subject. Other exemplary subjects include domesticated animals such as dogs and cats; livestock such as horses, cattle, pigs, sheep, goats, and chickens; and animals such as mice, rats, guinea pigs, and hamsters.


Kits

In some embodiments, the disclosure provides a kit comprising an oligonucleotide herein (e.g., an RNAi oligonucleotide), and instructions for use. In some embodiments, the kit comprises an oligonucleotide herein, and a package insert containing instructions for use of the kit and/or any component thereof. In some embodiments, the kit comprises, in a suitable container, an oligonucleotide herein, one or more controls, and various buffers, reagents, enzymes and other standard ingredients well known in the art. In some embodiments, the container comprises at least one vial, well, test tube, flask, bottle, syringe, or other container means, into which the oligonucleotide is placed, and in some instances, suitably aliquoted. In some embodiments where an additional component is provided, the kit contains additional containers into which this component is placed. The kits can also include a means for containing the oligonucleotide and any other reagent in close confinement for commercial sale. Such containers may include injection or blow-molded plastic containers into which the desired vials are retained. Containers and/or kits can include labeling with instructions for use and/or warnings.


In some embodiments, a kit comprises an oligonucleotide herein (e.g., an RNAi oligonucleotide), and a pharmaceutically acceptable carrier, or a pharmaceutical composition comprising the oligonucleotide and instructions for treating or delaying progression of a disease, disorder or condition associated with NR1H3 expression in a subject in need thereof.


Definitions

As used herein, the term “antisense oligonucleotide” encompasses a nucleic acid-based molecule which has a sequence complementary to all or part of the target mRNA, in particular seed sequence thereby capable of forming a duplex with a mRNA. Thus, the term “antisense oligonucleotide”, as used herein, may be referred to as “complementary nucleic acid-based inhibitor”.


As used herein, “approximately” or “about,” as applied to one or more values of interest, refers to a value that is similar to a stated reference value. In certain embodiments, “about” refers to a range of values that fall within 25%, 20%, 19%, 18%, 17%, 16%, 15%, 14%, 13%, 12%, 11%, 10%, 9%, 8%, 7%, 6%, 5%, 4%, 3%, 2%, 1%, or less in either direction (greater than or less than) of the stated reference value unless otherwise stated or otherwise evident from the context (except where such number would exceed 100% of a possible value).


As used herein, “administer,” “administering,” “administration” and the like refers to providing a substance (e.g., an oligonucleotide) to a subject in a manner that is pharmacologically useful (e.g., to treat a disease, disorder, or condition in the subject).


As used herein, “attenuate,” “attenuating,” “attenuation” and the like refers to reducing or effectively halting. As a non-limiting example, one or more of the treatments herein may reduce or effectively halt the onset or progression of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), or systemic lupus erythematosus in a subject. This attenuation may be exemplified by, for example, a decrease in one or more aspects (e.g., symptoms, tissue characteristics, and cellular, inflammatory, or immunological activity, etc.) of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), or systemic lupus erythematosus, no detectable progression (worsening) of one or more aspects fatty liver disease, or systemic lupus erythematosus, or no detectable aspects of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), or systemic lupus erythematosus in a subject when they might otherwise be expected.


As used herein, “complementary” refers to a structural relationship between two nucleotides (e.g., on two opposing nucleic acids or on opposing regions of a single nucleic acid strand) that permits the two nucleotides to form base pairs with one another. For example, a purine nucleotide of one nucleic acid that is complementary to a pyrimidine nucleotide of an opposing nucleic acid may base pair together by forming hydrogen bonds with one another. In some embodiments, complementary nucleotides can base pair in the Watson-Crick manner or in any other manner that allows for the formation of stable duplexes. In some embodiments, two nucleic acids may have regions of multiple nucleotides that are complementary with each other to form regions of complementarity, as described herein.


As used herein, “deoxyribonucleotide” refers to a nucleotide having a hydrogen in place of a hydroxyl at the 2′ position of its pentose sugar when compared with a ribonucleotide. A modified deoxyribonucleotide is a deoxyribonucleotide having one or more modifications or substitutions of atoms other than at the 2′ position, including modifications or substitutions in or of the sugar, phosphate group or base.


As used herein, “double-stranded oligonucleotide” or “ds oligonucleotide” refers to an oligonucleotide that is substantially in a duplex form. In some embodiments, the complementary base-pairing of duplex region(s) of a double-stranded oligonucleotide is formed between antiparallel sequences of nucleotides of covalently separate nucleic acid strands. In some embodiments, complementary base-pairing of duplex region(s) of a double-stranded oligonucleotide is formed between antiparallel sequences of nucleotides of nucleic acid strands that are covalently linked. In some embodiments, complementary base-pairing of duplex region(s) of a double-stranded oligonucleotide is formed from single nucleic acid strand that is folded (e.g., via a hairpin) to provide complementary antiparallel sequences of nucleotides that base pair together. In some embodiments, a double-stranded oligonucleotide comprises two covalently separate nucleic acid strands that are fully duplexed with one another. However, in some embodiments, a double-stranded oligonucleotide comprises two covalently separate nucleic acid strands that are partially duplexed (e.g., having overhangs at one or both ends). In some embodiments, a double-stranded oligonucleotide comprises antiparallel sequence of nucleotides that are partially complementary, and thus, may have one or more mismatches, which may include internal mismatches or end mismatches.


As used herein, “duplex,” in reference to nucleic acids (e.g., oligonucleotides), refers to a structure formed through complementary base pairing of two antiparallel sequences of nucleotides.


As used herein, “excipient” refers to a non-therapeutic agent that may be included in a composition, for example, to provide or contribute to a desired consistency or stabilizing effect.


As used herein, “hepatocyte” or “hepatocytes” refers to cells of the parenchymal tissues of the liver. These cells make up about 70-85% of the liver's mass and manufacture serum albumin, FBN and the prothrombin group of clotting factors (except for Factors 3 and 4). Markers for hepatocyte lineage cells include, but are not limited to, transthyretin (Ttr), glutamine synthetase (Glul), hepatocyte nuclear factor 1a (Hnf1a) and hepatocyte nuclear factor 4a (Hnf4a). Markers for mature hepatocytes may include, but are not limited to, cytochrome P450 (Cyp3a11), fumarylacetoacetate hydrolase (Fah), glucose 6-phosphate (G6p), albumin (Alb) and OC2-2F8. See, e.g., Huch et al. NATURE (2013); 494: 247-50.


As used herein, a “hepatotoxic agent” refers to a chemical compound, virus or other substance that is itself toxic to the liver or can be processed to form a metabolite that is toxic to the liver. Hepatotoxic agents may include, but are not limited to, carbon tetrachloride (CCl4), acetaminophen (paracetamol), vinyl chloride, arsenic, chloroform, nonsteroidal anti-inflammatory drugs (such as aspirin and phenylbutazone).


As used herein, the term “NR1H3” refers to the gene which encodes to the protein Liver X receptor alpha, or LXR-alpha. LXR-alpha is a nuclear receptor protein that is encoded by NR1H3 (nuclear receptor subfamily 1, group H, member 3). The term “NR1H3” is intended to refer to all isoforms unless stated otherwise.


As used herein, “labile linker” refers to a linker that can be cleaved (e.g., by acidic pH). A “fairly stable linker” refers to a linker that cannot be readily cleaved.


As used herein, “liver inflammation” or “hepatitis” refers to a physical condition in which the liver becomes swollen, dysfunctional and/or painful, especially as a result of injury or infection, as may be caused by exposure to a hepatotoxic agent. Symptoms may include jaundice (yellowing of the skin or eyes), fatigue, weakness, nausea, vomiting, appetite reduction and weight loss. Liver inflammation, if left untreated, may progress to fibrosis, cirrhosis, liver failure or liver cancer.


As used herein, “liver fibrosis” “Liver Fibrosis” or “fibrosis of the liver” refers to an excessive accumulation in the liver of extracellular matrix proteins, which could include collagens (I, III, and IV), FBN, undulin, elastin, laminin, hyaluronan and proteoglycans resulting from inflammation and liver cell death. Liver fibrosis, if left untreated, may progress to cirrhosis, liver failure or liver cancer.


As used herein, “loop” refers to an unpaired region of a nucleic acid (e.g., oligonucleotide) that is flanked by two antiparallel regions of the nucleic acid that are sufficiently complementary to one another, such that under appropriate hybridization conditions (e.g., in a phosphate buffer, in a cell), the two antiparallel regions, which flank the unpaired region, hybridize to form a duplex (referred to as a “stem”).


As used herein, “Metabolic syndrome’ or “metabolic liver disease” refers to a disorder characterized by a cluster of associated medical conditions and associated pathologies including, but not limited to the following medical conditions: abdominal obesity, elevated blood pressure, elevated fasting plasma glucose, high serum triglycerides, liver fibrosis, and low levels of high-density lipoprotein (HDL) levels. As used herein, the term metabolic syndrome or metabolic liver disease may encompass a wide array of direct and indirect manifestations, diseases and pathologies associated with metabolic syndrome and metabolic liver disease, with an expanded list of conditions used throughout the document.


As used herein, “modified internucleotide linkage” refers to an internucleotide linkage having one or more chemical modifications when compared with a reference internucleotide linkage comprising a phosphodiester bond. In some embodiments, a modified nucleotide is a non-naturally occurring linkage. Typically, a modified internucleotide linkage confers one or more desirable properties to a nucleic acid in which the modified internucleotide linkage is present. For example, a modified internucleotide linkage may improve thermal stability, resistance to degradation, nuclease resistance, solubility, bioavailability, bioactivity, reduced immunogenicity, etc.


As used herein, “modified nucleotide” refers to a nucleotide having one or more chemical modifications when compared with a corresponding reference nucleotide selected from: adenine ribonucleotide, guanine ribonucleotide, cytosine ribonucleotide, uracil ribonucleotide, adenine deoxyribonucleotide, guanine deoxyribonucleotide, cytosine deoxyribonucleotide and thymidine deoxyribonucleotide. In some embodiments, a modified nucleotide is a non-naturally occurring nucleotide. In some embodiments, a modified nucleotide has one or more chemical modification in its sugar, nucleobase and/or phosphate group. In some embodiments, a modified nucleotide has one or more chemical moieties conjugated to a corresponding reference nucleotide. Typically, a modified nucleotide confers one or more desirable properties to a nucleic acid in which the modified nucleotide is present. For example, a modified nucleotide may improve thermal stability, resistance to degradation, nuclease resistance, solubility, bioavailability, bioactivity, reduced immunogenicity, etc.


As used herein, “nicked tetraloop structure” refers to a structure of a RNAi oligonucleotide that is characterized by separate sense (passenger) and antisense (guide) strands, in which the sense strand has a region of complementarity with the antisense strand, and in which at least one of the strands, generally the sense strand, has a tetraloop configured to stabilize an adjacent stem region formed within the at least one strand.


As used herein, “oligonucleotide” refers to a short nucleic acid (e.g., less than about 100 nucleotides in length). An oligonucleotide may be single-stranded (ss) or double-stranded (ds). An oligonucleotide may or may not have duplex regions. As a set of non-limiting examples, an oligonucleotide may be, but is not limited to, a small interfering RNA (siRNA), microRNA (miRNA), short hairpin RNA (shRNA), dicer substrate interfering RNA (DsiRNA), antisense oligonucleotide, short siRNA or ss siRNA. In some embodiments, a double-stranded (dsRNA) is an RNAi oligonucleotide.


As used herein, “overhang” refers to terminal non-base pairing nucleotide(s) resulting from one strand or region extending beyond the terminus of a complementary strand with which the one strand or region forms a duplex. In some embodiments, an overhang comprises one or more unpaired nucleotides extending from a duplex region at the 5′ terminus or 3′ terminus of an oligonucleotide. In certain embodiments, the overhang is a 3′- or 5′-overhang on the antisense strand or sense strand of an oligonucleotide.


As used herein, “phosphate analog” refers to a chemical moiety that mimics the electrostatic and/or steric properties of a phosphate group. In some embodiments, a phosphate analog is positioned at the 5′ terminal nucleotide of an oligonucleotide in place of a 5′-phosphate, which is often susceptible to enzymatic removal. In some embodiments, a 5′ phosphate analog contains a phosphatase-resistant linkage. Examples of phosphate analogs include, but are not limited to, 5′ phosphonates, such as 5′ methylene phosphonate (5′-MP) and 5′-(E)-vinylphosphonate (5′-VP). In some embodiments, an oligonucleotide has a phosphate analog at a 4′-carbon position of the sugar (referred to as a “4′-phosphate analog”) at a 5′-terminal nucleotide. An example of a 4′-phosphate analog is oxymethylphosphonate, in which the oxygen atom of the oxymethyl group is bound to the sugar moiety (e.g., at its 4′-carbon) or analog thereof. See, e.g., US Provisional Patent Application Nos. 62/383,207 (filed on 2 Sep. 2016) and 62/393,401 (filed on 12 Sep. 2016). Other modifications have been developed for the 5′ end of oligonucleotides (see, e.g., Intl. Patent Application No. WO 2011/133871; U.S. Pat. No. 8,927,513; and Prakash et al. NUCLEIC ACIDS RES. (2015); 43: 2993-3011).


As used herein, “reduced expression” of a gene (e.g., NR1H3) refers to a decrease in the amount or level of RNA transcript (e.g., NR1H3 mRNA) or protein encoded by the gene and/or a decrease in the amount or level of activity of the gene in a cell, a population of cells, a sample, or a subject, when compared to an appropriate reference (e.g., a reference cell, population of cells, sample or subject). For example, the act of contacting a cell with an oligonucleotide herein (e.g., an oligonucleotide comprising an antisense strand having a nucleotide sequence that is complementary to a nucleotide sequence comprising NR1H3 mRNA) may result in a decrease in the amount or level of NR1H3 mRNA, protein and/or activity (e.g., via degradation of NR1H3 mRNA by the RNAi pathway) when compared to a cell that is not treated with the oligonucleotide. Similarly, and as used herein, “reducing expression” refers to an act that results in reduced expression of a gene (e.g., NR1H3).


As used herein, “reduction of NR1H3 expression” refers to a decrease in the amount or level of NR1H3 mRNA, NR1H3 protein and/or NR1H3 activity in a cell, a population of cells, a sample or a subject when compared to an appropriate reference (e.g., a reference cell, population of cells, sample, or subject).


As used herein, “region of complementarity” refers to a sequence of nucleotides of a nucleic acid (e.g., an oligonucleotide) that is sufficiently complementary to an antiparallel sequence of nucleotides to permit hybridization between the two sequences of nucleotides under appropriate hybridization conditions (e.g., in a phosphate buffer, in a cell, etc.). In some embodiments, an oligonucleotide herein comprises a targeting sequence having a region of complementary to a mRNA target sequence.


As used herein, “ribonucleotide” refers to a nucleotide having a ribose as its pentose sugar, which contains a hydroxyl group at its 2′ position. A modified ribonucleotide is a ribonucleotide having one or more modifications or substitutions of atoms other than at the 2′ position, including modifications or substitutions in or of the ribose, phosphate group or base.


As used herein, “RNAi oligonucleotide” refers to either (a) a double-stranded oligonucleotide having a sense strand (passenger) and antisense strand (guide), in which the antisense strand or part of the antisense strand is used by the Argonaute 2 (Ago2) endonuclease in the cleavage of a target mRNA (e.g., NR1H3 mRNA) or (b) a single-stranded oligonucleotide having a single antisense strand, where that antisense strand (or part of that antisense strand) is used by the Ago2 endonuclease in the cleavage of a target mRNA (e.g., NR1H3 mRNA).


As used herein, “strand” refers to a single, contiguous sequence of nucleotides linked together through internucleotide linkages (e.g., phosphodiester linkages or phosphorothioate linkages). In some embodiments, a strand has two free ends (e.g., a 5′ end and a 3′ end).


As used herein, “subject” means any mammal, including mice, rabbits, and humans. In one embodiment, the subject is a human or NHP. Moreover, “individual” or “patient” may be used interchangeably with “subject.”


As used herein, “synthetic” refers to a nucleic acid or other molecule that is artificially synthesized (e.g., using a machine (e.g., a solid-state nucleic acid synthesizer)) or that is otherwise not derived from a natural source (e.g., a cell or organism) that normally produces the molecule.


As used herein, “targeting ligand” refers to a molecule (e.g., a carbohydrate, amino sugar, cholesterol, polypeptide, or lipid) that selectively binds to a cognate molecule (e.g., a receptor) of a tissue or cell of interest and that is conjugatable to another substance for purposes of targeting the other substance to the tissue or cell of interest. For example, in some embodiments, a targeting ligand may be conjugated to an oligonucleotide for purposes of targeting the oligonucleotide to a specific tissue or cell of interest. In some embodiments, a targeting ligand selectively binds to a cell surface receptor. Accordingly, in some embodiments, a targeting ligand when conjugated to an oligonucleotide facilitates delivery of the oligonucleotide into a particular cell through selective binding to a receptor expressed on the surface of the cell and endosomal internalization by the cell of the complex comprising the oligonucleotide, targeting ligand and receptor. In some embodiments, a targeting ligand is conjugated to an oligonucleotide via a linker that is cleaved following or during cellular internalization such that the oligonucleotide is released from the targeting ligand in the cell. In some embodiments, the targeting ligand comprises at least one GalNAc moiety and targets the liver and human liver cells (e.g., human hepatocytes).


As used herein, “tetraloop” refers to a loop that increases stability of an adjacent duplex formed by hybridization of flanking sequences of nucleotides. The increase in stability is detectable as an increase in melting temperature (Tm) of an adjacent stem duplex that is higher than the Tm of the adjacent stem duplex expected, on average, from a set of loops of comparable length consisting of randomly selected sequences of nucleotides. For example, a tetraloop can confer a Tm of at least about 50° C., at least about 55° C., at least about 56° C., at least about 58° C., at least about 60° C., at least about 65° C., or at least about 75° C. in 10 mM Na2HPO4 to a hairpin comprising a duplex of at least 2 base pairs (bp) in length. In some embodiments, a tetraloop can confer a Tm of at least about 50° C., at least about 55° C., at least about 56° C., at least about 58° C., at least about 60° C., at least about 65° C., or at least about 75° C. in 10 mM NaH2PO4 to a hairpin comprising a duplex of at least 2 base pairs (bp) in length. In some embodiments, a tetraloop may stabilize a bp in an adjacent stem duplex by stacking interactions. In addition, interactions among the nucleotides in a tetraloop include, but are not limited to, non-Watson-Crick base pairing, stacking interactions, hydrogen bonding and contact interactions (Cheong et al. NATURE (1990); 346: 680-82; and Heus & Pardi SCIENCE (1991); 253: 191-94). In some embodiments, a tetraloop comprises or consists of 3 to 6 nucleotides and is typically 4 to 5 nucleotides. In certain embodiments, a tetraloop comprises or consists of 3, 4, 5, or 6 nucleotides, which may or may not be modified (e.g., which may or may not be conjugated to a targeting moiety). In one embodiment, a tetraloop consists of 4 nucleotides. Any nucleotide may be used in the tetraloop and standard IUPAC-IUB symbols for such nucleotides may be used as described in Cornish-Bowden NUCLEIC ACIDS RES. (1985); 13: 3021-30. For example, the letter “N” may be used to mean that any base may be in that position, the letter “R” may be used to show that A (adenine) or G (guanine) may be in that position, and “B” may be used to show that C (cytosine), G (guanine), or T (thymine) may be in that position. Examples of tetraloops include the UNCG family of tetraloops (e.g., UUCG), the GNRA family of tetraloops (e.g., GAAA), and the CUUG tetraloop (Woese et al. PROC. NATL. ACAD. SCI. USA (1990); 87: 8467-71; Antao et al. NUCLEIC ACIDS RES. (1991); 19: 5901-05). Examples of DNA tetraloops include the d(GNNA) family of tetraloops (e.g., d(GTTA), the d(GNRA)) family of tetraloops, the d(GNAB) family of tetraloops, the d(CNNG) family of tetraloops, and the d(TNCG) family of tetraloops (e.g., d(TTCG)). See, e.g., Nakano et al. BIOCHEM. (2002); 41: 14281-92; Shinji et al. NIPPON KAGAKKAI KOEN YOKOSHU (2000); 78: 731. In some embodiments, the tetraloop is contained within a nicked tetraloop structure.


As used herein, “treat” or “treating” refers to the act of providing care to a subject in need thereof, for example, by administering a therapeutic agent (e.g., an oligonucleotide herein) to the subject, for purposes of improving the health and/or well-being of the subject with respect to an existing condition (e.g., a disease, disorder) or to prevent or decrease the likelihood of the occurrence of a condition. In some embodiments, treatment involves reducing the frequency or severity of at least one sign, symptom or contributing factor of a condition (e.g., disease, disorder) experienced by a subject.


EXAMPLES

While the disclosure has been described with reference to the specific embodiments set forth in the following Examples, it should be understood by those skilled in the art that various changes may be made, and equivalents may be substituted without departing from the true spirit and scope of the disclosure. Further, the following Examples are offered by way of illustration and are not intended to limit the scope of the disclosure in any manner. In addition, modifications may be made to adapt to a situation, material, composition of matter, process, process step or steps, to the objective, spirit, and scope of the disclosure. All such modifications are intended to be within the scope of the disclosure. Standard techniques well known in the art or the techniques specifically described below were utilized.


Example 1: Preparation of RNAi Oligonucleotides
Oligonucleotide Synthesis and Purification

The oligonucleotides (RNAi oligonucleotides) described in the foregoing Examples are chemically synthesized using methods described herein. Generally, RNAi oligonucleotides are synthesized using solid phase oligonucleotide synthesis methods as described for 19-23mer siRNAs (see, e.g., Scaringe et al. NUCLEIC ACIDS RES. (1990); 18: 5433-41 and Usman et al. J. AM. CHEM. SOC. (1987); 109: 7845-45; see also, U.S. Pat. Nos. 5,804,683; 5,831,071; 5,998,203; 6,008,400; 6,111,086; 6,117,657; 6,353,098; 6,362,323; 6,437,117 and 6,469,158) in addition to using known phosphoramidite synthesis (see, e.g. Hughes and Ellington, COLD SPRING HARB. PERSPECT. BIOL. (2017); 9(1): a023812; Beaucage S. L., Caruthers M. H. Studies on Nucleotide Chemistry V.: Deoxynucleoside Phosphoramidites A New Class of Key Intermediates for Deoxypolynucleotide Synthesis, TETRAHEDRON LETT. (1981); 22: 1859-62. doi:10.1016/S0040-4039(01)90461-7). dsRNAi oligonucleotides having a 19mer core sequence were formatted into constructs having a 25mer sense strand and a 27mer antisense strand to allow for processing by the RNAi machinery. The 19mer core sequence is complementary to a region in the NR1H3 mRNA.


Individual RNA strands were synthesized and HPLC purified according to standard methods (Integrated DNA Technologies; Coralville, Iowa). For example, RNA oligonucleotides were synthesized using solid phase phosphoramidite chemistry, deprotected and desalted on NAP-5 columns (Amersham Pharmacia Biotech; Piscataway, N.J.) using standard techniques (Damha & Olgivie, METHODS MOL. BIOL. (1993); 20: 81-114; Wincott et al. NUCLEIC ACIDS RES. (1995); 23: 2677-84). The oligomers were purified using ion-exchange high performance liquid chromatography (IE-HPLC) on an Amersham Source 15Q column (1.0 cm×25 cm; Amersham Pharmacia Biotech) using a 15 min step-linear gradient. The gradient varied from 90:10 Buffers A:B to 52:48 Buffers A:B, where Buffer A is 100 mM Tris pH 8.5 and Buffer B is 100 mM Tris pH 8.5, 1 M NaCl. Samples were monitored at 260 nm and peaks corresponding to the full-length oligonucleotide species were collected, pooled, desalted on NAP-5 columns, and lyophilized.


The purity of each oligomer was determined by capillary electrophoresis (CE) on a Beckman PACE 5000 (Beckman Coulter, Inc.; Fullerton, Calif.). The CE capillaries have a 100 μm inner diameter and contain ssDNA 100R Gel (Beckman-Coulter). Typically, about 0.6 nmole of oligonucleotide was injected into a capillary, run in an electric field of 444 V/cm, and was detected by UV absorbance at 260 nm. Denaturing Tris-Borate-7 M-urea running buffer was purchased from Beckman-Coulter. Oligoribonucleotides were obtained that were at least 90% pure as assessed by CE for use in experiments described below. Compound identity was verified by matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectroscopy on a Voyager DE™ Biospectometry Work Station (Applied Biosystems; Foster City, Calif.) following the manufacturer's recommended protocol. Relative molecular masses of all oligomers were obtained, often within 0.2% of expected molecular mass.


Preparation of Duplexes

Single strand RNA oligomers were resuspended (e.g., at 100 μM concentration) in duplex buffer consisting of 100 mM potassium acetate, 30 mM HEPES, pH 7.5. Complementary sense and antisense strands were mixed in equal molar amounts to yield a final solution of, for example, 50 μM duplex. Samples were heated to 100° C. for 5′ in RNA buffer (IDT) and were allowed to cool to room temperature before use. The RNAi oligonucleotides were stored at −20° C. Single strand RNA oligomers were stored lyophilized or in nuclease-free water at −80° C.


Example 2: Generation of NR1H3-Targeting Double Stranded RNAi Oligonucleotides

Identification of NR1H3 mRNA Target Sequences


Nuclear Receptor Subfamily 1 Group H Member 3 (NR1H3) is a protein that regulates macrophage function, lipid homeostasis, and inflammation. To generate RNAi oligonucleotide inhibitors of NR1H3 expression, a computer-based algorithm was used to computationally identify NR1H3 mRNA target sequences suitable for assaying inhibition of NR1H3 expression by the RNAi pathway. The algorithm provided RNAi oligonucleotide guide (antisense) strand sequences each having a region of complementarity to a suitable NR1H3 target sequence of human NR1H3 mRNA. Some of the guide strand sequences identified by the algorithm were also complementary to the corresponding NR1H3 target sequence of monkey and/or mouse NR1H3 mRNA. NR1H3 RNAi oligonucleotides comprising a region of complementarity to homologous NR1H3 mRNA target sequences with nucleotide sequence similarity are predicted to have the ability to target homologous NR1H3 mRNAs.


RNAi oligonucleotides (formatted as DsiRNA oligonucleotides) were generated as described in Example 1 for evaluation in vitro. Each DsiRNA was generated with the same modification pattern, and each with a unique guide strand having a region of complementarity to a NR1H3 target sequence identified by the algorithm. Modifications for the sense and anti-sense DsiRNA included the following (X— any nucleotide; m—2′-O-methyl modified nucleotide; r—ribosyl modified nucleotide):


Sense Strand:

rXmXrXmXrXrXrXrXrXrXrXrXrXmXrXmXrXrXrXrXrXrXrXXX


Anti-sense Strand:

mXmXmXmXrXrXrXrXrXrXmXrXmXrXrXrXrXrXrXrXrXrXmXrXmXmXmX


In Vitro Cell-Based Assays

The ability of each of the modified DsiRNA in Table 1 to reduce NR1H3 mRNA was measured using in vitro cell-based assays. Briefly, human Huh-7 cells expressing endogenous human NR1H3 gene were transfected with each of the DsiRNAs listed in Table 1 at 1 nM in separate wells of a multi-well cell-culture plate. Cells were maintained for 24 hours following transfection with the modified DsiRNA, and then the amount of remaining NR1H3 mRNA from the transfected cells was determined using and RT-qPCR assay. The assay used the following primers and probe normalized to the geometric mean of two reference genes HPRT1 and SFRS9: Forward-1198 GTTATAACCGGGAAGACTTTGC (SEQ ID NO:1122); Reverse-1326: TGATAGCAATGAGCAAGGCA (SEQ ID NO: 1123); Probe-1253: ATGGCCCTGGAGAACTCGAAGATG (SEQ ID NO:1124). The primer pair was assayed for % remaining RNA as shown in Table 1. DsiRNAs resulting in less than or equal to 10% NR1H3 mRNA remaining in DsiRNA-transfected cells when compared to mock-transfected cells were considered DsiRNA “hits”. The HuH-7 cell-based assay evaluating the ability of the DsiRNAs listed in Table 1 to inhibit NR1H3 expression identified several candidate DsiRNAs.


Taken together, these results show that DsiRNAs designed to target human NR1H3 mRNA inhibit NR1H3 expression in cells, as determined by a reduced amount of NR1H3 mRNA in DsiRNA-transfected cells relative to control cells. These results demonstrate that the nucleotide sequences comprising the DsiRNA are useful for generating RNAi oligonucleotides to inhibit NR1H3 expression. Further, these results demonstrate that multiple NR1H3 mRNA target sequences are suitable for the RNAi-mediated inhibition of NR1H3 expression.









TABLE 1







In Vitro Screening Results










SED ID
SED ID




NO
NO

NR1H3-F1198











(Sense
(Anti-sense

%



Strand)
Strand)
DsiRNA name
remaining
SEM














1
385
NR1H3-764-784-861
8.9
4.43


2
386
NR1H3-766-786-863
16.25
3.11


3
387
NR1H3-789-809-886
15.08
1.03


4
388
NR1H3-790-810-887
18.74
3.03


5
389
NR1H3-791-811-888
40.34
2.62


6
390
NR1H3-792-812-889
32.44
4.47


7
391
NR1H3-793-813-890
33.77
2.89


8
392
NR1H3-795-815-892
10.87
4.86


9
393
NR1H3-796-816-893
14.94
1.85


10
394
NR1H3-797-817-894
45.07
9.79


11
395
NR1H3-798-818-895
17.91
4.71


12
396
NR1H3-799-819-896
17.87
2.13


13
397
NR1H3-802-822-899
8.47
3.71


14
398
NR1H3-803-823-900
26.43
3.01


15
399
NR1H3-804-824-901
13.60
2.34


16
400
NR1H3-806-826-903
47.05
7.86


17
401
NR1H3-808-828-905
14.07
1.86


18
402
NR1H3-809-829-906
37.06
10.23


19
403
NR1H3-810-830-907
27.90
12.22


20
404
NR1H3-811-831-908
41.69
8.58


21
405
NR1H3-813-833-910
29.81
2.83


22
406
NR1H3-844
22.31
3.43


23
407
NR1H3-895-915-992
13.4
2.84


24
408
NR1H3-898-918-995
21.63
3.63


25
409
NR1H3-915-935
23.64
3.59


26
410
NR1H3-917-937
13.58
3.29


27
411
NR1H3-922-942
21.35
3.75


28
412
NR1H3-924-944
32.89
16.44


29
413
NR1H3-925-945
15.74
4.69


30
414
NR1H3-927-947
26.60
5.18


31
415
NR1H3-928-948
14.55
3.21


32
416
NR1H3-929-949
9.89
1.40


33
417
NR1H3-930-950
26.20
3.86


34
418
NR1H3-931-951
27.44
1.62


35
419
NR1H3-932-952
12.31
6.33


36
420
NR1H3-933-953
13.29
1.84


37
421
NR1H3-941-961
10.08
2.10


38
422
NR1H3-944-964
13.78
1.05


39
423
NR1H3-945-965
27.16
2.75


40
424
NR1H3-946-966
15.99
1.88


41
425
NR1H3-947-967
8.63
3.01


42
426
NR1H3-949-969
17.43
1.64


43
427
NR1H3-951-971
9.66
1.70


44
428
NR1H3-952-972
9.92
1.39


45
429
NR1H3-953-973
21.75
4.12


46
430
NR1H3-1151-1171
18.83
2.78


47
431
NR1H3-1153-1173
78.76
9.71


48
432
NR1H3-1154-1174
45.38
5.78


49
433
NR1H3-1155-1175
23.72
2.37


50
434
NR1H3-1156-1176
23.75
2.37


51
435
NR1H3-1157-1177
67.42
6.83


52
436
NR1H3-1158-1178
17.98
2.57


53
437
NR1H3-1159-1179
17.47
2.49


54
438
NR1H3-1160-1180
9.14
1.61


55
439
NR1H3-1161-1181
22.52
2.41


56
440
NR1H3-1162-1182
10.89
1.66


57
441
NR1H3-1163-1183
38.50
7.62


58
442
NR1H3-1164-1184
23.52
9.14


59
443
NR1H3-1165-1185
22.81
3.68


60
444
NR1H3-1166-1186
23.01
4.64


61
445
NR1H3-1167-1187
50.54
10.76


62
446
NR1H3-1169-1189
15.60
2.02


63
447
NR1H3-1170-1190
22.78
5.79


64
448
NR1H3-1171-1191
80.98
9.76


65
449
NR1H3-1173-1193
16.14
4.16


66
450
NR1H3-1175-1195
45.81
7.47


67
451
NR1H3-1176-1196
18.32
4.59


68
452
NR1H3-1177-1197
26.85
5.22


69
453
NR1H3-1178-1198
63.10
17.52


70
454
NR1H3-1179-1199
12.86
1.65


71
455
NR1H3-1180-1200
20.97
4.62


72
456
NR1H3-1181-1201
16.21
4.23


73
457
NR1H3-1182-1202
30.61
5.64


74
458
NR1H3-1183-1203
30.96
6.72


75
459
NR1H3-1184-1204
23.71
6.05


76
460
NR1H3-1185-1205
14.77
1.30


77
461
NR1H3-1186-1206
19.94
6.28


78
462
NR1H3-1187-1207
14.48
1.77


79
463
NR1H3-1188-1208
37.28
3.76


80
464
NR1H3-1190-1210
38.58
4.63


81
465
NR1H3-1191-1211
15.02
2.19


82
466
NR1H3-1192-1212
51.23
7.43


83
467
NR1H3-1193-1213
17.05
3.23


84
468
NR1H3-1194-1214
31.91
6.24


85
469
NR1H3-1196-1216
32.00
9.03


86
470
NR1H3-1197-1217
8.36
2.55


87
471
NR1H3-1198-1218
29.10
4.48


88
472
NR1H3-1199-1219
13.22
2.89


89
473
NR1H3-1200-1220
8.59
2.38


90
474
NR1H3-1203-1223
15.92
3.29


91
475
NR1H3-1204-1224
5.07
0.83


92
476
NR1H3-1207-1227
3.54
2.18


93
477
NR1H3-1211-1231
1.88
1.19


94
478
NR1H3-1212-1232
17.48
7.55


95
479
NR1H3-1213-1233
8.32
4.17


96
480
NR1H3-1214-1234
16.53
1.70


97
481
NR1H3-1215-1235
11.84
1.93


98
482
NR1H3-1216-1236
9.48
1.67


99
483
NR1H3-1217-1237
11.9
2.34


100
484
NR1H3-1218-1238
8.45
1.98


101
485
NR1H3-1219-1239
6.80
1.35


102
486
NR1H3-1220-1240
3.60
1.88


103
487
NR1H3-1222-1242
8.53
1.67


104
488
NR1H3-1223-1243
12.69
1.63


105
489
NR1H3-1224-1244
6.15
2.42


106
490
NR1H3-1225-1245
9.72
3.87


107
491
NR1H3-1226-1246
47.24
5.54


108
492
NR1H3-1227-1247
13.80
2.63


109
493
NR1H3-1228-1248
6.76
1.78


110
494
NR1H3-1229-1249
8.75
2.71


111
495
NR1H3-1232-1252
36.21
3.20


112
496
NR1H3-1233-1253
20.37
2.75


113
497
NR1H3-1234-1254
18.42
1.50


114
498
NR1H3-1235-1255
16.37
1.48


115
499
NR1H3-1236-1256
58.83
6.78


116
500
NR1H3-1237-1257
16.03
2.29


117
501
NR1H3-1238-1258
19.29
5.59


118
502
NR1H3-1241-1261
12.44
2.25


119
503
NR1H3-1242-1262
29.53
10.05


120
504
NR1H3-1243-1263
6.22
5.33


121
505
NR1H3-1244-1264
5.51
0.94


122
506
NR1H3-1245-1265
15.00
2.82


123
507
NR1H3-1246-1266
10.14
2.84


124
508
NR1H3-1247-1267
13.70
3.55


125
509
NR1H3-1248-1268
37.81
4.12


126
510
NR1H3-1250-1270
10.08
2.10


127
511
NR1H3-1251-1271
6.50
0.47


128
512
NR1H3-1252-1272
3.35
0.65


129
513
NR1H3-1253-1273
14.22
1.35


130
514
NR1H3-1256-1276
8.26
1.63


131
515
NR1H3-1258-1278
7.38
1.26


132
516
NR1H3-1259-1279
4.72
1.13


133
517
NR1H3-1261-1281
4.39
1.31


134
518
NR1H3-1262-1282
27.66
5.46


135
519
NR1H3-1265-1285
3.35
1.10


136
520
NR1H3-1266-1286
4.91
0.83


137
521
NR1H3-1267-1287
21.91
4.48


138
522
NR1H3-1268-1288
21.59
3.96


139
523
NR1H3-1269-1289
11.31
1.44


140
524
NR1H3-1270-1290
9.87
5.24


141
525
NR1H3-1271-1291
6.95
1.9


142
526
NR1H3-1272-1292
7.07
0.99


143
527
NR1H3-1273-1293
11.01
3.72


144
528
NR1H3-1275-1295
18.49
2.31


145
529
NR1H3-1276-1296
17.77
3.25


146
530
NR1H3-1277-1297
18.20
1.62


147
531
NR1H3-1278-1298
9.35
1.70


148
532
NR1H3-1279-1299
8.96
1.60


149
533
NR1H3-1280-1300
19.16
3.95


150
534
NR1H3-1281-1301
12.33
1.94


151
535
NR1H3-1282-1302
40.52
7.51


152
536
NR1H3-1283-1303
15.26
7.23


153
537
NR1H3-1284-1304
37.09
9.79


154
538
NR1H3-1285-1305
29.28
4.88


155
539
NR1H3-1286-1306
41.56
4.92


156
540
NR1H3-1288-1308
68.84
4.13


157
541
NR1H3-1289-1309
34.44
10.86


158
542
NR1H3-1290-1310
17.67
3.83


159
543
NR1H3-1291-1311
21.47
2.26


160
544
NR1H3-1292-1312
41.99
7.72


161
545
NR1H3-1293-1313
13.77
1.40


162
546
NR1H3-1294-1314
20.97
3.76


163
547
NR1H3-1295-1315
14.39
3.21


164
548
NR1H3-1296-1316
28.04
10.25


165
549
NR1H3-1297-1317
12.70
2.20


166
550
NR1H3-1338-1358
22.20
4.81


167
551
NR1H3-1339-1359
7.86
1.5


168
552
NR1H3-1340-1360
4.72
1.10


169
553
NR1H3-1341-1361
11.49
4.26


170
554
NR1H3-1342-1362
4.84
1.18


171
555
NR1H3-1343-1363
17.05
4.21


172
556
NR1H3-1344-1364
13.83
6.27


173
557
NR1H3-1345-1365
9.55
1.22


174
558
NR1H3-1346-1366
4.54
1.14


175
559
NR1H3-1347-1367
6.47
1.87


176
560
NR1H3-1377-1443
46.13
5.08


177
561
NR1H3-1379-1445
28.21
2.69


178
562
NR1H3-1383-1449
27.33
3.23


179
563
NR1H3-1384-1450
27.81
4.58


180
564
NR1H3-1385-1451
44.36
4.37


181
565
NR1H3-1387-1453
15.50
2.5


182
566
NR1H3-1388-1454
46.03
6.42


183
567
NR1H3-1391-1457
20.33
2.82


184
568
NR1H3-1393-1459
27.25
2.95


185
569
NR1H3-1394-1460
11.31
2.71


186
570
NR1H3-1395-1461
30.82
3.24


187
571
NR1H3-1396-1462
34.98
4.45


188
572
NR1H3-1397-1463
41.12
4.28


189
573
NR1H3-1398-1464
14.14
2.79


190
574
NR1H3-1399-1465
14.46
2.61


191
575
NR1H3-1400-1466
49.48
5.89


192
576
NR1H3-1401-1467
21.19
3.39


193
577
NR1H3-1402-1468
14.17
2.73


194
578
NR1H3-1403-1469
18.25
1.29


195
579
NR1H3-1404-1470
34.21
2.29


196
580
NR1H3-1406-1472
46.79
7.22


197
581
NR1H3-1407-1473
13.59
2.47


198
582
NR1H3-1408-1474
44.63
5.37


199
583
NR1H3-1410-1476
43.93
9.37


200
584
NR1H3-1411-1477
28.12
4.11


201
585
NR1H3-1412-1478
50.22
11.35


202
586
NR1H3-1413-1479
45.56
6.23


203
587
NR1H3-1414-1480
56.42
9.61


204
588
NR1H3-1415-1481
32.43
10.32


205
589
NR1H3-1416-1482
16.66
2.27


206
590
NR1H3-1417-1483
31.84
4.71


207
591
NR1H3-1418-1484
7.07
0.80


208
592
NR1H3-1419-1485
69.83
8.81


209
593
NR1H3-1420-1486
16.01
5.34


210
594
NR1H3-1421-1487
38.29
6.31


211
595
NR1H3-1422-1488
80.48
13.59


212
596
NR1H3-1423-1489
9.79
1.47


213
597
NR1H3-1424-1490
9.36
1.84


214
598
NR1H3-1425-1491
22.14
3.77


215
599
NR1H3-1426-1492
9.86
2.14


216
600
NR1H3-1427-1493
18.88
6.80


217
601
NR1H3-1428-1494
17.55
5.52


218
602
NR1H3-1429-1495
2.77
1.08


219
603
NR1H3-1430-1496
19.29
3.14


220
604
NR1H3-1431-1497
8.66
3.71


221
605
NR1H3-1432-1498
19.76
3.07


222
606
NR1H3-1433-1499
3.37
2.29


223
607
NR1H3-1434-1500
77.93
11.83


224
608
NR1H3-1435-1501
14.53
5.77


225
609
NR1H3-1436-1502
11.42
2.45


226
610
NR1H3-1437-1503
4.97
1.57


227
611
NR1H3-1438-1504
7.40
1.89


228
612
NR1H3-1439-1505
3.26
0.97


229
613
NR1H3-1440-1506
40.21
5.31


230
614
NR1H3-1442-1508
50.09
3.47


231
615
NR1H3-1443-1509
11.50
5.54


232
616
NR1H3-1444-1510
29.36
15.66


233
617
NR1H3-1445-1511
47.59
6.76


234
618
NR1H3-1446-1512
2.37
0.65


235
619
NR1H3-1447-1513
10.29
4.95


236
620
NR1H3-1448-1514
45.74
4.52


237
621
NR1H3-1449-1515
35.27
4.39


238
622
NR1H3-1450-1516
39.10
5.63


239
623
NR1H3-1451-1517
9.58
2.83


240
624
NR1H3-1452-1518
64.45
15.14


241
625
NR1H3-1453-1519
14.78
2.76


242
626
NR1H3-1454-1520
5.01
2.14


243
627
NR1H3-1455-1521
21.75
3.59


244
628
NR1H3-1456-1522
9.11
2.01


245
629
NR1H3-1457-1523
7.52
3.29


246
630
NR1H3-1459-1525
7.81
1.75


247
631
NR1H3-1460-1526
4.57
1.07


248
632
NR1H3-1461-1527
30.77
4.42


249
633
NR1H3-1462-1528
6.29
1.92


250
634
NR1H3-1463-1529
2.58
0.85


251
635
NR1H3-1465-1531
4.17
1.14


252
636
NR1H3-1466-1532
15.04
1.90


253
637
NR1H3-1468-1534
14.47
1.37


254
638
NR1H3-1469-1535
14.04
2.26


255
639
NR1H3-1471-1537
14.94
1.55


256
640
NR1H3-1472-1538
45.97
3.01


257
641
NR1H3-1473-1539
19.37
8.93


258
642
NR1H3-1474-1540
9.53
2.70


259
643
NR1H3-1475-1541
3.21
1.94


260
644
NR1H3-1476-1542
11.27
4.12


261
645
NR1H3-1477-1543
14.30
2.78


262
646
NR1H3-1478-1544
13.06
3.66


263
647
NR1H3-1479-1545
3.97
0.86


264
648
NR1H3-1480-1546
4.82
1.41


265
649
NR1H3-1481-1547
2.81
0.57


266
650
NR1H3-1483-1549
5.56
1.60


267
651
NR1H3-1484-1550
20.18
2.39


268
652
NR1H3-1485-1551
3.52
2.10


269
653
NR1H3-1486-1552
13.41
1.81


270
654
NR1H3-1487-1553
25.35
3.42


271
655
NR1H3-1488-1554
28.45
6.63


272
656
NR1H3-1489-1555
15.31
5.00


273
657
NR1H3-1491-1557
6.33
1.03


274
658
NR1H3-1492-1558
20.75
4.42


275
659
NR1H3-1494-1560
24.97
4.76


276
660
NR1H3-1505-1571
38.74
5.88


277
661
NR1H3-1507-1573
9.42
2.29


278
662
NR1H3-1508-1574
36.57
6.54


279
663
NR1H3-1509-1575
29.82
5.45


280
664
NR1H3-1510-1576
19.45
3.79


281
665
NR1H3-1511-1577
23.73
3.3


282
666
NR1H3-1512-1578
42.41
7.68


283
667
NR1H3-1513-1579
33.80
5.58


284
668
NR1H3-1514-1580
26.85
4.79


285
669
NR1H3-1515-1581
3.95
0.84


286
670
NR1H3-1516-1582
16.48
3.36


287
671
NR1H3-1517-1583
4.38
1.57


288
672
NR1H3-1518-1584
3.43
1.32


289
673
NR1H3-1519-1585
5.73
1.72


290
674
NR1H3-1520-1586
14.37
1.95


291
675
NR1H3-1521-1587
15.60
9.44


292
676
NR1H3-1522-1588
14.40
3.9


293
677
NR1H3-1523-1589
9.60
2.11


294
678
NR1H3-1525-1591
13.51
4.15


295
679
NR1H3-1526-1592
50.59
16.74


296
680
NR1H3-1527-1593
8.47
4.27


297
681
NR1H3-1528-1594
25.44
3.59


298
682
NR1H3-1529-1595
12.55
2.77


299
683
NR1H3-1530-1596
11.6
3.15


300
684
NR1H3-1531-1597
6.14
2.83


301
685
NR1H3-1532-1598
15.35
4.55


302
686
NR1H3-1533-1599
3.13
3


303
687
NR1H3-1534-1600
8.51
3.07


304
688
NR1H3-1535-1601
1.48
0.67


305
689
NR1H3-1536-1602
30.02
10.69


306
690
NR1H3-1537-1603
17.55
6.31


307
691
NR1H3-1538-1604
21.90
1.81


308
692
NR1H3-1539-1605
28.62
6.45


309
693
NR1H3-1540-1606
19.29
5.08


310
694
NR1H3-1541-1607
10.51
2.94


311
695
NR1H3-1542-1608
8.39
6.98


312
696
NR1H3-1543-1609
5.68
3.86


313
697
NR1H3-1544-1610
23.78
4.02


314
698
NR1H3-1545-1611
3.93
1.19


315
699
NR1H3-1546-1612
11.55
1.89


316
700
NR1H3-1547-1613
16.77
3.13


317
701
NR1H3-1548-1614
10.86
7.45


318
702
NR1H3-1549-1615
33.40
8.27


319
703
NR1H3-1550-1616
13.98
3.23


320
704
NR1H3-1551-1617
32.11
9.43


321
705
NR1H3-1553-1619
43.83
11.06


322
706
NR1H3-1554-1620
5.16
1.29


323
707
NR1H3-1555-1621
89.05
22.10


324
708
NR1H3-1556-1622
33.15
4.79


325
709
NR1H3-1558-1624
15.27
4.11


326
710
NR1H3-1559-1625
15.15
3.47


327
711
NR1H3-1560-1626
34.65
4.83


328
712
NR1H3-1561-1627
63.67
7.04


329
713
NR1H3-1562-1628
16.78
10.54


330
714
NR1H3-1563-1629
26.54
9.20


331
715
NR1H3-1564-1630
34.34
14.27


332
716
NR1H3-1565-1631
89.42
16.51


333
717
NR1H3-1567-1633
66.56
5.80


334
718
NR1H3-1569-1635
39.41
11.96


335
719
NR1H3-1570-1636
25.11
4.45


336
720
NR1H3-1572-1638
24.43
4.3


337
721
NR1H3-1573-1639
13.36
2.16


338
722
NR1H3-1574-1640
82.95
11.20


339
723
NR1H3-1577-1643
35.42
6.60


340
724
NR1H3-1579-1645
18.88
2.81


341
725
NR1H3-1580-1646
21.56
5.67


342
726
NR1H3-1581-1647
4.90
1.52


343
727
NR1H3-1582-1648
10.89
3.83


344
728
NR1H3-1583-1649
13.79
6.45


345
729
NR1H3-1584-1650
16.62
7.10


346
730
NR1H3-1585-1651
5.99
2.91


347
731
NR1H3-1586-1652
3.86
0.94


348
732
NR1H3-1587-1653
4.72
0.90


349
733
NR1H3-1588-1654
2.35
0.39


350
734
NR1H3-1589-1655
47.09
6.4


351
735
NR1H3-1590-1656
12.18
2.49


352
736
NR1H3-1591-1657
7.90
3.08


353
737
NR1H3-1592-1658
13.57
3.13


354
738
NR1H3-1593-1659
31.19
18.86


355
739
NR1H3-1656-1720
31.57
13.68


356
740
NR1H3-1657-1721
21.24
4.73


357
741
NR1H3-1658-1722
15.81
4.89


358
742
NR1H3-1659-1723
12.33
4.79


359
743
NR1H3-1660-1724
22.98
7.43


360
744
NR1H3-1661-1725
9.37
3.58


361
745
NR1H3-1662-1726
8.29
2.01


362
746
NR1H3-1663-1727
4.60
1.56


363
747
NR1H3-1664-1728
16.48
1.97


364
748
NR1H3-1665-1729
17.41
2.6


365
749
NR1H3-1666-1730
23.86
4.49


366
750
NR1H3-1667-1731
23.67
5.80


367
751
NR1H3-1668-1732
27.34
4.76


368
752
NR1H3-1669-1733
9.25
2.46


369
753
NR1H3-1671-1735
5.99
1.88


370
754
NR1H3-1677-1741
28.16
4.53


371
755
NR1H3-1679-1743
10.30
2.96


372
756
NR1H3-1680-1744
13.50
3.80


373
757
NR1H3-1681-1745
12.10
2.74


374
758
NR1H3-1682-1746
17.59
5.47


375
759
NR1H3-1683-1747
17.57
14.50


376
760
NR1H3-1684-1748
3.97
0.47


377
761
NR1H3-1685-1749
7.55
2.88


378
762
NR1H3-1686-1750
8.97
4.18


379
763
NR1H3-1687-1751
16.24
8.75


380
764
NR1H3-1728-1792
6.44
1.49


381
765
NR1H3-1729-1793
8.96
3.52


382
766
NR1H3-1730-1794
15.41
8.06


383
767
NR1H3-1731-1795
5.40
2.04


384
768
NR1H3-1732-1796
3.85
0.85









Example 3: GalNAc-Conjugated NR1H3 RNAi Oligonucleotides Inhibit Human NR1H3 in Vitro

The in vitro screening assay in Example 2 validated the ability of NR1H3-targeting DsiRNA to knockdown NR1H3 mRNA. To further evaluate the ability of NR1H3 RNAi oligonucleotides to inhibit NR1H3 mRNA expression, GalNAc-conjugated NR1H3 oligonucleotides were generated using sequences identified by the algorithm in Example 2.


Specifically, a subset of the DsiRNAs identified by the algorithm were used to generate corresponding double-stranded RNAi oligonucleotides comprising a nicked tetraloop GalNAc-conjugated structure (referred to herein as “GalNAc-conjugated NR1H3 oligonucleotides” or “GalNAc-NR1H3 constructs”) having a 36-mer passenger strand and a 22-mer guide strand (Table 3). Further, two nucleotide sequences comprising the passenger strand and guide strand have a distinct pattern of modified nucleotides and phosphorothioate linkages (sense strand SEQ ID Nos: 945-1032; antisense SEQ ID Nos:1037 and 1086). Three of the nucleotides comprising the tetraloop were each conjugated to a GalNAc moiety (CAS #14131-60-3). The modification pattern of each strand is illustrated below:


Sense Strand: 5′-mX-S-mX-mX-mX-mX-mX-mX-fX-fX-fX-fX[-mX-]16-[ademX-GalNAc]-[ademX-GalNAc]-[ademX-GalNAc]-mX-mX-mX-mX-mX-mX-3′.


Hybridized to:
Antisense Strand: 5′-[MePhosphonate-40-mX]-S-fX-S-fX-fX-fX-mX-fX-mX-mX-fX-mX-mX-mX-fX-mX-mX-mX-mX-mX-mX-S-mX-S-mX-3′.

(Modification key: Table 2 and [ademX-GalNAc]=GalNAc-conjugated nucleotide) Or, represented as:


Sense Strand: [mXs][mX][mX][mX][mX][mX][mX][fX][fX][fX][fX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][ademA-GalNAc][ademA-GalNAc][ademA-GalNAc][mX][mX][mX][mX][mX][mX]


Hybridized to:

Antisense Strand: [MePhosphonate-4O-mXs][fXs][fX][fX][fX][mX][fX][mX][mX][fX][mX][mX][mX][fX][mX][mX][mX][mX][mX][mXs][mXs][mX]


The remainder of the nucleotide sequences comprising the passenger strand and guide strand have a second distinct pattern of modified nucleotides and phosphorothioate linkages (sense strand SEQ ID Nos: 945-1032; antisense SEQ ID NOs: 1033-1036, 1038-1085 and 1087-1120). Three of the nucleotides comprising the tetraloop were each conjugated to a GalNAc moiety (CAS #14131-60-3). The modification pattern of each strand is illustrated below:


Sense Strand: 5′-mX-S-mX-mX-mX-mX-mX-mX-fX-fX-fX-fX[-mX-]16-[ademX-GalNAc]-[ademX-GalNAc]-[ademX-GalNAc]-mX-mX-mX-mX-mX-mX-3′.


Hybridized to:
Antisense Strand: 5′-[MePhosphonate-40-mX]-S-fX-S-fX-S-fX-fX-mX-fX-mX-mX-fX-mX-mX-mX-fX-mX-mX-mX-mX-mX-mX-S-mX-S-mX-3′.

(Modification key: Table 2 and [ademX-GalNAc]=GalNAc-conjugated nucleotide) Or, represented as:


Sense Strand: [mXs][mX][mX][mX][mX][mX][mX][fX][fX][fX][fX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][mX][ademA-GalNAc][ademA-GalNAc][ademA-GalNAc][mX][mX][mX][mX][mX][mX]


Hybridized to:

Antisense Strand: [MePhosphonate-40-mXs][fXs][fXs][fX][fX][mX][fX][mX][mX][fX][mX][mX][mX][fX][mX][mX][mX][mX][mX][mXs][mXs][mX]












(Modification key: Table 2).








Symbol
Modification/linkage





Key 1



mX
2′-O-methyl modified nucleotide


fX
2'-fluoro modified nucleotide


-S-
phosphorothioate linkage


-
phosphodiester linkage


[MePhosphonate-4O-mX]
5′-methoxyphosphonate-4′-oxy modified



nucleotide


ademA-GalNAc
GalNAc attached to an adenine nucleotide


Key 2



[mXs]
2′-O-methyl modified nucleotide with a



phosphorothioate linkage to the neighboring



nucleotide


[fXs]
2′-fluoro modified nucleotide with a



phosphorothioate linkage to the neighboring



nucleotide


[mX]
2′-O-methyl modified nucleotide with



phosphodiester linkages to neighboring



nucleotides


[fX]
2′-fluoro modified nucleotide with



phosphodiester linkages to neighboring



nucleotides









GalNAc-NR1H3 constructs were used to evaluate inhibition efficacy in cells expressing human NR1H3. Specifically, Huh-7 cells were transfected with the GalNAc-NR1H3 constructs using methods described in Example 2. Results are provided in Table 3, which demonstrate successful knock-down of human NR1H3 mRNA with several constructs.









TABLE 3







GalNAc-Conjugated Human NR1H3 RNAi Oligonucleotides












SED ID





SED ID
NO





NO
(modified





(modified
Anti-





Sense
sense

%



Strand)
Strand)
DsiRNA name
remaining
SEM














945
1033
NR1H3-763-783-860
109.29
17.94


946
1034
NR1H3-765-785-862
57.30
15.34


947
1035
NR1H3-767-787-864
31.55
7.72


948
1036
NR1H3-768-788-865
89.93
18.03


949
1037
NR1H3-769-789-866
18.84
4.39


950
1038
NR1H3-794-814-891
40.26
12.66


951
1039
NR1H3-1152-1172-1249
74.17
12.97


952
1040
NR1H3-1189-1209-1286
47.09
11.14


953
1041
NR1H3-1195-1215-1292
41.72
9.81


954
1042
NR1H3-1200-1220-1297
102.50
25.27


955
1043
NR1H3-1201-1221-1298
28.78
4.63


956
1044
NR1H3-1202-1222-1299
16.81
5.40


957
1045
NR1H3-1203-1223-1300
11.40
3.12


958
1046
NR1H3-1204-1224-1301
10.27
9.33


959
1047
NR1H3-1205-1225-1302
15.93
5.10


960
1048
NR1H3-1206-1226-1303
59.82
14.86


962
1050
NR1H3-1208-1228-1305
10.94
1.83


963
1051
NR1H3-1209-1229-1306
101.62
23.09


964
1052
NR1H3-1210-1230-1307
25.85
6.52


965
1053
NR1H3-1211-1231-1308
29.68
4.19


966
1054
NR1H3-1212-1232-1309
39.90
13.07


967
1055
NR1H3-1213-1233-1310
15.16
4.91


968
1056
NR1H3-1214-1234-1311
25.26
16.03


970
1058
NR1H3-1221-1241-1318
23.77
6.65


973
1061
NR1H3-1249-1269-1346
45.75
8.54


975
1063
NR1H3-1254-1274-1351
36.79
10.59


976
1064
NR1H3-1255-1275-1352
16.79
4.54


977
1065
NR1H3-1256-1276-1353
55.93
16.15


978
1066
NR1H3-1257-1277-1354
90.17
15.01


980
1068
NR1H3-1260-1280-1357
17.80
2.89


981
1069
NR1H3-1261-1281-1358
81.65
24.27


982
1070
NR1H3-1263-1283-1360
15.12
5.37


983
1071
NR1H3-1264-1284-1361
25.69
6.43


986
1074
NR1H3-1405-1471-1502
40.51
10.03


987
1075
NR1H3-1409-1475-1506
43.45
7.797


993
1081
NR1H3-1458-1524-1555
6.54
1.345


995
1083
NR1H3-1464-1530-1561
53.64
10.29


996
1084
NR1H3-1465-1531-1562
33.78
10.83


997
1085
NR1H3-1467-1533-1564
33.29
19.93


998
1086
NR1H3-1469-1535-1566
20.17
7.60


999
1087
NR1H3-1470-1536-1567
34.02
6.95


1002
1088
NR1H3-1480-1546-1577
31.73
6.53


1004
1092
NR1H3-1482-1548-1579
12.18
3.56


1009
1097
NR1H3-1524-1590-1621
28.36
10.49


1018
1106
NR1H3-1594-1660-1691
30.67
13.85


1019
1107
NR1H3-1595-1661-1692
50.80
8.90


1020
1108
NR1H3-1596-1662
56.02
19.49


1022
1110
NR1H3-1670-1734
10.71
5.09


1024
1112
NR1H3-1672-1736
25.94
11.33


1025
1113
NR1H3-1673-1737
53.70
17.23


1026
1114
NR1H3-1674-1738
14.48
2.82


1027
1115
NR1H3-1675-1739-1766
55.04
10.59


1028
1116
NR1H3-1676-1740-1767
33.47
12.90


1029
1117
NR1H3-1678-1742-1769
364.22
31.30









Example 4: RNAi Oligonucleotide Inhibition of NR1H3 Expression in Mice In Vivo

The in vitro screening assays in Examples 2 and 3 validated the ability of NR1H3-targeting oligonucleotides to knock-down target mRNA. To confirm the ability of the RNAi oligonucleotides to knockdown NR1H3 in vivo, an HDI mouse model was used. Two sets of GalNAc-conjugated NR1H3 oligonucleotides were evaluated. Specifically, a set of GalNAc-conjugated NR1H3 oligonucleotides were generated from DsiRNA screened in Example 2 (as shown in Table 4) and the GalNAc-conjugated NR1H3 oligonucleotides from Example 3 (as shown in Table 5). Both sets of constructs were evaluated in mice engineered to transiently express human NR1H3 mRNA in hepatocytes of the mouse liver. Briefly, 6-8-week-old female CD-1 mice (n=4-5) were subcutaneously administered the indicated GalNAc-conjugated NR1H3 oligonucleotides at a dose of 2 mg/kg formulated in PBS. A control group of mice (n=5) were administered only PBS. Three days later (72 hours), the mice were hydrodynamically injected (HDI) with a DNA plasmid encoding the full human NR1H3 gene (25 μg) under control of a ubiquitous cytomegalovirus (CMV) promoter sequence. One day after introduction of the DNA plasmid, liver samples from HDI mice were collected. Total RNA derived from these HDI mice were subjected to qRT-PCR analysis to determine NR1H3 mRNA levels as described in Example 2. mRNA levels were measured for both human and mouse mRNA. The values were normalized for transfection efficiency using the NeoR gene included on the DNA plasmid.









TABLE 4







GalNAc-Conjugated Human NR1H3 RNAi Oligonucleotides for HDI


screen












Unmodified
Unmodified
Modified
Modified



Sense Strand
Antisense
Sense Strand
Antisense



(SED ID
strand
(SED ID
strand



NO)
(SED ID NO)
NO)
(SED ID NO)














NR1H3-1207-
823
911
961
1049


1227






NR1H3-1220-
824
912
969
1057


1240






NR1H3-1224-
825
913
971
1059


1244






NR1H3-1244-
826
914
972
1060


1264






NR1H3-1252-
827
915
974
1062


1272






NR1H3-1259-
828
916
979
1067


1279






NR1H3-1265-
829
917
984
1072


1285






NR1H3-1266-
830
918
985
1073


1286






NR1H3-1429-
831
919
988
1076


1495






NR1H3-1433-
832
920
989
1077


1499






NR1H3-1437-
833
921
990
1078


1503






NR1H3-1439-
834
922
991
1079


1505






NR1H3-1446-
835
923
992
1080


1512






NR1H3-1463-
836
924
994
1082


1529






NR1H3-1475-
837
925
1000
1088


1541






NR1H3-1479-
838
926
1001
1089


1545






NR1H3-1481-
839
927
1003
1091


1547






NR1H3-1485-
840
928
1005
1093


1551






NR1H3-1515-
1537
929
1006
1094


1581






NR1H3-1517-
842
930
1007
1095


1583






NR1H3-1518-
843
931
1008
1096


1584






NR1H3-1533-
844
932
1010
1098


1599






NR1H3-1535-
845
933
1011
1099


1601






NR1H3-1545-
846
934
1012
1100


1611






NR1H3-1554-
847
935
1013
1101


1620






NR1H3-1581-
848
936
1014
1102


1647






NR1H3-1586-
849
937
1015
1103


1652






NR1H3-1587-
850
938
1016
1104


1653






NR1H3-1588-
851
939
1017
1105


1654






NR1H3-1663-
852
940
1021
1109


1727






NR1H3-1671-
853
941
1023
1111


1735






NR1H3-1684-
854
942
1030
1118


1748






NR1H3-1731-
855
943
1031
1119


1795






NR1H3-1732-
856
944
1032
1120


1796




















TABLE 5







GalNAc-Conjugated Human NR1H3 RNAi Oligonucleotides for HDI


screen












Unmodified
Unmodified
Modified
Modified



Sense Strand
Antisense
Sense Strand
Antisense



(SED ID
strand
(SED ID
strand



NO)
(SED ID NO)
NO)
(SED ID NO)














NR1H3-763-
769
857
945
1033


783-860






NR1H3-765-
770
858
946
1034


785-862






NR1H3-767-
771
859
947
1035


787-864






NR1H3-768-
772
860
948
1036


788-865






NR1H3-769-
773
861
949
1037


789-866






NR1H3-794-
774
862
950
1038


814-891






NR1H3-1152-
775
863
951
1039


1172-1249






NR1H3-1189-
776
864
952
1040


1209-1286






NR1H3-1195-
777
865
953
1041


1215-1292






NR1H3-1200-
778
866
954
1042


1220-1297






NR1H3-1201-
779
867
955
1043


1221-1298






NR1H3-1202-
780
868
956
1044


1222-1299






NR1H3-1203-
781
869
957
1045


1223-1300






NR1H3-1204-
782
870
958
1046


1224-1301






NR1H3-1205-
783
871
959
1047


1225-1302






NR1H3-1206-
784
872
960
1048


1226-1303






NR1H3-1208-
785
873
962
1050


1228-1305






NR1H3-1209-
786
874
963
1051


1229-1306






NR1H3-1210-
787
875
964
1052


1230-1307






NR1H3-1211-
788
876
965
1053


1231-1308






NR1H3-1212-
789
877
966
1054


1232-1309






NR1H3-1213-
790
878
967
1055


1233-1310






NR1H3-1214-
791
879
968
1056


1234-1311






NR1H3-1221-
792
880
970
1058


124 1-13 18






NR1H3-1249-
793
881
973
1061


1269-1346






NR1H3-1254-
794
882
975
1063


1274-1351






NR1H3-1255-
795
883
976
1064


1275-1352






NR1H3-1256-
796
884
977
1065


1276-1353






NR1H3-1257-
797
885
978
1066


1277-1354






NR1H3-1260-
798
886
980
1068


1280-1357






NR1H3-1261-
799
887
981
1069


128 1-13 58






NR1H3-1263-
800
888
982
1070


1283-1360






NR1H3-1264-
801
889
983
1071


1284-1361






NR1H3-1405-
802
890
986
1074


1471-1502






NR1H3-1409-
803
891
987
1075


1475-1506






NR1H3-1458-
804
892
993
1081


1524-1555






NR1H3-1464-
805
893
995
1083


1530-1561






NR1H3-1465-
806
894
996
1084


1531-1562






NR1H3-1467-
807
895
997
1085


1533-1564






NR1H3-1469-
808
896
998
1086


1535-1566






NR1H3-1470-
809
897
999
1087


1536-1567






NR1H3-1480-
810
898
1002
1090


1546-1577






NR1H3-1482-
811
899
1004
1092


1548-1579






NR1H3-1524-
812
900
1009
1097


1590-1621






NR1H3-1594-
813
901
1018
1106


1660-1691






NR1H3-1595-
814
902
1019
1107


1661-1692






NR1H3-1596-
815
903
1020
1108


1662






NR1H3-1670-
816
904
1022
1110


1734






NR1H3-1672-
817
905
1024
1112


1736






NR1H3-1673-
818
906
1025
1113


1737






NR1H3-1674-
819
907
1026
1114


1738






NR1H3-1675-
820
908
1027
1115


1739-1766






NR1H3-1676-
821
909
1028
1116


1740-1767






NR1H3-1678-
822
910
1029
1117


1742-1769













The results in FIG. 1B and FIG. 2 demonstrate that GalNAc-conjugated NR1H3 oligonucleotides designed to target human NR1H3 mRNA successfully inhibited human NR1H3 mRNA expression in HDI mice, as determined by a reduction in the amount of human NR1H3 mRNA expression in liver samples from HDI mice treated with GalNAc-conjugated NR1H3 oligonucleotides relative to control HDI mice treated with only PBS. Benchmark controls (NR1H3-769 and NR1H3-1469), which were selected from a prior sequence screening, were used to confirm successful knock-down.


The GalNAc-conjugated NR1H3 oligonucleotides tested in FIG. 1B and FIG. 2 were further validated in repeat assays as shown in FIGS. 3 and 4 using constructs from Table 4 and Table 5. The assays verified knock-down efficiency of each GalNAc-conjugated NR1H3 oligonucleotide, and four constructs were selected for further analysis in non-human primates (NHP).


Example 5: RNAi Oligonucleotide Inhibition of NR1H3 Expression in Non-human Primates In Vivo

Effective GalNAc-NR1H3 constructs identified in the HDI mouse studies were assayed for targeting efficiency in non-human primates. Specifically, GalNAc-conjugated NR1H3 oligonucleotides listed in Table 6 were evaluated in non-naïve cynomolgus monkeys (Macaca fascicularis).









TABLE 6







GalNAc Constructs evaluated in non-human primate










Modified Sense
Modified



strand
Antisense strand



(SED ID NO)
(SED ID NO)












NR1H3-1209-1229-
963
1051


1306




NR1H3-1210-1230-
964
1052


1307




NR1H3-1515-1581
1006
1094


NR1H3-1594-1660-
1018
1106


1691











In this study, the monkeys were grouped so that their mean body weights (about 5.4 kg) were comparable between the control and experimental groups. Each cohort contained at least two female and at least two male subjects. The GalNAc-conjugated NR1H3 oligonucleotides were administered subcutaneously at a dose of 1 or 4 mg/kg on Study Day 0, 28, 56, and 112 as outlined in FIG. 5. Blood samples and liver biopsies were collected as outlined in Table 7 and FIG. 5.









TABLE 7







Treatment plan for NHP study















Dose









(mg/
Dos-

DP
Blood
Liver



Group
kg)
ing
GalXC
Number
Collection
Biopsy
N





A
N/A
sc
PBS
N/A
−8, 0, 14,
−8, 28,
5







28, 56, 112
56, 112



B
1
sc
NR1H3-1209-
DP18987P:
−8, 0, 14,
28, 56,
5





1229-1306
DP18986G
28, 56, 112
112



C
4
sc
NR1H3-1209-
DP18987P:
−8, 0, 14,
−8, 28,
5





1229-1306
DP18986G
28, 56, 112
56, 112



D
1
sc
NR1H3-1210-
DP18989P:
−8, 0, 14,
28, 56,
5





1230-1307
DP18988G
28, 56, 112
112



E
4
sc
NR1H3-1210-
DP18989P:
−8, 0, 14,
−8, 28,
5





1230-1307
DP18988G
28, 56, 112
56, 112



F
1
sc
NR1H3-1515-
DP20645P:
−8, 0, 14,
28, 56,
5





1581
DP20644G
28, 56, 112
112



G
4
sc
NR1H3-1515-
DP20645P:
−8, 0, 14,
−8, 28,
5





1581
DP20644G
28, 56, 112
56, 112



H
1
sc
NR1H3-1594-
DP19040P:
−8, 0, 14,
28, 56,
4





1660-1691
DP19039G
28, 56, 112
112



I
4
sc
NR1H3-1594-
DP19040P:
−8, 0, 14,
−8, 28,
5





1660-1691
DP19039G
28, 56, 112
56, 112









At each time point, total RNA derived from the liver biopsy samples was subjected to qRT-PCR analysis to measure NR1H3 mRNA in oligonucleotide-treated monkeys relative to those treated with a comparable volume of PBS. To normalize the data, the measurements were made relative to the reference gene, PPIB (Rh02802984_m1 (Taqman)). The following SYBR assays purchased from Integrated DNA Technologies were used to evaluate gene expressions: Forward-942: GTCTCTGTGCAGGAGATAGTTG (SEQ ID NO: 1517), Reverse-1399: GGAGGCTCACCAGTTTCATTA (SEQ ID NO: 1518). As shown in Table 8 (Day 28), treating NHPs with the GalNAc-conjugated NR1H3 oligonucleotides listed in Table 6 inhibited NR1H3 expression in the liver, as determined by a reduced amount of NR1H3 mRNA in liver samples from oligonucleotide-treated NHPs relative to NHPs treated with PBS. Days 56 and 112 were also measured (Table 8). These results demonstrate that treating NHPs with the GalNAc-conjugated NR1H3 oligonucleotides reduces the amount of NR1H3 mRNA in the liver in a dose dependent manner.









TABLE 8







NR1H3 mRNA remaining after treatment with the indicated


NR1H3-GalNAc in the liver from the oligonucleotide-treated NHP









NR1H3 Gene Expression (% Time-Matched PBS)














−1209
−1210
−1515
−1594


















1
4
1
4
1
4
1
4




mg/
mg/
mg/
mg/
mg/
mg/
mg/
mg/



PBS
kg
kg
kg
kg
kg
kg
kg
kg










Day 28
















Animal 1
107.3
58.6
35.6
60.1
45.1
95.8
55.4
111.6
80.4


Animal 2
116.6
62.4
27.8
48.5
34.7
101.3
NS
108.3
103.6


Animal 3
122.1
79.4
44.5
73.8
35.7
111.8
74.1
145.5
45.9


Animal 4
77.4
78.5
50.5
65.1
27.5
70.0
45.1
195.4
73.2


Animal 5
76.6
89.2
37.4
77.5
45.2
78.9
34.9
NS
68.5


Average
100.0
73.6
39.2
65.0
37.6
91.6
52.4
140.2
74.3


SEM
9.7
5.7
3.9
5.1
3.4
7.6
8.4
20.2
9.3







Day 56
















Animal 1
96.7
72.9
29.0
43.7
39.0
59.7
30.0
67.7
78.2


Animal 2
115.0
60.1
29.7
75.9
32.1
68.7
NS
85.1
103.4


Animal 3
87.1
52.7
32.6
36.8
40.4
48.1
45.0
104.3
70.0


Animal 4
103.4
34.9
45.0
51.9
26.9
43.6
37.3
76.2
72.1


Animal 5
97.8
45.9
32.3
55.9
36.0
47.1
31.1
NS
72.4


Average
100.0
53.3
33.7
52.8
34.9
53.4
35.9
83.3
79.2


SEM
4.6
6.4
2.9
6.6
2.5
4.7
3.4
7.8
6.2







Day 112
















Animal 1
113.2
44.2
27.3
34.4
33.1
52.8
46.8
56.6
34.8


Animal 2
106.6
56.2
21.7
42.8
33.0
36.2
NS
57.9
31.2


Animal 3
100.2
59.6
22.1
33.4
29.6
46.2
45.7
48.5
44.2


Animal 4
103.1
47.8
45.0
44.9
33.1
44.1
44.9
65.7
32.1


Animal 5
77.0
55.9
34.4
45.3
32.1
52.6
37.6
NS
33.6


Average
100.0
52.7
30.1
40.2
32.2
46.4
43.8
57.2
35.2


SEM
6.2
2.9
4.4
2.6
0.7
3.1
2.1
3.5
2.3





NS = no sample






To confirm if the GalNAc conjugated NR1H3 were specific targeting NR1H3, both NR1H3 and NR1H2 expression was evaluated in liver samples. Non-human primates treated with 4 mg/kg of GalNAc-conjugated NR1H3 were assayed for expression at days 0, 28, 56, and 112 in the liver for knock-down (KD) of NR1H3 mRNA in (Table 9), and NR1H2 (Table 10). The results demonstrate that the constructs are specific to NR1H3 and do not have significant off target effects for NR1H2.









TABLE 9







NR1H3 mRNA remaining after treatment with the indicated


NR1H3-GalNAc in NHP









NR1H3 Gene Expression (% Time Matched PBS)



4 mg/kg













PBS
−1209
−1210
−1515
−1594












Day −6












Animal 1
65.8
136.6
204.3
103.8
NS


Animal 2
102.4
78.1
113.3
49.3
80.3


Animal 3
86.1
101.0
150.2
94.0
104.3


Animal 4
137.3
89.9
155.0
82.8
109.7


Animal 5
108.4
90.8
92.5
83.1
124.2


Average
100.0
99.3
143.1
82.6
104.6


SEM
11.9
10.0
19.2
9.2
9.1









Day 28












Animal 1
107.3
35.6
45.1
55.4
80.4


Animal 2
116.6
27.8
34.7
NS
103.6


Animal 3
122.1
44.5
35.7
74.1
45.9


Animal 4
77.4
50.5
27.5
45.1
73.2


Animal 5
76.6
37.4
45.2
34.9
68.5


Average
100.0
39.2
37.6
52.4
74.3


SEM
9.7
3.9
3.4
8.4
9.3









Day 56












Animal 1
96.7
29.0
39.0
30.0
78.2


Animal 2
115.0
29.7
32.1
NS
103.4


Animal 3
87.1
32.6
40.4
45.0
70.0


Animal 4
103.4
45.0
26.9
37.3
72.1


Animal 5
97.8
32.3
36.0
31.1
72.4


Average
100.0
33.7
34.9
35.9
79.2


SEM
4.6
2.9
2.5
3.4
6.2









Day 112












Animal 1
113.2
27.3
33.1
46.8
34.8


Animal 2
106.6
21.7
33.0
NS
31.2


Animal 3
100.2
22.1
29.6
45.7
44.2


Animal 4
103.1
45.0
33.1
44.9
32.1


Animal 5
77.0
34.4
32.1
37.6
33.6


Average
100.0
30.1
32.2
43.8
35.2


SEM
6.2
4.4
0.7
2.1
2.3





NS = no sample













TABLE 10







NR1H2 mRNA remaining after treatment with the indicated


NR1H3-GalNAc in NHP









NR1H2 Gene Expression (% Time Matched PBS)



4 mg/kg













PBS
−1209
−1210
−1515
−1594












Day −6












Animal 1
119.7
84
324.9
79.8
NS


Animal 2
96.3
107.5
116.1
89.3
175.9


Animal 3
105.7
86.2
106.6
103
151.1


Animal 4
82.1
105.7
672
127.9
113.2


Animal 5
96.3
134.9
126.7
101.6
113.9


Average
100.0
103.7
269.3
100.3
138.5


SEM
6.2
9.2
108.5
8.1
15.3









Day 28












Animal 1
101
80.2
122.2
102.7
117.5


Animal 2
123.3
80.9
103.7
NS
130


Animal 3
111.8
78.1
107.3
87.8
61.2


Animal 4
88.5
120.4
113.7
98.3
80.2


Animal 5
75.3
129.4
102.7
97.1
75.4


Average
100.0
97.8
109.9
96.5
92.9


SEM
8.4
11.2
3.6
3.1
13.1









Day 56












Animal 1
118.5
127.9
119.2
90.9
88.5


Animal 2
118.4
98.6
99.6
NS
112


Animal 3
90.9
91
131.8
76.3
103


Animal 4
88.5
115.4
117.8
100.7
121.1


Animal 5
83.8
107.6
87.1
85.5
119.4


Average
100.0
108.1
111.1
88.4
108.8


SEM
7.6
6.4
7.9
5.1
6.0









Day 112












Animal 1
105.6
114.2
107.9
95.6
89.6


Animal 2
108.5
81.5
106.8
NS
80.8


Animal 3
119.1
76.7
118.4
90.5
96.8


Animal 4
100.4
121.1
97.2
95.4
98.6


Animal 5
66.4
99.1
104.8
111.9
98.1


Average
100.0
98.5
107.0
98.4
92.8


SEM
8.9
8.7
3.4
4.7
3.4









Taken together, these results show that GalNAc-conjugated NR1H3 oligonucleotides designed to target human NR1H3 mRNA inhibit total NR1H3 expression in vivo (as determined by the reduction of the amount of NR1H3 mRNA).


Example 6

In order to determine the effect of hepatic NR1H3 knockdown on liver and plasma triglycerides and total plasma cholesterol, C57B1 mice fed a high fat, high fructose, high cholesterol (HFFC-NASH) diet were administrated a NR1H3 GalNac siRNA probe specifically designed to reduce NR1H3 expression in mice. The compound was administrated by subcutaneous injection 3 mg/kg once a week for 4 weeks. The respective vehicle treated groups (chow and HFFC-NASH diet) were treated with PBS.


As seen in Table 11, hepatocyte specific knockdown (KD) of murine NR1H3-specific GalNac siRNA led to a significant decrease in murine NR1H3 transcript expression in the liver of treated animals as compared to vehicle. Treatment leading to such hepatic NR1H3 mRNA reduction in turn induced reductions in liver triglycerides, plasma triglyceride and plasma total cholesterol. Furthermore, genes involved in hepatic de novo lipogenesis (fatty acid synthase (Fasn) and Acetyl-CoA carboxylase 2 (Acc2)) were decreased by treatment with the murine NR1H3-specific GalNac siRNA. In conclusion, hepatocyte-specific knockdown of NR1H3 mRNA in a mouse model for NAFLD led to significant improvement in NASH related dyslipidemia.













TABLE 11








NASH
p-value





diet/NR1H3
NASH/



CHOW diet
NASH
KD
NASH



AVG ± ST.
AVG ± ST.
AVG ± ST.
NR1H3



DEV.
DEV.
DEV.
KD



















Liver
9.39 ± 2.88
47.00 ± 12.56
19.39 ± 11.07
<0.0001


triglycerides






mg/g liver






Plasma
1.31 ± 0.31
0.86 ± 0.21
0.46 ± 0.11
0.0036


triglycerides






mM






Plasma total
2.06 ± 0.21
4.19 ± 0.54
3.37 ± 0.67
0.0145


cholesterol






mM






NR1H3
 100 ± 5.27
106.19 ± 8.75 
43.88 ± 6.27 
<0.0001


mRNA






expression






Fasn mRNA
  100 ± 44.53
56.60 ± 27.23
17.58 ± 6.06 
0.0327


expression






Acc2 mRNA
  100 ± 20.30
43.34 ± 21.89
12.21 ± 4.31 
0.0034


expression













Example 7: GalNAc-Conjugated siRNA Targeting NR1H3 for Knock Down in Obese Rhesus Monkeys Fed a High Cholesterol Diet

A GalNAc-conjugated NR1H3 oligonucleotide (sense strand SEQ ID NO: 964 antisense strand SEQ ID NO: 1052) was administered to obese rhesus monkeys fed a high cholesterol diet (0.06% cholesterol). Eight obese rhesus monkeys fed a high cholesterol diet (0.06% cholesterol) for more than 4 years, and with a body weight ranging from 8-25 kg, were dosed with 4 mg/kg lead at weeks 0, 4 and 8 and study was terminated at week 12. A liver biopsy (week −3) and an ultrasound scan of the liver (week −1) were performed prior to dosing of the animals. Liver enzymes and plasma lipids were determined prior to dosing and every 2 weeks posttreatment to assess potential adverse effects. At the end of the study, liver and plasma samples were collected to measure the effect of NR1H3a knock down on lipid and cholesterol metabolism, hepatic genes involved in these pathways, as well as liver histology.


At the end of the study NR1H3a mRNA in the liver was decreased 50%. mRNA is calculated as A/A Ct levels relative to 18s gene expression in each sample. As NR1H3a is expressed in other liver cells, e.g. the Kupffer cells, a full knockdown of NR1H3a was not expected from a liver homogenate.


The plasma levels of liver enzymes and plasma levels of lipids are presented in Table 12. During the treatment period, there was no change in the plasma level of alanine aminotransferase (ALT), gamma-glutamyltransferase (GGT) or total bilirubin (TB), while a small increase was observed in aspartate aminotransferase (AST) after 8 and 10 weeks of treatment. During the treatment period, there was no change in the plasma level total cholesterol (TC) or low-density lipoprotein cholesterol (LDL C), while a significant increase in high-density lipoprotein cholesterol (HDL C) was observed already after 2 weeks of treatment. After 12 weeks of treatment a significant decrease in plasma triglycerides (TG) was observed. In Table 12, data represent mean±standard error of the mean. Baseline is the average of measures from week −4 to week 0 (pre-dose). Statistics are done relative to baseline: One-Way ANOVA. P*<0.05 P**<0.01, P***<0.001.









TABLE 12







Liver enzymes and plasma lipids in response to NR1H3a KD in obese rhesus


monkeys.





















Plasma









Plasma
Total





AST
ALT
GGT
TBili
TG
Cholesterol
HDL-C
LDL-C



(IU/L)
(IU/L)
(IU/L)
(mg/dL)
(mg/dL)
(mg/dL)
(mg/dL)
(mg/dL)


















Baseline
31.9 ± 1.5  
55.6 ± 7.1
55.1 ± 4.2
0.21 ± 0.01 
 110 ± 19  
206 ± 21.9
80 ± 4.6 
107 ± 17.3


Week 2
32.9 ± 2.9  
58.4 ± 6.2
55.6 ± 5.2
0.17 ± 0.03 
84.9 ± 10.3 
209 ± 20  
98 ± 6.0**
 98 ± 14.5


Week 4
36.6 ± 4.1  
68.9 ± 9.3
58.0 ± 3.8
0.18 ± 0.02 
 103 ± 20.2 
210 ± 15  
107 ± 4.3***
101 ± 10.8


Week 6
38.5 ± 3.2  
66.3 ± 6.0
49.9 ± 3.2
0.23 ± 0.02 
74.1 ± 6.7 
208 ± 16  
102 ± 6.4** 
98 ± 9.8


Week 8
42.5 ± 2.5***
70.4 ± 9.0
54.1 ± 4.5
0.15 ± 0.02*
93.3 ± 18.0 
211 ± 14  
105 ± 6.2** 
104 ± 9.4 


Week 10
39.5 ± 2.8** 
58.5 ± 3.7
60.0 ± 3.3
0.17 ± 0.02 
91.6 ± 12.4 
219 ± 15  
107 ± 4.9** 
105 ± 10.4


Week 12
36.1 ± 2.1  
59.3 ± 7.0
62.8 ± 3.5
0.16 ± 0.02*
84.9 ± 17.2*
214 ± 14  
108 ± 4.3** 
116 ± 11.1









The effect of NR1H3a knock down on liver triglycerides and liver cholesterol is presented in Table 13. No significant change in liver triglycerides or cholesterol was observed. However, a tendency (p=0.055, paired t-test) towards a decrease in liver stiffness as measured by FibroScan™ was observed in response to hepatic NR1H3a knock down. In Table 13 data represent mean±standard error of the mean analyzed by a paired t-test. One monkey was excluded from the FibroScan™ analysis as it was not fully sedated during the second scan.









TABLE 13







TG and cholesterol levels and FibroScan ™ liver


stiffness in obese rhesus monkeys










Baseline
Week 13-14












Liver triglycerides (mg/dL)
40.9 ± 6.6
40.0 ± 5.5


Liver cholesterol (mg/dL)
42.6 ± 3.9
41.4 ± 3.0


Liver stiffness kPa
 5.7 ± 0.5
 4.3 ± 0.2









From the study, it can be concluded that knockdown of NR1H3a in hepatocytes does not cause hepatic cholesterol accumulation in obese monkeys fed a high cholesterol diet. An increased in plasma HDL C was observed 2 weeks after dosing, while a lowering of plasma TG was observed at week 12. No effect on liver TG was observed but none of the monkeys had steatosis at the start of the study. However, a tendency toward a decrease in liver stiffness was observed in response to hepatic NR1H3a knockdown.


List of Embodiments

Embodiment 1. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 2. The RNAi oligonucleotide of embodiment 1, wherein the sense strand is 15 to 50 nucleotides in length.


Embodiment 3. The RNAi oligonucleotide of embodiments 1 or 2, wherein the sense strand is 18 to 36 nucleotides in length.


Embodiment 4. The RNAi oligonucleotide of any one of embodiments 1 to 3, wherein the antisense strand is 15 to 30 nucleotides in length.


Embodiment 5. The RNAi oligonucleotide of any one of embodiments 1 to 4, wherein the antisense strand is 22 nucleotides in length and wherein antisense strand and the sense strand form a duplex region of at least 19 nucleotides in length, optionally at least 20 nucleotides in length.


Embodiment 6. The RNAi oligonucleotide of any one of embodiments 1 to 5, wherein the region of complementarity is at least 19 contiguous nucleotides in length, optionally at least 20 nucleotides in length.


Embodiment 7. The RNAi oligonucleotide of any one of embodiments 1 to 6, wherein the 3′ end of the sense strand comprises a stem-loop set forth as S1-L-S2, wherein S1 is complementary to S2, and wherein L forms a loop between S1 and S2 of 3-5 nucleotides in length.


Embodiment 8. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 15 to 50 nucleotides in length and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 9. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 15 to 50 nucleotides in length and an antisense strand of 15 to 30 nucleotides in length, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 10. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 15 to 50 nucleotides in length and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is 19 contiguous nucleotides in length, optionally 20 nucleotides in length.


Embodiment 11. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 18 to 36 nucleotides in length and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is 19 contiguous nucleotides in length, optionally 20 nucleotides in length.


Embodiment 12. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 18 to 36 nucleotides in length and an antisense strand of 22 nucleotides in length, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is 19 contiguous nucleotides in length, optionally 20 nucleotides in length.


Embodiment 13. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 18 to 36 nucleotides in length and an antisense strand of 22 nucleotides in length, wherein the sense strand and the antisense strand form a duplex region, wherein the 3′ end of the sense strand comprises a stem-loop set forth as S1-L-S2, wherein S1 is complementary to S2, and wherein L forms a loop between S1 and S2 of 3-5 nucleotides in length, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is 19 contiguous nucleotides in length, optionally 20 nucleotides in length.


Embodiment 14. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 36 nucleotides in length and an antisense strand of 22 nucleotides in length, wherein the sense strand and the antisense strand form a duplex region, wherein the 3′ end of the sense strand comprises a stem-loop set forth as S1-L-S2, wherein S1 is complementary to S2, and wherein L forms a loop between S1 and S2 of 3-5 nucleotides in length, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is 19 contiguous nucleotides in length, optionally 20 nucleotides in length.


Embodiment 15. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand of 36 nucleotides in length and an antisense strand of 22 nucleotides in length, wherein the sense strand and the antisense strand form a duplex region of at least 19 nucleotides in length, optionally 20 nucleotides in length, wherein the 3′ end of the sense strand comprises a stem-loop set forth as S1-L-S2, wherein S1 is complementary to S2, and wherein L forms a loop between S1 and S2 of 3-5 nucleotides in length, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is 19 contiguous nucleotides in length, optionally 20 nucleotides in length.


Embodiment 16. The RNAi oligonucleotide of any one of embodiments 7 and 13-15, wherein L is a triloop or a tetraloop.


Embodiment 17. The RNAi oligonucleotide of embodiment 16, wherein L is a tetraloop.


Embodiment 18. The RNAi oligonucleotide of embodiment 17, wherein the tetraloop comprises the sequence 5′-GAAA-3′.


Embodiment 19. The RNAi oligonucleotide of any one of embodiments 16-18, wherein the S1 and S2 are 1-10 nucleotides in length and have the same length.


Embodiment 20. The RNAi oligonucleotide of embodiment 19, wherein S1 and S2 are 1 nucleotide, 2 nucleotides, 3 nucleotides, 4 nucleotides, 5 nucleotides, 6 nucleotides, 7 nucleotides, 8 nucleotides, 9 nucleotides, or 10 nucleotides in length.


Embodiment 21. The RNAi oligonucleotide of embodiment 20, wherein S1 and S2 are 6 nucleotides in length.


Embodiment 22. The RNAi oligonucleotide of any one of embodiments 16 to 21, wherein the stem-loop comprises the sequence 5′-GCAGCCGAAAGGCUGC-3′ (SEQ ID NO: 1121).


Embodiment 23. The RNAi oligonucleotide of any one of embodiments 1 to 22, wherein the antisense strand comprises a 3′-overhang sequence of one or more nucleotides in length.


Embodiment 24. The RNAi oligonucleotide of embodiment 23, wherein the 3′-overhang sequence is 2 nucleotides in length, optionally wherein the 3′-overhang sequence is GG.


Embodiment 25. The RNAi oligonucleotide of any one of the preceding embodiments, wherein the oligonucleotide comprises at least one modified nucleotide.


Embodiment 26. The RNAi oligonucleotide of embodiment 25, wherein the modified nucleotide comprises a 2′-modification.


Embodiment 27. The RNAi oligonucleotide of embodiment 26, wherein the 2′-modification is a modification selected from 2′-aminoethyl, 2′-fluoro, 2′-O-methyl, 2′-O-methoxyethyl, and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid.


Embodiment 28. The RNAi oligonucleotide of any one of embodiments 25 to 27, wherein all nucleotides comprising the oligonucleotide are modified, optionally wherein the modification is a 2′-modification selected from 2′-fluoro and 2′-O-methyl.


Embodiment 29. The RNAi oligonucleotide of any one of embodiments 25-28, wherein about 10-15%, 10%, 11%, 12%, 13%, 14%, or 15% of the nucleotides of the sense strand comprise a 2′-fluoro modification.


Embodiment 30. The RNAi oligonucleotide of any one of embodiments 25-29, wherein about 25-35%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, or 35% of the nucleotides of the antisense strand comprise a 2′-fluoro modification.


Embodiment 31. The RNAi oligonucleotide of any one of embodiments 25-30, wherein about 25-35%, 25%, 26%, 27%, 28%, 29%, 30%, 31%, 32%, 33%, 34%, or 35% of the nucleotides of the oligonucleotide comprise a 2′-fluoro modification


Embodiment 32. The RNAi oligonucleotide of any one of embodiments 25-31, wherein the sense strand comprises 36 nucleotides with positions 1-36 from 5′ to 3′, wherein positions 8-11 comprise a 2′-fluoro modification.


Embodiment 33. The RNAi oligonucleotide of any one of embodiments 25-32, wherein the antisense strand comprises 22 nucleotides with positions 1-22 from 5′ to 3′, and wherein positions 2, 3, 4, 5, 7, 10, and 14 comprise a 2′-fluoro modification.


Embodiment 34. The RNAi oligonucleotide of any one of embodiments 25-33, wherein the remaining nucleotides comprise a 2′-O-methyl modification.


Embodiment 35. The RNAi oligonucleotide of any one of the preceding embodiments, wherein the oligonucleotide comprises at least one modified internucleotide linkage.


Embodiment 36. The RNAi oligonucleotide of embodiment 35, wherein the at least one modified internucleotide linkage is a phosphorothioate linkage.


Embodiment 37. The RNAi oligonucleotide of any one of the preceding embodiments, wherein the 4′-carbon of the sugar of the 5′-nucleotide of the antisense strand comprises a phosphate analog.


Embodiment 38. The RNAi oligonucleotide of embodiment 37, wherein the phosphate analog is oxymethylphosphonate, vinylphosphonate or malonylphosphonate, optionally wherein the phosphate analog is a 4′-phosphate analog comprising 5′-methoxyphosphonate-4′-oxy.


Embodiment 39. The RNAi oligonucleotide of any one of the preceding embodiments, wherein at least one nucleotide of the oligonucleotide is conjugated to one or more targeting ligands.


Embodiment 40. The RNAi oligonucleotide of embodiment 39, wherein each targeting ligand comprises a carbohydrate, amino sugar, cholesterol, polypeptide or lipid.


Embodiment 41. The RNAi oligonucleotide of embodiment 39, wherein each targeting ligand comprises a N-acetylgalactosamine (GalNAc) moiety.


Embodiment 42. The RNAi oligonucleotide of embodiment 35, wherein the GalNAc moiety is a monovalent GalNAc moiety, a bivalent GalNAc moiety, a trivalent GalNAc moiety or a tetravalent GalNAc moiety.


Embodiment 43. The RNAi oligonucleotide of any one of embodiments 16 to 38, wherein up to 4 nucleotides of L of the stem-loop are each conjugated to a monovalent GalNAc moiety.


Embodiment 44. The RNAi oligonucleotide of any one of embodiments 1 to 43, wherein the sense strand comprises a nucleotide sequence of any one of SEQ ID NOs: 769-856 or 1519-1552.


Embodiment 45. The RNAi oligonucleotide of any one of embodiments 1 to 44, wherein the antisense strand comprises a nucleotide sequence of any one of SEQ ID NOs: 857-944.


Embodiment 46. The RNAi oligonucleotide of any one of embodiments 1 to 45, wherein the sense strand and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively.


Embodiment 47. The RNAi oligonucleotide of any one of embodiments 1 to 46, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 786, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 874.


Embodiment 48. The RNAi oligonucleotide of any one of embodiments 1 to 46, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 787, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 875.


Embodiment 49. The RNAi oligonucleotide of any one of embodiments 1 to 46, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1537, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 929.


Embodiment 50. The RNAi oligonucleotide of any one of embodiments 1 to 46, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 813, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 901.


Embodiment 51. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein all nucleotides comprising the sense strand and antisense strand are modified, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 52. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein all nucleotides comprising the sense strand and antisense strand are modified, wherein the 4′-carbon of the sugar of the 5′-nucleotide of the antisense strand comprises a phosphate analog, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 53. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein all nucleotides comprising the sense strand and antisense strand are modified, wherein the 4′-carbon of the sugar of the 5′-nucleotide of the antisense strand comprises a phosphate analog, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 54. An RNAi oligonucleotide for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein all nucleotides comprising the sense strand and the antisense strand are modified, wherein the antisense strand and the sense strand comprise one or more 2′-fluoro and 2′-O-methyl modified nucleotides and at least one phosphorothioate linkage, wherein the 4′-carbon of the sugar of the 5′-nucleotide of the antisense strand comprises a phosphate analog, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 55. The RNAi oligonucleotide of any one of embodiments 1-54, wherein the sense strand comprises a nucleotide sequence of any one of SEQ ID NOs: 945-1032.


Embodiment 56. The RNAi oligonucleotide of any one of embodiments 1-55, wherein the antisense strand comprises a nucleotide sequence of any one of SEQ ID NOs: 1033-1120.


Embodiment 57. The RNAi oligonucleotide of any one of embodiments 1-56, wherein the sense and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 945 and 1033, respectively;


(b) SEQ ID NOs: 946 and 1034, respectively;


(c) SEQ ID NOs: 947 and 1035, respectively;


(d) SEQ ID NOs: 948 and 1036, respectively;


(e) SEQ ID NOs: 949 and 1037, respectively;


(f) SEQ ID NOs: 950 and 1038, respectively;


(g) SEQ ID NOs: 951 and 1039, respectively;


(h) SEQ ID NOs: 952 and 1040, respectively;


(i) SEQ ID NOs: 953 and 1041, respectively;


(j) SEQ ID NOs: 954 and 1042, respectively;


(k) SEQ ID NOs: 955 and 1043, respectively;


(l) SEQ ID NOs: 956 and 1044 respectively;


(m) SEQ ID NOs: 957 and 1045, respectively;


(n) SEQ ID NOs: 958 and 1046, respectively;


(o) SEQ ID NOs: 959 and 1047, respectively;


(p) SEQ ID NOs: 960 and 1048, respectively;


(q) SEQ ID NOs: 961 and 1049, respectively;


(r) SEQ ID NOs: 962 and 1050, respectively;


(s) SEQ ID NOs: 963 and 1051, respectively;


(t) SEQ ID NOs: 964 and 1052, respectively;


(u) SEQ ID NOs: 965 and 1053, respectively;


(v) SEQ ID NOs: 966 and 1054, respectively;


(w) SEQ ID NOs: 967 and 1055, respectively;


(x) SEQ ID NOs: 968 and 1056, respectively;


(y) SEQ ID NOs: 969 and 1057, respectively;


(z) SEQ ID NOs: 970 and 1058, respectively;


(aa) SEQ ID NOs: 971 and 1059, respectively;


(bb) SEQ ID NOs: 972 and 1060, respectively;


(cc) SEQ ID NOs: 973 and 1061, respectively;


(dd) SEQ ID NOs: 974 and 1062, respectively;


(ee) SEQ ID NOs: 975 and 1063, respectively;


(ff) SEQ ID NOs: 976 and 1064, respectively;


(gg) SEQ ID NOs: 977 and 1065, respectively;


(hh) SEQ ID NOs: 978 and 1066, respectively;


(ii) SEQ ID NOs: 979 and 1067, respectively;


(jj) SEQ ID NOs: 980 and 1068, respectively;


(kk) SEQ ID NOs: 981 and 1069, respectively;


(ll) SEQ ID NOs: 982 and 1070, respectively;


(mm) SEQ ID NOs: 983 and 1071, respectively;


(nn) SEQ ID NOs: 984 and 1072, respectively;


(oo) SEQ ID NOs: 985 and 1073, respectively;


(pp) SEQ ID NOs: 986 and 1074, respectively;


(qq) SEQ ID NOs: 987 and 1075, respectively;


(rr) SEQ ID NOs: 988 and 1076, respectively;


(ss) SEQ ID NOs: 989 and 1077, respectively;


(tt) SEQ ID NOs: 990 and 1078, respectively;


(uu) SEQ ID NOs: 991 and 1079, respectively;


(vv) SEQ ID NOs: 992 and 1080, respectively;


(ww) SEQ ID NOs: 993 and 1081, respectively;


(xx) SEQ ID NOs: 994 and 1082, respectively;


(yy) SEQ ID NOs: 995 and 1083, respectively;


(zz) SEQ ID NOs: 996 and 1084, respectively;


(aaa) SEQ ID NOs: 997 and 1085, respectively;


(bbb) SEQ ID NOs: 998 and 1086, respectively;


(ccc) SEQ ID NOs: 999 and 1087, respectively;


(ddd) SEQ ID NOs: 1000 and 1088, respectively;


(eee) SEQ ID NOs: 1001 and 1089, respectively;


(fff) SEQ ID NOs: 1002 and 1090, respectively;


(ggg) SEQ ID NOs: 1003 and 1091, respectively;


(hhh) SEQ ID NOs: 1004 and 1092 respectively;


(iii) SEQ ID NOs: 1005 and 1093 respectively;


(jjj) SEQ ID NOs: 1006 and 1094, respectively;


(kkk) SEQ ID NOs: 1007 and 1095, respectively;


(lll) SEQ ID NOs: 1008 and 1096, respectively;


(mmm) SEQ ID NOs: 1009 and 1097, respectively;


(nnn) SEQ ID NOs: 1010 and 1098, respectively;


(ooo) SEQ ID NOs: 1011 and 1099, respectively;


(ppp) SEQ ID NOs: 1012 and 1100, respectively;


(qqq) SEQ ID NOs: 1013 and 1101, respectively;


(rrr) SEQ ID NOs: 1014 and 1102 respectively;


(sss) SEQ ID NOs: 1015 and 1103, respectively;


(ttt) SEQ ID NOs: 1016 and 1104, respectively;


(uuu) SEQ ID NOs: 1017 and 1105, respectively;


(vvv) SEQ ID NOs: 1018 and 1106, respectively;


(www) SEQ ID NOs: 1019 and 1107, respectively;


(xxx) SEQ ID NOs: 1020 and 1108, respectively;


(yyy) SEQ ID NOs: 1021 and 1109, respectively;


(zzz) SEQ ID NOs: 1022 and 1110, respectively;


(aaaa) SEQ ID NOs: 1023 and 1111, respectively;


(bbbb) SEQ ID NOs: 1024 and 1112, respectively;


(cccc) SEQ ID NOs: 1025 and 1113, respectively;


(dddd) SEQ ID NOs: 1026 and 1114, respectively;


(eeee) SEQ ID NOs: 1027 and 1115, respectively;


(ffff) SEQ ID NOs: 1028 and 1116, respectively;


(gggg) SEQ ID NOs: 1029 and 1117, respectively;


(hhhh) SEQ ID NOs: 1030 and 1118, respectively;


(iiii) SEQ ID NOs: 1031 and 1119, respectively; and,


(jjjj) SEQ ID NOs: 1032 and 1120, respectively.


Embodiment 58. The RNAi oligonucleotide of any one of embodiments 1-57, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 963 and 1051, respectively.


Embodiment 59. The RNAi oligonucleotide of any one of embodiments 1-57, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 964 and 1052, respectively.


Embodiment 60. The RNAi oligonucleotide of any one of embodiments 1-57, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 1006 and 1094, respectively.


Embodiment 61. The RNAi oligonucleotide of any one of embodiments 1-57, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 1018 and 1106, respectively.


Embodiment 62. An RNAi oligonucleotide for inhibiting expression of NR1H3, wherein said dsRNA comprises a sense strand and an antisense strand, the antisense strand comprising a region of complementarity to a NR1H3 RNA transcript, wherein the sense strand comprises the sequence and all of the modifications of 5′-mCs-mU-mC-mA-mA-mG-mG-fA-fU-fU-fU-mC-mA-mG-mU-mU-mA-mU-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 963), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-40-mUs]-fUs-fAs-fU-fA-mA-fC-mU-mG-fA-mA-mA-mU-fC-mC-mU-mU-mG-mA-mGs-mGs-mG-3′ (SEQ ID NO: 1051), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=




embedded image


Embodiment 63. An RNAi oligonucleotide for inhibiting expression of NR1H3, wherein said dsRNA comprises a sense strand and an antisense strand, the antisense strand comprising a region of complementarity to a NR1H3 RNA transcript, wherein the sense strand comprises the sequence and all of the modifications of 5′-mUs-mC-mA-mA-mG-mG-mA-fU-fU-fU-fC-mA-mG-mU-mU-mA-mU-mA-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 964) and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-40-mUs]-fUs-fUs-fA-fU-mA-fA-mC-mU-fG-mA-mA-mA-fU-mC-mC-mU-mU-mG-mAs-mGs-mG-3′ (SEQ ID NO: 1052), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=




embedded image


Embodiment 64. An RNAi oligonucleotide for inhibiting expression of NR1H3, wherein said dsRNA comprises a sense strand and an antisense strand, the antisense strand comprising a region of complementarity to a NR1H3 RNA transcript, wherein the sense strand comprises the sequence and all of the modifications of 5′-mAs-mG-mC-mA-mG-mC-mG-fU-fC-fC-fA-mC-mU-mC-mA-mG-mA-mG-mC-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 1006), and wherein the antisense strand comprises the sequence and all of the modifications of 5′[MePhosphonate-40-mUs]-fGs-fCs-fU-fC-mU-fG-mA-mG-fU-mG-mG-mA-fC-mG-mC-mU-mG-mC-mUs-mGs-mG-3′ (SEQ ID NO: 1094), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=




embedded image


Embodiment 65. A double stranded RNAi oligonucleotide (dsRNAi) for inhibiting expression of NR1H3, wherein said dsRNA comprises a sense strand and an antisense strand, the antisense strand comprising a region of complementarity to a NR1H3 RNA transcript, wherein the sense strand comprises the sequence and all of the modifications of 5′-mAs-mU-mG-mU-mG-mC-mA-fC-fG-fA-fA-mU-mG-mA-mC-mU-mG-mU-mU-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 1018), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fAs-fAs-fC-fA-mG-fU-mC-mA-fU-mU-mC-mG-fU-mG-mC-mA-mC-mA-mUs-mGs-mG-3′ (SEQ ID NO: 1106), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=




embedded image


Embodiment 66. A method for treating a subject having a disease, disorder or condition associated with NR1H3 expression, the method comprising administering to the subject a therapeutically effective amount of the RNAi oligonucleotide of any one of the preceding embodiments, or pharmaceutical composition thereof, thereby treating the subject.


Embodiment 67. A pharmaceutical composition comprising the RNAi oligonucleotide of any one of embodiments 1 to 65, and a pharmaceutically acceptable carrier, delivery agent or excipient.


Embodiment 68. A method of delivering an oligonucleotide to a subject, the method comprising administering pharmaceutical composition of embodiment 67 to the subject.


Embodiment 69. A method for reducing NR1H3 expression in a cell, a population of cells or a subject, the method comprising the step of:

    • i. contacting the cell or the population of cells with the RNAi oligonucleotide of any one of embodiments 1 to 65, or the pharmaceutical composition of embodiment 67; or
    • ii. administering to the subject the RNAi oligonucleotide of any one of embodiments 1 to 65, or the pharmaceutical composition of embodiment 67.


Embodiment 70. The method of embodiment 69, wherein reducing NR1H3 expression comprises reducing an amount or level of NR1H3 mRNA, an amount or level of NR1H3 protein, or both.


Embodiment 71. The method of embodiment 69 or 70, wherein the subject has a disease, disorder or condition associated with NR1H3 expression.


Embodiment 72. The method of embodiment 66 or 71, wherein the disease, disorder or condition associated with NR1H3 expression is non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus.


Embodiment 73. The method of any one of embodiments 66 and 69 to 72, wherein the RNAi oligonucleotide, or pharmaceutical composition, is administered in combination with a second composition or therapeutic agent.


Embodiment 74. A method for treating a subject having a disease, disorder or condition associated with NR1H3 expression, the method comprising administering to the subject a therapeutically effective amount of an RNAi oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein the antisense strand comprises a region of complementarity to a NR1H3 mRNA target sequence of any one of SEQ ID NOs: 1-384, and wherein the region of complementarity is at least 15 contiguous nucleotides in length.


Embodiment 75. A method for treating a subject having a disease, disorder or condition associated with NR1H3 expression, the method comprising administering to the subject a therapeutically effective amount of an RNAi oligonucleotide comprising a sense strand and an antisense strand selected from a row set forth in Table 4 or Table 5, or pharmaceutical composition thereof, thereby treating the subject.


Embodiment 76. A method for treating a subject having a disease, disorder or condition associated with NR1H3 expression, the method comprising administering to the subject a therapeutically effective amount of an RNAi oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 769 and 857, respectively;


(b) SEQ ID NOs: 770 and 858, respectively;


(c) SEQ ID NOs: 771 and 859, respectively;


(d) SEQ ID NOs: 772 and 860, respectively;


(e) SEQ ID NOs: 773 and 861, respectively;


(f) SEQ ID NOs: 774 and 862, respectively;


(g) SEQ ID NOs: 775 and 863, respectively;


(h) SEQ ID NOs: 776 and 864, respectively;


(i) SEQ ID NOs: 777 and 865, respectively;


(j) SEQ ID NOs: 778 and 866, respectively;


(k) SEQ ID NOs: 779 and 867, respectively;


(l) SEQ ID NOs: 780 and 868, respectively;


(m) SEQ ID NOs: 781 and 869, respectively;


(n) SEQ ID NOs: 782 and 870, respectively;


(o) SEQ ID NOs: 783 and 871, respectively;


(p) SEQ ID NOs: 784 and 872, respectively;


(q) SEQ ID NOs: 785 and 873, respectively;


(r) SEQ ID NOs: 786 and 874, respectively;


(s) SEQ ID NOs: 787 and 875, respectively;


(t) SEQ ID NOs: 788 and 876, respectively;


(u) SEQ ID NOs: 789 and 877, respectively;


(v) SEQ ID NOs: 790 and 878, respectively;


(w) SEQ ID NOs: 791 and 879, respectively;


(x) SEQ ID NOs: 792 and 880, respectively;


(y) SEQ ID NOs: 793 and 881, respectively;


(z) SEQ ID NOs: 794 and 882, respectively;


(aa) SEQ ID NOs: 795 and 883, respectively;


(bb) SEQ ID NOs: 796 and 884, respectively;


(cc) SEQ ID NOs: 797 and 885, respectively;


(dd) SEQ ID NOs: 798 and 886, respectively;


(ee) SEQ ID NOs: 799 and 887, respectively;


(ff) SEQ ID NOs: 800 and 888, respectively;


(gg) SEQ ID NOs: 801 and 889, respectively;


(hh) SEQ ID NOs: 802 and 890, respectively;


(ii) SEQ ID NOs: 803 and 891, respectively;


(jj) SEQ ID NOs: 804 and 892, respectively;


(kk) SEQ ID NOs: 805 and 893, respectively;


(ll) SEQ ID NOs: 806 and 894, respectively;


(mm) SEQ ID NOs: 807 and 895, respectively;


(nn) SEQ ID NOs: 808 and 896, respectively;


(oo) SEQ ID NOs: 809 and 897, respectively;


(pp) SEQ ID NOs: 810 and 898, respectively;


(qq) SEQ ID NOs: 811 and 899, respectively;


(rr) SEQ ID NOs: 812 and 900, respectively;


(ss) SEQ ID NOs: 813 and 901, respectively;


(tt) SEQ ID NOs: 814 and 902, respectively;


(uu) SEQ ID NOs: 815 and 903, respectively;


(vv) SEQ ID NOs: 816 and 904, respectively;


(ww) SEQ ID NOs: 817 and 905, respectively;


(xx) SEQ ID NOs: 818 and 906, respectively;


(yy) SEQ ID NOs: 819 and 907, respectively;


(zz) SEQ ID NOs: 820 and 908, respectively;


(aaa) SEQ ID NOs: 821 and 909, respectively;


(bbb) SEQ ID NOs: 822 and 910, respectively;


(ccc) SEQ ID NOs: 823 and 911, respectively;


(ddd) SEQ ID NOs: 824 and 912, respectively;


(eee) SEQ ID NOs: 825 and 913, respectively;


(fff) SEQ ID NOs: 826 and 914, respectively;


(ggg) SEQ ID NOs: 827 and 915, respectively;


(hhh) SEQ ID NOs: 828 and 916, respectively;


(iii) SEQ ID NOs: 829 and 917, respectively;


(jjj) SEQ ID NOs: 830 and 918, respectively;


(kkk) SEQ ID NOs: 831 and 919, respectively;


(lll) SEQ ID NOs: 832 and 920, respectively;


(mmm) SEQ ID NOs: 833 and 921, respectively;


(nnn) SEQ ID NOs: 834 and 922, respectively;


(ooo) SEQ ID NOs: 835 and 923, respectively;


(ppp) SEQ ID NOs: 836 and 924, respectively;


(qqq) SEQ ID NOs: 837 and 925, respectively;


(rrr) SEQ ID NOs: 838 and 926, respectively;


(sss) SEQ ID NOs: 839 and 927, respectively;


(ttt) SEQ ID NOs: 840 and 928, respectively;


(uuu) SEQ ID NOs: 1537 and 929, respectively;


(vvv) SEQ ID NOs: 842 and 930, respectively;


(www) SEQ ID NOs: 843 and 931, respectively;


(xxx) SEQ ID NOs: 844 and 932, respectively;


(yyy) SEQ ID NOs: 845 and 933, respectively;


(zzz) SEQ ID NOs: 846 and 934, respectively;


(aaaa) SEQ ID NOs: 847 and 935, respectively;


(bbbb) SEQ ID NOs: 848 and 936, respectively;


(cccc) SEQ ID NOs: 849 and 937, respectively;


(dddd) SEQ ID NOs: 850 and 938, respectively;


(eeee) SEQ ID NOs: 851 and 939, respectively;


(ffff) SEQ ID NOs: 852 and 940, respectively;


(gggg) SEQ ID NOs: 853 and 941, respectively;


(hhhh) SEQ ID NOs: 854 and 942, respectively;


(iiii) SEQ ID NOs: 855 and 943, respectively; and,


(jjjj) SEQ ID NOs: 856 and 944, respectively.


Embodiment 77. The method of embodiment 76, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 786, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 874.


Embodiment 78. The method of embodiment 76, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 787, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 875.


Embodiment 79. The method of embodiment 76, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1537, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 929.


Embodiment 80. The method of embodiment 76, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 813, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 901.


Embodiment 81. A method for treating a subject having a disease, disorder or condition associated with NR1H3 expression, the method comprising administering to the subject a therapeutically effective amount of an RNAi oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and antisense strands comprise nucleotide sequences selected from the group consisting of:


(a) SEQ ID NOs: 945 and 1033, respectively;


(b) SEQ ID NOs: 946 and 1034, respectively;


(c) SEQ ID NOs: 947 and 1035, respectively;


(d) SEQ ID NOs: 948 and 1036, respectively;


(e) SEQ ID NOs: 949 and 1037, respectively;


(f) SEQ ID NOs: 950 and 1038, respectively;


(g) SEQ ID NOs: 951 and 1039, respectively;


(h) SEQ ID NOs: 952 and 1040, respectively;


(i) SEQ ID NOs: 953 and 1041, respectively;


(j) SEQ ID NOs: 954 and 1042, respectively;


(k) SEQ ID NOs: 955 and 1043, respectively;


(l) SEQ ID NOs: 956 and 1044 respectively;


(m) SEQ ID NOs: 957 and 1045, respectively;


(n) SEQ ID NOs: 958 and 1046, respectively;


(o) SEQ ID NOs: 959 and 1047, respectively;


(p) SEQ ID NOs: 960 and 1048, respectively;


(q) SEQ ID NOs: 961 and 1049, respectively;


(r) SEQ ID NOs: 962 and 1050, respectively;


(s) SEQ ID NOs: 963 and 1051, respectively;


(t) SEQ ID NOs: 964 and 1052, respectively;


(u) SEQ ID NOs: 965 and 1053, respectively;


(v) SEQ ID NOs: 966 and 1054, respectively;


(w) SEQ ID NOs: 967 and 1055, respectively;


(x) SEQ ID NOs: 968 and 1056, respectively;


(y) SEQ ID NOs: 969 and 1057, respectively;


(z) SEQ ID NOs: 970 and 1058, respectively;


(aa) SEQ ID NOs: 971 and 1059, respectively;


(bb) SEQ ID NOs: 972 and 1060, respectively;


(cc) SEQ ID NOs: 973 and 1061, respectively;


(dd) SEQ ID NOs: 974 and 1062, respectively;


(ee) SEQ ID NOs: 975 and 1063, respectively;


(ff) SEQ ID NOs: 976 and 1064, respectively;


(gg) SEQ ID NOs: 977 and 1065, respectively;


(hh) SEQ ID NOs: 978 and 1066, respectively;


(ii) SEQ ID NOs: 979 and 1067, respectively;


(jj) SEQ ID NOs: 980 and 1068, respectively;


(kk) SEQ ID NOs: 981 and 1069, respectively;


(ll) SEQ ID NOs: 982 and 1070, respectively;


(mm) SEQ ID NOs: 983 and 1071, respectively;


(nn) SEQ ID NOs: 984 and 1072, respectively;


(oo) SEQ ID NOs: 985 and 1073, respectively;


(pp) SEQ ID NOs: 986 and 1074, respectively;


(qq) SEQ ID NOs: 987 and 1075, respectively;


(rr) SEQ ID NOs: 988 and 1076, respectively;


(ss) SEQ ID NOs: 989 and 1077, respectively;


(tt) SEQ ID NOs: 990 and 1078, respectively;


(uu) SEQ ID NOs: 991 and 1079, respectively;


(vv) SEQ ID NOs: 992 and 1080, respectively;


(ww) SEQ ID NOs: 993 and 1081, respectively;


(xx) SEQ ID NOs: 994 and 1082, respectively;


(yy) SEQ ID NOs: 995 and 1083, respectively;


(zz) SEQ ID NOs: 996 and 1084, respectively;


(aaa) SEQ ID NOs: 997 and 1085, respectively;


(bbb) SEQ ID NOs: 998 and 1086, respectively;


(ccc) SEQ ID NOs: 999 and 1087, respectively;


(ddd) SEQ ID NOs: 1000 and 1088, respectively;


(eee) SEQ ID NOs: 1001 and 1089, respectively;


(fff) SEQ ID NOs: 1002 and 1090, respectively;


(ggg) SEQ ID NOs: 1003 and 1091, respectively;


(hhh) SEQ ID NOs: 1004 and 1092 respectively;


(iii) SEQ ID NOs: 1005 and 1093 respectively;


(jjj) SEQ ID NOs: 1006 and 1094, respectively;


(kkk) SEQ ID NOs: 1007 and 1095, respectively;


(lll) SEQ ID NOs: 1008 and 1096, respectively;


(mmm) SEQ ID NOs: 1009 and 1097, respectively;


(nnn) SEQ ID NOs: 1010 and 1098, respectively;


(ooo) SEQ ID NOs: 1011 and 1099, respectively;


(ppp) SEQ ID NOs: 1012 and 1100, respectively;


(qqq) SEQ ID NOs: 1013 and 1101, respectively;


(rrr) SEQ ID NOs: 1014 and 1102 respectively;


(sss) SEQ ID NOs: 1015 and 1103, respectively;


(ttt) SEQ ID NOs: 1016 and 1104, respectively;


(uuu) SEQ ID NOs: 1017 and 1105, respectively;


(vvv) SEQ ID NOs: 1018 and 1106, respectively;


(www) SEQ ID NOs: 1019 and 1107, respectively;


(xxx) SEQ ID NOs: 1020 and 1108, respectively;


(yyy) SEQ ID NOs: 1021 and 1109, respectively;


(zzz) SEQ ID NOs: 1022 and 1110, respectively;


(aaaa) SEQ ID NOs: 1023 and 1111, respectively;


(bbbb) SEQ ID NOs: 1024 and 1112, respectively;


(cccc) SEQ ID NOs: 1025 and 1113, respectively;


(dddd) SEQ ID NOs: 1026 and 1114, respectively;


(eeee) SEQ ID NOs: 1027 and 1115, respectively;


(ffff) SEQ ID NOs: 1028 and 1116, respectively;


(gggg) SEQ ID NOs: 1029 and 1117, respectively;


(hhhh) SEQ ID NOs: 1030 and 1118, respectively;


(iiii) SEQ ID NOs: 1031 and 1119, respectively, and;


(jjjj) SEQ ID NOs: 1032 and 1120, respectively.


Embodiment 82. The method of embodiment 81, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 963, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1051.


Embodiment 83. The method of embodiment 81, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 964, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1052.


Embodiment 84. The method of embodiment 81, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1006, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1094.


Embodiment 85. The method of embodiment 81, wherein the sense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1018, wherein the antisense strand comprises a nucleotide sequence as set forth in SEQ ID NO: 1106.


Embodiment 86. The method of any one of embodiments 74 to 85, wherein the disease, disorder or condition associated with NR1H3 expression is non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus.


Embodiment 87. Use of the RNAi oligonucleotide of any one of embodiments 1 to 65, or the pharmaceutical composition of embodiment 67, in the manufacture of a medicament for the treatment of a disease, disorder or condition associated with NR1H3 expression, optionally for the treatment of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus.


Embodiment 88. The RNAi oligonucleotide of any one of embodiments 1 to 65, or the pharmaceutical composition of embodiment 67, for use, or adaptable for use, in the treatment of a disease, disorder or condition associated with NR1H3 expression, optionally for the treatment of non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus.


Embodiment 89. A kit comprising the RNAi oligonucleotide of any one of embodiments 1 to 65, an optional pharmaceutically acceptable carrier, and a package insert comprising instructions for administration to a subject having a disease, disorder or condition associated with NR1H3 expression.


Embodiment 90. The use of embodiment 87, the RNAi oligonucleotide or pharmaceutical composition for use, or adaptable for use, of embodiment 88, or the kit of embodiment 89, wherein the disease, disorder or condition associated with NR1H3 expression is non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus.


Embodiment 91. A double stranded RNAi oligonucleotide (dsRNAi) for reducing NR1H3 expression, the oligonucleotide comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein

    • (i) the sense strand comprises a nucleotide sequence comprising at least 15, 17, or 19 contiguous nucleotides, with 0, 1, 2, or 3 mismatches, of a portion of a nucleotide sequence of any one of SEQ ID NOs: 1-384, SEQ ID NOs: 1125-1511, SEQ ID NOs: 769-856, SEQ ID NOs: 1519-1552 or SEQ ID NOs: 945-1032; and
    • (ii) the antisense strand comprises a nucleotide sequence comprising at least 15, 17, or 19 contiguous nucleotides, with 0, 1, 2, or 3 mismatches, of a portion of a nucleotide sequence of any one of SEQ ID NOs: 385-768, SEQ ID NOs 857-944, SEQ ID NOs 1512-1515, or SEQ ID NOs: 1033-1120.


SEQUENCE LISTING

The instant application contains a Sequence Listing which has been submitted electronically in ASCII format and is hereby incorporated by reference in its entirety.




















SEQ


Name
Species
Description
Sequence
ID NO



















NR1H3-764-
Artificial
25 mer sense
UGUCCUGUCAGAAGAACAGAUCC
1


784-861
Sequence
strand
GC






NR1H3-766-
Artificial
25 mer sense
UCCUGUCAGAAGAACAGAUACGC
2


786-863
Sequence
strand
CU






NR1H3-789-
Artificial
25 mer sense
CUGAAGAAACUGAAGCGGCAAG
3


809-886
Sequence
strand
AGG






NR1H3-790-
Artificial
25 mer sense
UGAAGAAACUGAAGCGGCAAGA
4


810-887
Sequence
strand
GGA






NR1H3-791-
Artificial
25 mer sense
GAAGAAACUGAAGCGGCAAAAG
5


811-888
Sequence
strand
GAG






NR1H3-792-
Artificial
25 mer sense
AAGAAACUGAAGCGGCAAGAGG
6


812-889
Sequence
strand
AGG






NR1H3-793-
Artificial
25 mer sense
AGAAACUGAAGCGGCAAGAAGA
7


813-890
Sequence
strand
GGA






NR1H3-795-
Artificial
25 mer sense
AAACUGAAGCGGCAAGAGGAGG
8


815-892
Sequence
strand
AAC






NR1H3-796-
Artificial
25 mer sense
AACUGAAGCGGCAAGAGGAAGA
9


816-893
Sequence
strand
ACA






NR1H3-797-
Artificial
25 mer sense
ACUGAAGCGGCAAGAGGAGAAA
10


817-894
Sequence
strand
CAG






NR1H3-798-
Artificial
25 mer sense
CUGAAGCGGCAAGAGGAGGAAC
11


818-895
Sequence
strand
AGG






NR1H3-799-
Artificial
25 mer sense
UGAAGCGGCAAGAGGAGGAACA
12


819-896
Sequence
strand
GGC






NR1H3-802-
Artificial
25 mer sense
AGCGGCAAGAGGAGGAACAAGC
13


822-899
Sequence
strand
UCA






NR1H3-803-
Artificial
25 mer sense
GCGGCAAGAGGAGGAACAGACUC
14


823-900
Sequence
strand
AU






NR1H3-804-
Artificial
25 mer sense
CGGCAAGAGGAGGAACAGGAUC
15


824-901
Sequence
strand
AUG






NR1H3-806-
Artificial
25 mer sense
GCAAGAGGAGGAACAGGCUAAU
16


826-903
Sequence
strand
GCC






NR1H3-808-
Artificial
25 mer sense
AAGAGGAGGAACAGGCUCAAGCC
17


828-905
Sequence
strand
AC






NR1H3-809-
Artificial
25 mer sense
AGAGGAGGAACAGGCUCAUACCA
18


829-906
Sequence
strand
CA






NR1H3-810-
Artificial
25 mer sense
GAGGAGGAACAGGCUCAUGACAC
19


830-907
Sequence
strand
AU






NR1H3-811-
Artificial
25 mer sense
AGGAGGAACAGGCUCAUGCAACA
20


831-908
Sequence
strand
UC






NR1H3-813-
Artificial
25 mer sense
GAGGAACAGGCUCAUGCCAAAUC
21


833-910
Sequence
strand
CU






NR1H3-844
Artificial
25 mer sense
CCAGGGCUUCCUCACCCCCACAA
22



Sequence
strand
AU






NR1H3-895-
Artificial
25 mer sense
UGGGCAUGAUCGAGAAGCUAGU
23


915-992
Sequence
strand
CGC






NR1H3-898-
Artificial
25 mer sense
GCAUGAUCGAGAAGCUCGUAGCU
24


918-995
Sequence
strand
GC






NR1H3-915-
Artificial
25 mer sense
GUCGCUGCCCAGCAACAGUAUAA
25


935
Sequence
strand
CC






NR1H3-917-
Artificial
25 mer sense
CGCUGCCCAGCAACAGUGUAACC
26


937
Sequence
strand
GG






NR1H3-922-
Artificial
25 mer sense
CCCAGCAACAGUGUAACCGACGC
27


942
Sequence
strand
UC






NR1H3-924-
Artificial
25 mer sense
CAGCAACAGUGUAACCGGCACUC
28


944
Sequence
strand
CU






NR1H3-925-
Artificial
25 mer sense
AGCAACAGUGUAACCGGCGAUCC
29


945
Sequence
strand
UU






NR1H3-927-
Artificial
25 mer sense
CAACAGUGUAACCGGCGCUACUU
30


947
Sequence
strand
UU






NR1H3-928-
Artificial
25 mer sense
AACAGUGUAACCGGCGCUCAUUU
31


948
Sequence
strand
UC






NR1H3-929-
Artificial
25 mer sense
ACAGUGUAACCGGCGCUCCAUUU
32


949
Sequence
strand
CU






NR1H3-930-
Artificial
25 mer sense
CAGUGUAACCGGCGCUCCUAUUC
33


950
Sequence
strand
UG






NR1H3-931-
Artificial
25 mer sense
AGUGUAACCGGCGCUCCUUAUCU
34


951
Sequence
strand
GA






NR1H3-932-
Artificial
25 mer sense
GUGUAACCGGCGCUCCUUUACUG
35


952
Sequence
strand
AC






NR1H3-933-
Artificial
25 mer sense
UGUAACCGGCGCUCCUUUUAUGA
36


953
Sequence
strand
CC






NR1H3-941-
Artificial
25 mer sense
GCGCUCCUUUUCUGACCGGAUUC
37


961
Sequence
strand
GA






NR1H3-944-
Artificial
25 mer sense
CUCCUUUUCUGACCGGCUUAGAG
38


964
Sequence
strand
UC






NR1H3-945-
Artificial
25 mer sense
UCCUUUUCUGACCGGCUUCAAGU
39


965
Sequence
strand
CA






NR1H3-946-
Artificial
25 mer sense
CCUUUUCUGACCGGCUUCGAGUC
40


966
Sequence
strand
AC






NR1H3-947-
Artificial
25 mer sense
CUUUUCUGACCGGCUUCGAAUCA
41


967
Sequence
strand
CG






NR1H3-949-
Artificial
25 mer sense
UUUCUGACCGGCUUCGAGUAACG
42


969
Sequence
strand
CC






NR1H3-951-
Artificial
25 mer sense
UCUGACCGGCUUCGAGUCAAGCC
43


971
Sequence
strand
UU






NR1H3-952-
Artificial
25 mer sense
CUGACCGGCUUCGAGUCACACCU
44


972
Sequence
strand
UG






NR1H3-953-
Artificial
25 mer sense
UGACCGGCUUCGAGUCACGACUU
45


973
Sequence
strand
GG






NR1H3-1151-
Artificial
25 mer sense
GGUGAUGCUUCUGGAGACAACUC
46


1171
Sequence
strand
GG






NR1H3-1153-
Artificial
25 mer sense
UGAUGCUUCUGGAGACAUCACGG
47


1173
Sequence
strand
AG






NR1H3-1154-
Artificial
25 mer sense
GAUGCUUCUGGAGACAUCUAGG
48


1174
Sequence
strand
AGG






NR1H3-1155-
Artificial
25 mer sense
AUGCUUCUGGAGACAUCUCAGAG
49


1175
Sequence
strand
GU






NR1H3-1156-
Artificial
25 mer sense
UGCUUCUGGAGACAUCUCGAAGG
50


1176
Sequence
strand
UA






NR1H3-1157-
Artificial
25 mer sense
GCUUCUGGAGACAUCUCGGAGGU
51


1177
Sequence
strand
AC






NR1H3-1158-
Artificial
25 mer sense
CUUCUGGAGACAUCUCGGAAGUA
52


1178
Sequence
strand
CA






NR1H3-1159-
Artificial
25 mer sense
UUCUGGAGACAUCUCGGAGAUAC
53


1179
Sequence
strand
AA






NR1H3-1160-
Artificial
25 mer sense
UCUGGAGACAUCUCGGAGGAACA
54


1180
Sequence
strand
AC






NR1H3-1161-
Artificial
25 mer sense
CUGGAGACAUCUCGGAGGUACAA
55


1181
Sequence
strand
CC






NR1H3-1162-
Artificial
25 mer sense
UGGAGACAUCUCGGAGGUAAAA
56


1182
Sequence
strand
CCC






NR1H3-1163-
Artificial
25 mer sense
GGAGACAUCUCGGAGGUACAACC
57


1183
Sequence
strand
CU






NR1H3-1164-
Artificial
25 mer sense
GAGACAUCUCGGAGGUACAACCC
58


1184
Sequence
strand
UG






NR1H3-1165-
Artificial
25 mer sense
AGACAUCUCGGAGGUACAAACCU
59


1185
Sequence
strand
GG






NR1H3-1166-
Artificial
25 mer sense
GACAUCUCGGAGGUACAACACUG
60


1186
Sequence
strand
GG






NR1H3-1167-
Artificial
25 mer sense
ACAUCUCGGAGGUACAACCAUGG
61


1187
Sequence
strand
GA






NR1H3-1169-
Artificial
25 mer sense
AUCUCGGAGGUACAACCCUAGGA
62


1189
Sequence
strand
GU






NR1H3-1170-
Artificial
25 mer sense
UCUCGGAGGUACAACCCUGAGAG
63


1190
Sequence
strand
UG






NR1H3-1171-
Artificial
25 mer sense
CUCGGAGGUACAACCCUGGAAGU
64


1191
Sequence
strand
GA






NR1H3-1173-
Artificial
25 mer sense
CGGAGGUACAACCCUGGGAAUGA
65


1193
Sequence
strand
GA






NR1H3-1175-
Artificial
25 mer sense
GAGGUACAACCCUGGGAGUAAG
66


1195
Sequence
strand
AGU






NR1H3-1176-
Artificial
25 mer sense
AGGUACAACCCUGGGAGUGAGA
67


1196
Sequence
strand
GUA






NR1H3-1177-
Artificial
25 mer sense
GGUACAACCCUGGGAGUGAAAG
68


1197
Sequence
strand
UAU






NR1H3-1178-
Artificial
25 mer sense
GUACAACCCUGGGAGUGAGAGU
69


1198
Sequence
strand
AUC






NR1H3-1179-
Artificial
25 mer sense
UACAACCCUGGGAGUGAGAAUA
70


1199
Sequence
strand
UCA






NR1H3-1180-
Artificial
25 mer sense
ACAACCCUGGGAGUGAGAGAAUC
71


1200
Sequence
strand
AC






NR1H3-1181-
Artificial
25 mer sense
CAACCCUGGGAGUGAGAGUAUCA
72


1201
Sequence
strand
CC






NR1H3-1182-
Artificial
25 mer sense
AACCCUGGGAGUGAGAGUAACAC
73


1202
Sequence
strand
CU






NR1H3-1183-
Artificial
25 mer sense
ACCCUGGGAGUGAGAGUAUAACC
74


1203
Sequence
strand
UU






NR1H3-1184-
Artificial
25 mer sense
CCCUGGGAGUGAGAGUAUCACCU
75


1204
Sequence
strand
UC






NR1H3-1185-
Artificial
25 mer sense
CCUGGGAGUGAGAGUAUCAACU
76


1205
Sequence
strand
UCC






NR1H3-1186-
Artificial
25 mer sense
CUGGGAGUGAGAGUAUCACAUU
77


1206
Sequence
strand
CCU






NR1H3-1187-
Artificial
25 mer sense
UGGGAGUGAGAGUAUCACCAUCC
78


1207
Sequence
strand
UC






NR1H3-1188-
Artificial
25 mer sense
GGGAGUGAGAGUAUCACCUACCU
79


1208
Sequence
strand
CA






NR1H3-1190-
Artificial
25 mer sense
GAGUGAGAGUAUCACCUUCAUCA
80


1210
Sequence
strand
AG






NR1H3-1191-
Artificial
25 mer sense
AGUGAGAGUAUCACCUUCCACAA
81


1211
Sequence
strand
GG






NR1H3-1192-
Artificial
25 mer sense
GUGAGAGUAUCACCUUCCUAAAG
82


1212
Sequence
strand
GA






NR1H3-1193-
Artificial
25 mer sense
UGAGAGUAUCACCUUCCUCAAGG
83


1213
Sequence
strand
AU






NR1H3-1194-
Artificial
25 mer sense
GAGAGUAUCACCUUCCUCAAGGA
84


1214
Sequence
strand
UU






NR1H3-1196-
Artificial
25 mer sense
GAGUAUCACCUUCCUCAAGAAUU
85


1216
Sequence
strand
UC






NR1H3-1197-
Artificial
25 mer sense
AGUAUCACCUUCCUCAAGGAUUU
86


1217
Sequence
strand
CA






NR1H3-1198-
Artificial
25 mer sense
GUAUCACCUUCCUCAAGGAAUUC
87


1218
Sequence
strand
AG






NR1H3-1199-
Artificial
25 mer sense
UAUCACCUUCCUCAAGGAUAUCA
88


1219
Sequence
strand
GU






NR1H3-1200-
Artificial
25 mer sense
AUCACCUUCCUCAAGGAUUACAG
89


1220
Sequence
strand
UU






NR1H3-1203-
Artificial
25 mer sense
ACCUUCCUCAAGGAUUUCAAUUA
90


1223
Sequence
strand
UA






NR1H3-1204-
Artificial
25 mer sense
CCUUCCUCAAGGAUUUCAGAUAU
91


1224
Sequence
strand
AA






NR1H3-1207-
Artificial
25 mer sense
UCCUCAAGGAUUUCAGUUAAAAC
92


1227
Sequence
strand
CG






NR1H3-1211-
Artificial
25 mer sense
CAAGGAUUUCAGUUAUAACAGG
93


1231
Sequence
strand
GAA






NR1H3-1212-
Artificial
25 mer sense
AAGGAUUUCAGUUAUAACCAGG
94


1232
Sequence
strand
AAG






NR1H3-1213-
Artificial
25 mer sense
AGGAUUUCAGUUAUAACCGAGA
95


1233
Sequence
strand
AGA






NR1H3-1214-
Artificial
25 mer sense
GGAUUUCAGUUAUAACCGGAAA
96


1234
Sequence
strand
GAC






NR1H3-1215-
Artificial
25 mer sense
GAUUUCAGUUAUAACCGGGAAG
97


1235
Sequence
strand
ACU






NR1H3-1216-
Artificial
25 mer sense
AUUUCAGUUAUAACCGGGAAGA
98


1236
Sequence
strand
CUU






NR1H3-1217-
Artificial
25 mer sense
UUUCAGUUAUAACCGGGAAAAC
99


1237
Sequence
strand
UUU






NR1H3-1218-
Artificial
25 mer sense
UUCAGUUAUAACCGGGAAGACU
100


1238
Sequence
strand
UUG






NR1H3-1219-
Artificial
25 mer sense
UCAGUUAUAACCGGGAAGAAUU
101


1239
Sequence
strand
UGC






NR1H3-1220-
Artificial
25 mer sense
CAGUUAUAACCGGGAAGACAUU
102


1240
Sequence
strand
GCC






NR1H3-1222-
Artificial
25 mer sense
GUUAUAACCGGGAAGACUUAGCC
103


1242
Sequence
strand
AA






NR1H3-1223-
Artificial
25 mer sense
UUAUAACCGGGAAGACUUUACCA
104


1243
Sequence
strand
AA






NR1H3-1224-
Artificial
25 mer sense
UAUAACCGGGAAGACUUUGACA
105


1244
Sequence
strand
AAG






NR1H3-1225-
Artificial
25 mer sense
AUAACCGGGAAGACUUUGCAAA
106


1245
Sequence
strand
AGC






NR1H3-1226-
Artificial
25 mer sense
UAACCGGGAAGACUUUGCCAAAG
107


1246
Sequence
strand
CA






NR1H3-1227-
Artificial
25 mer sense
AACCGGGAAGACUUUGCCAAAGC
108


1247
Sequence
strand
AG






NR1H3-1228-
Artificial
25 mer sense
ACCGGGAAGACUUUGCCAAAGCA
109


1248
Sequence
strand
GG






NR1H3-1229-
Artificial
25 mer sense
CCGGGAAGACUUUGCCAAAACAG
110


1249
Sequence
strand
GG






NR1H3-1232-
Artificial
25 mer sense
GGAAGACUUUGCCAAAGCAAGGC
111


1252
Sequence
strand
UG






NR1H3-1233-
Artificial
25 mer sense
GAAGACUUUGCCAAAGCAGAGCU
112


1253
Sequence
strand
GC






NR1H3-1234-
Artificial
25 mer sense
AAGACUUUGCCAAAGCAGGACUG
113


1254
Sequence
strand
CA






NR1H3-1235-
Artificial
25 mer sense
AGACUUUGCCAAAGCAGGGAUGC
114


1255
Sequence
strand
AA






NR1H3-1236-
Artificial
25 mer sense
GACUUUGCCAAAGCAGGGCAGCA
115


1256
Sequence
strand
AG






NR1H3-1237-
Artificial
25 mer sense
ACUUUGCCAAAGCAGGGCUACAA
116


1257
Sequence
strand
GU






NR1H3-1238-
Artificial
25 mer sense
CUUUGCCAAAGCAGGGCUGAAAG
117


1258
Sequence
strand
UG






NR1H3-1241-
Artificial
25 mer sense
UGCCAAAGCAGGGCUGCAAAUGG
118


1261
Sequence
strand
AA






NR1H3-1242-
Artificial
25 mer sense
GCCAAAGCAGGGCUGCAAGAGGA
119


1262
Sequence
strand
AU






NR1H3-1243-
Artificial
25 mer sense
CCAAAGCAGGGCUGCAAGUAGAA
120


1263
Sequence
strand
UU






NR1H3-1244-
Artificial
25 mer sense
CAAAGCAGGGCUGCAAGUGAAA
121


1264
Sequence
strand
UUC






NR1H3-1245-
Artificial
25 mer sense
AAAGCAGGGCUGCAAGUGGAAU
122


1265
Sequence
strand
UCA






NR1H3-1246-
Artificial
25 mer sense
AAGCAGGGCUGCAAGUGGAAUU
123


1266
Sequence
strand
CAU






NR1H3-1247-
Artificial
25 mer sense
AGCAGGGCUGCAAGUGGAAAUC
124


1267
Sequence
strand
AUC






NR1H3-1248-
Artificial
25 mer sense
GCAGGGCUGCAAGUGGAAUACA
125


1268
Sequence
strand
UCA






NR1H3-1250-
Artificial
25 mer sense
AGGGCUGCAAGUGGAAUUCAUC
126


1270
Sequence
strand
AAC






NR1H3-1251-
Artificial
25 mer sense
GGGCUGCAAGUGGAAUUCAACA
127


1271
Sequence
strand
ACC






NR1H3-1252-
Artificial
25 mer sense
GGCUGCAAGUGGAAUUCAUAAA
128


1272
Sequence
strand
CCC






NR1H3-1253-
Artificial
25 mer sense
GCUGCAAGUGGAAUUCAUCAACC
129


1273
Sequence
strand
CC






NR1H3-1256-
Artificial
25 mer sense
GCAAGUGGAAUUCAUCAACACCA
130


1276
Sequence
strand
UC






NR1H3-1258-
Artificial
25 mer sense
AAGUGGAAUUCAUCAACCCAAUC
131


1278
Sequence
strand
UU






NR1H3-1259-
Artificial
25 mer sense
AGUGGAAUUCAUCAACCCCAUCU
132


1279
Sequence
strand
UC






NR1H3-1261-
Artificial
25 mer sense
UGGAAUUCAUCAACCCCAUAUUC
133


1281
Sequence
strand
GA






NR1H3-1262-
Artificial
25 mer sense
GGAAUUCAUCAACCCCAUCAUCG
134


1282
Sequence
strand
AG






NR1H3-1265-
Artificial
25 mer sense
AUUCAUCAACCCCAUCUUCAAGU
135


1285
Sequence
strand
UC






NR1H3-1266-
Artificial
25 mer sense
UUCAUCAACCCCAUCUUCGAGUU
136


1286
Sequence
strand
CU






NR1H3-1267-
Artificial
25 mer sense
UCAUCAACCCCAUCUUCGAAUUC
137


1287
Sequence
strand
UC






NR1H3-1268-
Artificial
25 mer sense
CAUCAACCCCAUCUUCGAGAUCU
138


1288
Sequence
strand
CC






NR1H3-1269-
Artificial
25 mer sense
AUCAACCCCAUCUUCGAGUACUC
139


1289
Sequence
strand
CA






NR1H3-1270-
Artificial
25 mer sense
UCAACCCCAUCUUCGAGUUAUCC
140


1290
Sequence
strand
AG






NR1H3-1271-
Artificial
25 mer sense
CAACCCCAUCUUCGAGUUCACCA
141


1291
Sequence
strand
GG






NR1H3-1272-
Artificial
25 mer sense
AACCCCAUCUUCGAGUUCUACAG
142


1292
Sequence
strand
GG






NR1H3-1273-
Artificial
25 mer sense
ACCCCAUCUUCGAGUUCUCAAGG
143


1293
Sequence
strand
GC






NR1H3-1275-
Artificial
25 mer sense
CCCAUCUUCGAGUUCUCCAAGGC
144


1295
Sequence
strand
CA






NR1H3-1276-
Artificial
25 mer sense
CCAUCUUCGAGUUCUCCAGAGCC
145


1296
Sequence
strand
AU






NR1H3-1277-
Artificial
25 mer sense
CAUCUUCGAGUUCUCCAGGACCA
146


1297
Sequence
strand
UG






NR1H3-1278-
Artificial
25 mer sense
AUCUUCGAGUUCUCCAGGGACAU
147


1298
Sequence
strand
GA






NR1H3-1279-
Artificial
25 mer sense
UCUUCGAGUUCUCCAGGGCAAUG
148


1299
Sequence
strand
AA






NR1H3-1280-
Artificial
25 mer sense
CUUCGAGUUCUCCAGGGCCAUGA
149


1300
Sequence
strand
AU






NR1H3-1281-
Artificial
25 mer sense
UUCGAGUUCUCCAGGGCCAAGAA
150


1301
Sequence
strand
UG






NR1H3-1282-
Artificial
25 mer sense
UCGAGUUCUCCAGGGCCAUAAAU
151


1302
Sequence
strand
GA






NR1H3-1283-
Artificial
25 mer sense
CGAGUUCUCCAGGGCCAUGAAUG
152


1303
Sequence
strand
AG






NR1H3-1284-
Artificial
25 mer sense
GAGUUCUCCAGGGCCAUGAAUGA
153


1304
Sequence
strand
GC






NR1H3-1285-
Artificial
25 mer sense
AGUUCUCCAGGGCCAUGAAAGAG
154


1305
Sequence
strand
CU






NR1H3-1286-
Artificial
25 mer sense
GUUCUCCAGGGCCAUGAAUAAGC
155


1306
Sequence
strand
UG






NR1H3-1288-
Artificial
25 mer sense
UCUCCAGGGCCAUGAAUGAACUG
156


1308
Sequence
strand
CA






NR1H3-1289-
Artificial
25 mer sense
CUCCAGGGCCAUGAAUGAGAUGC
157


1309
Sequence
strand
AA






NR1H3-1290-
Artificial
25 mer sense
UCCAGGGCCAUGAAUGAGCAGCA
158


1310
Sequence
strand
AC






NR1H3-1291-
Artificial
25 mer sense
CCAGGGCCAUGAAUGAGCUACAA
159


1311
Sequence
strand
CU






NR1H3-1292-
Artificial
25 mer sense
CAGGGCCAUGAAUGAGCUGAAAC
160


1312
Sequence
strand
UC






NR1H3-1293-
Artificial
25 mer sense
AGGGCCAUGAAUGAGCUGCAACU
161


1313
Sequence
strand
CA






NR1H3-1294-
Artificial
25 mer sense
GGGCCAUGAAUGAGCUGCAACUC
162


1314
Sequence
strand
AA






NR1H3-1295-
Artificial
25 mer sense
GGCCAUGAAUGAGCUGCAAAUCA
163


1315
Sequence
strand
AU






NR1H3-1296-
Artificial
25 mer sense
GCCAUGAAUGAGCUGCAACACAA
164


1316
Sequence
strand
UG






NR1H3-1297-
Artificial
25 mer sense
CCAUGAAUGAGCUGCAACUAAAU
165


1317
Sequence
strand
GA






NR1H3-1338-
Artificial
25 mer sense
CUCAUUGCUAUCAGCAUCUACUC
166


1358
Sequence
strand
UG






NR1H3-1339-
Artificial
25 mer sense
UCAUUGCUAUCAGCAUCUUAUCU
167


1359
Sequence
strand
GC






NR1H3-1340-
Artificial
25 mer sense
CAUUGCUAUCAGCAUCUUCACUG
168


1360
Sequence
strand
CA






NR1H3-1341-
Artificial
25 mer sense
AUUGCUAUCAGCAUCUUCUAUGC
169


1361
Sequence
strand
AG






NR1H3-1342-
Artificial
25 mer sense
UUGCUAUCAGCAUCUUCUCAGCA
170


1362
Sequence
strand
GA






NR1H3-1343-
Artificial
25 mer sense
UGCUAUCAGCAUCUUCUCUACAG
171


1363
Sequence
strand
AC






NR1H3-1344-
Artificial
25 mer sense
GCUAUCAGCAUCUUCUCUGAAGA
172


1364
Sequence
strand
CC






NR1H3-1345-
Artificial
25 mer sense
CUAUCAGCAUCUUCUCUGCAGAC
173


1365
Sequence
strand
CG






NR1H3-1346-
Artificial
25 mer sense
UAUCAGCAUCUUCUCUGCAAACC
174


1366
Sequence
strand
GG






NR1H3-1347-
Artificial
25 mer sense
AUCAGCAUCUUCUCUGCAGACCG
175


1367
Sequence
strand
GC






NR1H3-1377-
Artificial
25 mer sense
GUGCAGGACCAGCUCCAGGAAGA
176


1443
Sequence
strand
GA






NR1H3-1379-
Artificial
25 mer sense
GCAGGACCAGCUCCAGGUAAAGA
177


1445
Sequence
strand
GG






NR1H3-1383-
Artificial
25 mer sense
GACCAGCUCCAGGUAGAGAAGCU
178


1449
Sequence
strand
GC






NR1H3-1384-
Artificial
25 mer sense
ACCAGCUCCAGGUAGAGAGACUG
179


1450
Sequence
strand
CA






NR1H3-1385-
Artificial
25 mer sense
CCAGCUCCAGGUAGAGAGGAUGC
180


1451
Sequence
strand
AG






NR1H3-1387-
Artificial
25 mer sense
AGCUCCAGGUAGAGAGGCUACAG
181


1453
Sequence
strand
CA






NR1H3-1388-
Artificial
25 mer sense
GCUCCAGGUAGAGAGGCUGAAGC
182


1454
Sequence
strand
AC






NR1H3-1391-
Artificial
25 mer sense
CCAGGUAGAGAGGCUGCAGAACA
183


1457
Sequence
strand
CA






NR1H3-1393-
Artificial
25 mer sense
AGGUAGAGAGGCUGCAGCAAAC
184


1459
Sequence
strand
AUA






NR1H3-1394-
Artificial
25 mer sense
GGUAGAGAGGCUGCAGCACACAU
185


1460
Sequence
strand
AU






NR1H3-1395-
Artificial
25 mer sense
GUAGAGAGGCUGCAGCACAAAU
186


1461
Sequence
strand
AUG






NR1H3-1396-
Artificial
25 mer sense
UAGAGAGGCUGCAGCACACAUAU
187


1462
Sequence
strand
GU






NR1H3-1397-
Artificial
25 mer sense
AGAGAGGCUGCAGCACACAAAUG
188


1463
Sequence
strand
UG






NR1H3-1398-
Artificial
25 mer sense
GAGAGGCUGCAGCACACAUAUGU
189


1464
Sequence
strand
GG






NR1H3-1399-
Artificial
25 mer sense
AGAGGCUGCAGCACACAUAAGUG
190


1465
Sequence
strand
GA






NR1H3-1400-
Artificial
25 mer sense
GAGGCUGCAGCACACAUAUAUGG
191


1466
Sequence
strand
AA






NR1H3-1401-
Artificial
25 mer sense
AGGCUGCAGCACACAUAUGAGGA
192


1467
Sequence
strand
AG






NR1H3-1402-
Artificial
25 mer sense
GGCUGCAGCACACAUAUGUAGAA
193


1468
Sequence
strand
GC






NR1H3-1403-
Artificial
25 mer sense
GCUGCAGCACACAUAUGUGAAAG
194


1469
Sequence
strand
CC






NR1H3-1404-
Artificial
25 mer sense
CUGCAGCACACAUAUGUGGAAGC
195


1470
Sequence
strand
CC






NR1H3-1406-
Artificial
25 mer sense
GCAGCACACAUAUGUGGAAACCC
196


1472
Sequence
strand
UG






NR1H3-1407-
Artificial
25 mer sense
CAGCACACAUAUGUGGAAGACCU
197


1473
Sequence
strand
GC






NR1H3-1408-
Artificial
25 mer sense
AGCACACAUAUGUGGAAGCACUG
198


1474
Sequence
strand
CA






NR1H3-1410-
Artificial
25 mer sense
CACACAUAUGUGGAAGCCCAGCA
199


1476
Sequence
strand
UG






NR1H3-1411-
Artificial
25 mer sense
ACACAUAUGUGGAAGCCCUACAU
200


1477
Sequence
strand
GC






NR1H3-1412-
Artificial
25 mer sense
CACAUAUGUGGAAGCCCUGAAUG
201


1478
Sequence
strand
CC






NR1H3-1413-
Artificial
25 mer sense
ACAUAUGUGGAAGCCCUGCAUGC
202


1479
Sequence
strand
CU






NR1H3-1414-
Artificial
25 mer sense
CAUAUGUGGAAGCCCUGCAAGCC
203


1480
Sequence
strand
UA






NR1H3-1415-
Artificial
25 mer sense
AUAUGUGGAAGCCCUGCAUACCU
204


1481
Sequence
strand
AC






NR1H3-1416-
Artificial
25 mer sense
UAUGUGGAAGCCCUGCAUGACUA
205


1482
Sequence
strand
CG






NR1H3-1417-
Artificial
25 mer sense
AUGUGGAAGCCCUGCAUGCAUAC
206


1483
Sequence
strand
GU






NR1H3-1418-
Artificial
25 mer sense
UGUGGAAGCCCUGCAUGCCAACG
207


1484
Sequence
strand
UC






NR1H3-1419-
Artificial
25 mer sense
GUGGAAGCCCUGCAUGCCUACGU
208


1485
Sequence
strand
CU






NR1H3-1420-
Artificial
25 mer sense
UGGAAGCCCUGCAUGCCUAAGUC
209


1486
Sequence
strand
UC






NR1H3-1421-
Artificial
25 mer sense
GGAAGCCCUGCAUGCCUACAUCU
210


1487
Sequence
strand
CC






NR1H3-1422-
Artificial
25 mer sense
GAAGCCCUGCAUGCCUACGACUC
211


1488
Sequence
strand
CA






NR1H3-1423-
Artificial
25 mer sense
AAGCCCUGCAUGCCUACGUAUCC
212


1489
Sequence
strand
AU






NR1H3-1424-
Artificial
25 mer sense
AGCCCUGCAUGCCUACGUCACCA
213


1490
Sequence
strand
UC






NR1H3-1425-
Artificial
25 mer sense
GCCCUGCAUGCCUACGUCUACAU
214


1491
Sequence
strand
CC






NR1H3-1426-
Artificial
25 mer sense
CCCUGCAUGCCUACGUCUCAAUC
215


1492
Sequence
strand
CA






NR1H3-1427-
Artificial
25 mer sense
CCUGCAUGCCUACGUCUCCAUCC
216


1493
Sequence
strand
AC






NR1H3-1428-
Artificial
25 mer sense
CUGCAUGCCUACGUCUCCAACCA
217


1494
Sequence
strand
CC






NR1H3-1429-
Artificial
25 mer sense
UGCAUGCCUACGUCUCCAUACAC
218


1495
Sequence
strand
CA






NR1H3-1430-
Artificial
25 mer sense
GCAUGCCUACGUCUCCAUCAACC
219


1496
Sequence
strand
AU






NR1H3-1431-
Artificial
25 mer sense
CAUGCCUACGUCUCCAUCCACCA
220


1497
Sequence
strand
UC






NR1H3-1432-
Artificial
25 mer sense
AUGCCUACGUCUCCAUCCAACAU
221


1498
Sequence
strand
CC






NR1H3-1433-
Artificial
25 mer sense
UGCCUACGUCUCCAUCCACAAUC
222


1499
Sequence
strand
CC






NR1H3-1434-
Artificial
25 mer sense
GCCUACGUCUCCAUCCACCAUCC
223


1500
Sequence
strand
CC






NR1H3-1435-
Artificial
25 mer sense
CCUACGUCUCCAUCCACCAACCC
224


1501
Sequence
strand
CA






NR1H3-1436-
Artificial
25 mer sense
CUACGUCUCCAUCCACCAUACCC
225


1502
Sequence
strand
AU






NR1H3-1437-
Artificial
25 mer sense
UACGUCUCCAUCCACCAUCACCA
226


1503
Sequence
strand
UG






NR1H3-1438-
Artificial
25 mer sense
ACGUCUCCAUCCACCAUCCACAU
227


1504
Sequence
strand
GA






NR1H3-1439-
Artificial
25 mer sense
CGUCUCCAUCCACCAUCCCAAUG
228


1505
Sequence
strand
AC






NR1H3-1440-
Artificial
25 mer sense
GUCUCCAUCCACCAUCCCCAUGA
229


1506
Sequence
strand
CC






NR1H3-1442-
Artificial
25 mer sense
CUCCAUCCACCAUCCCCAUAACC
230


1508
Sequence
strand
GA






NR1H3-1443-
Artificial
25 mer sense
UCCAUCCACCAUCCCCAUGACCG
231


1509
Sequence
strand
AC






NR1H3-1444-
Artificial
25 mer sense
CCAUCCACCAUCCCCAUGAACGA
232


1510
Sequence
strand
CU






NR1H3-1445-
Artificial
25 mer sense
CAUCCACCAUCCCCAUGACAGAC
233


1511
Sequence
strand
UG






NR1H3-1446-
Artificial
25 mer sense
AUCCACCAUCCCCAUGACCAACU
234


1512
Sequence
strand
GA






NR1H3-1447-
Artificial
25 mer sense
UCCACCAUCCCCAUGACCGACUG
235


1513
Sequence
strand
AU






NR1H3-1448-
Artificial
25 mer sense
CCACCAUCCCCAUGACCGAAUGA
236


1514
Sequence
strand
UG






NR1H3-1449-
Artificial
25 mer sense
CACCAUCCCCAUGACCGACAGAU
237


1515
Sequence
strand
GU






NR1H3-1450-
Artificial
25 mer sense
ACCAUCCCCAUGACCGACUAAUG
238


1516
Sequence
strand
UU






NR1H3-1451-
Artificial
25 mer sense
CCAUCCCCAUGACCGACUGAUGU
239


1517
Sequence
strand
UC






NR1H3-1452-
Artificial
25 mer sense
CAUCCCCAUGACCGACUGAAGUU
240


1518
Sequence
strand
CC






NR1H3-1453-
Artificial
25 mer sense
AUCCCCAUGACCGACUGAUAUUC
241


1519
Sequence
strand
CC






NR1H3-1454-
Artificial
25 mer sense
UCCCCAUGACCGACUGAUGAUCC
242


1520
Sequence
strand
CA






NR1H3-1455-
Artificial
25 mer sense
CCCCAUGACCGACUGAUGUACCC
243


1521
Sequence
strand
AC






NR1H3-1456-
Artificial
25 mer sense
CCCAUGACCGACUGAUGUUACCA
244


1522
Sequence
strand
CG






NR1H3-1457-
Artificial
25 mer sense
CCAUGACCGACUGAUGUUCACAC
245


1523
Sequence
strand
GG






NR1H3-1459-
Artificial
25 mer sense
AUGACCGACUGAUGUUCCCACGG
246


1525
Sequence
strand
AU






NR1H3-1460-
Artificial
25 mer sense
UGACCGACUGAUGUUCCCAAGGA
247


1526
Sequence
strand
UG






NR1H3-1461-
Artificial
25 mer sense
GACCGACUGAUGUUCCCACAGAU
248


1527
Sequence
strand
GC






NR1H3-1462-
Artificial
25 mer sense
ACCGACUGAUGUUCCCACGAAUG
249


1528
Sequence
strand
CU






NR1H3-1463-
Artificial
25 mer sense
CCGACUGAUGUUCCCACGGAUGC
250


1529
Sequence
strand
UA






NR1H3-1465-
Artificial
25 mer sense
GACUGAUGUUCCCACGGAUACUA
251


1531
Sequence
strand
AU






NR1H3-1466-
Artificial
25 mer sense
ACUGAUGUUCCCACGGAUGAUAA
252


1532
Sequence
strand
UG






NR1H3-1468-
Artificial
25 mer sense
UGAUGUUCCCACGGAUGCUAAUG
253


1534
Sequence
strand
AA






NR1H3-1469-
Artificial
25 mer sense
GAUGUUCCCACGGAUGCUAAUGA
254


1535
Sequence
strand
AA






NR1H3-1471-
Artificial
25 mer sense
UGUUCCCACGGAUGCUAAUAAAA
255


1537
Sequence
strand
CU






NR1H3-1472-
Artificial
25 mer sense
GUUCCCACGGAUGCUAAUGAAAC
256


1538
Sequence
strand
UG






NR1H3-1473-
Artificial
25 mer sense
UUCCCACGGAUGCUAAUGAAACU
257


1539
Sequence
strand
GG






NR1H3-1474-
Artificial
25 mer sense
UCCCACGGAUGCUAAUGAAACUG
258


1540
Sequence
strand
GU






NR1H3-1475-
Artificial
25 mer sense
CCCACGGAUGCUAAUGAAAAUGG
259


1541
Sequence
strand
UG






NR1H3-1476-
Artificial
25 mer sense
CCACGGAUGCUAAUGAAACAGGU
260


1542
Sequence
strand
GA






NR1H3-1477-
Artificial
25 mer sense
CACGGAUGCUAAUGAAACUAGU
261


1543
Sequence
strand
GAG






NR1H3-1478-
Artificial
25 mer sense
ACGGAUGCUAAUGAAACUGAUG
262


1544
Sequence
strand
AGC






NR1H3-1479-
Artificial
25 mer sense
CGGAUGCUAAUGAAACUGGAGA
263


1545
Sequence
strand
GCC






NR1H3-1480-
Artificial
25 mer sense
GGAUGCUAAUGAAACUGGUAAG
264


1546
Sequence
strand
CCU






NR1H3-1481-
Artificial
25 mer sense
GAUGCUAAUGAAACUGGUGAGC
265


1547
Sequence
strand
CUC






NR1H3-1483-
Artificial
25 mer sense
UGCUAAUGAAACUGGUGAGACU
266


1549
Sequence
strand
CCG






NR1H3-1484-
Artificial
25 mer sense
GCUAAUGAAACUGGUGAGCAUCC
267


1550
Sequence
strand
GG






NR1H3-1485-
Artificial
25 mer sense
CUAAUGAAACUGGUGAGCCACCG
268


1551
Sequence
strand
GA






NR1H3-1486-
Artificial
25 mer sense
UAAUGAAACUGGUGAGCCUACG
269


1552
Sequence
strand
GAC






NR1H3-1487-
Artificial
25 mer sense
AAUGAAACUGGUGAGCCUCAGG
270


1553
Sequence
strand
ACC






NR1H3-1488-
Artificial
25 mer sense
AUGAAACUGGUGAGCCUCCAGAC
271


1554
Sequence
strand
CC






NR1H3-1489-
Artificial
25 mer sense
UGAAACUGGUGAGCCUCCGAACC
272


1555
Sequence
strand
CU






NR1H3-1491-
Artificial
25 mer sense
AAACUGGUGAGCCUCCGGAACCU
273


1557
Sequence
strand
GA






NR1H3-1492-
Artificial
25 mer sense
AACUGGUGAGCCUCCGGACACUG
274


1558
Sequence
strand
AG






NR1H3-1494-
Artificial
25 mer sense
CUGGUGAGCCUCCGGACCCAGAG
275


1560
Sequence
strand
CA






NR1H3-1505-
Artificial
25 mer sense
CCGGACCCUGAGCAGCGUCAACU
276


1571
Sequence
strand
CA






NR1H3-1507-
Artificial
25 mer sense
GGACCCUGAGCAGCGUCCAAUCA
277


1573
Sequence
strand
GA






NR1H3-1508-
Artificial
25 mer sense
GACCCUGAGCAGCGUCCACACAG
278


1574
Sequence
strand
AG






NR1H3-1509-
Artificial
25 mer sense
ACCCUGAGCAGCGUCCACUAAGA
279


1575
Sequence
strand
GC






NR1H3-1510-
Artificial
25 mer sense
CCCUGAGCAGCGUCCACUCAGAG
280


1576
Sequence
strand
CA






NR1H3-1511-
Artificial
25 mer sense
CCUGAGCAGCGUCCACUCAAAGC
281


1577
Sequence
strand
AA






NR1H3-1512-
Artificial
25 mer sense
CUGAGCAGCGUCCACUCAGAGCA
282


1578
Sequence
strand
AG






NR1H3-1513-
Artificial
25 mer sense
UGAGCAGCGUCCACUCAGAACAA
283


1579
Sequence
strand
GU






NR1H3-1514-
Artificial
25 mer sense
GAGCAGCGUCCACUCAGAGAAAG
284


1580
Sequence
strand
UG






NR1H3-1515-
Artificial
25 mer sense
AGCAGCGUCCACUCAGAGCAAGU
285


1581
Sequence
strand
GU






NR1H3-1516-
Artificial
25 mer sense
GCAGCGUCCACUCAGAGCAAGUG
286


1582
Sequence
strand
UU






NR1H3-1517-
Artificial
25 mer sense
CAGCGUCCACUCAGAGCAAAUGU
287


1583
Sequence
strand
UU






NR1H3-1518-
Artificial
25 mer sense
AGCGUCCACUCAGAGCAAGAGUU
288


1584
Sequence
strand
UG






NR1H3-1519-
Artificial
25 mer sense
GCGUCCACUCAGAGCAAGUAUUU
289


1585
Sequence
strand
GC






NR1H3-1520-
Artificial
25 mer sense
CGUCCACUCAGAGCAAGUGAUUG
290


1586
Sequence
strand
CA






NR1H3-1521-
Artificial
25 mer sense
GUCCACUCAGAGCAAGUGUAUGC
291


1587
Sequence
strand
AC






NR1H3-1522-
Artificial
25 mer sense
UCCACUCAGAGCAAGUGUUAGCA
292


1588
Sequence
strand
CU






NR1H3-1523-
Artificial
25 mer sense
CCACUCAGAGCAAGUGUUUACAC
293


1589
Sequence
strand
UG






NR1H3-1525-
Artificial
25 mer sense
ACUCAGAGCAAGUGUUUGCACUG
294


1591
Sequence
strand
CG






NR1H3-1526-
Artificial
25 mer sense
CUCAGAGCAAGUGUUUGCAAUGC
295


1592
Sequence
strand
GU






NR1H3-1527-
Artificial
25 mer sense
UCAGAGCAAGUGUUUGCACAGCG
296


1593
Sequence
strand
UC






NR1H3-1528-
Artificial
25 mer sense
CAGAGCAAGUGUUUGCACUACGU
297


1594
Sequence
strand
CU






NR1H3-1529-
Artificial
25 mer sense
AGAGCAAGUGUUUGCACUGAGU
298


1595
Sequence
strand
CUG






NR1H3-1530-
Artificial
25 mer sense
GAGCAAGUGUUUGCACUGCAUCU
299


1596
Sequence
strand
GC






NR1H3-1531-
Artificial
25 mer sense
AGCAAGUGUUUGCACUGCGACUG
300


1597
Sequence
strand
CA






NR1H3-1532-
Artificial
25 mer sense
GCAAGUGUUUGCACUGCGUAUGC
301


1598
Sequence
strand
AGA






NR1H3-1533-
Artificial
25 mer sense
CAAGUGUUUGCACUGCGUCAGC
302


1599
Sequence
strand
GG






NR1H3-1534-
Artificial
25 mer sense
AAGUGUUUGCACUGCGUCUACAG
303


1600
Sequence
strand
GA






NR1H3-1535-
Artificial
25 mer sense
AGUGUUUGCACUGCGUCUGAAG
304


1601
Sequence
strand
GAC






NR1H3-1536-
Artificial
25 mer sense
GUGUUUGCACUGCGUCUGCAGGA
305


1602
Sequence
strand
CA






NR1H3-1537-
Artificial
25 mer sense
UGUUUGCACUGCGUCUGCAAGAC
306


1603
Sequence
strand
AA






NR1H3-1538-
Artificial
25 mer sense
GUUUGCACUGCGUCUGCAGAACA
307


1604
Sequence
strand
AA






NR1H3-1539-
Artificial
25 mer sense
UUUGCACUGCGUCUGCAGGACAA
308


1605
Sequence
strand
AA






NR1H3-1540-
Artificial
25 mer sense
UUGCACUGCGUCUGCAGGAAAAA
309


1606
Sequence
strand
AA






NR1H3-1541-
Artificial
25 mer sense
UGCACUGCGUCUGCAGGACAAAA
310


1607
Sequence
strand
AG






NR1H3-1542-
Artificial
25 mer sense
GCACUGCGUCUGCAGGACAAAAA
311


1608
Sequence
strand
GC






NR1H3-1543-
Artificial
25 mer sense
CACUGCGUCUGCAGGACAAAAAG
312


1609
Sequence
strand
CU






NR1H3-1544-
Artificial
25 mer sense
ACUGCGUCUGCAGGACAAAAAGC
313


1610
Sequence
strand
UC






NR1H3-1545-
Artificial
25 mer sense
CUGCGUCUGCAGGACAAAAAGCU
314


1611
Sequence
strand
CC






NR1H3-1546-
Artificial
25 mer sense
UGCGUCUGCAGGACAAAAAACUC
315


1612
Sequence
strand
CC






NR1H3-1547-
Artificial
25 mer sense
GCGUCUGCAGGACAAAAAGAUCC
316


1613
Sequence
strand
CA






NR1H3-1548-
Artificial
25 mer sense
CGUCUGCAGGACAAAAAGCACCC
317


1614
Sequence
strand
AC






NR1H3-1549-
Artificial
25 mer sense
GUCUGCAGGACAAAAAGCUACCA
318


1615
Sequence
strand
CC






NR1H3-1550-
Artificial
25 mer sense
UCUGCAGGACAAAAAGCUCACAC
319


1616
Sequence
strand
CG






NR1H3-1551-
Artificial
25 mer sense
CUGCAGGACAAAAAGCUCCAACC
320


1617
Sequence
strand
GC






NR1H3-1553-
Artificial
25 mer sense
GCAGGACAAAAAGCUCCCAACGC
321


1619
Sequence
strand
UG






NR1H3-1554-
Artificial
25 mer sense
CAGGACAAAAAGCUCCCACAGCU
322


1620
Sequence
strand
GC






NR1H3-1555-
Artificial
25 mer sense
AGGACAAAAAGCUCCCACCACUG
323


1621
Sequence
strand
CU






NR1H3-1556-
Artificial
25 mer sense
GGACAAAAAGCUCCCACCGAUGC
324


1622
Sequence
strand
UC






NR1H3-1558-
Artificial
25 mer sense
ACAAAAAGCUCCCACCGCUACUC
325


1624
Sequence
strand
UC






NR1H3-1559-
Artificial
25 mer sense
CAAAAAGCUCCCACCGCUGAUCU
326


1625
Sequence
strand
CU






NR1H3-1560-
Artificial
25 mer sense
AAAAAGCUCCCACCGCUGCACUC
327


1626
Sequence
strand
UG






NR1H3-1561-
Artificial
25 mer sense
AAAAGCUCCCACCGCUGCUAUCU
328


1627
Sequence
strand
GA






NR1H3-1562-
Artificial
25 mer sense
AAAGCUCCCACCGCUGCUCACUG
329


1628
Sequence
strand
AG






NR1H3-1563-
Artificial
25 mer sense
AAGCUCCCACCGCUGCUCUAUGA
330


1629
Sequence
strand
GA






NR1H3-1564-
Artificial
25 mer sense
AGCUCCCACCGCUGCUCUCAGAG
331


1630
Sequence
strand
AU






NR1H3-1565-
Artificial
25 mer sense
GCUCCCACCGCUGCUCUCUAAGA
332


1631
Sequence
strand
UC






NR1H3-1567-
Artificial
25 mer sense
UCCCACCGCUGCUCUCUGAAAUC
333


1633
Sequence
strand
UG






NR1H3-1569-
Artificial
25 mer sense
CCACCGCUGCUCUCUGAGAACUG
334


1635
Sequence
strand
GG






NR1H3-1570-
Artificial
25 mer sense
CACCGCUGCUCUCUGAGAUAUGG
335


1636
Sequence
strand
GA






NR1H3-1572-
Artificial
25 mer sense
CCGCUGCUCUCUGAGAUCUAGGA
336


1638
Sequence
strand
UG






NR1H3-1573-
Artificial
25 mer sense
CGCUGCUCUCUGAGAUCUGAGAU
337


1639
Sequence
strand
GU






NR1H3-1574-
Artificial
25 mer sense
GCUGCUCUCUGAGAUCUGGAAUG
338


1640
Sequence
strand
UG






NR1H3-1577-
Artificial
25 mer sense
GCUCUCUGAGAUCUGGGAUAUGC
339


1643
Sequence
strand
AC






NR1H3-1579-
Artificial
25 mer sense
UCUCUGAGAUCUGGGAUGUACAC
340


1645
Sequence
strand
GA






NR1H3-1580-
Artificial
25 mer sense
CUCUGAGAUCUGGGAUGUGAAC
341


1646
Sequence
strand
GAA






NR1H3-1581-
Artificial
25 mer sense
UCUGAGAUCUGGGAUGUGCACG
342


1647
Sequence
strand
AAU






NR1H3-1582-
Artificial
25 mer sense
CUGAGAUCUGGGAUGUGCAAGA
343


1648
Sequence
strand
AUG






NR1H3-1583-
Artificial
25 mer sense
UGAGAUCUGGGAUGUGCACAAA
344


1649
Sequence
strand
UGA






NR1H3-1584-
Artificial
25 mer sense
GAGAUCUGGGAUGUGCACGAAU
345


1650
Sequence
strand
GAC






NR1H3-1585-
Artificial
25 mer sense
AGAUCUGGGAUGUGCACGAAUG
346


1651
Sequence
strand
ACU






NR1H3-1586-
Artificial
25 mer sense
GAUCUGGGAUGUGCACGAAAGA
347


1652
Sequence
strand
CUG






NR1H3-1587-
Artificial
25 mer sense
AUCUGGGAUGUGCACGAAUAAC
348


1653
Sequence
strand
UGU






NR1H3-1588-
Artificial
25 mer sense
UCUGGGAUGUGCACGAAUGACU
349


1654
Sequence
strand
GUU






NR1H3-1589-
Artificial
25 mer sense
CUGGGAUGUGCACGAAUGAAUG
350


1655
Sequence
strand
UUC






NR1H3-1590-
Artificial
25 mer sense
UGGGAUGUGCACGAAUGACAGU
351


1656
Sequence
strand
UCU






NR1H3-1591-
Artificial
25 mer sense
GGGAUGUGCACGAAUGACUAUU
352


1657
Sequence
strand
CUG






NR1H3-1592-
Artificial
25 mer sense
GGAUGUGCACGAAUGACUGAUC
353


1658
Sequence
strand
UGU






NR1H3-1593-
Artificial
25 mer sense
GAUGUGCACGAAUGACUGUACU
354


1659
Sequence
strand
GUC






NR1H3-1656-
Artificial
25 mer sense
UGGUGGCUGCCUCCUAGAAAUGG
355


1720
Sequence
strand
AA






NR1H3-1657-
Artificial
25 mer sense
GGUGGCUGCCUCCUAGAAGAGGA
356


1721
Sequence
strand
AC






NR1H3-1658-
Artificial
25 mer sense
GUGGCUGCCUCCUAGAAGUAGAA
357


1722
Sequence
strand
CA






NR1H3-1659-
Artificial
25 mer sense
UGGCUGCCUCCUAGAAGUGAAAC
358


1723
Sequence
strand
AG






NR1H3-1660-
Artificial
25 mer sense
GGCUGCCUCCUAGAAGUGGAACA
359


1724
Sequence
strand
GA






NR1H3-1661-
Artificial
25 mer sense
GCUGCCUCCUAGAAGUGGAACAG
360


1725
Sequence
strand
AC






NR1H3-1662-
Artificial
25 mer sense
CUGCCUCCUAGAAGUGGAAAAGA
361


1726
Sequence
strand
CU






NR1H3-1663-
Artificial
25 mer sense
UGCCUCCUAGAAGUGGAACAGAC
362


1727
Sequence
strand
UG






NR1H3-1664-
Artificial
25 mer sense
GCCUCCUAGAAGUGGAACAAACU
363


1728
Sequence
strand
GA






NR1H3-1665-
Artificial
25 mer sense
CCUCCUAGAAGUGGAACAGACUG
364


1729
Sequence
strand
AG






NR1H3-1666-
Artificial
25 mer sense
CUCCUAGAAGUGGAACAGAAUG
365


1730
Sequence
strand
AGA






NR1H3-1667-
Artificial
25 mer sense
UCCUAGAAGUGGAACAGACAGA
366


1731
Sequence
strand
GAA






NR1H3-1668-
Artificial
25 mer sense
CCUAGAAGUGGAACAGACUAAG
367


1732
Sequence
strand
AAG






NR1H3-1669-
Artificial
25 mer sense
CUAGAAGUGGAACAGACUGAGA
368


1733
Sequence
strand
AGG






NR1H3-1671-
Artificial
25 mer sense
AGAAGUGGAACAGACUGAGAAG
369


1735
Sequence
strand
GGC






NR1H3-1677-
Artificial
25 mer sense
GGAACAGACUGAGAAGGGCAAA
370


1741
Sequence
strand
CAU






NR1H3-1679-
Artificial
25 mer sense
AACAGACUGAGAAGGGCAAACA
371


1743
Sequence
strand
UUC






NR1H3-1680-
Artificial
25 mer sense
ACAGACUGAGAAGGGCAAAAAU
372


1744
Sequence
strand
UCC






NR1H3-1681-
Artificial
25 mer sense
CAGACUGAGAAGGGCAAACAUUC
373


1745
Sequence
strand
CU






NR1H3-1682-
Artificial
25 mer sense
AGACUGAGAAGGGCAAACAAUCC
374


1746
Sequence
strand
UG






NR1H3-1683-
Artificial
25 mer sense
GACUGAGAAGGGCAAACAUACCU
375


1747
Sequence
strand
GG






NR1H3-1684-
Artificial
25 mer sense
ACUGAGAAGGGCAAACAUUACU
376


1748
Sequence
strand
GGG






NR1H3-1685-
Artificial
25 mer sense
CUGAGAAGGGCAAACAUUCAUG
377


1749
Sequence
strand
GGA






NR1H3-1686-
Artificial
25 mer sense
UGAGAAGGGCAAACAUUCCAGG
378


1750
Sequence
strand
GAG






NR1H3-1687-
Artificial
25 mer sense
GAGAAGGGCAAACAUUCCUAGG
379


1751
Sequence
strand
AGC






NR1H3-1728-
Artificial
25 mer sense
CCCGUGGCAUUAAAAGAGAAUCA
380


1792
Sequence
strand
AA






NR1H3-1729-
Artificial
25 mer sense
CCGUGGCAUUAAAAGAGAGACA
381


1793
Sequence
strand
AAG






NR1H3-1730-
Artificial
25 mer sense
CGUGGCAUUAAAAGAGAGUAAA
382


1794
Sequence
strand
AGG






NR1H3-1731-
Artificial
25 mer sense
GUGGCAUUAAAAGAGAGUCAAA
383


1795
Sequence
strand
GGG






NR1H3-1732-
Artificial
25 mer sense
UGGCAUUAAAAGAGAGUCAAAG
384


1796
Sequence
strand
GGU






NR1H3-764-
Artificial
27 mer
GCGGAUCUGUUCUUCUGACAGGA
385


784-861
Sequence
antisense
CACA





strand







NR1H3-766-
Artificial
27 mer
AGGCGUAUCUGUUCUUCUGACAG
386


786-863
Sequence
antisense
GACA





strand







NR1H3-789-
Artificial
27 mer
CCUCUUGCCGCUUCAGUUUCUUC
387


809-886
Sequence
antisense
AGGC





strand







NR1H3-790-
Artificial
27 mer
UCCUCUUGCCGCUUCAGUUUCUU
388


810-887
Sequence
antisense
CAGG





strand







NR1H3-791-
Artificial
27 mer
CUCCUUUUGCCGCUUCAGUUUCU
389


811-888
Sequence
antisense
UCAG





strand







NR1H3-792-
Artificial
27 mer
CCUCCUCUUGCCGCUUCAGUUUC
390


812-889
Sequence
antisense
UUCA





strand







NR1H3-793-
Artificial
27 mer
UCCUCUUCUUGCCGCUUCAGUUU
391


813-890
Sequence
antisense
CUUC





strand







NR1H3-795-
Artificial
27 mer
GUUCCUCCUCUUGCCGCUUCAGU
392


815-892
Sequence
antisense
UUCU





strand







NR1H3-796-
Artificial
27 mer
UGUUCUUCCUCUUGCCGCUUCAG
393


816-893
Sequence
antisense
UUUC





strand







NR1H3-797-
Artificial
27 mer
CUGUUUCUCCUCUUGCCGCUUCA
394


817-894
Sequence
antisense
GUUU





strand







NR1H3-798-
Artificial
27 mer
CCUGUUCCUCCUCUUGCCGCUUC
395


818-895
Sequence
antisense
AGUU





strand







NR1H3-799-
Artificial
27 mer
GCCUGUUCCUCCUCUUGCCGCUU
396


819-896
Sequence
antisense
CAGU





strand







NR1H3-802-
Artificial
27 mer
UGAGCUUGUUCCUCCUCUUGCCG
397


822-899
Sequence
antisense
CUUC





strand







NR1H3-803-
Artificial
27 mer
AUGAGUCUGUUCCUCCUCUUGCC
398


823-900
Sequence
antisense
GCUU





strand







NR1H3-804-
Artificial
27 mer
CAUGAUCCUGUUCCUCCUCUUGC
399


824-901
Sequence
antisense
CGCU





strand







NR1H3-806-
Artificial
27 mer
GGCAUUAGCCUGUUCCUCCUCUU
400


826-903
Sequence
antisense
GCCG





strand







NR1H3-808-
Artificial
27 mer
GUGGCUUGAGCCUGUUCCUCCUC
401


828-905
Sequence
antisense
UUGC





strand







NR1H3-809-
Artificial
27 mer
UGUGGUAUGAGCCUGUUCCUCCU
402


829-906
Sequence
antisense
CUUG





strand







NR1H3-810-
Artificial
27 mer
AUGUGUCAUGAGCCUGUUCCUCC
403


830-907
Sequence
antisense
UCUU





strand







NR1H3-811-
Artificial
27 mer
GAUGUUGCAUGAGCCUGUUCCUC
404


831-908
Sequence
antisense
CUCU





strand







NR1H3-813-
Artificial
27 mer
AGGAUUUGGCAUGAGCCUGUUCC
405


833-910
Sequence
antisense
UCCU





strand







NR1H3-844
Artificial
27 mer
AUUUGUGGGGGUGAGGAAGCCC
406



Sequence
antisense
UGGGG





strand







NR1H3-895-
Artificial
27 mer
GCGACUAGCUUCUCGAUCAUGCC
407


915-992
Sequence
antisense
CAGU





strand







NR1H3-898-
Artificial
27 mer
GCAGCUACGAGCUUCUCGAUCAU
408


918-995
Sequence
antisense
GCCC





strand







NR1H3-915-
Artificial
27 mer
GGUUAUACUGUUGCUGGGCAGC
409


935
Sequence
antisense
GACGA





strand







NR1H3-917-
Artificial
27 mer
CCGGUUACACUGUUGCUGGGCAG
410


937
Sequence
antisense
CGAC





strand







NR1H3-922-
Artificial
27 mer
GAGCGUCGGUUACACUGUUGCUG
411


942
Sequence
antisense
GGCA





strand







NR1H3-924-
Artificial
27 mer
AGGAGUGCCGGUUACACUGUUGC
412


944
Sequence
antisense
UGGG





strand







NR1H3-925-
Artificial
27 mer
AAGGAUCGCCGGUUACACUGUUG
413


945
Sequence
antisense
CUGG





strand







NR1H3-927-
Artificial
27 mer
AAAAGUAGCGCCGGUUACACUGU
414


947
Sequence
antisense
UGCU





strand







NR1H3-928-
Artificial
27 mer
GAAAAUGAGCGCCGGUUACACUG
415


948
Sequence
antisense
UUGC





strand







NR1H3-929-
Artificial
27 mer
AGAAAUGGAGCGCCGGUUACACU
416


949
Sequence
antisense
GUUG





strand







NR1H3-930-
Artificial
27 mer
CAGAAUAGGAGCGCCGGUUACAC
417


950
Sequence
antisense
UGUU





strand







NR1H3-931-
Artificial
27 mer
UCAGAUAAGGAGCGCCGGUUACA
418


951
Sequence
antisense
CUGU





strand







NR1H3-932-
Artificial
27 mer
GUCAGUAAAGGAGCGCCGGUUAC
419


952
Sequence
antisense
ACUG





strand







NR1H3-933-
Artificial
27 mer
GGUCAUAAAAGGAGCGCCGGUU
420


953
Sequence
antisense
ACACU





strand







NR1H3-941-
Artificial
27 mer
UCGAAUCCGGUCAGAAAAGGAGC
421


961
Sequence
antisense
GCCG





strand







NR1H3-944-
Artificial
27 mer
GACUCUAAGCCGGUCAGAAAAGG
422


964
Sequence
antisense
AGCG





strand







NR1H3-945-
Artificial
27 mer
UGACUUGAAGCCGGUCAGAAAA
423


965
Sequence
antisense
GGAGC





strand







NR1H3-946-
Artificial
27 mer
GUGACUCGAAGCCGGUCAGAAAA
424


966
Sequence
antisense
GGAG





strand







NR1H3-947-
Artificial
27 mer
CGUGAUUCGAAGCCGGUCAGAAA
425


967
Sequence
antisense
AGGA





strand







NR1H3-949-
Artificial
27 mer
GGCGUUACUCGAAGCCGGUCAGA
426


969
Sequence
antisense
AAAG





strand







NR1H3-951-
Artificial
27 mer
AAGGCUUGACUCGAAGCCGGUCA
427


971
Sequence
antisense
GAAA





strand







NR1H3-952-
Artificial
27 mer
CAAGGUGUGACUCGAAGCCGGUC
428


972
Sequence
antisense
AGAA





strand







NR1H3-953-
Artificial
27 mer
CCAAGUCGUGACUCGAAGCCGGU
429


973
Sequence
antisense
CAGA





strand







NR1H3-1151-
Artificial
27 mer
CCGAGUUGUCUCCAGAAGCAUCA
430


1171
Sequence
antisense
CCUG





strand







NR1H3-1153-
Artificial
27 mer
CUCCGUGAUGUCUCCAGAAGCAU
431


1173
Sequence
antisense
CACC





strand







NR1H3-1154-
Artificial
27 mer
CCUCCUAGAUGUCUCCAGAAGCA
432


1174
Sequence
antisense
UCAC





strand







NR1H3-1155-
Artificial
27 mer
ACCUCUGAGAUGUCUCCAGAAGC
433


1175
Sequence
antisense
AUCA





strand







NR1H3-1156-
Artificial
27 mer
UACCUUCGAGAUGUCUCCAGAAG
434


1176
Sequence
antisense
CAUC





strand







NR1H3-1157-
Artificial
27 mer
GUACCUCCGAGAUGUCUCCAGAA
435


1177
Sequence
antisense
GCAU





strand







NR1H3-1158-
Artificial
27 mer
UGUACUUCCGAGAUGUCUCCAGA
436


1178
Sequence
antisense
AGCA





strand







NR1H3-1159-
Artificial
27 mer
UUGUAUCUCCGAGAUGUCUCCAG
437


1179
Sequence
antisense
AAGC





strand







NR1H3-1160-
Artificial
27 mer
GUUGUUCCUCCGAGAUGUCUCCA
438


1180
Sequence
antisense
GAAG





strand







NR1H3-1161-
Artificial
27 mer
GGUUGUACCUCCGAGAUGUCUCC
439


1181
Sequence
antisense
AGAA





strand







NR1H3-1162-
Artificial
27 mer
GGGUUUUACCUCCGAGAUGUCUC
440


1182
Sequence
antisense
CAGA





strand







NR1H3-1163-
Artificial
27 mer
AGGGUUGUACCUCCGAGAUGUCU
441


1183
Sequence
antisense
CCAG





strand







NR1H3-1164-
Artificial
27 mer
CAGGGUUGUACCUCCGAGAUGUC
442


1184
Sequence
antisense
UCCA





strand







NR1H3-1165-
Artificial
27 mer
CCAGGUUUGUACCUCCGAGAUGU
443


1185
Sequence
antisense
CUCC





strand







NR1H3-1166-
Artificial
27 mer
CCCAGUGUUGUACCUCCGAGAUG
444


1186
Sequence
antisense
UCUC





strand







NR1H3-1167-
Artificial
27 mer
UCCCAUGGUUGUACCUCCGAGAU
445


1187
Sequence
antisense
GUCU





strand







NR1H3-1169-
Artificial
27 mer
ACUCCUAGGGUUGUACCUCCGAG
446


1189
Sequence
antisense
AUGU





strand







NR1H3-1170-
Artificial
27 mer
CACUCUCAGGGUUGUACCUCCGA
447


1190
Sequence
antisense
GAUG





strand







NR1H3-1171-
Artificial
27 mer
UCACUUCCAGGGUUGUACCUCCG
448


1191
Sequence
antisense
AGAU





strand







NR1H3-1173-
Artificial
27 mer
UCUCAUUCCCAGGGUUGUACCUC
449


1193
Sequence
antisense
CGAG





strand







NR1H3-1175-
Artificial
27 mer
ACUCUUACUCCCAGGGUUGUACC
450


1195
Sequence
antisense
UCCG





strand







NR1H3-1176-
Artificial
27 mer
UACUCUCACUCCCAGGGUUGUAC
451


1196
Sequence
antisense
CUCC





strand







NR1H3-1177-
Artificial
27 mer
AUACUUUCACUCCCAGGGUUGUA
452


1197
Sequence
antisense
CCUC





strand







NR1H3-1178-
Artificial
27 mer
GAUACUCUCACUCCCAGGGUUGU
453


1198
Sequence
antisense
ACCU





strand







NR1H3-1179-
Artificial
27 mer
UGAUAUUCUCACUCCCAGGGUUG
454


1199
Sequence
antisense
UACC





strand







NR1H3-1180-
Artificial
27 mer
GUGAUUCUCUCACUCCCAGGGUU
455


1200
Sequence
antisense
GUAC





strand







NR1H3-1181-
Artificial
27 mer
GGUGAUACUCUCACUCCCAGGGU
456


1201
Sequence
antisense
UGUA





strand







NR1H3-1182-
Artificial
27 mer
AGGUGUUACUCUCACUCCCAGGG
457


1202
Sequence
antisense
UUGU





strand







NR1H3-1183-
Artificial
27 mer
AAGGUUAUACUCUCACUCCCAGG
458


1203
Sequence
antisense
GUUG





strand







NR1H3-1184-
Artificial
27 mer
GAAGGUGAUACUCUCACUCCCAG
459


1204
Sequence
antisense
GGUU





strand







NR1H3-1185-
Artificial
27 mer
GGAAGUUGAUACUCUCACUCCCA
460


1205
Sequence
antisense
GGGU





strand







NR1H3-1186-
Artificial
27 mer
AGGAAUGUGAUACUCUCACUCCC
461


1206
Sequence
antisense
AGGG





strand







NR1H3-1187-
Artificial
27 mer
GAGGAUGGUGAUACUCUCACUCC
462


1207
Sequence
antisense
CAGG





strand







NR1H3-1188-
Artificial
27 mer
UGAGGUAGGUGAUACUCUCACUC
463


1208
Sequence
antisense
CCAG





strand







NR1H3-1190-
Artificial
27 mer
CUUGAUGAAGGUGAUACUCUCAC
464


1210
Sequence
antisense
UCCC





strand







NR1H3-1191-
Artificial
27 mer
CCUUGUGGAAGGUGAUACUCUCA
465


1211
Sequence
antisense
CUCC





strand







NR1H3-1192-
Artificial
27 mer
UCCUUUAGGAAGGUGAUACUCUC
466


1212
Sequence
antisense
ACUC





strand







NR1H3-1193-
Artificial
27 mer
AUCCUUGAGGAAGGUGAUACUC
467


1213
Sequence
antisense
UCACU





strand







NR1H3-1194-
Artificial
27 mer
AAUCCUUGAGGAAGGUGAUACU
468


1214
Sequence
antisense
CUCAC





strand







NR1H3-1196-
Artificial
27 mer
GAAAUUCUUGAGGAAGGUGAUA
469


1216
Sequence
antisense
CUCUC





strand







NR1H3-1197-
Artificial
27 mer
UGAAAUCCUUGAGGAAGGUGAU
470


1217
Sequence
antisense
ACUCU





strand







NR1H3-1198-
Artificial
27 mer
CUGAAUUCCUUGAGGAAGGUGA
471


1218
Sequence
antisense
UACUC





strand







NR1H3-1199-
Artificial
27 mer
ACUGAUAUCCUUGAGGAAGGUG
472


1219
Sequence
antisense
AUACU





strand







NR1H3-1200-
Artificial
27 mer
AACUGUAAUCCUUGAGGAAGGU
473


1220
Sequence
antisense
GAUAC





strand







NR1H3-1203-
Artificial
27 mer
UAUAAUUGAAAUCCUUGAGGAA
474


1223
Sequence
antisense
GGUGA





strand







NR1H3-1204-
Artificial
27 mer
UUAUAUCUGAAAUCCUUGAGGA
475


1224
Sequence
antisense
AGGUG





strand







NR1H3-1207-
Artificial
27 mer
CGGUUUUAACUGAAAUCCUUGA
476


1227
Sequence
antisense
GGAAG





strand







NR1H3-1211-
Artificial
27 mer
UUCCCUGUUAUAACUGAAAUCCU
477


1231
Sequence
antisense
UGAG





strand







NR1H3-1212-
Artificial
27 mer
CUUCCUGGUUAUAACUGAAAUCC
478


1232
Sequence
antisense
UUGA





strand







NR1H3-1213-
Artificial
27 mer
UCUUCUCGGUUAUAACUGAAAUC
479


1233
Sequence
antisense
CUUG





strand







NR1H3-1214-
Artificial
27 mer
GUCUUUCCGGUUAUAACUGAAA
480


1234
Sequence
antisense
UCCUU





strand







NR1H3-1215-
Artificial
27 mer
AGUCUUCCCGGUUAUAACUGAAA
481


1235
Sequence
antisense
UCCU





strand







NR1H3-1216-
Artificial
27 mer
AAGUCUUCCCGGUUAUAACUGAA
482


1236
Sequence
antisense
AUCC





strand







NR1H3-1217-
Artificial
27 mer
AAAGUUUUCCCGGUUAUAACUG
483


1237
Sequence
antisense
AAAUC





strand







NR1H3-1218-
Artificial
27 mer
CAAAGUCUUCCCGGUUAUAACUG
484


1238
Sequence
antisense
AAAU





strand







NR1H3-1219-
Artificial
27 mer
GCAAAUUCUUCCCGGUUAUAACU
485


1239
Sequence
antisense
GAAA





strand







NR1H3-1220-
Artificial
27 mer
GGCAAUGUCUUCCCGGUUAUAAC
486


1240
Sequence
antisense
UGAA





strand







NR1H3-1222-
Artificial
27 mer
UUGGCUAAGUCUUCCCGGUUAUA
487


1242
Sequence
antisense
ACUG





strand







NR1H3-1223-
Artificial
27 mer
UUUGGUAAAGUCUUCCCGGUUA
488


1243
Sequence
antisense
UAACU





strand







NR1H3-1224-
Artificial
27 mer
CUUUGUCAAAGUCUUCCCGGUUA
489


1244
Sequence
antisense
UAAC





strand







NR1H3-1225-
Artificial
27 mer
GCUUUUGCAAAGUCUUCCCGGUU
490


1245
Sequence
antisense
AUAA





strand







NR1H3-1226-
Artificial
27 mer
UGCUUUGGCAAAGUCUUCCCGGU
491


1246
Sequence
antisense
UAUA





strand







NR1H3-1227-
Artificial
27 mer
CUGCUUUGGCAAAGUCUUCCCGG
492


1247
Sequence
antisense
UUAU





strand







NR1H3-1228-
Artificial
27 mer
CCUGCUUUGGCAAAGUCUUCCCG
493


1248
Sequence
antisense
GUUA





strand







NR1H3-1229-
Artificial
27 mer
CCCUGUUUUGGCAAAGUCUUCCC
494


1249
Sequence
antisense
GGUU





strand







NR1H3-1232-
Artificial
27 mer
CAGCCUUGCUUUGGCAAAGUCUU
495


1252
Sequence
antisense
CCCG





strand







NR1H3-1233-
Artificial
27 mer
GCAGCUCUGCUUUGGCAAAGUCU
496


1253
Sequence
antisense
UCCC





strand







NR1H3-1234-
Artificial
27 mer
UGCAGUCCUGCUUUGGCAAAGUC
497


1254
Sequence
antisense
UUCC





strand







NR1H3-1235-
Artificial
27 mer
UUGCAUCCCUGCUUUGGCAAAGU
498


1255
Sequence
antisense
CUUC





strand







NR1H3-1236-
Artificial
27 mer
CUUGCUGCCCUGCUUUGGCAAAG
499


1256
Sequence
antisense
UCUU





strand







NR1H3-1237-
Artificial
27 mer
ACUUGUAGCCCUGCUUUGGCAAA
500


1257
Sequence
antisense
GUCU





strand







NR1H3-1238-
Artificial
27 mer
CACUUUCAGCCCUGCUUUGGCAA
501


1258
Sequence
antisense
AGUC





strand







NR1H3-1241-
Artificial
27 mer
UUCCAUUUGCAGCCCUGCUUUGG
502


1261
Sequence
antisense
CAAA





strand







NR1H3-1242-
Artificial
27 mer
AUUCCUCUUGCAGCCCUGCUUUG
503


1262
Sequence
antisense
GCAA





strand







NR1H3-1243-
Artificial
27 mer
AAUUCUACUUGCAGCCCUGCUUU
504


1263
Sequence
antisense
GGCA





strand







NR1H3-1244-
Artificial
27 mer
GAAUUUCACUUGCAGCCCUGCUU
505


1264
Sequence
antisense
UGGC





strand







NR1H3-1245-
Artificial
27 mer
UGAAUUCCACUUGCAGCCCUGCU
506


1265
Sequence
antisense
UUGG





strand







NR1H3-1246-
Artificial
27 mer
AUGAAUUCCACUUGCAGCCCUGC
507


1266
Sequence
antisense
UUUG





strand







NR1H3-1247-
Artificial
27 mer
GAUGAUUUCCACUUGCAGCCCUG
508


1267
Sequence
antisense
CUUU





strand







NR1H3-1248-
Artificial
27 mer
UGAUGUAUUCCACUUGCAGCCCU
509


1268
Sequence
antisense
GCUU





strand







NR1H3-1250-
Artificial
27 mer
GUUGAUGAAUUCCACUUGCAGCC
510


1270
Sequence
antisense
CUGC





strand







NR1H3-1251-
Artificial
27 mer
GGUUGUUGAAUUCCACUUGCAGC
511


1271
Sequence
antisense
CCUG





strand







NR1H3-1252-
Artificial
27 mer
GGGUUUAUGAAUUCCACUUGCA
512


1272
Sequence
antisense
GCCCU





strand







NR1H3-1253-
Artificial
27 mer
GGGGUUGAUGAAUUCCACUUGC
513


1273
Sequence
antisense
AGCCC





strand







NR1H3-1256-
Artificial
27 mer
GAUGGUGUUGAUGAAUUCCACU
514


1276
Sequence
antisense
UGCAG





strand







NR1H3-1258-
Artificial
27 mer
AAGAUUGGGUUGAUGAAUUCCA
515


1278
Sequence
antisense
CUUGC





strand







NR1H3-1259-
Artificial
27 mer
GAAGAUGGGGUUGAUGAAUUCC
516


1279
Sequence
antisense
ACUUG





strand







NR1H3-1261-
Artificial
27 mer
UCGAAUAUGGGGUUGAUGAAUU
517


1281
Sequence
antisense
CCACU





strand







NR1H3-1262-
Artificial
27 mer
CUCGAUGAUGGGGUUGAUGAAU
518


1282
Sequence
antisense
UCCAC





strand







NR1H3-1265-
Artificial
27 mer
GAACUUGAAGAUGGGGUUGAUG
519


1285
Sequence
antisense
AAUUC





strand







NR1H3-1266-
Artificial
27 mer
AGAACUCGAAGAUGGGGUUGAU
520


1286
Sequence
antisense
GAAUU





strand







NR1H3-1267-
Artificial
27 mer
GAGAAUUCGAAGAUGGGGUUGA
521


1287
Sequence
antisense
UGAAU





strand







NR1H3-1268-
Artificial
27 mer
GGAGAUCUCGAAGAUGGGGUUG
522


1288
Sequence
antisense
AUGAA





strand







NR1H3-1269-
Artificial
27 mer
UGGAGUACUCGAAGAUGGGGUU
523


1289
Sequence
antisense
GAUGA





strand







NR1H3-1270-
Artificial
27 mer
CUGGAUAACUCGAAGAUGGGGU
524


1290
Sequence
antisense
UGAUG





strand







NR1H3-1271-
Artificial
27 mer
CCUGGUGAACUCGAAGAUGGGG
525


1291
Sequence
antisense
UUGAU





strand







NR1H3-1272-
Artificial
27 mer
CCCUGUAGAACUCGAAGAUGGGG
526


1292
Sequence
antisense
UUGA





strand







NR1H3-1273-
Artificial
27 mer
GCCCUUGAGAACUCGAAGAUGGG
527


1293
Sequence
antisense
GUUG





strand







NR1H3-1275-
Artificial
27 mer
UGGCCUUGGAGAACUCGAAGAU
528


1295
Sequence
antisense
GGGGU





strand







NR1H3-1276-
Artificial
27 mer
AUGGCUCUGGAGAACUCGAAGA
529


1296
Sequence
antisense
UGGGG





strand







NR1H3-1277-
Artificial
27 mer
CAUGGUCCUGGAGAACUCGAAGA
530


1297
Sequence
antisense
UGGG





strand







NR1H3-1278-
Artificial
27 mer
UCAUGUCCCUGGAGAACUCGAAG
531


1298
Sequence
antisense
AUGG





strand







NR1H3-1279-
Artificial
27 mer
UUCAUUGCCCUGGAGAACUCGAA
532


1299
Sequence
antisense
GAUG





strand







NR1H3-1280-
Artificial
27 mer
AUUCAUGGCCCUGGAGAACUCGA
533


1300
Sequence
antisense
AGAU





strand







NR1H3-1281-
Artificial
27 mer
CAUUCUUGGCCCUGGAGAACUCG
534


1301
Sequence
antisense
AAGA





strand







NR1H3-1282-
Artificial
27 mer
UCAUUUAUGGCCCUGGAGAACUC
535


1302
Sequence
antisense
GAAG





strand







NR1H3-1283-
Artificial
27 mer
CUCAUUCAUGGCCCUGGAGAACU
536


1303
Sequence
antisense
CGAA





strand







NR1H3-1284-
Artificial
27 mer
GCUCAUUCAUGGCCCUGGAGAAC
537


1304
Sequence
antisense
UCGA





strand







NR1H3-1285-
Artificial
27 mer
AGCUCUUUCAUGGCCCUGGAGAA
538


1305
Sequence
antisense
CUCG





strand







NR1H3-1286-
Artificial
27 mer
CAGCUUAUUCAUGGCCCUGGAGA
539


1306
Sequence
antisense
ACUC





strand







NR1H3-1288-
Artificial
27 mer
UGCAGUUCAUUCAUGGCCCUGGA
540


1308
Sequence
antisense
GAAC





strand







NR1H3-1289-
Artificial
27 mer
UUGCAUCUCAUUCAUGGCCCUGG
541


1309
Sequence
antisense
AGAA





strand







NR1H3-1290-
Artificial
27 mer
GUUGCUGCUCAUUCAUGGCCCUG
542


1310
Sequence
antisense
GAGA





strand







NR1H3-1291-
Artificial
27 mer
AGUUGUAGCUCAUUCAUGGCCCU
543


1311
Sequence
antisense
GGAG





strand







NR1H3-1292-
Artificial
27 mer
GAGUUUCAGCUCAUUCAUGGCCC
544


1312
Sequence
antisense
UGGA





strand







NR1H3-1293-
Artificial
27 mer
UGAGUUGCAGCUCAUUCAUGGCC
545


1313
Sequence
antisense
CUGG





strand







NR1H3-1294-
Artificial
27 mer
UUGAGUUGCAGCUCAUUCAUGGC
546


1314
Sequence
antisense
CCUG





strand







NR1H3-1295-
Artificial
27 mer
AUUGAUUUGCAGCUCAUUCAUG
547


1315
Sequence
antisense
GCCCU





strand







NR1H3-1296-
Artificial
27 mer
CAUUGUGUUGCAGCUCAUUCAUG
548


1316
Sequence
antisense
GCCC





strand







NR1H3-1297-
Artificial
27 mer
UCAUUUAGUUGCAGCUCAUUCAU
549


1317
Sequence
antisense
GGCC





strand







NR1H3-1338-
Artificial
27 mer
CAGAGUAGAUGCUGAUAGCAAU
550


1358
Sequence
antisense
GAGCA





strand







NR1H3-1339-
Artificial
27 mer
GCAGAUAAGAUGCUGAUAGCAA
551


1359
Sequence
antisense
UGAGC





strand







NR1H3-1340-
Artificial
27 mer
UGCAGUGAAGAUGCUGAUAGCA
552


1360
Sequence
antisense
AUGAG





strand







NR1H3-1341-
Artificial
27 mer
CUGCAUAGAAGAUGCUGAUAGC
553


1361
Sequence
antisense
AAUGA





strand







NR1H3-1342-
Artificial
27 mer
UCUGCUGAGAAGAUGCUGAUAG
554


1362
Sequence
antisense
CAAUG





strand







NR1H3-1343-
Artificial
27 mer
GUCUGUAGAGAAGAUGCUGAUA
555


1363
Sequence
antisense
GCAAU





strand







NR1H3-1344-
Artificial
27 mer
GGUCUUCAGAGAAGAUGCUGAU
556


1364
Sequence
antisense
AGCAA





strand







NR1H3-1345-
Artificial
27 mer
CGGUCUGCAGAGAAGAUGCUGA
557


1365
Sequence
antisense
UAGCA





strand







NR1H3-1346-
Artificial
27 mer
CCGGUUUGCAGAGAAGAUGCUG
558


1366
Sequence
antisense
AUAGC





strand







NR1H3-1347-
Artificial
27 mer
GCCGGUCUGCAGAGAAGAUGCUG
559


1367
Sequence
antisense
AUAG





strand







NR1H3-1377-
Artificial
27 mer
UCUCUUCCUGGAGCUGGUCCUGC
560


1443
Sequence
antisense
ACGU





strand







NR1H3-1379-
Artificial
27 mer
CCUCUUUACCUGGAGCUGGUCCU
561


1445
Sequence
antisense
GCAC





strand







NR1H3-1383-
Artificial
27 mer
GCAGCUUCUCUACCUGGAGCUGG
562


1449
Sequence
antisense
UCCU





strand







NR1H3-1384-
Artificial
27 mer
UGCAGUCUCUCUACCUGGAGCUG
563


1450
Sequence
antisense
GUCC





strand







NR1H3-1385-
Artificial
27 mer
CUGCAUCCUCUCUACCUGGAGCU
564


1451
Sequence
antisense
GGUC





strand







NR1H3-1387-
Artificial
27 mer
UGCUGUAGCCUCUCUACCUGGAG
565


1453
Sequence
antisense
CUGG





strand







NR1H3-1388-
Artificial
27 mer
GUGCUUCAGCCUCUCUACCUGGA
566


1454
Sequence
antisense
GCUG





strand







NR1H3-1391-
Artificial
27 mer
UGUGUUCUGCAGCCUCUCUACCU
567


1457
Sequence
antisense
GGAG





strand







NR1H3-1393-
Artificial
27 mer
UAUGUUUGCUGCAGCCUCUCUAC
568


1459
Sequence
antisense
CUGG





strand







NR1H3-1394-
Artificial
27 mer
AUAUGUGUGCUGCAGCCUCUCUA
569


1460
Sequence
antisense
CCUG





strand







NR1H3-1395-
Artificial
27 mer
CAUAUUUGUGCUGCAGCCUCUCU
570


1461
Sequence
antisense
ACCU





strand







NR1H3-1396-
Artificial
27 mer
ACAUAUGUGUGCUGCAGCCUCUC
571


1462
Sequence
antisense
UACC





strand







NR1H3-1397-
Artificial
27 mer
CACAUUUGUGUGCUGCAGCCUCU
572


1463
Sequence
antisense
CUAC





strand







NR1H3-1398-
Artificial
27 mer
CCACAUAUGUGUGCUGCAGCCUC
573


1464
Sequence
antisense
UCUA





strand







NR1H3-1399-
Artificial
27 mer
UCCACUUAUGUGUGCUGCAGCCU
574


1465
Sequence
antisense
CUCU





strand







NR1H3-1400-
Artificial
27 mer
UUCCAUAUAUGUGUGCUGCAGCC
575


1466
Sequence
antisense
UCUC





strand







NR1H3-1401-
Artificial
27 mer
CUUCCUCAUAUGUGUGCUGCAGC
576


1467
Sequence
antisense
CUCU





strand







NR1H3-1402-
Artificial
27 mer
GCUUCUACAUAUGUGUGCUGCAG
577


1468
Sequence
antisense
CCUC





strand







NR1H3-1403-
Artificial
27 mer
GGCUUUCACAUAUGUGUGCUGCA
578


1469
Sequence
antisense
GCCU





strand







NR1H3-1404-
Artificial
27 mer
GGGCUUCCACAUAUGUGUGCUGC
579


1470
Sequence
antisense
AGCC





strand







NR1H3-1406-
Artificial
27 mer
CAGGGUUUCCACAUAUGUGUGCU
580


1472
Sequence
antisense
GCAG





strand







NR1H3-1407-
Artificial
27 mer
GCAGGUCUUCCACAUAUGUGUGC
581


1473
Sequence
antisense
UGCA





strand







NR1H3-1408-
Artificial
27 mer
UGCAGUGCUUCCACAUAUGUGUG
582


1474
Sequence
antisense
CUGC





strand







NR1H3-1410-
Artificial
27 mer
CAUGCUGGGCUUCCACAUAUGUG
583


1476
Sequence
antisense
UGCU





strand







NR1H3-1411-
Artificial
27 mer
GCAUGUAGGGCUUCCACAUAUGU
584


1477
Sequence
antisense
GUGC





strand







NR1H3-1412-
Artificial
27 mer
GGCAUUCAGGGCUUCCACAUAUG
585


1478
Sequence
antisense
UGUG





strand







NR1H3-1413-
Artificial
27 mer
AGGCAUGCAGGGCUUCCACAUAU
586


1479
Sequence
antisense
GUGU





strand







NR1H3-1414-
Artificial
27 mer
UAGGCUUGCAGGGCUUCCACAUA
587


1480
Sequence
antisense
UGUG





strand







NR1H3-1415-
Artificial
27 mer
GUAGGUAUGCAGGGCUUCCACAU
588


1481
Sequence
antisense
AUGU





strand







NR1H3-1416-
Artificial
27 mer
CGUAGUCAUGCAGGGCUUCCACA
589


1482
Sequence
antisense
UAUG





strand







NR1H3-1417-
Artificial
27 mer
ACGUAUGCAUGCAGGGCUUCCAC
590


1483
Sequence
antisense
AUAU





strand







NR1H3-1418-
Artificial
27 mer
GACGUUGGCAUGCAGGGCUUCCA
591


1484
Sequence
antisense
CAUA





strand







NR1H3-1419-
Artificial
27 mer
AGACGUAGGCAUGCAGGGCUUCC
592


1485
Sequence
antisense
ACAU





strand







NR1H3-1420-
Artificial
27 mer
GAGACUUAGGCAUGCAGGGCUUC
593


1486
Sequence
antisense
CACA





strand







NR1H3-1421-
Artificial
27 mer
GGAGAUGUAGGCAUGCAGGGCU
594


1487
Sequence
antisense
UCCAC





strand







NR1H3-1422-
Artificial
27 mer
UGGAGUCGUAGGCAUGCAGGGC
595


1488
Sequence
antisense
UUCCA





strand







NR1H3-1423-
Artificial
27 mer
AUGGAUACGUAGGCAUGCAGGG
596


1489
Sequence
antisense
CUUCC





strand







NR1H3-1424-
Artificial
27 mer
GAUGGUGACGUAGGCAUGCAGG
597


1490
Sequence
antisense
GCUUC





strand







NR1H3-1425-
Artificial
27 mer
GGAUGUAGACGUAGGCAUGCAG
598


1491
Sequence
antisense
GGCUU





strand







NR1H3-1426-
Artificial
27 mer
UGGAUUGAGACGUAGGCAUGCA
599


1492
Sequence
antisense
GGGCU





strand







NR1H3-1427-
Artificial
27 mer
GUGGAUGGAGACGUAGGCAUGC
600


1493
Sequence
antisense
AGGGC





strand







NR1H3-1428-
Artificial
27 mer
GGUGGUUGGAGACGUAGGCAUG
601


1494
Sequence
antisense
CAGGG





strand







NR1H3-1429-
Artificial
27 mer
UGGUGUAUGGAGACGUAGGCAU
602


1495
Sequence
antisense
GCAGG





strand







NR1H3-1430-
Artificial
27 mer
AUGGUUGAUGGAGACGUAGGCA
603


1496
Sequence
antisense
UGCAG





strand







NR1H3-1431-
Artificial
27 mer
GAUGGUGGAUGGAGACGUAGGC
604


1497
Sequence
antisense
AUGCA





strand







NR1H3-1432-
Artificial
27 mer
GGAUGUUGGAUGGAGACGUAGG
605


1498
Sequence
antisense
CAUGC





strand







NR1H3-1433-
Artificial
27 mer
GGGAUUGUGGAUGGAGACGUAG
606


1499
Sequence
antisense
GCAUG





strand







NR1H3-1434-
Artificial
27 mer
GGGGAUGGUGGAUGGAGACGUA
607


1500
Sequence
antisense
GGCAU





strand







NR1H3-1435-
Artificial
27 mer
UGGGGUUGGUGGAUGGAGACGU
608


1501
Sequence
antisense
AGGCA





strand







NR1H3-1436-
Artificial
27 mer
AUGGGUAUGGUGGAUGGAGACG
609


1502
Sequence
antisense
UAGGC





strand







NR1H3-1437-
Artificial
27 mer
CAUGGUGAUGGUGGAUGGAGAC
610


1503
Sequence
antisense
GUAGG





strand







NR1H3-1438-
Artificial
27 mer
UCAUGUGGAUGGUGGAUGGAGA
611


1504
Sequence
antisense
CGUAG





strand







NR1H3-1439-
Artificial
27 mer
GUCAUUGGGAUGGUGGAUGGAG
612


1505
Sequence
antisense
ACGUA





strand







NR1H3-1440-
Artificial
27 mer
GGUCAUGGGGAUGGUGGAUGGA
613


1506
Sequence
antisense
GACGU





strand







NR1H3-1442-
Artificial
27 mer
UCGGUUAUGGGGAUGGUGGAUG
614


1508
Sequence
antisense
GAGAC





strand







NR1H3-1443-
Artificial
27 mer
GUCGGUCAUGGGGAUGGUGGAU
615


1509
Sequence
antisense
GGAGA





strand







NR1H3-1444-
Artificial
27 mer
AGUCGUUCAUGGGGAUGGUGGA
616


1510
Sequence
antisense
UGGAG





strand







NR1H3-1445-
Artificial
27 mer
CAGUCUGUCAUGGGGAUGGUGG
617


1511
Sequence
antisense
AUGGA





strand







NR1H3-1446-
Artificial
27 mer
UCAGUUGGUCAUGGGGAUGGUG
618


1512
Sequence
antisense
GAUGG





strand







NR1H3-1447-
Artificial
27 mer
AUCAGUCGGUCAUGGGGAUGGU
619


1513
Sequence
antisense
GGAUG





strand







NR1H3-1448-
Artificial
27 mer
CAUCAUUCGGUCAUGGGGAUGG
620


1514
Sequence
antisense
UGGAU





strand







NR1H3-1449-
Artificial
27 mer
ACAUCUGUCGGUCAUGGGGAUG
621


1515
Sequence
antisense
GUGGA





strand







NR1H3-1450-
Artificial
27 mer
AACAUUAGUCGGUCAUGGGGAU
622


1516
Sequence
antisense
GGUGG





strand







NR1H3-1451-
Artificial
27 mer
GAACAUCAGUCGGUCAUGGGGA
623


1517
Sequence
antisense
UGGUG





strand







NR1H3-1452-
Artificial
27 mer
GGAACUUCAGUCGGUCAUGGGG
624


1518
Sequence
antisense
AUGGU





strand







NR1H3-1453-
Artificial
27 mer
GGGAAUAUCAGUCGGUCAUGGG
625


1519
Sequence
antisense
GAUGG





strand







NR1H3-1454-
Artificial
27 mer
UGGGAUCAUCAGUCGGUCAUGG
626


1520
Sequence
antisense
GGAUG





strand







NR1H3-1455-
Artificial
27 mer
GUGGGUACAUCAGUCGGUCAUG
627


1521
Sequence
antisense
GGGAU





strand







NR1H3-1456-
Artificial
27 mer
CGUGGUAACAUCAGUCGGUCAUG
628


1522
Sequence
antisense
GGGA





strand







NR1H3-1457-
Artificial
27 mer
CCGUGUGAACAUCAGUCGGUCAU
629


1523
Sequence
antisense
GGGG





strand







NR1H3-1459-
Artificial
27 mer
AUCCGUGGGAACAUCAGUCGGUC
630


1525
Sequence
antisense
AUGG





strand







NR1H3-1460-
Artificial
27 mer
CAUCCUUGGGAACAUCAGUCGGU
631


1526
Sequence
antisense
CAUG





strand







NR1H3-1461-
Artificial
27 mer
GCAUCUGUGGGAACAUCAGUCGG
632


1527
Sequence
antisense
UCAU





strand







NR1H3-1462-
Artificial
27 mer
AGCAUUCGUGGGAACAUCAGUCG
633


1528
Sequence
antisense
GUCA





strand







NR1H3-1463-
Artificial
27 mer
UAGCAUCCGUGGGAACAUCAGUC
634


1529
Sequence
antisense
GGUC





strand







NR1H3-1465-
Artificial
27 mer
AUUAGUAUCCGUGGGAACAUCA
635


1531
Sequence
antisense
GUCGG





strand







NR1H3-1466-
Artificial
27 mer
CAUUAUCAUCCGUGGGAACAUCA
636


1532
Sequence
antisense
GUCG





strand







NR1H3-1468-
Artificial
27 mer
UUCAUUAGCAUCCGUGGGAACAU
637


1534
Sequence
antisense
CAGU





strand







NR1H3-1469-
Artificial
27 mer
UUUCAUUAGCAUCCGUGGGAACA
638


1535
Sequence
antisense
UCAG





strand







NR1H3-1471-
Artificial
27 mer
AGUUUUAUUAGCAUCCGUGGGA
639


1537
Sequence
antisense
ACAUC





strand







NR1H3-1472-
Artificial
27 mer
CAGUUUCAUUAGCAUCCGUGGGA
640


1538
Sequence
antisense
ACAU





strand







NR1H3-1473-
Artificial
27 mer
CCAGUUUCAUUAGCAUCCGUGGG
641


1539
Sequence
antisense
AACA





strand







NR1H3-1474-
Artificial
27 mer
ACCAGUUUCAUUAGCAUCCGUGG
642


1540
Sequence
antisense
GAAC





strand







NR1H3-1475-
Artificial
27 mer
CACCAUUUUCAUUAGCAUCCGUG
643


1541
Sequence
antisense
GGAA





strand







NR1H3-1476-
Artificial
27 mer
UCACCUGUUUCAUUAGCAUCCGU
644


1542
Sequence
antisense
GGGA





strand







NR1H3-1477-
Artificial
27 mer
CUCACUAGUUUCAUUAGCAUCCG
645


1543
Sequence
antisense
UGGG





strand







NR1H3-1478-
Artificial
27 mer
GCUCAUCAGUUUCAUUAGCAUCC
646


1544
Sequence
antisense
GUGG





strand







NR1H3-1479-
Artificial
27 mer
GGCUCUCCAGUUUCAUUAGCAUC
647


1545
Sequence
antisense
CGUG





strand







NR1H3-1480-
Artificial
27 mer
AGGCUUACCAGUUUCAUUAGCAU
648


1546
Sequence
antisense
CCGU





strand







NR1H3-1481-
Artificial
27 mer
GAGGCUCACCAGUUUCAUUAGCA
649


1547
Sequence
antisense
UCCG





strand







NR1H3-1483-
Artificial
27 mer
CGGAGUCUCACCAGUUUCAUUAG
650


1549
Sequence
antisense
CAUC





strand







NR1H3-1484-
Artificial
27 mer
CCGGAUGCUCACCAGUUUCAUUA
651


1550
Sequence
antisense
GCAU





strand







NR1H3-1485-
Artificial
27 mer
UCCGGUGGCUCACCAGUUUCAUU
652


1551
Sequence
antisense
AGCA





strand







NR1H3-1486-
Artificial
27 mer
GUCCGUAGGCUCACCAGUUUCAU
653


1552
Sequence
antisense
UAGC





strand







NR1H3-1487-
Artificial
27 mer
GGUCCUGAGGCUCACCAGUUUCA
654


1553
Sequence
antisense
UUAG





strand







NR1H3-1488-
Artificial
27 mer
GGGUCUGGAGGCUCACCAGUUUC
655


1554
Sequence
antisense
AUUA





strand







NR1H3-1489-
Artificial
27 mer
AGGGUUCGGAGGCUCACCAGUUU
656


1555
Sequence
antisense
CAUU





strand







NR1H3-1491-
Artificial
27 mer
UCAGGUUCCGGAGGCUCACCAGU
657


1557
Sequence
antisense
UUCA





strand







NR1H3-1492-
Artificial
27 mer
CUCAGUGUCCGGAGGCUCACCAG
658


1558
Sequence
antisense
UUUC





strand







NR1H3-1494-
Artificial
27 mer
UGCUCUGGGUCCGGAGGCUCACC
659


1560
Sequence
antisense
AGUU





strand







NR1H3-1505-
Artificial
27 mer
UGAGUUGACGCUGCUCAGGGUCC
660


1571
Sequence
antisense
GGAG





strand







NR1H3-1507-
Artificial
27 mer
UCUGAUUGGACGCUGCUCAGGGU
661


1573
Sequence
antisense
CCGG





strand







NR1H3-1508-
Artificial
27 mer
CUCUGUGUGGACGCUGCUCAGGG
662


1574
Sequence
antisense
UCCG





strand







NR1H3-1509-
Artificial
27 mer
GCUCUUAGUGGACGCUGCUCAGG
663


1575
Sequence
antisense
GUCC





strand







NR1H3-1510-
Artificial
27 mer
UGCUCUGAGUGGACGCUGCUCAG
664


1576
Sequence
antisense
GGUC





strand







NR1H3-1511-
Artificial
27 mer
UUGCUUUGAGUGGACGCUGCUCA
665


1577
Sequence
antisense
GGGU





strand







NR1H3-1512-
Artificial
27 mer
CUUGCUCUGAGUGGACGCUGCUC
666


1578
Sequence
antisense
AGGG





strand







NR1H3-1513-
Artificial
27 mer
ACUUGUUCUGAGUGGACGCUGCU
667


1579
Sequence
antisense
CAGG





strand







NR1H3-1514-
Artificial
27 mer
CACUUUCUCUGAGUGGACGCUGC
668


1580
Sequence
antisense
UCAG





strand







NR1H3-1515-
Artificial
27 mer
ACACUUGCUCUGAGUGGACGCUG
669


1581
Sequence
antisense
CUCA





strand







NR1H3-1516-
Artificial
27 mer
AACACUUGCUCUGAGUGGACGCU
670


1582
Sequence
antisense
GCUC





strand







NR1H3-1517-
Artificial
27 mer
AAACAUUUGCUCUGAGUGGACGC
671


1583
Sequence
antisense
UGCU





strand







NR1H3-1518-
Artificial
27 mer
CAAACUCUUGCUCUGAGUGGACG
672


1584
Sequence
antisense
CUGC





strand







NR1H3-1519-
Artificial
27 mer
GCAAAUACUUGCUCUGAGUGGAC
673


1585
Sequence
antisense
GCUG





strand







NR1H3-1520-
Artificial
27 mer
UGCAAUCACUUGCUCUGAGUGGA
674


1586
Sequence
antisense
CGCU





strand







NR1H3-1521-
Artificial
27 mer
GUGCAUACACUUGCUCUGAGUGG
675


1587
Sequence
antisense
ACGC





strand







NR1H3-1522-
Artificial
27 mer
AGUGCUAACACUUGCUCUGAGUG
676


1588
Sequence
antisense
GACG





strand







NR1H3-1523-
Artificial
27 mer
CAGUGUAAACACUUGCUCUGAGU
677


1589
Sequence
antisense
GGAC





strand







NR1H3-1525-
Artificial
27 mer
CGCAGUGCAAACACUUGCUCUGA
678


1591
Sequence
antisense
GUGG





strand







NR1H3-1526-
Artificial
27 mer
ACGCAUUGCAAACACUUGCUCUG
679


1592
Sequence
antisense
AGUG





strand







NR1H3-1527-
Artificial
27 mer
GACGCUGUGCAAACACUUGCUCU
680


1593
Sequence
antisense
GAGU





strand







NR1H3-1528-
Artificial
27 mer
AGACGUAGUGCAAACACUUGCUC
681


1594
Sequence
antisense
UGAG





strand







NR1H3-1529-
Artificial
27 mer
CAGACUCAGUGCAAACACUUGCU
682


1595
Sequence
antisense
CUGA





strand







NR1H3-1530-
Artificial
27 mer
GCAGAUGCAGUGCAAACACUUGC
683


1596
Sequence
antisense
UCUG





strand







NR1H3-1531-
Artificial
27 mer
UGCAGUCGCAGUGCAAACACUUG
684


1597
Sequence
antisense
CUCU





strand







NR1H3-1532-
Artificial
27 mer
CUGCAUACGCAGUGCAAACACUU
685


1598
Sequence
antisense
GCUC





strand







NR1H3-1533-
Artificial
27 mer
CCUGCUGACGCAGUGCAAACACU
686


1599
Sequence
antisense
UGCU





strand







NR1H3-1534-
Artificial
27 mer
UCCUGUAGACGCAGUGCAAACAC
687


1600
Sequence
antisense
UUGC





strand







NR1H3-1535-
Artificial
27 mer
GUCCUUCAGACGCAGUGCAAACA
688


1601
Sequence
antisense
CUUG





strand







NR1H3-1536-
Artificial
27 mer
UGUCCUGCAGACGCAGUGCAAAC
689


1602
Sequence
antisense
ACUU





strand







NR1H3-1537-
Artificial
27 mer
UUGUCUUGCAGACGCAGUGCAAA
690


1603
Sequence
antisense
CACU





strand







NR1H3-1538-
Artificial
27 mer
UUUGUUCUGCAGACGCAGUGCAA
691


1604
Sequence
antisense
ACAC





strand







NR1H3-1539-
Artificial
27 mer
UUUUGUCCUGCAGACGCAGUGCA
692


1605
Sequence
antisense
AACA





strand







NR1H3-1540-
Artificial
27 mer
UUUUUUUCCUGCAGACGCAGUGC
693


1606
Sequence
antisense
AAAC





strand







NR1H3-1541-
Artificial
27 mer
CUUUUUGUCCUGCAGACGCAGUG
694


1607
Sequence
antisense
CAAA





strand







NR1H3-1542-
Artificial
27 mer
GCUUUUUGUCCUGCAGACGCAGU
695


1608
Sequence
antisense
GCAA





strand







NR1H3-1543-
Artificial
27 mer
AGCUUUUUGUCCUGCAGACGCAG
696


1609
Sequence
antisense
UGCA





strand







NR1H3-1544-
Artificial
27 mer
GAGCUUUUUGUCCUGCAGACGCA
697


1610
Sequence
antisense
GUGC





strand







NR1H3-1545-
Artificial
27 mer
GGAGCUUUUUGUCCUGCAGACGC
698


1611
Sequence
antisense
AGUG





strand







NR1H3-1546-
Artificial
27 mer
GGGAGUUUUUUGUCCUGCAGAC
699


1612
Sequence
antisense
GCAGU





strand







NR1H3-1547-
Artificial
27 mer
UGGGAUCUUUUUGUCCUGCAGAC
700


1613
Sequence
antisense
GCAG





strand







NR1H3-1548-
Artificial
27 mer
GUGGGUGCUUUUUGUCCUGCAG
701


1614
Sequence
antisense
ACGCA





strand







NR1H3-1549-
Artificial
27 mer
GGUGGUAGCUUUUUGUCCUGCA
702


1615
Sequence
antisense
GACGC





strand







NR1H3-1550-
Artificial
27 mer
CGGUGUGAGCUUUUUGUCCUGCA
703


1616
Sequence
antisense
GACG





strand







NR1H3-1551-
Artificial
27 mer
GCGGUUGGAGCUUUUUGUCCUGC
704


1617
Sequence
antisense
AGAC





strand







NR1H3-1553-
Artificial
27 mer
CAGCGUUGGGAGCUUUUUGUCCU
705


1619
Sequence
antisense
GCAG





strand







NR1H3-1554-
Artificial
27 mer
GCAGCUGUGGGAGCUUUUUGUCC
706


1620
Sequence
antisense
UGCA





strand







NR1H3-1555-
Artificial
27 mer
AGCAGUGGUGGGAGCUUUUUGU
707


1621
Sequence
antisense
CCUGC





strand







NR1H3-1556-
Artificial
27 mer
GAGCAUCGGUGGGAGCUUUUUG
708


1622
Sequence
antisense
UCCUG





strand







NR1H3-1558-
Artificial
27 mer
GAGAGUAGCGGUGGGAGCUUUU
709


1624
Sequence
antisense
UGUCC





strand







NR1H3-1559-
Artificial
27 mer
AGAGAUCAGCGGUGGGAGCUUU
710


1625
Sequence
antisense
UUGUC





strand







NR1H3-1560-
Artificial
27 mer
CAGAGUGCAGCGGUGGGAGCUU
711


1626
Sequence
antisense
UUUGU





strand







NR1H3-1561-
Artificial
27 mer
UCAGAUAGCAGCGGUGGGAGCU
712


1627
Sequence
antisense
UUUUG





strand







NR1H3-1562-
Artificial
27 mer
CUCAGUGAGCAGCGGUGGGAGCU
713


1628
Sequence
antisense
UUUU





strand







NR1H3-1563-
Artificial
27 mer
UCUCAUAGAGCAGCGGUGGGAGC
714


1629
Sequence
antisense
UUUU





strand







NR1H3-1564-
Artificial
27 mer
AUCUCUGAGAGCAGCGGUGGGA
715


1630
Sequence
antisense
GCUUU





strand







NR1H3-1565-
Artificial
27 mer
GAUCUUAGAGAGCAGCGGUGGG
716


1631
Sequence
antisense
AGCUU





strand







NR1H3-1567-
Artificial
27 mer
CAGAUUUCAGAGAGCAGCGGUG
717


1633
Sequence
antisense
GGAGC





strand







NR1H3-1569-
Artificial
27 mer
CCCAGUUCUCAGAGAGCAGCGGU
718


1635
Sequence
antisense
GGGA





strand







NR1H3-1570-
Artificial
27 mer
UCCCAUAUCUCAGAGAGCAGCGG
719


1636
Sequence
antisense
UGGG





strand







NR1H3-1572-
Artificial
27 mer
CAUCCUAGAUCUCAGAGAGCAGC
720


1638
Sequence
antisense
GGUG





strand







NR1H3-1573-
Artificial
27 mer
ACAUCUCAGAUCUCAGAGAGCAG
721


1639
Sequence
antisense
CGGU





strand







NR1H3-1574-
Artificial
27 mer
CACAUUCCAGAUCUCAGAGAGCA
722


1640
Sequence
antisense
GCGG





strand







NR1H3-1577-
Artificial
27 mer
GUGCAUAUCCCAGAUCUCAGAGA
723


1643
Sequence
antisense
GCAG





strand







NR1H3-1579-
Artificial
27 mer
UCGUGUACAUCCCAGAUCUCAGA
724


1645
Sequence
antisense
GAGC





strand







NR1H3-1580-
Artificial
27 mer
UUCGUUCACAUCCCAGAUCUCAG
725


1646
Sequence
antisense
AGAG





strand







NR1H3-1581-
Artificial
27 mer
AUUCGUGCACAUCCCAGAUCUCA
726


1647
Sequence
antisense
GAGA





strand







NR1H3-1582-
Artificial
27 mer
CAUUCUUGCACAUCCCAGAUCUC
727


1648
Sequence
antisense
AGAG





strand







NR1H3-1583-
Artificial
27 mer
UCAUUUGUGCACAUCCCAGAUCU
728


1649
Sequence
antisense
CAGA





strand







NR1H3-1584-
Artificial
27 mer
GUCAUUCGUGCACAUCCCAGAUC
729


1650
Sequence
antisense
UCAG





strand







NR1H3-1585-
Artificial
27 mer
AGUCAUUCGUGCACAUCCCAGAU
730


1651
Sequence
antisense
CUCA





strand







NR1H3-1586-
Artificial
27 mer
CAGUCUUUCGUGCACAUCCCAGA
731


1652
Sequence
antisense
UCUC





strand







NR1H3-1587-
Artificial
27 mer
ACAGUUAUUCGUGCACAUCCCAG
732


1653
Sequence
antisense
AUCU





strand







NR1H3-1588-
Artificial
27 mer
AACAGUCAUUCGUGCACAUCCCA
733


1654
Sequence
antisense
GAUC





strand







NR1H3-1589-
Artificial
27 mer
GAACAUUCAUUCGUGCACAUCCC
734


1655
Sequence
antisense
AGAU





strand







NR1H3-1590-
Artificial
27 mer
AGAACUGUCAUUCGUGCACAUCC
735


1656
Sequence
antisense
CAGA





strand







NR1H3-1591-
Artificial
27 mer
CAGAAUAGUCAUUCGUGCACAUC
736


1657
Sequence
antisense
CCAG





strand







NR1H3-1592-
Artificial
27 mer
ACAGAUCAGUCAUUCGUGCACAU
737


1658
Sequence
antisense
CCCA





strand







NR1H3-1593-
Artificial
27 mer
GACAGUACAGUCAUUCGUGCACA
738


1659
Sequence
antisense
UCCC





strand







NR1H3-1656-
Artificial
27 mer
UUCCAUUUCUAGGAGGCAGCCAC
739


1720
Sequence
antisense
CAGG





strand







NR1H3-1657-
Artificial
27 mer
GUUCCUCUUCUAGGAGGCAGCCA
740


1721
Sequence
antisense
CCAG





strand







NR1H3-1658-
Artificial
27 mer
UGUUCUACUUCUAGGAGGCAGCC
741


1722
Sequence
antisense
ACCA





strand







NR1H3-1659-
Artificial
27 mer
CUGUUUCACUUCUAGGAGGCAGC
742


1723
Sequence
antisense
CACC





strand







NR1H3-1660-
Artificial
27 mer
UCUGUUCCACUUCUAGGAGGCAG
743


1724
Sequence
antisense
CCAC





strand







NR1H3-1661-
Artificial
27 mer
GUCUGUUCCACUUCUAGGAGGCA
744


1725
Sequence
antisense
GCCA





strand







NR1H3-1662-
Artificial
27 mer
AGUCUUUUCCACUUCUAGGAGGC
745


1726
Sequence
antisense
AGCC





strand







NR1H3-1663-
Artificial
27 mer
CAGUCUGUUCCACUUCUAGGAGG
746


1727
Sequence
antisense
CAGC





strand







NR1H3-1664-
Artificial
27 mer
UCAGUUUGUUCCACUUCUAGGAG
747


1728
Sequence
antisense
GCAG





strand







NR1H3-1665-
Artificial
27 mer
CUCAGUCUGUUCCACUUCUAGGA
748


1729
Sequence
antisense
GGCA





strand







NR1H3-1666-
Artificial
27 mer
UCUCAUUCUGUUCCACUUCUAGG
749


1730
Sequence
antisense
AGGC





strand







NR1H3-1667-
Artificial
27 mer
UUCUCUGUCUGUUCCACUUCUAG
750


1731
Sequence
antisense
GAGG





strand







NR1H3-1668-
Artificial
27 mer
CUUCUUAGUCUGUUCCACUUCUA
751


1732
Sequence
antisense
GGAG





strand







NR1H3-1669-
Artificial
27 mer
CCUUCUCAGUCUGUUCCACUUCU
752


1733
Sequence
antisense
AGGA





strand







NR1H3-1671-
Artificial
27 mer
GCCCUUCUCAGUCUGUUCCACUU
753


1735
Sequence
antisense
CUAG





strand







NR1H3-1677-
Artificial
27 mer
AUGUUUGCCCUUCUCAGUCUGUU
754


1741
Sequence
antisense
CCAC





strand







NR1H3-1679-
Artificial
27 mer
GAAUGUUUGCCCUUCUCAGUCUG
755


1743
Sequence
antisense
UUCC





strand







NR1H3-1680-
Artificial
27 mer
GGAAUUUUUGCCCUUCUCAGUCU
756


1744
Sequence
antisense
GUUC





strand







NR1H3-1681-
Artificial
27 mer
AGGAAUGUUUGCCCUUCUCAGUC
757


1745
Sequence
antisense
UGUU





strand







NR1H3-1682-
Artificial
27 mer
CAGGAUUGUUUGCCCUUCUCAGU
758


1746
Sequence
antisense
CUGU





strand







NR1H3-1683-
Artificial
27 mer
CCAGGUAUGUUUGCCCUUCUCAG
759


1747
Sequence
antisense
UCUG





strand







NR1H3-1684-
Artificial
27 mer
CCCAGUAAUGUUUGCCCUUCUCA
760


1748
Sequence
antisense
GUCU





strand







NR1H3-1685-
Artificial
27 mer
UCCCAUGAAUGUUUGCCCUUCUC
761


1749
Sequence
antisense
AGUC





strand







NR1H3-1686-
Artificial
27 mer
CUCCCUGGAAUGUUUGCCCUUCU
762


1750
Sequence
antisense
CAGU





strand







NR1H3-1687-
Artificial
27 mer
GCUCCUAGGAAUGUUUGCCCUUC
763


1751
Sequence
antisense
UCAG





strand







NR1H3-1728-
Artificial
27 mer
UUUGAUUCUCUUUUAAUGCCACG
764


1792
Sequence
antisense
GGAG





strand







NR1H3-1729-
Artificial
27 mer
CUUUGUCUCUCUUUUAAUGCCAC
765


1793
Sequence
antisense
GGGA





strand







NR1H3-1730-
Artificial
27 mer
CCUUUUACUCUCUUUUAAUGCCA
766


1794
Sequence
antisense
CGGG





strand







NR1H3-1731-
Artificial
27 mer
CCCUUUGACUCUCUUUUAAUGCC
767


1795
Sequence
antisense
ACGG





strand







NR1H3-1732-
Artificial
27 mer
ACCCUUUGACUCUCUUUUAAUGC
768


1796
Sequence
antisense
CACG





strand







NR1H3-763-
Artificial
36 mer sense
GUGUCCUGUCAGAAGAACAAGCA
769


783-860
Sequence
strand
GCCGAAAGGCUGC






NR1H3-765-
Artificial
36 mer sense
GUCCUGUCAGAAGAACAGAAGCA
770


785-862
Sequence
strand
GCCGAAAGGCUGC






NR1H3-767-
Artificial
36 mer sense
CCUGUCAGAAGAACAGAUCAGCA
771


787-864
Sequence
strand
GCCGAAAGGCUGC






NR1H3-768-
Artificial
36 mer sense
CUGUCAGAAGAACAGAUCCAGCA
772


788-865
Sequence
strand
GCCGAAAGGCUGC






NR1H3-769-
Artificial
36 mer sense
UGUCAGAAGAACAGAUCCGAGCA
773


789-866
Sequence
strand
GCCGAAAGGCUGC






NR1H3-794-
Artificial
36 mer sense
GAAACUGAAGCGGCAAGAGAGC
774


814-891
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1152-
Artificial
36 mer sense
GUGAUGCUUCUGGAGACAUAGC
775


1172-1249
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1189-
Artificial
36 mer sense
GGAGUGAGAGUAUCACCUUAGC
776


1209-1286
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1195-
Artificial
36 mer sense
AGAGUAUCACCUUCCUCAAAGCA
777


1215-1292
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1200-
Artificial
36 mer sense
AUCACCUUCCUCAAGGAUUAGCA
778


1220-1297
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1201-
Artificial
36 mer sense
UCACCUUCCUCAAGGAUUUAGCA
779


1221-1298
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1202-
Artificial
36 mer sense
CACCUUCCUCAAGGAUUUCAGCA
780


1222-1299
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1203-
Artificial
36 mer sense
ACCUUCCUCAAGGAUUUCAAGCA
781


1223-1300
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1204-
Artificial
36 mer sense
CCUUCCUCAAGGAUUUCAGAGCA
782


1224-1301
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1205-
Artificial
36 mer sense
CUUCCUCAAGGAUUUCAGUAGCA
783


1225-1302
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1206-
Artificial
36 mer sense
UUCCUCAAGGAUUUCAGUUAGCA
784


1226-1303
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1208-
Artificial
36 mer sense
CCUCAAGGAUUUCAGUUAUAGCA
785


1228-1305
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1209-
Artificial
36 mer sense
CUCAAGGAUUUCAGUUAUAAGC
786


1229-1306
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1210-
Artificial
36 mer sense
UCAAGGAUUUCAGUUAUAAAGC
787


1230-1307
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1211-
Artificial
36 mer sense
CAAGGAUUUCAGUUAUAACAGC
788


1231-1308
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1212-
Artificial
36 mer sense
AAGGAUUUCAGUUAUAACCAGC
789


1232-1309
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1213-
Artificial
36 mer sense
AGGAUUUCAGUUAUAACCGAGC
790


1233-1310
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1214-
Artificial
36 mer sense
GGAUUUCAGUUAUAACCGGAGC
791


1234-1311
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1221-
Artificial
36 mer sense
AGUUAUAACCGGGAAGACUAGC
792


1241-1318
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1249-
Artificial
36 mer sense
CAGGGCUGCAAGUGGAAUUAGC
793


1269-1346
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1254-
Artificial
36 mer sense
CUGCAAGUGGAAUUCAUCAAGCA
794


1274-1351
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1255-
Artificial
36 mer sense
UGCAAGUGGAAUUCAUCAAAGC
795


1275-1352
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1256-
Artificial
36 mer sense
GCAAGUGGAAUUCAUCAACAGCA
796


1276-1353
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1257-
Artificial
36 mer sense
CAAGUGGAAUUCAUCAACCAGCA
797


1277-1354
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1260-
Artificial
36 mer sense
GUGGAAUUCAUCAACCCCAAGCA
798


1280-1357
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1261-
Artificial
36 mer sense
UGGAAUUCAUCAACCCCAUAGCA
799


1281-1358
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1263-
Artificial
36 mer sense
GAAUUCAUCAACCCCAUCUAGCA
800


1283-1360
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1264-
Artificial
36 mer sense
AAUUCAUCAACCCCAUCUUAGCA
801


1284-1361
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1405-
Artificial
36 mer sense
UGCAGCACACAUAUGUGGAAGCA
802


1471-1502
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1409-
Artificial
36 mer sense
GCACACAUAUGUGGAAGCCAGCA
803


1475-1506
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1458-
Artificial
36 mer sense
CAUGACCGACUGAUGUUCCAGCA
804


1524-1555
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1464-
Artificial
36 mer sense
CGACUGAUGUUCCCACGGAAGCA
805


1530-1561
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1465-
Artificial
36 mer sense
GACUGAUGUUCCCACGGAUAGCA
806


1531-1562
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1467-
Artificial
36 mer sense
CUGAUGUUCCCACGGAUGCAGCA
807


1533-1564
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1469-
Artificial
36 mer sense
GAUGUUCCCACGGAUGCUAAGCA
808


1535-1566
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1470-
Artificial
36 mer sense
AUGUUCCCACGGAUGCUAAAGCA
809


1536-1567
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1480-
Artificial
36 mer sense
GGAUGCUAAUGAAACUGGUAGC
810


1546-1577
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1482-
Artificial
36 mer sense
AUGCUAAUGAAACUGGUGAAGC
811


1548-1579
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1524-
Artificial
36 mer sense
CACUCAGAGCAAGUGUUUGAGCA
812


1590-1621
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1594-
Artificial
36 mer sense
AUGUGCACGAAUGACUGUUAGC
813


1660-1691
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1595-
Artificial
36 mer sense
UGUGCACGAAUGACUGUUCAGCA
814


1661-1692
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1596-
Artificial
36 mer sense
GUGCACGAAUGACUGUUCUAGCA
815


1662
Sequence
strand
GCCGAAAGGCUGC






NR1H3-1670-
Artificial
36 mer sense
UAGAAGUGGAACAGACUGAAGC
816


1734
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1672-
Artificial
36 mer sense
GAAGUGGAACAGACUGAGAAGC
817


1736
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1673-
Artificial
36 mer sense
AAGUGGAACAGACUGAGAAAGC
818


1737
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1674-
Artificial
36 mer sense
AGUGGAACAGACUGAGAAGAGC
819


1738
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1675-
Artificial
36 mer sense
GUGGAACAGACUGAGAAGGAGC
820


1739-1766
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1676-
Artificial
36 mer sense
UGGAACAGACUGAGAAGGGAGC
821


1740-1767
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1678-
Artificial
36 mer sense
GAACAGACUGAGAAGGGCAAGC
822


1742-1769
Sequence
strand
AGCCGAAAGGCUGC






NR1H3-1207-
Artificial
36 mer sense
UCCUCAAGGAUUUCAGUUAAGCA
823


1227
Sequence
strand
GCCGGGCUGC






NR1H3-1220-
Artificial
36 mer sense
CAGUUAUAACCGGGAAGACAGCA
824


1240
Sequence
strand
GCCGGGCUGC






NR1H3-1224-
Artificial
36 mer sense
UAUAACCGGGAAGACUUUGAGC
825


1244
Sequence
strand
AGCCGGGCUGC






NR1H3-1244-
Artificial
36 mer sense
CAAAGCAGGGCUGCAAGUGAGCA
826


1264
Sequence
strand
GCCGGGCUGC






NR1H3-1252-
Artificial
36 mer sense
GGCUGCAAGUGGAAUUCAUAGC
827


1272
Sequence
strand
AGCCGGGCUGC






NR1H3-1259-
Artificial
36 mer sense
AGUGGAAUUCAUCAACCCCAGCA
828


1279
Sequence
strand
GCCGGGCUGC






NR1H3-1265-
Artificial
36 mer sense
AUUCAUCAACCCCAUCUUCAGCA
829


1285
Sequence
strand
GCCGGGCUGC






NR1H3-1266-
Artificial
36 mer sense
UUCAUCAACCCCAUCUUCGAGCA
830


1286
Sequence
strand
GCCGGGCUGC






NR1H3-1429-
Artificial
36 mer sense
UGCAUGCCUACGUCUCCAUAGCA
831


1495
Sequence
strand
GCCGGGCUGC






NR1H3-1433-
Artificial
36 mer sense
UGCCUACGUCUCCAUCCACAGCA
832


1499
Sequence
strand
GCCGGGCUGC






NR1H3-1437-
Artificial
36 mer sense
UACGUCUCCAUCCACCAUCAGCA
833


1503
Sequence
strand
GCCGGGCUGC






NR1H3-1439-
Artificial
36 mer sense
CGUCUCCAUCCACCAUCCCAGCA
834


1505
Sequence
strand
GCCGGGCUGC






NR1H3-1446-
Artificial
36 mer sense
AUCCACCAUCCCCAUGACCAGCA
835


1512
Sequence
strand
GCCGGGCUGC






NR1H3-1463-
Artificial
36 mer sense
CCGACUGAUGUUCCCACGGAGCA
836


1529
Sequence
strand
GCCGGGCUGC






NR1H3-1475-
Artificial
36 mer sense
CCCACGGAUGCUAAUGAAAAGCA
837


1541
Sequence
strand
GCCGGGCUGC






NR1H3-1479-
Artificial
36 mer sense
CGGAUGCUAAUGAAACUGGAGC
838


1545
Sequence
strand
AGCCGGGCUGC






NR1H3-1481-
Artificial
36 mer sense
GAUGCUAAUGAAACUGGUGAGC
839


1547
Sequence
strand
AGCCGGGCUGC






NR1H3-1485-
Artificial
36 mer sense
CUAAUGAAACUGGUGAGCCAGCA
840


1551
Sequence
strand
GCCGGGCUGC






NR1H3-1515-
Artificial
36 mer sense
AGCAGCGUCCACUCAGAGCAGCA
841


1581
Sequence
strand
GCCGGGCUGC






NR1H3-1517-
Artificial
36 mer sense
CAGCGUCCACUCAGAGCAAAGCA
842


1583
Sequence
strand
GCCGGGCUGC






NR1H3-1518-
Artificial
36 mer sense
AGCGUCCACUCAGAGCAAGAGCA
843


1584
Sequence
strand
GCCGGGCUGC






NR1H3-1533-
Artificial
36 mer sense
CAAGUGUUUGCACUGCGUCAGCA
844


1599
Sequence
strand
GCCGGGCUGC






NR1H3-1535-
Artificial
36 mer sense
AGUGUUUGCACUGCGUCUGAGCA
845


1601
Sequence
strand
GCCGGGCUGC






NR1H3-1545-
Artificial
36 mer sense
CUGCGUCUGCAGGACAAAAAGCA
846


1611
Sequence
strand
GCCGGGCUGC






NR1H3-1554-
Artificial
36 mer sense
CAGGACAAAAAGCUCCCACAGCA
847


1620
Sequence
strand
GCCGGGCUGC






NR1H3-1581-
Artificial
36 mer sense
UCUGAGAUCUGGGAUGUGCAGC
848


1647
Sequence
strand
AGCCGGGCUGC






NR1H3-1586-
Artificial
36 mer sense
GAUCUGGGAUGUGCACGAAAGC
849


1652
Sequence
strand
AGCCGGGCUGC






NR1H3-1587-
Artificial
36 mer sense
AUCUGGGAUGUGCACGAAUAGC
850


1653
Sequence
strand
AGCCGGGCUGC






NR1H3-1588-
Artificial
36 mer sense
UCUGGGAUGUGCACGAAUGAGC
851


1654
Sequence
strand
AGCCGGGCUGC






NR1H3-1663-
Artificial
36 mer sense
UGCCUCCUAGAAGUGGAACAGCA
852


1727
Sequence
strand
GCCGGGCUGC






NR1H3-1671-
Artificial
36 mer sense
AGAAGUGGAACAGACUGAGAGC
853


1735
Sequence
strand
AGCCGGGCUGC






NR1H3-1684-
Artificial
36 mer sense
ACUGAGAAGGGCAAACAUUAGC
854


1748
Sequence
strand
AGCCGGGCUGC






NR1H3-1731-
Artificial
36 mer sense
GUGGCAUUAAAAGAGAGUCAGC
855


1795
Sequence
strand
AGCCGGGCUGC






NR1H3-1732-
Artificial
36 mer sense
UGGCAUUAAAAGAGAGUCAAGC
856


1796
Sequence
strand
AGCCGGGCUGC






NR1H3-763-
Artificial
22 mer
UUGUUCUUCUGACAGGACACGG
857


783-860
Sequence
antisense






strand







NR1H3-765-
Artificial
22 mer
UUCUGUUCUUCUGACAGGACGG
858


785-862
Sequence
antisense






strand







NR1H3-767-
Artificial
22 mer
UGAUCUGUUCUUCUGACAGGGG
859


787-864
Sequence
antisense






strand







NR1H3-768-
Artificial
22 mer
UGGAUCUGUUCUUCUGACAGGG
860


788-865
Sequence
antisense






strand







NR1H3-769-
Artificial
22 mer
UCGGAUCUGUUCUUCUGACAGG
861


789-866
Sequence
antisense






strand







NR1H3-794-
Artificial
22 mer
UCUCUUGCCGCUUCAGUUUCGG
862


814-891
Sequence
antisense






strand







NR1H3-1152-
Artificial
22 mer
UAUGUCUCCAGAAGCAUCACGG
863


1172-1249
Sequence
antisense






strand







NR1H3-1189-
Artificial
22 mer
UAAGGUGAUACUCUCACUCCGG
864


1209-1286
Sequence
antisense






strand







NR1H3-1195-
Artificial
22 mer
UUUGAGGAAGGUGAUACUCUGG
865


1215-1292
Sequence
antisense






strand







NR1H3-1200-
Artificial
22 mer
UAAUCCUUGAGGAAGGUGAUGG
866


1220-1297
Sequence
antisense






strand







NR1H3-1201-
Artificial
22 mer
UAAAUCCUUGAGGAAGGUGAGG
867


1221-1298
Sequence
antisense






strand







NR1H3-1202-
Artificial
22 mer
UGAAAUCCUUGAGGAAGGUGGG
868


1222-1299
Sequence
antisense






strand







NR1H3-1203-
Artificial
22 mer
UUGAAAUCCUUGAGGAAGGUGG
869


1223-1300
Sequence
antisense






strand







NR1H3-1204-
Artificial
22 mer
UCUGAAAUCCUUGAGGAAGGGG
870


1224-1301
Sequence
antisense






strand







NR1H3-1205-
Artificial
22 mer
UACUGAAAUCCUUGAGGAAGGG
871


1225-1302
Sequence
antisense






strand







NR1H3-1206-
Artificial
22 mer
UAACUGAAAUCCUUGAGGAAGG
872


1226-1303
Sequence
antisense






strand







NR1H3-1208-
Artificial
22 mer
UAUAACUGAAAUCCUUGAGGGG
873


1228-1305
Sequence
antisense






strand







NR1H3-1209-
Artificial
22 mer
UUAUAACUGAAAUCCUUGAGGG
874


1229-1306
Sequence
antisense






strand







NR1H3-1210-
Artificial
22 mer
UUUAUAACUGAAAUCCUUGAGG
875


1230-1307
Sequence
antisense






strand







NR1H3-1211-
Artificial
22 mer
UGUUAUAACUGAAAUCCUUGGG
876


1231-1308
Sequence
antisense






strand







NR1H3-1212-
Artificial
22 mer
UGGUUAUAACUGAAAUCCUUGG
877


1232-1309
Sequence
antisense






strand







NR1H3-1213-
Artificial
22 mer
UCGGUUAUAACUGAAAUCCUGG
878


1233-1310
Sequence
antisense






strand







NR1H3-1214-
Artificial
22 mer
UCCGGUUAUAACUGAAAUCCGG
879


1234-1311
Sequence
antisense






strand







NR1H3-1221-
Artificial
22 mer
UAGUCUUCCCGGUUAUAACUGG
880


1241-1318
Sequence
antisense






strand







NR1H3-1249-
Artificial
22 mer
UAAUUCCACUUGCAGCCCUGGG
881


1269-1346
Sequence
antisense






strand







NR1H3-1254-
Artificial
22 mer
UUGAUGAAUUCCACUUGCAGGG
882


1274-1351
Sequence
antisense






strand







NR1H3-1255-
Artificial
22 mer
UUUGAUGAAUUCCACUUGCAGG
883


1275-1352
Sequence
antisense






strand







NR1H3-1256-
Artificial
22 mer
UGUUGAUGAAUUCCACUUGCGG
884


1276-1353
Sequence
antisense






strand







NR1H3-1257-
Artificial
22 mer
UGGUUGAUGAAUUCCACUUGGG
885


1277-1354
Sequence
antisense






strand







NR1H3-1260-
Artificial
22 mer
UUGGGGUUGAUGAAUUCCACGG
886


1280-1357
Sequence
antisense






strand







NR1H3-1261-
Artificial
22 mer
UAUGGGGUUGAUGAAUUCCAGG
887


1281-1358
Sequence
antisense






strand







NR1H3-1263-
Artificial
22 mer
UAGAUGGGGUUGAUGAAUUCGG
888


1283-1360
Sequence
antisense






strand







NR1H3-1264-
Artificial
22 mer
UAAGAUGGGGUUGAUGAAUUGG
889


1284-1361
Sequence
antisense






strand







NR1H3-1405-
Artificial
22 mer
UUCCACAUAUGUGUGCUGCAGG
890


1471-1502
Sequence
antisense






strand







NR1H3-1409-
Artificial
22 mer
UGGCUUCCACAUAUGUGUGCGG
891


1475-1506
Sequence
antisense






strand







NR1H3-1458-
Artificial
22 mer
UGGAACAUCAGUCGGUCAUGGG
892


1524-1555
Sequence
antisense






strand







NR1H3-1464-
Artificial
22 mer
UUCCGUGGGAACAUCAGUCGGG
893


1530-1561
Sequence
antisense






strand







NR1H3-1465-
Artificial
22 mer
UAUCCGUGGGAACAUCAGUCGG
894


1531-1562
Sequence
antisense






strand







NR1H3-1467-
Artificial
22 mer
UGCAUCCGUGGGAACAUCAGGG
895


1533-1564
Sequence
antisense






strand







NR1H3-1469-
Artificial
22 mer
UUAGCAUCCGUGGGAACAUCGG
896


1535-1566
Sequence
antisense






strand







NR1H3-1470-
Artificial
22 mer
UUUAGCAUCCGUGGGAACAUGG
897


1536-1567
Sequence
antisense






strand







NR1H3-1480-
Artificial
22 mer
UACCAGUUUCAUUAGCAUCCGG
898


1546-1577
Sequence
antisense






strand







NR1H3-1482-
Artificial
22 mer
UUCACCAGUUUCAUUAGCAUGG
899


1548-1579
Sequence
antisense






strand







NR1H3-1524-
Artificial
22 mer
UCAAACACUUGCUCUGAGUGGG
900


1590-1621
Sequence
antisense






strand







NR1H3-1594-
Artificial
22 mer
UAACAGUCAUUCGUGCACAUGG
901


1660-1691
Sequence
antisense






strand







NR1H3-1595-
Artificial
22 mer
UGAACAGUCAUUCGUGCACAGG
902


1661-1692
Sequence
antisense






strand







NR1H3-1596-
Artificial
22 mer
UAGAACAGUCAUUCGUGCACGG
903


1662
Sequence
antisense






strand







NR1H3-1670-
Artificial
22 mer
UUCAGUCUGUUCCACUUCUAGG
904


1734
Sequence
antisense






strand







NR1H3-1672-
Artificial
22 mer
UUCUCAGUCUGUUCCACUUCGG
905


1736
Sequence
antisense






strand







NR1H3-1673-
Artificial
22 mer
UUUCUCAGUCUGUUCCACUUGG
906


1737
Sequence
antisense






strand







NR1H3-1674-
Artificial
22 mer
UCUUCUCAGUCUGUUCCACUGG
907


1738
Sequence
antisense






strand







NR1H3-1675-
Artificial
22 mer
UCCUUCUCAGUCUGUUCCACGG
908


1739-1766
Sequence
antisense






strand







NR1H3-1676-
Artificial
22 mer
UCCCUUCUCAGUCUGUUCCAGG
909


1740-1767
Sequence
antisense






strand







NR1H3-1678-
Artificial
22 mer
UUGCCCUUCUCAGUCUGUUCGG
910


1742-1769
Sequence
antisense






strand







NR1H3-1207-
Artificial
22 mer
UUAACUGAAAUCCUUGAGGAGG
911


1227
Sequence
antisense






strand







NR1H3-1220-
Artificial
22 mer
UGUCUUCCCGGUUAUAACUGGG
912


1240
Sequence
antisense






strand







NR1H3-1224-
Artificial
22 mer
UCAAAGUCUUCCCGGUUAUAGG
913


1244
Sequence
antisense






strand







NR1H3-1244-
Artificial
22 mer
UCACUUGCAGCCCUGCUUUGGG
914


1264
Sequence
antisense






strand







NR1H3-1252-
Artificial
22 mer
UAUGAAUUCCACUUGCAGCCGG
915


1272
Sequence
antisense






strand







NR1H3-1259-
Artificial
22 mer
UGGGGUUGAUGAAUUCCACUGG
916


1279
Sequence
antisense






strand








Artificial
22 mer
UGAAGAUGGGGUUGAUGAAUGG
917


NR1H3-1265-
Sequence
antisense




1285

strand








Artificial
22 mer
UCGAAGAUGGGGUUGAUGAAGG
918


NR1H3-1266-
Sequence
antisense




1286

strand







NR1H3-1429-
Artificial
22 mer
UAUGGAGACGUAGGCAUGCAGG
919


1495
Sequence
antisense






strand







NR1H3-1433-
Artificial
22 mer
UGUGGAUGGAGACGUAGGCAGG
920


1499
Sequence
antisense






strand







NR1H3-1437-
Artificial
22 mer
UGAUGGUGGAUGGAGACGUAGG
921


1503
Sequence
antisense






strand







NR1H3-1439-
Artificial
22 mer
UGGGAUGGUGGAUGGAGACGGG
922


1505
Sequence
antisense






strand







NR1H3-1446-
Artificial
22 mer
UGGUCAUGGGGAUGGUGGAUGG
923


1512
Sequence
antisense






strand







NR1H3-1463-
Artificial
22 mer
UCCGUGGGAACAUCAGUCGGGG
924


1529
Sequence
antisense






strand







NR1H3-1475-
Artificial
22 mer
UUUUCAUUAGCAUCCGUGGGGG
925


1541
Sequence
antisense






strand







NR1H3-1479-
Artificial
22 mer
UCCAGUUUCAUUAGCAUCCGGG
926


1545
Sequence
antisense






strand







NR1H3-1481-
Artificial
22 mer
UCACCAGUUUCAUUAGCAUCGG
927


1547
Sequence
antisense






strand







NR1H3-1485-
Artificial
22 mer
UGGCUCACCAGUUUCAUUAGGG
928


1551
Sequence
antisense






strand







NR1H3-1515-
Artificial
22 mer
UGCUCUGAGUGGACGCUGCUGG
929


1581
Sequence
antisense






strand







NR1H3-1517-
Artificial
22 mer
UUUGCUCUGAGUGGACGCUGGG
930


1583
Sequence
antisense






strand







NR1H3-1518-
Artificial
22 mer
UCUUGCUCUGAGUGGACGCUGG
931


1584
Sequence
antisense






strand







NR1H3-1533-
Artificial
22 mer
UGACGCAGUGCAAACACUUGGG
932


1599
Sequence
antisense






strand







NR1H3-1535-
Artificial
22 mer
UCAGACGCAGUGCAAACACUGG
933


1601
Sequence
antisense






strand







NR1H3-1545-
Artificial
22 mer
UUUUUGUCCUGCAGACGCAGGG
934


1611
Sequence
antisense






strand







NR1H3-1554-
Artificial
22 mer
UGUGGGAGCUUUUUGUCCUGGG
935


1620
Sequence
antisense






strand







NR1H3-1581-
Artificial
22 mer
UGCACAUCCCAGAUCUCAGAGG
936


1647
Sequence
antisense






strand







NR1H3-1586-
Artificial
22 mer
UUUCGUGCACAUCCCAGAUCGG
937


1652
Sequence
antisense






strand







NR1H3-1587-
Artificial
22 mer
UAUUCGUGCACAUCCCAGAUGG
938


1653
Sequence
antisense






strand







NR1H3-1588-
Artificial
22 mer
UCAUUCGUGCACAUCCCAGAGG
939


1654
Sequence
antisense






strand







NR1H3-1663-
Artificial
22 mer
UGUUCCACUUCUAGGAGGCAGG
940


1727
Sequence
antisense






strand







NR1H3-1671-
Artificial
22 mer
UCUCAGUCUGUUCCACUUCUGG
941


1735
Sequence
antisense






strand







NR1H3-1684-
Artificial
22 mer
UAAUGUUUGCCCUUCUCAGUGG
942


1748
Sequence
antisense






strand







NR1H3-1731-
Artificial
22 mer
UGACUCUCUUUUAAUGCCACGG
943


1795
Sequence
antisense






strand







NR1H3-1732-
Artificial
22 mer
UUGACUCUCUUUUAAUGCCAGG
944


1796
Sequence
antisense






strand







NR1H3-763-
Artificial
Modified
[mGs][mU][mG][mU][mC][mC][mU]
945


783-860
Sequence
sense strand
[fG][fU][fC][fA][mG][mA][mA][mG]






[mA][mA][mC][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-765-
Artificial
Modified
[mGs][mU][mC][mC][mU][mG][mU]
946


785-862
Sequence
sense strand
[fC][fA][fG][fA][mA][mG][mA][mA]






[mC][mA][mG][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-767-
Artificial
Modified
[mCs][mC][mU][mG][mU][mC][mA]
947


787-864
Sequence
sense strand
[fG][fA][fA][fG][mA][mA][mC][mA]






[mG][mA][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-768-
Artificial
Modified
[mCs][mU][mG][mU][mC][mA][mG]
948


788-865
Sequence
sense strand
[fA][fA][fG][fA][mA][mC][mA][mG]






[mA][mU][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-769-
Artificial
Modified
[mUs][mG][mU][mC][mA][mG][mA]
949


789-866
Sequence
sense strand
[fA][fG][fA][fA][mC][mA][mG][mA]






[mU][mC][mC][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-794-
Artificial
Modified
[mGs][mA][mA][mA][mC][mU][mG]
950


814-891
Sequence
sense strand
[fA][fA][fG][fC][mG][mG][mC][mA]






[mA][mG][mA][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1152-
Artificial
Modified
[mGs][mU][mG][mA][mU][mG][mC]
951


1172-1249
Sequence
sense strand
[fU][fU][fC][fU][mG][mG][mA][mG]






[mA][mC][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1189-
Artificial
Modified
[mGs][mG][mA][mG][mU][mG][mA]
952


1209-1286
Sequence
sense strand
[fG][fA][fG][fU][mA][mU][mC][mA]






[mC][mC][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1195-
Artificial
Modified
[mAs][mG][mA][mG][mU][mA][mU]
953


1215-1292
Sequence
sense strand
[fC][fA][fC][fC][mU][mU][mC][mC]






[mU][mC][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1200-
Artificial
Modified
[mAs][mU][mC][mA][mC][mC][mU]
954


1220-1297
Sequence
sense strand
[fU][fC][fC][fU][mC][mA][mA][mG]






[mG][mA][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1201-
Artificial
Modified
[mUs][mC][mA][mC][mC][mU][mU]
955


1221-1298
Sequence
sense strand
[fC][fC][fU][fC][mA][mA][mG][mG]






[mA][mU][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1202-
Artificial
Modified
[mCs][mA][mC][mC][mU][mU][mC]
956


1222-1299
Sequence
sense strand
[fC][fU][fC][fA][mA][mG][mG][mA]






[mU][mU][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1203-
Artificial
Modified
[mAs][mC][mC][mU][mU][mC][mC]
957


1223-1300
Sequence
sense strand
[fU][fC][fA][fA][mG][mG][mA][mU]






[mU][mU][mC][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1204-
Artificial
Modified
[mCs][mC][mU][mU][mC][mC][mU]
958


1224-1301
Sequence
sense strand
[fC][fA][fA][fG][mG][mA][mU][mU]






[mU][mC][mA][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1205-
Artificial
Modified
[mCs][mU][mU][mC][mC][mU][mC]
959


1225-1302
Sequence
sense strand
[fA][fA][fG][fG][mA][mU][mU][mU]






[mC][mA][mG][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1206-
Artificial
Modified
[mUs][mU][mC][mC][mU][mC][mA]
960


1226-1303
Sequence
sense strand
[fA][fG][fG][fA][mU][mU][mU][mC]






[mA][mG][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1207-
Artificial
Modified
[mUs][mC][mC][mU][mC][mA][mAf
961


1227
Sequence
sense strand
[fG][fG][fA][fU][mU][mU][mC][mA]






[mG][mU][mU][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1208-
Artificial
Modified
[mCs][mC][mU][mC][mA][mA][mG]
962


1228-1305
Sequence
sense strand
[fG][fA][fU][fU][mU][mC][mA][mG]






[mU][mU][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1209-
Artificial
Modified
[mCs][mU][mC][mA][mA][mG][mG]
963


1229-1306
Sequence
sense strand
[fA][fU][fU][fU][mC][mA][mG][mU]






[mU][mA][mU][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1210-
Artificial
Modified
[mUs][mC][mA][mA][mG][mG][mA]
964


1230-1307
Sequence
sense strand
[fU][fU][fU][fC][mA][mG][mU][mU]






[mA][mU][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1211-
Artificial
Modified
[mCs][mA][mA][mG][mG][mA][mU]
965


1231-1308
Sequence
sense strand
[fU][fU][fC][fA][mG][mU][mU][mA]






[mU][mA][mA][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC






NR1H3-1212-
Artificial
Modified
[mAs][mA][mG][mG][mA][mU][mU]
966


1232-1309
Sequence
sense strand
[fU][fC][fA][fG][mU][mU][mA][mU]






[mA][mA][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1213-
Artificial
Modified
[mAs][mG][mG][mA][mU][mU][mU]
967


1233-1310
Sequence
sense strand
[fC][fA][fG][fU][mU][mA][mU][mA]






[mA][mC][mC][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1214-
Artificial
Modified
[mGs][mG][mA][mU][mU][mU][mC]
968


1234-1311
Sequence
sense strand
[fA][fG][fU][fU][mA][mU][mA][mA]






[mC][mC][mG][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1220
Artificial
Modified
[mCs][mA][mG][mU][mU][mA][mU]
969



Sequence
sense strand
[fA][fA][fC][fC][mG][mG][mG][mA]






[mA][mG][mA][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1221-
Artificial
Modified
[mAs][mG][mU][mU][mA][mU][mA]
970


1241-1318
Sequence
sense strand
[fA][fC][fC][fG][mG][mG][mA][mA]






[mG][mA][mC][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1224-
Artificial
Modified
[mUs][mA][mU][mA][mA][mC][mC]
971


1244
Sequence
sense strand
[mU][mU][mU][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1244-
Artificial
Modified
[mCs][mA][mA][mA][mG][mC][mA]
972


1264
Sequence
sense strand
[fG][fG][fG][fC][mU][mG][mC][mA]






[mA][mG][mU][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1249-
Artificial
Modified
[mCs][mA][mG][mG][mG][mC][mU]
973


1269-1346
Sequence
sense strand
[fG][fC][fA][fA][mG][mU][mG][mG]






[mA][mA][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1252-
Artificial
Modified
[mGs][mG][mC][mU][mG][mC][mA]
974


1272
Sequence
sense strand
[fA][fG][fU][fG][mG][mA][mA][mU]






[mU][mC][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1254-
Artificial
Modified
[mCs][mU][mG][mC][mA][mA][mG]
975


1274-1351
Sequence
sense strand
[fU][fG][fG][fA][mA][mU][mU][mC]






[mA][mU][mC][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1255-
Artificial
Modified
[mUs][mG][mC][mA][mA][mG][mU]
976


1275-1352
Sequence
sense strand
[fG][fG][fA][fA][mU][mU][mC][mA]






[mU][mC][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1256-
Artificial
Modified
[mGs][mC][mA][mA][mG][mU][mG]
977


1276-1353
Sequence
sense strand
[fG][fA][fA][fU][mU][mC][mA][mU]






[mC][mA][mA][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1257-
Artificial
Modified
[mCs][mA][mA][mG][mU][mG][mG]
978


1277-1354
Sequence
sense strand
[fA][fA][fU][fU][mC][mA][mU][mC]






[mA][mA][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1259
Artificial
Modified
[mAs][mG][mU][mG][mG][mA][mA]
979



Sequence
sense strand
[fU][fU][fC][fA][mU][mC][mA][mA]






[mC][mC][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1260-
Artificial
Modified
[mGs][mU][mG][mG][mA][mA][mU][f
980


1280-1357
Sequence
sense strand
[fU][fC][fA][fU][mC][mA][mA][mC]






[mC][mC][mC][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1261-
Artificial
Modified
[mUs][mG][mG][mA][mA][mU][mU]
981


1281-1358
Sequence
sense strand
[fC][fA][fU][fC][mA][mA][mC][mC]






[mC][mC][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAclrademA-GalNAclrademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1263-
Artificial
Modified
[mGs][mA][mA][mU][mU][mC][mA]
982


1283-1360
Sequence
sense strand
[fU][fC][fA][fA][mC][mC][mC][mC]






[mA][mU][mC][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1264-
Artificial
Modified
[mAs][mA][mU][mU][mC][mA][mU]
983


1284-1361
Sequence
sense strand
[fC][fA][fA][fC][mC][mC][mC][mA]






[mU][mC][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1265-
Artificial
Modified
[mAs][mU][mU][mC][mA][mU][mC]
984


1285
Sequence
sense strand
[fA][fA][fC][fC][mC][mC][mA][mU]






[mC][mU][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1266-
Artificial
Modified
[mUs][mU][mC][mA][mU][mC][mA]
985


1286
Sequence
sense strand
[fA][fC][fC][fC][mC][mA][mU][mC]






[mU][mU][mC][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1405-
Artificial
Modified
[mUs][mG][mC][mA][mG][mC][mA]
986


1471-1502
Sequence
sense strand
[fC][fA][fC][fA][mU][mA][mU][mG]






[mU][mG][mG][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1409-
Artificial
Modified
[mGs][mC][mA][mC][mA][mC][mA]
987


1475-1506
Sequence
sense strand
[fU][fA][fU][fG][mU][mG][mG][mA]






[mA][mG][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1429-
Artificial
Modified
[mUs][mG][mC][mA][mU][mG][mC]
988


1495
Sequence
sense strand
[fC][fU][fA][fC][mG][mU][mC][mU]






[mC][mC][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1433-
Artificial
Modified
[mUs][mG][mC][mC][mU][mA][mC]
989


1499
Sequence
sense strand
[fG][fU][fC][fU][mC][mC][mA][mU]






[mC][mC][mA][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1437-
Artificial
Modified
[mUs][mA][mC][mG][mU][mC][mU]
990


1503
Sequence
sense strand
[fC][fC][fA][fU][mC][mC][mA][mC]






[mC][mA][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1439-
Artificial
Modified
[mCs][mG][mU][mC][mU][mC][mC]
991


1505
Sequence
sense strand
[fA][fU][fC][fC][mA][mC][mC][mA]






[mU][mC][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1446-
Artificial
Modified
[mAs][mU][mC][mC][mA][mC][mC]
992


1512
Sequence
sense strand
[fA][fU][fC][fC][mC][mC][mA][mU]






[mG][mA][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1458-
Artificial
Modified
[mCs][mA][mU][mG][mA][mC][mC]
993


1524-1555
Sequence
sense strand
[fG][fA][fC][fU][mG][mA][mU][mG]






[mU][mU][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1463-
Artificial
Modified
[mCs][mC][mG][mA][mC][mU][mG]
994


1529
Sequence
sense strand
[fA][fU][fG][fU][mU][mC][mC][mC]






[mA][mC][mG][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1464-
Artificial
Modified
[mCs][mG][mA][mC][mU][mG][mA]
995


1530-1561
Sequence
sense strand
[fU][fG][fU][fU][mC][mC][mC][mA]






[mC][mG][mG][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1465-
Artificial
Modified
[mGs][mA][mC][mU][mG][mA][mU]
996


1531-1562
Sequence
sense strand
[fG][fU][fU][fC][mC][mC][mA][mC]






[mG][mG][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1467-
Artificial
Modified
[mCs][mU][mG][mA][mU][mG][mU]
997


1533-1564
Sequence
sense strand
[fU][fC][fC][fC][mA][mC][mG][mG]






[mA][mU][mG][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1469-
Artificial
Modified
[mGs][mA][mU][mG][mU][mU][mC]
998


1535-1566
Sequence
sense strand
[fC][fC][fA][fC][mG][mG][mA][mU]






[mG][mC][mU][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1470-
Artificial
Modified
[mAs][mU][mG][mU][mU][mC][mC]
999


1536-1567
Sequence
sense strand
[fC][fA][fC][fG][mG][mA][mU][mG]






[mC][mU][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1475-
Artificial
Modified
[mCs][mC][mC][mA][mC][mG][mG]
1000


1541
Sequence
sense strand
[fA][fU][fG][fC][mU][mA][mA][mU]






[mG][mA][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1479-
Artificial
Modified
[mCs][mG][mG][mA][mU][mG][mC]
1001


1545
Sequence
sense strand
[fU][fA][fA][fU][mG][mA][mA][mA]






[mC][mU][mG][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1480-
Artificial
Modified
[mGs][mG][mA][mU][mG][mC][mU]
1002


1546-1577
Sequence
sense strand
[fA][fA][fU][fG][mA][mA][mA][mC]






[mU][mG][mG][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1481-
Artificial
Modified
[mGs][mA][mU][mG][mC][mU][mA]
1003


1547
Sequence
sense strand
[fA][fU][fG][fA][mA][mA][mC][mU]






[mG][mG][mU][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1482-
Artificial
Modified
[mAs][mU][mG][mC][mU][mA][mA]
1004


1548-1579
Sequence
sense strand
[fU][fG][fA][fA][mA][mC][mU][mG]






[mG][mU][mG][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1485-
Artificial
Modified
[mCs][mU][mA][mA][mU][mG][mA]
1005


1551
Sequence
sense strand
[fA][fA][fC][fU][mG][mG][mU][mG]






[mA][mG][mC][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1515-
Artificial
Modified
[mAs][mG][mC][mA][mG][mC][mG]
1006


1581
Sequence
sense strand
[fU][fC][fC][fA][mC][mU][mC][mA]






[mG][mA][mG][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1517-
Artificial
Modified
[mCs][mA][mG][mC][mG][mU][mC]
1007


1583
Sequence
sense strand
[fC][fA][fC][fU][mC][mA][mG][mA]






[mG][mC][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1518-
Artificial
Modified
[mAs][mG][mC][mG][mU][mC][mC]
1008


1584
Sequence
sense strand
[fA][fC][fU][fC][mA][mG][mA][mG]






[mC][mA][mA][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1524-
Artificial
Modified
[mCs][mA][mC][mU][mC][mA][mG]
1009


1590-1621
Sequence
sense strand
[fA][fG][fC][fA][mA][mG][mU][mG]






[mU][mU][mU][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1533-
Artificial
Modified
[mCs][mA][mA][mG][mU][mG][mU]
1010


1599
Sequence
sense strand
[fU][fU][fG][fC][mA][mC][mU][mG]






[mC][mG][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1535-
Artificial
Modified
[mAs][mG][mU][mG][mU][mU][mU]
1011


1601
Sequence
sense strand
[fG][fC][fA][fC][mU][mG][mC][mG]






[mU][mC][mU][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1545-
Artificial
Modified
[mCs][mU][mG][mC][mG][mU][mC]
1012


1611
Sequence
sense strand
[fU][fG][fC][fA][mG][mG][mA][mC]






[mA][mA][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1554-
Artificial
Modified
[mCs][mA][mG][mG][mA][mC][mA]
1013


1620
Sequence
sense strand
[fA][fA][fA][fA][mG][mC][mU][mC]






[mC][mC][mA][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1581-
Artificial
Modified
[mUs][mC][mU][mG][mA][mG][mA]
1014


1647
Sequence
sense strand
[fU][fC][fU][fG][mG][mG][mA][mU]






[mG][mU][mG][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1586-
Artificial
Modified
[mGs][mA][mU][mC][mU][mG][mG]
1015


1652
Sequence
sense strand
[fG][fA][fU][fG][mU][mG][mC][mA]






[mC][mG][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1587-
Artificial
Modified
[mAs][mU][mC][mU][mG][mG][mG]
1016


1653
Sequence
sense strand
[fA][fU][fG][fU][mG][mC][mA][mC]






[mG][mA][mA][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1588-
Artificial
Modified
[mUs][mC][mU][mG][mG][mG][mA]
1017


1654
Sequence
sense strand
[fU][fG][fU][fG][mC][mA][mC][mG]






[mA][mA][mU][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1594-
Artificial
Modified
[mAs][mU][mG][mU][mG][mC][mA]
1018


1660-1691
Sequence
sense strand
[fC][fG][fA][fA][mU][mG][mA][mC]






[mU][mG][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1595-
Artificial
Modified
[mUs][mG][mU][mG][mC][mA][mC]
1019


1661-1692
Sequence
sense strand
[fG][fA][fA][fU][mG][mA][mC][mU]






[mG][mU][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1596-
Artificial
Modified
[mGs][mU][mG][mC][mA][mC][mG]
1020


1662
Sequence
sense strand
[fA][fA][fU][fG][mA][mC][mU][mG]






[mU][mU][mC][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1663-
Artificial
Modified
[mUs][mG][mC][mC][mU][mC][mC]
1021


1727
Sequence
sense strand
[fU][fA][fG][fA][mA][mG][mU][mG]






[mG][mA][mA][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1670-
Artificial
Modified
[mUs][mA][mG][mA][mA][mG][mU]
1022


1734
Sequence
sense strand
[fG][fG][fA][fA][mC][mA][mG][mA]






[mC][mU][mG][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1671-
Artificial
Modified
[mAs][mG][mA][mA][mG][mU][mG]
1023


1735
Sequence
sense strand
[fG][fA][fA][fC][mA][mG][mA][mC]






[mU][mG][mA][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1672-
Artificial
Modified
[mGs][mA][mA][mG][mU][mG][mG]
1024


1736
Sequence
sense strand
[fA][fA][fC][fA][mG][mA][mC][mU]






[mG][mA][mG][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1673-
Artificial
Modified
[mAs][mA][mG][mU][mG][mG][mA]
1025


1737
Sequence
sense strand
[fA][fC][fA][fG][mA][mC][mU][mG]






[mA][mG][mA][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1674-
Artificial
Modified
[mAs][mG][mU][mG][mG][mA][mA]
1026


1738
Sequence
sense strand
[fC][fA][fG][fA][mC][mU][mG][mA]






[mG][mA][mA][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1675-
Artificial
Modified
[mGs][mU][mG][mG][mA][mA][mC]
1027


1739-1766
Sequence
sense strand
[fA][fG][fA][fC][mU][mG][mA][mG]






[mA][mA][mG][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1676-
Artificial
Modified
[mUs][mG][mG][mA][mA][mC][mA]
1028


1740-1767
Sequence
sense strand
[fG][fA][fC][fU][mG][mA][mG][mA]






[mA][mG][mG][mG][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1678-
Artificial
Modified
[mGs][mA][mA][mC][mA][mG][mA]
1029


1742-1769
Sequence
sense strand
[fC][fU][fG][fA][mG][mA][mA][mG]






[mG][mG][mC][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1684-
Artificial
Modified
[mAs][mC][mU][mG][mA][mG][mA]
1030


1748
Sequence
sense strand
[fA][fG][fG][fG][mC][mA][mA][mA]






[mC][mA][mU][mU][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1731-
Artificial
Modified
[mGs][mU][mG][mG][mC][mA][mU]
1031


1795
Sequence
sense strand
[fU][fA][fA][fA][mA][mG][mA][mG]






[mA][mG][mU][mC][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-1732-
Artificial
Modified
[mUs][mG][mG][mC][mA][mU][mU]
1032


1796
Sequence
sense strand
[fA][fA][fA][fA][mG][mA][mG][mA]






[mG][mU][mC][mA][mA][mG][mC][mA]






[mG][mC][mC][mG][ademA-






GalNAc][ademA-GalNAc][ademA-






GalNAc][mG][mG][mC][mU][mG][mC]






NR1H3-763-
Artificial
Modified
[MePhosphonate-4O-
1033


783-860
Sequence
antisense
mUs][fUs][fGs][fU][fU][mC][fU][mU]





strand
[mC][fU][mG][mA][mC][fA][mG][mG]






[mA][mC][mA][mCs][mGs][mG]






NR1H3-765-
Artificial
Modified
[MePhosphonate-4O-
1034


785-862
Sequence
antisense
mUs][fUs][fCs][fU][fG][mU][fU][mC]





strand
[mU][fU][mC][mU][mG][fA][mC][mA]






[mG][mG][mA][mCs][mGs][mG]






NR1H3-767-
Artificial
Modified
[MePhosphonate-4O-
1035


787-864
Sequence
antisense
mUs][fGs][fAs][fU][fC][mU][fG][mU]





strand
[mU][fC][mU][mU][mC][fU][mG][mA]






[mC][mA][mG][mGs][mGs][mG]






NR1H3-768-
Artificial
Modified
[MePhosphonate-4O-
1036


788-865
Sequence
antisense
mUs][fGs][fGs][fA][fU][mC][fU][mG]





strand
[mU][fU][mC][mU][mU][fC][mU][mG]






[mA][mC][mA][mGs][mGs][mG]






NR1H3-769-
Artificial
Modified
[MePhosphonate-4O-
1037


789-866
Sequence
antisense
mUs][fCs][fG][mG][fA][mU][fC][mU]





strand
[mG][fU][mU][mC][mU][fU][mC][mU]






[mG][mA][mC][mAs][mGs][mG]






NR1H3-794-
Artificial
Modified
[MePhosphonate-4O-
1038


814-891
Sequence
antisense
mUs][fCs][fUs][fC][fU][mU][fG][mC]





strand
[mC][fG][mC][mU][mU][fC][mA][mG]






[mU][mU][mU][mCs][mGs][mG]






NR1H3-1152-
Artificial
Modified
[MePhosphonate-4O-
1039


1172-1249
Sequence
antisense
[mUs][fAs][fUs][fG][fU][mC][fU][mC]





strand
[mC][fA][mG][mA][mA][fG][mC][mA]






[mU][mC][mA][mCs][mGs][mG]






NR1H3-1189-
Artificial
Modified
[MePhosphonate-4O-
1040


1209-1286
Sequence
antisense
mUs][fAs][fAs][fG][fG][mU][fG][mA]





strand
[mU][fA][mC][mU][mC][fU][mC][mA]






[mC][mU][mC][mCs][mGs][mG]






NR1H3-1195-
Artificial
Modified
[MePhosphonate-4O-
1041


1215-1292
Sequence
antisense
mUs][fUs][fUs][fG][fA][mG][fG][mA]





strand
[mA][fG][mG][mU][mG][fA][mU][mA]






[mC][mU][mC][mUs][mGs][mG]






NR1H3-1200-
Artificial
Modified
[MePhosphonate-4O-
1042


1220-1297
Sequence
antisense
mUs][fAs][fAs][fU][fC][mC][fU][mU]





strand
[mG][fA][mG][mG][mA][fA][mG][mG]






[mU][mG][mA][mUs][mGs][mG]






NR1H3-1201-
Artificial
Modified
[MePhosphonate-4O-
1043


1221-1298
Sequence
antisense
mUs][fAs][fAs][fA][fU][mC][fC][mU]





strand
[mU][fG][mA][mG][mG][fA][mA][mG]






[mG][mU][mG][mAs][mGs][mG]






NR1H3-1202-
Artificial
Modified
[MePhosphonate-4O-
1044


1222-1299
Sequence
antisense
mUs][fGs][fAs][fA][fA][mU][fC][mC]





strand
[mU][fU][mG][mA][mG][fG][mA][mA]






[mG][mG][mU][mGs][mGs][mG]






NR1H3-1203-
Artificial
Modified
[MePhosphonate-4O-
1045


1223-1300
Sequence
antisense
mUs][fUs][fGs][fA][fA][mA][fU][mC]





strand
[mC][fU][mU][mG][mA][fG][mG][mA]






[mA][mG][mG][mUs][mGs][mG]






NR1H3-1204-
Artificial
Modified
[MePhosphonate-4O-
1046


1224-1301
Sequence
antisense
mUs][fCs][fUs][fG][fA][mA][fA][mU]





strand
[mC][fC][mU][mU][mG][fA][mG][mG]






[mA][mA][mG][mGs][mGs][mG]






NR1H3-1205-
Artificial
Modified
[MePhosphonate-4O-
1047


1225-1302
Sequence
antisense
mUs][fAs][fCs][fU][fG][mA][fA][mA]





strand
[mU][fC][mC][mU][mU][fG][mA][mG]






[mG][mA][mA][mGs][mGs][mG]






NR1H3-1206-
Artificial
Modified
[MePhosphonate-4O-
1048


1226-1303
Sequence
antisense
mUs][fAs][fAs][fC][fU][mG][fA][mA]





strand
[mA][fU][mC][mC][mU][fU][mG][mA]






[mG][mG][mA][mAs][mGs][mG]






NR1H3-1207-
Artificial
Modified
[MePhosphonate-4O-
1049


1227
Sequence
antisense
mUs][fUs][fAs][fA][fC][mU][fG][mA]





strand
[mA][fA][mU][mC][mC][fU][mU][mG]






[mA][mG][mG][mAs][mGs][mG]






NR1H3-1208-
Artificial
Modified
[MePhosphonate-4O-
1050


1228-1305
Sequence
antisense
mUs][fAs][fUs][fA][fA][mC][fU][mG]





strand
[mA][fA][mA][mU][mC][fC][mU][mU]






[mG][mA][mG][mGs][mGs][mG]






NR1H3-1209-
Artificial
Modified
[MePhosphonate-4O-
1051


1229-1306
Sequence
antisense
mUs][fUs][fAs][fU][fA][mA][fC][mU]





strand
[mG][fA][mA][mA][mU][fC][mC][mU]






[mU][mG][mA][mGs][mGs][mG]






NR1H3-1210-
Artificial
Modified
[MePhosphonate-4O-
1052


1230-1307
Sequence
antisense
mUs][fUs][fUs][fA][fU][mA][fA][mC]





strand
[mU][fG][mA][mA][mA][fU][mC][mC]






[mU][mU][mG][mAs][mGs][mG]






NR1H3-1211-
Artificial
Modified
[MePhosphonate-4O-
1053


1231-1308
Sequence
antisense
mUs][fGs][fUs][fU][fA][mU][fA][mA]





strand
[mC][fU][mG][mA][mA][fA][mU][mC]






[mC][mU][mU][mGs][mGs][mG]






NR1H3-1212-
Artificial
Modified
[MePhosphonate-4O-
1054


1232-1309
Sequence
antisense
mUs][fGs][fGs][fU][fU][mA][fU][mA]





strand
[mA][fC][mU][mG][mA][fA][mA][mU]






[mC][mC][mU][mUs][mGs][mG]






NR1H3-1213-
Artificial
Modified
[MePhosphonate-4O-
1055


1233-1310
Sequence
antisense
mUs][fCs][fGs][fG][fU][mU][fA][mU]





strand
[mA][fA][mC][mU][mG][fA][mA][mA]






[mU][mC][mC][mUs][mGs][mG]






NR1H3-1214-
Artificial
Modified
[MePhosphonate-4O-
1056


1234-1311
Sequence
antisense
mUs][fCs][fCs][fG][fG][mU][fU][mA]





strand
[mU][fA][mA][mC][mU][fG][mA][mA]






[mA][mU][mC][mCs][mGs][mG]






NR1H3-1220
Artificial
Modified
[MePhosphonate-4O-
1057



Sequence
antisense
mUs][fGs][fUs][fC][fU][mU][fC][mC]





strand
[mC][fG][mG][mU][mU][fA][mU][mA]






[mA][mC][mU][mGs][mGs][mG]






NR1H3-1221-
Artificial
Modified
[MePhosphonate-4O-
1058


1241-1318
Sequence
antisense
mUs][fAs][fGs][fU][fC][mU][fU][mC]





strand
[mC][fC][mG][mG][mU][fU][mA][mU]






[mA][mA][mC][mUs][mGs][mG]






NR1H3-1224-
Artificial
Modified
[MePhosphonate-4O-
1059


1244
Sequence
antisense
mUs][fCs][fAs][fA][fA][mG][fU][mC]





strand
[mU][fU][mC][mC][mC][fG][mG][mU]






[mU][mA][mU][mAs][mGs][mG]






NR1H3-1244-
Artificial
Modified
[MePhosphonate-4O-
1060


1264
Sequence
antisense
mUs][fCs][fAs][fC][fU][mU][fG][mC]





strand
[mA][fG][mC][mC][mC][fU][mG][mC]






[mU][mU][mU][mGs][mGs][mG]






NR1H3-1249-
Artificial
Modified
[MePhosphonate-4O-
1061


1269-1346
Sequence
antisense
mUs][fAs][fAs][fU][fU][mC][fC][mA]





strand
[mC][fU][mU][mG][mC][fA][mG][mC]






[mC][mC][mU][mGs][mGs][mG]






NR1H3-1252-
Artificial
Modified
[MePhosphonate-4O-
1062


1272
Sequence
antisense
mUs][fAs][fUs][fG][fA][mA][fU][mU]





strand
[mC][fC][mA][mC][mU][fU][mG][mC]






[mA][mG][mC][mCs][mGs][mG]






NR1H3-1254-
Artificial
Modified
[MePhosphonate-4O-
1063


1274-1351
Sequence
antisense
mUs][fUs][fGs][fA][fU][mG][fA][mA]





strand
[mU][fU][mC][mC][mA][fC][mU][mU]






[mG][mC][mA][mGs][mGs][mG]






NR1H3-1255-
Artificial
Modified
[MePhosphonate-4O-
1064


1275-1352
Sequence
antisense
mUs][fUs][fUs][fG][fA][mU][fG][mA]





strand
[mA][fU][mU][mC][mC][fA][mC][mU]






[mU][mG][mC][mAs][mGs][mG]






NR1H3-1256-
Artificial
Modified
[MePhosphonate-4O-
1065


1276-1353
Sequence
antisense
mUs][fGs][fUs][fU][fG][mA][fU][mG]





strand
[mA][fA][mU][mU][mC][fC][mA][mC]






[mU][mU][mG][mCs][mGs][mG]






NR1H3-1257-
Artificial
Modified
[MePhosphonate-4O-
1066


1277-1354
Sequence
antisense
mUs][fGs][fGs][fU][fU][mG][fA][mU]





strand
[mG][fA][mA][mU][mU][fC][mC][mA]






[mC][mU][mU][mGs][mGs][mG]






NR1H3-1259
Artificial
Modified
[MePhosphonate-4O-
1067



Sequence
antisense
mUs][fGs][fGs][fG][fG][mU][fU][mG]





strand
[mA][fU][mG][mA][mA][fU][mU][mC]






[mC][mA][mC][mUs][mGs][mG]






NR1H3-1260-
Artificial
Modified
[MePhosphonate-4O-
1068


1280-1357
Sequence
antisense
mUs][fUs][fGs][fG][fG][mG][fU][mU]





strand
[mG][fA][mU][mG][mA][fA][mU][mU]






[mC][mC][mA][mCs][mGs][mG]






NR1H3-1261-
Artificial
Modified
[MePhosphonate-4O-
1069


1281-1358
Sequence
antisense
mUs][fAs][fUs][fG][fG][mG][fG][mU]





strand
[mU][fG][mA][mU][mG][fA][mA][mU]






[mU][mC][mC][mAs][mGs][mG]






NR1H3-1263-
Artificial
Modified
[MePhosphonate-4O-
1070


1283-1360
Sequence
antisense
mUs][fAs][fGs][fA][fU][mG][fG][mG]





strand
[mG][fU][mU][mG][mA][fU][mG][mA]






[mA][mU][mU][mCs][mGs][mG]






NR1H3-1264-
Artificial
Modified
[MePhosphonate-4O-
1071


1284-1361
Sequence
antisense
mUs][fAs][fAs][fG][fA][mU][fG][mG]





strand
[mG][fG][mU][mU][mG][fA][mU][mG]






[mA][mA][mU][mUs][mGs][mG]






NR1H3-1265-
Artificial
Modified
[MePhosphonate-4O-
1072


1285
Sequence
antisense
mUs][fGs][fAs][fA][fG][mA][fU][mG]





strand
[mG][fG][mG][mU][mU][fG][mA][mU]






[mG][mA][mA][mUs][mGs][mG]






NR1H3-1266-
Artificial
Modified
[MePhosphonate-4O-
1073


1286
Sequence
antisense
mUs][fCs][fGs][fA][fA][mG][fA][mU]





strand
[mG][fG][mG][mG][mU][fU][mG][mA]






[mU][mG][mA][mAs][mGs][mG]






NR1H3-1405-
Artificial
Modified
[MePhosphonate-4O-
1074


1471-1502
Sequence
antisense
mUs][fUs][fCs][fC][fA][mC][fA][mU]





strand
[mA][fU][mG][mU][mG][fU][mG][mC]






[mU][mG][mC][mAs][mGs][mG]






NR1H3-1409-
Artificial
Modified
[MePhosphonate-4O-
1075


1475-1506
Sequence
antisense
mUs][fGs][fGs][fC][fU][mU][fC][mC]





strand
[mA][fC][mA][mU][mA][fU][mG][mU]






[mG][mU][mG][mCs][mGs][mG]






NR1H3-1429-
Artificial
Modified
[MePhosphonate-4O-
1076


1495
Sequence
antisense
mUs][fAs][fUs][fG][fG][mA][fG][mA]





strand
[mC][fG][mU][mA][mG][fG][mC][mA]






[mU][mG][mC][mAs][mGs][mG]






NR1H3-1433-
Artificial
Modified
[MePhosphonate-4O-
1077


1499
Sequence
antisense
mUs][fGs][fUs][fG][fG][mA][fU][mG]





strand
[mG][fA][mG][mA][mC][fG][mU][mA]






[mG][mG][mC][mAs][mGs][mG]






NR1H3-1437-
Artificial
Modified
[MePhosphonate-4O-
1078


1503
Sequence
antisense
mUs][fGs][fAs][fU][fG][mG][fU][mG]





strand
[mG][fA][mU][mG][mG][fA][mG][mA]






[mC][mG][mU][mAs][mGs][mG]






NR1H3-1439-
Artificial
Modified
[MePhosphonate-4O-
1079


1505
Sequence
antisense
mUs][fGs][fGs][fG][fA][mU][fG][mG]





strand
[mU][fG][mG][mA][mU][fG][mG][mA]






[mG][mA][mC][mGs][mGs][mG]






NR1H3-1446-
Artificial
Modified
[MePhosphonate-4O-
1080


1512
Sequence
antisense
mUs][fGs][fGs][fU][fC][mA][fU][mG]





strand
[mG][fG][mG][mA][mU][fG][mG][mU]






[mG][mG][mA][mUs][mGs][mG]






NR1H3-1458-
Artificial
Modified
[MePhosphonate-4O-
1081


1524-1555
Sequence
antisense
mUs][fGs][fGs][fA][fA][mC][fA][mU]





strand
[mC][fA][mG][mU][mC][fG][mG][mU]






[mC][mA][mU][mGs][mGs][mG]






NR1H3-1463-
Artificial
Modified
[MePhosphonate-4O-
1082


1529
Sequence
antisense
mUs][fCs][fCs][fG][fU][mG][fG][mG]





strand
[mA][fA][mC][mA][mU][fC][mA][mG]






[mU][mC][mG][mGs][mGs][mG]






NR1H3-1464-
Artificial
Modified
[MePhosphonate-4O-
1083


1530-1561
Sequence
antisense
mUs][fUs][fCs][fC][fG][mU][fG][mG]





strand
[mG][fA][mA][mC][mA][fU][mC][mA]






[mG][mU][mC][mGs][mGs][mG]






NR1H3-1465-
Artificial
Modified
[MePhosphonate-4O-
1084


1531-1562
Sequence
antisense
mUs][fAs][fUs][fC][fC][mG][fU][mG]





strand
[mG][fG][mA][mA][mC][fA][mU][mC]






[mA][mG][mU][mCs][mGs][mG]






NR1H3-1467-
Artificial
Modified
[MePhosphonate-4O-
1085


1533-1564
Sequence
antisense
mUs][fGs][fCs][fA][fU][mC][fC][mG]





strand
[mU][fG][mG][mG][mA][fA][mC][mA]






[mU][mC][mA][mGs][mGs][mG]






NR1H3-1469-
Artificial
Modified
[MePhosphonate-4O-
1086


1535-1566
Sequence
antisense
mUs][fUs][fA][mG][fC][mA][fU][mC]





strand
[mC][fG][mU][mG][mG][fG][mA][mA]






[mC][mA][mU][mCs][mGs][mG]






NR1H3-1470-
Artificial
Modified
[MePhosphonate-4O-
1087


1536-1567
Sequence
antisense
mUs][fUs][fUs][fA][fG][mC][fA][mU]





strand
[mC][fC][mG][mU][mG][fG][mG][mA]






[mA][mC][mA][mUs][mGs][mG]






NR1H3-1475-
Artificial
Modified
[MePhosphonate-4O-
1088


1541
Sequence
antisense
mUs][fUs][fUs][fU][fC][mA][fU][mU]





strand
[mA][fG][mC][mA][mU][fC][mC][mG]






[mU][mG][mG][mGs][mGs][mG]






NR1H3-1479-
Artificial
Modified
[MePhosphonate-4O-
1089


1545
Sequence
antisense
mUs][fCs][fCs][fA][fG][mU][fU][mU]





strand
[mC][fA][mU][mU][mA][fG][mC][mA]






[mU][mC][mC][mGs][mGs][mG]






NR1H3-1480-
Artificial
Modified
[MePhosphonate-4O-
1090


1546-1577
Sequence
antisense
mUs][fAs][fCs][fC][fA][mG][fU][mU]





strand
[mU][fC][mA][mU][mU][fA][mG][mC]






[mA][mU][mC][mCs][mGs][mG]






NR1H3-1481-
Artificial
Modified
[MePhosphonate-4O-
1091


1547
Sequence
antisense
mUs][fCs][fAs][fC][fC][mA][fG][mU]





strand
[mU][fU][mC][mA][mU][fU][mA][mG]






[mC][mA][mU][mCs][mGs][mG]






NR1H3-1482-
Artificial
Modified
[MePhosphonate-4O-
1092


1548-1579
Sequence
antisense
mUs][fUs][fCs][fA][fC][mC][fA][mG]





strand
[mU][fU][mU][mC][mA][fU][mU][mA]






[mG][mC][mA][mUs][mGs][mG]






NR1H3-1485-
Artificial
Modified
[MePhosphonate-4O-
1093


1551
Sequence
antisense
mUs][fGs][fGs][fC][fU][mC][fA][mC]





strand
[mC][fA][mG][mU][mU][fU][mC][mA]






[mU][mU][mA][mGs][mGs][mG]






NR1H3-1515-
Artificial
Modified
[MePhosphonate-4O-
1094


1581
Sequence
antisense
mUs][fGs][fCs][fU][fC][mU][fG][mA]





strand
[mG][fU][mG][mG][mA][fC][mG][mC]






[mU][mG][mC][mUs][mGs][mG]






NR1H3-1517-
Artificial
Modified
[MePhosphonate-4O-
1095


1583
Sequence
antisense
mUs][fUs][fUs][fG][fC][mU][fC][mU]





strand
[mG][fA][mG][mU][mG][fG][mA][mC]






[mG][mC][mU][mGs][mGs][mG]






NR1H3-1518-
Artificial
Modified
[MePhosphonate-4O-
1096


1584
Sequence
antisense
mUs][fCs][fUs][fU][fG][mC][fU][mC]





strand
[mU][fG][mA][mG][mU][fG][mG][mA]






[mC][mG][mC][mUs][mGs][mG]






NR1H3-1524-
Artificial
Modified
[MePhosphonate-4O-
1097


1590-1621
Sequence
antisense
mUs][fCs][fAs][fA][fA][mC][fA][mC]





strand
[mU][fU][mG][mC][mU][fC][mU][mG]






[mA][mG][mU][mGs][mGs][mG]






NR1H3-1533-
Artificial
Modified
[MePhosphonate-4O-
1098


1599
Sequence
antisense
mUs][fGs][fAs][fC][fG][mC][fA][mG]





strand
[mU][fG][mC][mA][mA][fA][mC][mA]






[mC][mU][mU][mGs][mGs][mG]






NR1H3-1535-
Artificial
Modified
[MePhosphonate-4O-
1099


1601
Sequence
antisense
mUs][fCs][fAs][fG][fA][mC][fG][mC]





strand
[mA][fG][mU][mG][mC][fA][mA][mA]






[mC][mA][mC][mUs][mGs][mG]






NR1H3-1545-
Artificial
Modified
[MePhosphonate-4O-
1100


1611
Sequence
antisense
mUs][fUs][fUs][fU][fU][mG][fU][mC]





strand
[mC][fU][mG][mC][mA][fG][mA][mC]






[mG][mC][mA][mGs][mGs][mG]






NR1H3-1554-
Artificial
Modified
[MePhosphonate-4O-
1101


1620
Sequence
antisense
mUs][fGs][fUs][fG][fG][mG][fA][mG]





strand
[mC][fU][mU][mU][mU][fU][mG][mU]






[mC][mC][mU][mGs][mGs][mG]






NR1H3-1581-
Artificial
Modified
[MePhosphonate-4O-
1102


1647
Sequence
antisense
mUs][fGs][fCs][fA][fC][mA][fU][mC]





strand
[mC][fC][mA][mG][mA][fU][mC][mU]






[mC][mA][mG][mAs][mGs][mG]






NR1H3-1586-
Artificial
Modified
[MePhosphonate-4O-
1103


1652
Sequence
antisense
mUs][fUs][fUs][fC][fG][mU][fG][mC]





strand
[mA][fC][mA][mU][mC][fC][mC][mA]






[mG][mA][mU][mCs][mGs][mG]






NR1H3-1587-
Artificial
Modified
[MePhosphonate-4O-
1104


1653
Sequence
antisense
mUs][fAs][fUs][fU][fC][mG][fU][mG]





strand
[mC][fA][mC][mA][mU][fC][mC][mC]






[mA][mG][mA][mUs][mGs][mG]






NR1H3-1588-
Artificial
Modified
[MePhosphonate-4O-
1105


1654
Sequence
antisense
mUs][fCs][fAs][fU][fU][mC][fG][mU]





strand
[mG][fC][mA][mC][mA][fU][mC][mC]






[mC][mA][mG][mAs][mGs][mG]






NR1H3-1594-
Artificial
Modified
[MePhosphonate-4O-
1106


1660-1691
Sequence
antisense
mUs][fAs][fAs][fC][fA][mG][fU][mC]





strand
[mA][fU][mU][mC][mG][fU][mG][mC]






[mA][mC][mA][mUs][mGs][mG]






NR1H3-1595-
Artificial
Modified
[MePhosphonate-4O-
1107


1661-1692
Sequence
antisense
mUs][fGs][fAs][fA][fC][mA][fG][mU]





strand
[mC][fA][mU][mU][mC][fG][mU][mG]






[mC][mA][mC][mAs][mGs][mG]






NR1H3-1596-
Artificial
Modified
[MePhosphonate-4O-
1108


1662
Sequence
antisense
mUs][fAs][fGs][fA][fA][mC][fA][mG]





strand
[mU][fC][mA][mU][mU][fC][mG][mU]






[mG][mC][mA][mCs][mGs][mG]






NR1H3-1663-
Artificial
Modified
[MePhosphonate-4O-
1109


1727
Sequence
antisense
mUs][fGs][fUs][fU][fC][mC][fA][mC]





strand
[mU][fU][mC][mU][mA][fG][mG][mA]






[mG][mG][mC][mAs][mGs][mG]






NR1H3-1670-
Artificial
Modified
[MePhosphonate-4O-
1110


1734
Sequence
antisense
mUs][fUs][fCs][fA][fG][mU][fC][mU]





strand
[mG][fU][mU][mC][mC][fA][mC][mU]






[mU][mC][mU][mAs][mGs][mG]






NR1H3-1671-
Artificial
Modified
[MePhosphonate-4O-
1111


1735
Sequence
antisense
mUs][fCs][fUs][fC][fA][mG][fU][mC]





strand
[mU][fG][mU][mU][mC][fC][mA][mC]






[mU][mU][mC][mUs][mGs][mG]






NR1H3-1672-
Artificial
Modified
[MePhosphonate-4O-
1112


1736
Sequence
antisense
mUs][fUs][fCs][fU][fC][mA][fG][mU]





strand
[mC][fU][mG][mU][mU][fC][mC][mA]






[mC][mU][mU][mCs][mGs][mG]






NR1H3-1673-
Artificial
Modified
[MePhosphonate-4O-
1113


1737
Sequence
antisense
mUs][fUs][fUs][fC][fU][mC][fA][mG]





strand
[mU][fC][mU][mG][mU][fU][mC][mC]






[mA][mC][mU][mUs][mGs][mG]






NR1H3-1674-
Artificial
Modified
[MePhosphonate-4O-
1114


1738
Sequence
antisense
mUs][fCs][fUs][fU][fC][mU][fC][mA]





strand
[mG][fU][mC][mU][mG][fU][mU][mC]






[mC][mA][mC][mUs][mGs][mG]






NR1H3-1675-
Artificial
Modified
[MePhosphonate-4O-
1115


1739-1766
Sequence
antisense
mUs][fCs][fCs][fU][fU][mC][fU][mC]





strand
[mA][fG][mU][mC][mU][fG][mU][mU]






[mC][mC][mA][mCs][mGs][mG]






NR1H3-1676-
Artificial
Modified
[MePhosphonate-4O-
1116


1740-1767
Sequence
antisense
mUs][fCs][fCs][fC][fU][mU][fC][mU]





strand
[mC][fA][mG][mU][mC][fU][mG][mU]






[mU][mC][mC][mAs][mGs][mG]






NR1H3-1678-
Artificial
Modified
[MePhosphonate-4O-
1117


1742-1769
Sequence
antisense
mUs][fUs][fGs][fC][fC][mC][fU][mU]





strand
[mC][fU][mC][mA][mG][fU][mC][mU]






[mG][mU][mU][mCs][mGs][mG]






NR1H3-1684-
Artificial
Modified
[MePhosphonate-4O-
1118


1748
Sequence
antisense
mUs][fAs][fAs][fU][fG][mU][fU][mU]





strand
[mG][fC][mC][mC][mU][fU][mC][mU]






[mC][mA][mG][mUs][mGs][mG]






NR1H3-1731-
Artificial
Modified
[MePhosphonate-4O-
1119


1795
Sequence
antisense
mUs][fGs][fAs][fC][fU][mC][fU][mC]





strand
[mU][fU][mU][mU][mA][fA][mU][mG]






[mC][mC][mA][mCs][mGs][mG]






NR1H3-1732-
Artificial
Modified
[MePhosphonate-4O-
1120


1796
Sequence
antisense
mUs][fUs][fGs][fA][fC][mU][fC][mU]





strand
[mC][fU][mU][mU][mU][fA][mA][mU]






[mG][mC][mC][mAs][mGs][mG]






Stem-loop
Artificial

GCAGCCGAAAGGCUGC
1121



Sequence








Forward-1198
Artificial

GTTATAACCGGGAAGACTTTGC
1122



Sequence








Reverse-1326
Artificial

TGATAGCAATGAGCAAGGCA
1123



Sequence








Probe-1253
Artificial

ATGGCCCTGGAGAACTCGAAGAT
1124



Sequence

G






NR1H3-764-
Hs-Mf-
19 mer sense
UGUCCUGUCAGAAGAACAG
1125


784-861
Mm
strand







NR1H3-766-
Hs-Mf-
19 mer sense
UCCUGUCAGAAGAACAGAU
1126


786-863
Mm
strand







NR1H3-789-
Hs-Mf-
19 mer sense
CUGAAGAAACUGAAGCGGC
1127


809-886
Mm
strand







NR1H3-790-
Hs-Mf-
19 mer sense
UGAAGAAACUGAAGCGGCA
1128


810-887
Mm
strand







NR1H3-791-
Hs-Mf-
19 mer sense
GAAGAAACUGAAGCGGCAA
1129


811-888
Mm
strand







NR1H3-792-
Hs-Mf-
19 mer sense
AAGAAACUGAAGCGGCAAG
1130


812-889
Mm
strand







NR1H3-793-
Hs-Mf-
19 mer sense
AGAAACUGAAGCGGCAAGA
1131


813-890
Mm
strand







NR1H3-795-
Hs-Mf-
19 mer sense
AAACUGAAGCGGCAAGAGG
1132


815-892
Mm
strand







NR1H3-796-
Hs-Mf-
19 mer sense
AACUGAAGCGGCAAGAGGA
1133


816-893
Mm
strand







NR1H3-797-
Hs-Mf-
19 mer sense
ACUGAAGCGGCAAGAGGAG
1134


817-894
Mm
strand







NR1H3-798-
Hs-Mf-
19 mer sense
CUGAAGCGGCAAGAGGAGG
1135


818-895
Mm
strand







NR1H3-799-
Hs-Mf-
19 mer sense
UGAAGCGGCAAGAGGAGGA
1136


819-896
Mm
strand







NR1H3-802-
Hs-Mf-
19 mer sense
AGCGGCAAGAGGAGGAACA
1137


822-899
Mm
strand







NR1H3-803-
Hs-Mf-
19 mer sense
GCGGCAAGAGGAGGAACAG
1138


823-900
Mm
strand







NR1H3-804-
Hs-Mf-
19 mer sense
CGGCAAGAGGAGGAACAGG
1139


824-901
Mm
strand







NR1H3-806-
Hs-Mf-
19 mer sense
GCAAGAGGAGGAACAGGCU
1140


826-903
Mm
strand







NR1H3-808-
Hs-Mf-
19 mer sense
AAGAGGAGGAACAGGCUCA
1141


828-905
Mm
strand







NR1H3-809-
Hs-Mf-
19 mer sense
AGAGGAGGAACAGGCUCAU
1142


829-906
Mm
strand







NR1H3-810-
Hs-Mf-
19 mer sense
GAGGAGGAACAGGCUCAUG
1143


830-907
Mm
strand







NR1H3-811-
Hs-Mf-
19 mer sense
AGGAGGAACAGGCUCAUGC
1144


831-908
Mm
strand







NR1H3-813-
Hs-Mf-
19 mer sense
GAGGAACAGGCUCAUGCCA
1145


833-910
Mm
strand







NR1H3-844-
Hs-Mf
19 mer sense
CCAGGGCUUCCUCACCCCC
1146


864

strand







NR1H3-895-
Hs-Mf-
19 mer sense
UGGGCAUGAUCGAGAAGCU
1147


915-992
Mm
strand







NR1H3-898-
Hs-Mf-
19 mer sense
GCAUGAUCGAGAAGCUCGU
1148


918-995
Mm
strand







NR1H3-915-
Hs-Mf-
19 mer sense
GUCGCUGCCCAGCAACAGU
1149


935-1012
Mm
strand







NR1H3-917-
Hs-Mf-
19 mer sense
CGCUGCCCAGCAACAGUGU
1150


937-1014
Mm
strand







NR1H3-922-
Hs-Mf-
19 mer sense
CCCAGCAACAGUGUAACCG
1151


942-1019
Mm
strand







NR1H3-924-
Hs-Mf-
19 mer sense
CAGCAACAGUGUAACCGGC
1152


944-1021
Mm
strand







NR1H3-925-
Hs-Mf-
19 mer sense
AGCAACAGUGUAACCGGCG
1153


945-1022
Mm
strand







NR1H3-927-
Hs-Mf-
19 mer sense
CAACAGUGUAACCGGCGCU
1154


947-1024
Mm
strand







NR1H3-928-
Hs-Mf-
19 mer sense
AACAGUGUAACCGGCGCUC
1155


948-1025
Mm
strand







NR1H3-929-
Hs-Mf-
19 mer sense
ACAGUGUAACCGGCGCUCC
1156


949-1026
Mm
strand







NR1H3-930-
Hs-Mf-
19 mer sense
CAGUGUAACCGGCGCUCCU
1157


950-1027
Mm
strand







NR1H3-931-
Hs-Mf-
19 mer sense
AGUGUAACCGGCGCUCCUU
1158


951-1028
Mm
strand







NR1H3-932-
Hs-Mf-
19 mer sense
GUGUAACCGGCGCUCCUUU
1159


952-1029
Mm
strand







NR1H3-933-
Hs-Mf-
19 mer sense
UGUAACCGGCGCUCCUUUU
1160


953-1030
Mm
strand







NR1H3-941-
Hs-Mf
19 mer sense
GCGCUCCUUUUCUGACCGG
1161


961

strand







NR1H3-944-
Hs-Mf
19 mer sense
CUCCUUUUCUGACCGGCUU
1162


964

strand







NR1H3-945-
Hs-Mf
19 mer sense
UCCUUUUCUGACCGGCUUC
1163


965

strand







NR1H3-946-
Hs-Mf
19 mer sense
CCUUUUCUGACCGGCUUCG
1164


966

strand







NR1H3-947-
Hs-Mf
19 mer sense
CUUUUCUGACCGGCUUCGA
1165


967

strand







NR1H3-949-
Hs-Mf
19 mer sense
UUUCUGACCGGCUUCGAGU
1166


969

strand







NR1H3-951-
Hs-Mf
19 mer sense
UCUGACCGGCUUCGAGUCA
1167


971

strand







NR1H3-952-
Hs-Mf
19 mer sense
CUGACCGGCUUCGAGUCAC
1168


972

strand







NR1H3-953-
Hs-Mf
19 mer sense
UGACCGGCUUCGAGUCACG
1169


973

strand







NR1H3-1151-
Hs-Mf-
19 mer sense
GGUGAUGCUUCUGGAGACA
1170


1171-1248
Mm
strand







NR1H3-1153-
Hs-Mf-
19 mer sense
UGAUGCUUCUGGAGACAUC
1171


1173-1250
Mm
strand







NR1H3-1154-
Hs-Mf-
19 mer sense
GAUGCUUCUGGAGACAUCU
1172


1174-1251
Mm
strand







NR1H3-1155-
Hs-Mf-
19 mer sense
AUGCUUCUGGAGACAUCUC
1173


1175-1252
Mm
strand







NR1H3-1156-
Hs-Mf-
19 mer sense
UGCUUCUGGAGACAUCUCG
1174


1176-1253
Mm
strand







NR1H3-1157-
Hs-Mf-
19 mer sense
GCUUCUGGAGACAUCUCGG
1175


1177-1254
Mm
strand







NR1H3-1158-
Hs-Mf-
19 mer sense
CUUCUGGAGACAUCUCGGA
1176


1178-1255
Mm
strand







NR1H3-1159-
Hs-Mf-
19 mer sense
UUCUGGAGACAUCUCGGAG
1177


1179-1256
Mm
strand







NR1H3-1160-
Hs-Mf-
19 mer sense
UCUGGAGACAUCUCGGAGG
1178


1180-1257
Mm
strand







NR1H3-1161-
Hs-Mf-
19 mer sense
CUGGAGACAUCUCGGAGGU
1179


1181-1258
Mm
strand







NR1H3-1162-
Hs-Mf-
19 mer sense
UGGAGACAUCUCGGAGGUA
1180


1182-1259
Mm
strand







NR1H3-1163-
Hs-Mf-
19 mer sense
GGAGACAUCUCGGAGGUAC
1181


1183-1260
Mm
strand







NR1H3-1164-
Hs-Mf-
19 mer sense
GAGACAUCUCGGAGGUACA
1182


1184-1261
Mm
strand







NR1H3-1165-
Hs-Mf-
19 mer sense
AGACAUCUCGGAGGUACAA
1183


1185-1262
Mm
strand







NR1H3-1166-
Hs-Mf-
19 mer sense
GACAUCUCGGAGGUACAAC
1184


1186-1263
Mm
strand







NR1H3-1167-
Hs-Mf-
19 mer sense
ACAUCUCGGAGGUACAACC
1185


1187-1264
Mm
strand







NR1H3-1169-
Hs-Mf-
19 mer sense
AUCUCGGAGGUACAACCCU
1186


1189-1266
Mm
strand







NR1H3-1170-
Hs-Mf-
19 mer sense
UCUCGGAGGUACAACCCUG
1187


1190-1267
Mm
strand







NR1H3-1171-
Hs-Mf-
19 mer sense
CUCGGAGGUACAACCCUGG
1188


1191-1268
Mm
strand







NR1H3-1173-
Hs-Mf-
19 mer sense
CGGAGGUACAACCCUGGGA
1189


1193-1270
Mm
strand







NR1H3-1175-
Hs-Mf-
19 mer sense
GAGGUACAACCCUGGGAGU
1190


1195-1272
Mm
strand







NR1H3-1176-
Hs-Mf-
19 mer sense
AGGUACAACCCUGGGAGUG
1191


1196-1273
Mm
strand







NR1H3-1177-
Hs-Mf-
19 mer sense
GGUACAACCCUGGGAGUGA
1192


1197-1274
Mm
strand







NR1H3-1178-
Hs-Mf-
19 mer sense
GUACAACCCUGGGAGUGAG
1193


1198-1275
Mm
strand







NR1H3-1179-
Hs-Mf-
19 mer sense
UACAACCCUGGGAGUGAGA
1194


1199-1276
Mm
strand







NR1H3-1180-
Hs-Mf-
19 mer sense
ACAACCCUGGGAGUGAGAG
1195


1200-1277
Mm
strand







NR1H3-1181-
Hs-Mf-
19 mer sense
CAACCCUGGGAGUGAGAGU
1196


1201-1278
Mm
strand







NR1H3-1182-
Hs-Mf-
19 mer sense
AACCCUGGGAGUGAGAGUA
1197


1202-1279
Mm
strand







NR1H3-1183-
Hs-Mf-
19 mer sense
ACCCUGGGAGUGAGAGUAU
1198


1203-1280
Mm
strand







NR1H3-1184-
Hs-Mf-
19 mer sense
CCCUGGGAGUGAGAGUAUC
1199


1204-1281
Mm
strand







NR1H3-1185-
Hs-Mf-
19 mer sense
CCUGGGAGUGAGAGUAUCA
1200


1205-1282
Mm
strand







NR1H3-1186-
Hs-Mf-
19 mer sense
CUGGGAGUGAGAGUAUCAC
1201


1206-1283
Mm
strand







NR1H3-1187-
Hs-Mf-
19 mer sense
UGGGAGUGAGAGUAUCACC
1202


1207-1284
Mm
strand







NR1H3-1188-
Hs-Mf-
19 mer sense
GGGAGUGAGAGUAUCACCU
1203


1208-1285
Mm
strand







NR1H3-1190-
Hs-Mf-
19 mer sense
GAGUGAGAGUAUCACCUUC
1204


1210-1287
Mm
strand







NR1H3-1191-
Hs-Mf-
19 mer sense
AGUGAGAGUAUCACCUUCC
1205


1211-1288
Mm
strand







NR1H3-1192-
Hs-Mf-
19 mer sense
GUGAGAGUAUCACCUUCCU
1206


1212-1289
Mm
strand







NR1H3-1193-
Hs-Mf-
19 mer sense
UGAGAGUAUCACCUUCCUC
1207


1213-1290
Mm
strand







NR1H3-1194-
Hs-Mf-
19 mer sense
GAGAGUAUCACCUUCCUCA
1208


1214-1291
Mm
strand







NR1H3-1196-
Hs-Mf-
19 mer sense
GAGUAUCACCUUCCUCAAG
1209


1216-1293
Mm
strand







NR1H3-1197-
Hs-Mf-
19 mer sense
AGUAUCACCUUCCUCAAGG
1210


1217-1294
Mm
strand







NR1H3-1198-
Hs-Mf-
19 mer sense
GUAUCACCUUCCUCAAGGA
1211


1218-1295
Mm
strand







NR1H3-1199-
Hs-Mf-
19 mer sense
UAUCACCUUCCUCAAGGAU
1212


1219-1296
Mm
strand







NR1H3-1200-
Hs-Mf-
19 mer sense
AUCACCUUCCUCAAGGAUU
1213


1220-1297
Mm
strand







NR1H3-1203-
Hs-Mf-
19 mer sense
ACCUUCCUCAAGGAUUUCA
1214


1223-1300
Mm
strand







NR1H3-1204-
Hs-Mf-
19 mer sense
CCUUCCUCAAGGAUUUCAG
1215


1224-1301
Mm
strand







NR1H3-1207-
Hs-Mf-
19 mer sense
UCCUCAAGGAUUUCAGUUA
1216


1227-1304
Mm
strand







NR1H3-1211-
Hs-Mf-
19 mer sense
CAAGGAUUUCAGUUAUAAC
1217


1231-1308
Mm
strand







NR1H3-1212-
Hs-Mf-
19 mer sense
AAGGAUUUCAGUUAUAACC
1218


1232-1309
Mm
strand







NR1H3-1213-
Hs-Mf-
19 mer sense
AGGAUUUCAGUUAUAACCG
1219


1233-1310
Mm
strand







NR1H3-1214-
Hs-Mf-
19 mer sense
GGAUUUCAGUUAUAACCGG
1220


1234-1311
Mm
strand







NR1H3-1215-
Hs-Mf-
19 mer sense
GAUUUCAGUUAUAACCGGG
1221


1235-1312
Mm
strand







NR1H3-1216-
Hs-Mf-
19 mer sense
AUUUCAGUUAUAACCGGGA
1222


1236-1313
Mm
strand







NR1H3-1217-
Hs-Mf-
19 mer sense
UUUCAGUUAUAACCGGGAA
1223


1237-1314
Mm
strand







NR1H3-1218-
Hs-Mf-
19 mer sense
UUCAGUUAUAACCGGGAAG
1224


1238-1315
Mm
strand







NR1H3-1219-
Hs-Mf-
19 mer sense
UCAGUUAUAACCGGGAAGA
1225


1239-1316
Mm
strand







NR1H3-1220-
Hs-Mf-
19 mer sense
CAGUUAUAACCGGGAAGAC
1226


1240-1317
Mm
strand







NR1H3-1222-
Hs-Mf-
19 mer sense
GUUAUAACCGGGAAGACUU
1227


1242-1319
Mm
strand







NR1H3-1223-
Hs-Mf-
19 mer sense
UUAUAACCGGGAAGACUUU
1228


1243-1320
Mm
strand







NR1H3-1224-
Hs-Mf-
19 mer sense
UAUAACCGGGAAGACUUUG
1229


1244-1321
Mm
strand







NR1H3-1225-
Hs-Mf-
19 mer sense
AUAACCGGGAAGACUUUGC
1230


1245-1322
Mm
strand







NR1H3-1226-
Hs-Mf-
19 mer sense
UAACCGGGAAGACUUUGCC
1231


1246-1323
Mm
strand







NR1H3-1227-
Hs-Mf-
19 mer sense
AACCGGGAAGACUUUGCCA
1232


1247-1324
Mm
strand







NR1H3-1228-
Hs-Mf-
19 mer sense
ACCGGGAAGACUUUGCCAA
1233


1248-1325
Mm
strand







NR1H3-1229-
Hs-Mf-
19 mer sense
CCGGGAAGACUUUGCCAAA
1234


1249-1326
Mm
strand







NR1H3-1232-
Hs-Mf-
19 mer sense
GGAAGACUUUGCCAAAGCA
1235


1252-1329
Mm
strand







NR1H3-1233-
Hs-Mf-
19 mer sense
GAAGACUUUGCCAAAGCAG
1236


1253-1330
Mm
strand







NR1H3-1234-
Hs-Mf-
19 mer sense
AAGACUUUGCCAAAGCAGG
1237


1254-1331
Mm
strand







NR1H3-1235-
Hs-Mf-
19 mer sense
AGACUUUGCCAAAGCAGGG
1238


1255-1332
Mm
strand







NR1H3-1236-
Hs-Mf-
19 mer sense
GACUUUGCCAAAGCAGGGC
1239


1256-1333
Mm
strand







NR1H3-1237-
Hs-Mf-
19 mer sense
ACUUUGCCAAAGCAGGGCU
1240


1257-1334
Mm
strand







NR1H3-1238-
Hs-Mf-
19 mer sense
CUUUGCCAAAGCAGGGCUG
1241


1258-1335
Mm
strand







NR1H3-1241-
Hs-Mf-
19 mer sense
UGCCAAAGCAGGGCUGCAA
1242


1261-1338
Mm
strand







NR1H3-1242-
Hs-Mf-
19 mer sense
GCCAAAGCAGGGCUGCAAG
1243


1262-1339
Mm
strand







NR1H3-1243-
Hs-Mf-
19 mer sense
CCAAAGCAGGGCUGCAAGU
1244


1263-1340
Mm
strand







NR1H3-1244-
Hs-Mf-
19 mer sense
CAAAGCAGGGCUGCAAGUG
1245


1264-1341
Mm
strand







NR1H3-1245-
Hs-Mf-
19 mer sense
AAAGCAGGGCUGCAAGUGG
1246


1265-1342
Mm
strand







NR1H3-1246-
Hs-Mf-
19 mer sense
AAGCAGGGCUGCAAGUGGA
1247


1266-1343
Mm
strand







NR1H3-1247-
Hs-Mf-
19 mer sense
AGCAGGGCUGCAAGUGGAA
1248


1267-1344
Mm
strand







NR1H3-1248-
Hs-Mf-
19 mer sense
GCAGGGCUGCAAGUGGAAU
1249


1268-1345
Mm
strand







NR1H3-1250-
Hs-Mf-
19 mer sense
AGGGCUGCAAGUGGAAUUC
1250


1270-1347
Mm
strand







NR1H3-1251-
Hs-Mf-
19 mer sense
GGGCUGCAAGUGGAAUUCA
1251


1271-1348
Mm
strand







NR1H3-1252-
Hs-Mf-
19 mer sense
GGCUGCAAGUGGAAUUCAU
1252


1272-1349
Mm
strand







NR1H3-1253-
Hs-Mf-
19 mer sense
GCUGCAAGUGGAAUUCAUC
1253


1273-1350
Mm
strand







NR1H3-1256-
Hs-Mf-
19 mer sense
GCAAGUGGAAUUCAUCAAC
1254


1276-1353
Mm
strand







NR1H3-1258-
Hs-Mf-
19 mer sense
AAGUGGAAUUCAUCAACCC
1255


1278-1355
Mm
strand







NR1H3-1259-
Hs-Mf-
19 mer sense
AGUGGAAUUCAUCAACCCC
1256


1279-1356
Mm
strand







NR1H3-1261-
Hs-Mf-
19 mer sense
UGGAAUUCAUCAACCCCAU
1257


1281-1358
Mm
strand







NR1H3-1262-
Hs-Mf-
19 mer sense
GGAAUUCAUCAACCCCAUC
1258


1282-1359
Mm
strand







NR1H3-1265-
Hs-Mf-
19 mer sense
AUUCAUCAACCCCAUCUUC
1259


1285-1362
Mm
strand







NR1H3-1266-
Hs-Mf-
19 mer sense
UUCAUCAACCCCAUCUUCG
1260


1286-1363
Mm
strand







NR1H3-1267-
Hs-Mf-
19 mer sense
UCAUCAACCCCAUCUUCGA
1261


1287-1364
Mm
strand







NR1H3-1268-
Hs-Mf-
19 mer sense
CAUCAACCCCAUCUUCGAG
1262


1288-1365
Mm
strand







NR1H3-1269-
Hs-Mf-
19 mer sense
AUCAACCCCAUCUUCGAGU
1263


1289-1366
Mm
strand







NR1H3-1270-
Hs-Mf-
19 mer sense
UCAACCCCAUCUUCGAGUU
1264


1290-1367
Mm
strand







NR1H3-1271-
Hs-Mf-
19 mer sense
CAACCCCAUCUUCGAGUUC
1265


1291-1368
Mm
strand







NR1H3-1272-
Hs-Mf-
19 mer sense
AACCCCAUCUUCGAGUUCU
1266


1292-1369
Mm
strand







NR1H3-1273-
Hs-Mf-
19 mer sense
ACCCCAUCUUCGAGUUCUC
1267


1293-1370
Mm
strand







NR1H3-1275-
Hs-Mf-
19 mer sense
CCCAUCUUCGAGUUCUCCA
1268


1295-1372
Mm
strand







NR1H3-1276-
Hs-Mf-
19 mer sense
CCAUCUUCGAGUUCUCCAG
1269


1296-1373
Mm
strand







NR1H3-1277-
Hs-Mf-
19 mer sense
CAUCUUCGAGUUCUCCAGG
1270


1297-1374
Mm
strand







NR1H3-1278-
Hs-Mf-
19 mer sense
AUCUUCGAGUUCUCCAGGG
1271


1298-1375
Mm
strand







NR1H3-1279-
Hs-Mf-
19 mer sense
UCUUCGAGUUCUCCAGGGC
1272


1299-1376
Mm
strand







NR1H3-1280-
Hs-Mf-
19 mer sense
CUUCGAGUUCUCCAGGGCC
1273


1300-1377
Mm
strand







NR1H3-1281-
Hs-Mf-
19 mer sense
UUCGAGUUCUCCAGGGCCA
1274


1301-1378
Mm
strand







NR1H3-1282-
Hs-Mf-
19 mer sense
UCGAGUUCUCCAGGGCCAU
1275


1302-1379
Mm
strand







NR1H3-1283-
Hs-Mf-
19 mer sense
CGAGUUCUCCAGGGCCAUG
1276


1303-1380
Mm
strand







NR1H3-1284-
Hs-Mf-
19 mer sense
GAGUUCUCCAGGGCCAUGA
1277


1304-1381
Mm
strand







NR1H3-1285-
Hs-Mf-
19 mer sense
AGUUCUCCAGGGCCAUGAA
1278


1305-1382
Mm
strand







NR1H3-1286-
Hs-Mf-
19 mer sense
GUUCUCCAGGGCCAUGAAU
1279


1306-1383
Mm
strand







NR1H3-1288-
Hs-Mf-
19 mer sense
UCUCCAGGGCCAUGAAUGA
1280


1308-1385
Mm
strand







NR1H3-1289-
Hs-Mf-
19 mer sense
CUCCAGGGCCAUGAAUGAG
1281


1309-1386
Mm
strand







NR1H3-1290-
Hs-Mf-
19 mer sense
UCCAGGGCCAUGAAUGAGC
1282


1310-1387
Mm
strand







NR1H3-1291-
Hs-Mf-
19 mer sense
CCAGGGCCAUGAAUGAGCU
1283


1311-1388
Mm
strand







NR1H3-1292-
Hs-Mf-
19 mer sense
CAGGGCCAUGAAUGAGCUG
1284


1312-1389
Mm
strand







NR1H3-1293-
Hs-Mf-
19 mer sense
AGGGCCAUGAAUGAGCUGC
1285


1313-1390
Mm
strand







NR1H3-1294-
Hs-Mf-
19 mer sense
GGGCCAUGAAUGAGCUGCA
1286


1314-1391
Mm
strand







NR1H3-1295-
Hs-Mf-
19 mer sense
GGCCAUGAAUGAGCUGCAA
1287


1315-1392
Mm
strand







NR1H3-1296-
Hs-Mf-
19 mer sense
GCCAUGAAUGAGCUGCAAC
1288


1316-1393
Mm
strand







NR1H3-1297-
Hs-Mf-
19 mer sense
CCAUGAAUGAGCUGCAACU
1289


1317-1394
Mm
strand







NR1H3-1338-
Hs-Mf-
19 mer sense
CUCAUUGCUAUCAGCAUCU
1290


1358-1435
Mm
strand







NR1H3-1339-
Hs-Mf-
19 mer sense
UCAUUGCUAUCAGCAUCUU
1291


1359-1436
Mm
strand







NR1H3-1340-
Hs-Mf-
19 mer sense
CAUUGCUAUCAGCAUCUUC
1292


1360-1437
Mm
strand







NR1H3-1341-
Hs-Mf-
19 mer sense
AUUGCUAUCAGCAUCUUCU
1293


1361-1438
Mm
strand







NR1H3-1342-
Hs-Mf-
19 mer sense
UUGCUAUCAGCAUCUUCUC
1294


1362-1439
Mm
strand







NR1H3-1343-
Hs-Mf-
19 mer sense
UGCUAUCAGCAUCUUCUCU
1295


1363-1440
Mm
strand







NR1H3-1344-
Hs-Mf-
19 mer sense
GCUAUCAGCAUCUUCUCUG
1296


1364-1441
Mm
strand







NR1H3-1345-
Hs-Mf-
19 mer sense
CUAUCAGCAUCUUCUCUGC
1297


1365-1442
Mm
strand







NR1H3-1346-
Hs-Mf-
19 mer sense
UAUCAGCAUCUUCUCUGCA
1298


1366-1443
Mm
strand







NR1H3-1347-
Hs-Mf-
19 mer sense
AUCAGCAUCUUCUCUGCAG
1299


1367-1444
Mm
strand







NR1H3-1377-
Hs-Mf-
19 mer sense
GUGCAGGACCAGCUCCAGG
1300


1443-1474
Mm
strand







NR1H3-1379-
Hs-Mf-
19 mer sense
GCAGGACCAGCUCCAGGUA
1301


1445-1476
Mm
strand







NR1H3-1383-
Hs-Mf-
19 mer sense
GACCAGCUCCAGGUAGAGA
1302


1449-1480
Mm
strand







NR1H3-1384-
Hs-Mf-
19 mer sense
ACCAGCUCCAGGUAGAGAG
1303


1450-1481
Mm
strand







NR1H3-1385-
Hs-Mf-
19 mer sense
CCAGCUCCAGGUAGAGAGG
1304


1451-1482
Mm
strand







NR1H3-1387-
Hs-Mf-
19 mer sense
AGCUCCAGGUAGAGAGGCU
1305


1453-1484
Mm
strand







NR1H3-1388-
Hs-Mf-
19 mer sense
GCUCCAGGUAGAGAGGCUG
1306


1454-1485
Mm
strand







NR1H3-1391-
Hs-Mf-
19 mer sense
CCAGGUAGAGAGGCUGCAG
1307


1457-1488
Mm
strand







NR1H3-1393-
Hs-Mf-
19 mer sense
AGGUAGAGAGGCUGCAGCA
1308


1459-1490
Mm
strand







NR1H3-1394-
Hs-Mf-
19 mer sense
GGUAGAGAGGCUGCAGCAC
1309


1460-1491
Mm
strand







NR1H3-1395-
Hs-Mf-
19 mer sense
GUAGAGAGGCUGCAGCACA
1310


1461-1492
Mm
strand







NR1H3-1396-
Hs-Mf-
19 mer sense
UAGAGAGGCUGCAGCACAC
1311


1462-1493
Mm
strand







NR1H3-1397-
Hs-Mf-
19 mer sense
AGAGAGGCUGCAGCACACA
1312


1463-1494
Mm
strand







NR1H3-1398-
Hs-Mf-
19 mer sense
GAGAGGCUGCAGCACACAU
1313


1464-1495
Mm
strand







NR1H3-1399-
Hs-Mf-
19 mer sense
AGAGGCUGCAGCACACAUA
1314


1465-1496
Mm
strand







NR1H3-1400-
Hs-Mf-
19 mer sense
GAGGCUGCAGCACACAUAU
1315


1466-1497
Mm
strand







NR1H3-1401-
Hs-Mf-
19 mer sense
AGGCUGCAGCACACAUAUG
1316


1467-1498
Mm
strand







NR1H3-1402-
Hs-Mf-
19 mer sense
GGCUGCAGCACACAUAUGU
1317


1468-1499
Mm
strand







NR1H3-1403-
Hs-Mf-
19 mer sense
GCUGCAGCACACAUAUGUG
1318


1469-1500
Mm
strand







NR1H3-1404-
Hs-Mf-
19 mer sense
CUGCAGCACACAUAUGUGG
1319


1470-1501
Mm
strand







NR1H3-1406-
Hs-Mf-
19 mer sense
GCAGCACACAUAUGUGGAA
1320


1472-1503
Mm
strand







NR1H3-1407-
Hs-Mf-
19 mer sense
CAGCACACAUAUGUGGAAG
1321


1473-1504
Mm
strand







NR1H3-1408-
Hs-Mf-
19 mer sense
AGCACACAUAUGUGGAAGC
1322


1474-1505
Mm
strand







NR1H3-1410-
Hs-Mf-
19 mer sense
CACACAUAUGUGGAAGCCC
1323


1476-1507
Mm
strand







NR1H3-1411-
Hs-Mf-
19 mer sense
ACACAUAUGUGGAAGCCCU
1324


1477-1508
Mm
strand







NR1H3-1412-
Hs-Mf-
19 mer sense
CACAUAUGUGGAAGCCCUG
1325


1478-1509
Mm
strand







NR1H3-1413-
Hs-Mf-
19 mer sense
ACAUAUGUGGAAGCCCUGC
1326


1479-1510
Mm
strand







NR1H3-1414-
Hs-Mf-
19 mer sense
CAUAUGUGGAAGCCCUGCA
1327


1480-1511
Mm
strand







NR1H3-1415-
Hs-Mf-
19 mer sense
AUAUGUGGAAGCCCUGCAU
1328


1481-1512
Mm
strand







NR1H3-1416-
Hs-Mf-
19 mer sense
UAUGUGGAAGCCCUGCAUG
1329


1482-1513
Mm
strand







NR1H3-1417-
Hs-Mf-
19 mer sense
AUGUGGAAGCCCUGCAUGC
1330


1483-1514
Mm
strand







NR1H3-1418-
Hs-Mf-
19 mer sense
UGUGGAAGCCCUGCAUGCC
1331


1484-1515
Mm
strand







NR1H3-1419-
Hs-Mf-
19 mer sense
GUGGAAGCCCUGCAUGCCU
1332


1485-1516
Mm
strand







NR1H3-1420-
Hs-Mf-
19 mer sense
UGGAAGCCCUGCAUGCCUA
1333


1486-1517
Mm
strand







NR1H3-1421-
Hs-Mf-
19 mer sense
GGAAGCCCUGCAUGCCUAC
1334


1487-1518
Mm
strand







NR1H3-1422-
Hs-Mf-
19 mer sense
GAAGCCCUGCAUGCCUACG
1335


1488-1519
Mm
strand







NR1H3-1423-
Hs-Mf-
19 mer sense
AAGCCCUGCAUGCCUACGU
1336


1489-1520
Mm
strand







NR1H3-1424-
Hs-Mf-
19 mer sense
AGCCCUGCAUGCCUACGUC
1337


1490-1521
Mm
strand







NR1H3-1425-
Hs-Mf-
19 mer sense
GCCCUGCAUGCCUACGUCU
1338


1491-1522
Mm
strand







NR1H3-1426-
Hs-Mf-
19 mer sense
CCCUGCAUGCCUACGUCUC
1339


1492-1523
Mm
strand







NR1H3-1427-
Hs-Mf-
19 mer sense
CCUGCAUGCCUACGUCUCC
1340


1493-1524
Mm
strand







NR1H3-1428-
Hs-Mf-
19 mer sense
CUGCAUGCCUACGUCUCCA
1341


1494-1525
Mm
strand







NR1H3-1429-
Hs-Mf-
19 mer sense
UGCAUGCCUACGUCUCCAU
1342


1495-1526
Mm
strand







NR1H3-1430-
Hs-Mf-
19 mer sense
GCAUGCCUACGUCUCCAUC
1343


1496-1527
Mm
strand







NR1H3-1431-
Hs-Mf-
19 mer sense
CAUGCCUACGUCUCCAUCC
1344


1497-1528
Mm
strand







NR1H3-1432-
Hs-Mf-
19 mer sense
AUGCCUACGUCUCCAUCCA
1345


1498-1529
Mm
strand







NR1H3-1433-
Hs-Mf-
19 mer sense
UGCCUACGUCUCCAUCCAC
1346


1499-1530
Mm
strand







NR1H3-1434-
Hs-Mf-
19 mer sense
GCCUACGUCUCCAUCCACC
1347


1500-1531
Mm
strand







NR1H3-1435-
Hs-Mf-
19 mer sense
CCUACGUCUCCAUCCACCA
1348


1501-1532
Mm
strand







NR1H3-1436-
Hs-Mf-
19 mer sense
CUACGUCUCCAUCCACCAU
1349


1502-1533
Mm
strand







NR1H3-1437-
Hs-Mf-
19 mer sense
UACGUCUCCAUCCACCAUC
1350


1503-1534
Mm
strand







NR1H3-1438-
Hs-Mf-
19 mer sense
ACGUCUCCAUCCACCAUCC
1351


1504-1535
Mm
strand







NR1H3-1439-
Hs-Mf-
19 mer sense
CGUCUCCAUCCACCAUCCC
1352


1505-1536
Mm
strand







NR1H3-1440-
Hs-Mf-
19 mer sense
GUCUCCAUCCACCAUCCCC
1353


1506-1537
Mm
strand







NR1H3-1442-
Hs-Mf-
19 mer sense
CUCCAUCCACCAUCCCCAU
1354


1508-1539
Mm
strand







NR1H3-1443-
Hs-Mf-
19 mer sense
UCCAUCCACCAUCCCCAUG
1355


1509-1540
Mm
strand







NR1H3-1444-
Hs-Mf-
19 mer sense
CCAUCCACCAUCCCCAUGA
1356


1510-1541
Mm
strand







NR1H3-1445-
Hs-Mf-
19 mer sense
CAUCCACCAUCCCCAUGAC
1357


1511-1542
Mm
strand







NR1H3-1446-
Hs-Mf-
19 mer sense
AUCCACCAUCCCCAUGACC
1358


1512-1543
Mm
strand







NR1H3-1447-
Hs-Mf
19 mer sense
UCCACCAUCCCCAUGACCG
1359


1513

strand







NR1H3-1448-
Hs-Mf
19 mer sense
CCACCAUCCCCAUGACCGA
1360


1514

strand







NR1H3-1449-
Hs-Mf
19 mer sense
CACCAUCCCCAUGACCGAC
1361


1515

strand







NR1H3-1450-
Hs-Mf
19 mer sense
ACCAUCCCCAUGACCGACU
1362


1516

strand







NR1H3-1451-
Hs-Mf
19 mer sense
CCAUCCCCAUGACCGACUG
1363


1517

strand







NR1H3-1452-
Hs-Mf-
19 mer sense
CAUCCCCAUGACCGACUGA
1364


1518-1549
Mm
strand







NR1H3-1453-
Hs-Mf-
19 mer sense
AUCCCCAUGACCGACUGAU
1365


1519-1550
Mm
strand







NR1H3-1454-
Hs-Mf-
19 mer sense
UCCCCAUGACCGACUGAUG
1366


1520-1551
Mm
strand







NR1H3-1455-
Hs-Mf-
19 mer sense
CCCCAUGACCGACUGAUGU
1367


1521-1552
Mm
strand







NR1H3-1456-
Hs-Mf-
19 mer sense
CCCAUGACCGACUGAUGUU
1368


1522-1553
Mm
strand







NR1H3-1457-
Hs-Mf-
19 mer sense
CCAUGACCGACUGAUGUUC
1369


1523-1554
Mm
strand







NR1H3-1459-
Hs-Mf-
19 mer sense
AUGACCGACUGAUGUUCCC
1370


1525-1556
Mm
strand







NR1H3-1460-
Hs-Mf-
19 mer sense
UGACCGACUGAUGUUCCCA
1371


1526-1557
Mm
strand







NR1H3-1461-
Hs-Mf-
19 mer sense
GACCGACUGAUGUUCCCAC
1372


1527-1558
Mm
strand







NR1H3-1462-
Hs-Mf-
19 mer sense
ACCGACUGAUGUUCCCACG
1373


1528-1559
Mm
strand







NR1H3-1463-
Hs-Mf-
19 mer sense
CCGACUGAUGUUCCCACGG
1374


1529-1560
Mm
strand







NR1H3-1465-
Hs-Mf-
19 mer sense
GACUGAUGUUCCCACGGAU
1375


1531-1562
Mm
strand







NR1H3-1466-
Hs-Mf-
19 mer sense
ACUGAUGUUCCCACGGAUG
1376


1532-1563
Mm
strand







NR1H3-1468-
Hs-Mf-
19 mer sense
UGAUGUUCCCACGGAUGCU
1377


1534-1565
Mm
strand







NR1H3-1469-
Hs-Mf-
19 mer sense
GAUGUUCCCACGGAUGCUA
1378


1535-1566
Mm
strand







NR1H3-1471-
Hs-Mf-
19 mer sense
UGUUCCCACGGAUGCUAAU
1379


1537-1568
Mm
strand







NR1H3-1472-
Hs-Mf-
19 mer sense
GUUCCCACGGAUGCUAAUG
1380


1538-1569
Mm
strand







NR1H3-1473-
Hs-Mf-
19 mer sense
UUCCCACGGAUGCUAAUGA
1381


1539-1570
Mm
strand







NR1H3-1474-
Hs-Mf-
19 mer sense
UCCCACGGAUGCUAAUGAA
1382


1540-1571
Mm
strand







NR1H3-1475-
Hs-Mf-
19 mer sense
CCCACGGAUGCUAAUGAAA
1383


1541-1572
Mm
strand







NR1H3-1476-
Hs-Mf-
19 mer sense
CCACGGAUGCUAAUGAAAC
1384


1542-1573
Mm
strand







NR1H3-1477-
Hs-Mf-
19 mer sense
CACGGAUGCUAAUGAAACU
1385


1543-1574
Mm
strand







NR1H3-1478-
Hs-Mf-
19 mer sense
ACGGAUGCUAAUGAAACUG
1386


1544-1575
Mm
strand







NR1H3-1479-
Hs-Mf-
19 mer sense
CGGAUGCUAAUGAAACUGG
1387


1545-1576
Mm
strand







NR1H3-1480-
Hs-Mf-
19 mer sense
GGAUGCUAAUGAAACUGGU
1388


1546-1577
Mm
strand







NR1H3-1481-
Hs-Mf-
19 mer sense
GAUGCUAAUGAAACUGGUG
1389


1547-1578
Mm
strand







NR1H3-1483-
Hs-Mf-
19 mer sense
UGCUAAUGAAACUGGUGAG
1390


1549-1580
Mm
strand







NR1H3-1484-
Hs-Mf-
19 mer sense
GCUAAUGAAACUGGUGAGC
1391


1550-1581
Mm
strand







NR1H3-1485-
Hs-Mf-
19 mer sense
CUAAUGAAACUGGUGAGCC
1392


1551-1582
Mm
strand







NR1H3-1486-
Hs-Mf-
19 mer sense
UAAUGAAACUGGUGAGCCU
1393


1552-1583
Mm
strand







NR1H3-1487-
Hs-Mf-
19 mer sense
AAUGAAACUGGUGAGCCUC
1394


1553-1584
Mm
strand







NR1H3-1488-
Hs-Mf-
19 mer sense
AUGAAACUGGUGAGCCUCC
1395


1554-1585
Mm
strand







NR1H3-1489-
Hs-Mf-
19 mer sense
UGAAACUGGUGAGCCUCCG
1396


1555-1586
Mm
strand







NR1H3-1491-
Hs-Mf-
19 mer sense
AAACUGGUGAGCCUCCGGA
1397


1557-1588
Mm
strand







NR1H3-1492-
Hs-Mf-
19 mer sense
AACUGGUGAGCCUCCGGAC
1398


1558-1589
Mm
strand







NR1H3-1494-
Hs-Mf
19 mer sense
CUGGUGAGCCUCCGGACCC
1399


1560

strand







NR1H3-1505-
Hs-Mf-
19 mer sense
CCGGACCCUGAGCAGCGUC
1400


1571-1602
Mm
strand







NR1H3-1507-
Hs-Mf-
19 mer sense
GGACCCUGAGCAGCGUCCA
1401


1573-1604
Mm
strand







NR1H3-1508-
Hs-Mf
19 mer sense
GACCCUGAGCAGCGUCCAC
1402


1574

strand







NR1H3-1509-
Hs-Mf
19 mer sense
ACCCUGAGCAGCGUCCACU
1403


1575

strand







NR1H3-1510-
Hs-Mf
19 mer sense
CCCUGAGCAGCGUCCACUC
1404


1576

strand







NR1H3-1511-
Hs-Mf-
19 mer sense
CCUGAGCAGCGUCCACUCA
1405


1577-1608
Mm
strand







NR1H3-1512-
Hs-Mf-
19 mer sense
CUGAGCAGCGUCCACUCAG
1406


1578-1609
Mm
strand







NR1H3-1513-
Hs-Mf-
19 mer sense
UGAGCAGCGUCCACUCAGA
1407


1579-1610
Mm
strand







NR1H3-1514-
Hs-Mf-
19 mer sense
GAGCAGCGUCCACUCAGAG
1408


1580-1611
Mm
strand







NR1H3-1515-
Hs-Mf-
19 mer sense
AGCAGCGUCCACUCAGAGC
1409


1581-1612
Mm
strand







NR1H3-1516-
Hs-Mf-
19 mer sense
GCAGCGUCCACUCAGAGCA
1410


1582-1613
Mm
strand







NR1H3-1517-
Hs-Mf-
19 mer sense
CAGCGUCCACUCAGAGCAA
1411


1583-1614
Mm
strand







NR1H3-1518-
Hs-Mf-
19 mer sense
AGCGUCCACUCAGAGCAAG
1412


1584-1615
Mm
strand







NR1H3-1519-
Hs-Mf-
19 mer sense
GCGUCCACUCAGAGCAAGU
1413


1585-1616
Mm
strand







NR1H3-1520-
Hs-Mf-
19 mer sense
CGUCCACUCAGAGCAAGUG
1414


1586-1617
Mm
strand







NR1H3-1521-
Hs-Mf-
19 mer sense
GUCCACUCAGAGCAAGUGU
1415


1587-1618
Mm
strand







NR1H3-1522-
Hs-Mf-
19 mer sense
UCCACUCAGAGCAAGUGUU
1416


1588-1619
Mm
strand







NR1H3-1523-
Hs-Mf-
19 mer sense
CCACUCAGAGCAAGUGUUU
1417


1589-1620
Mm
strand







NR1H3-1525-
Hs-Mf-
19 mer sense
ACUCAGAGCAAGUGUUUGC
1418


1591-1622
Mm
strand







NR1H3-1526-
Hs-Mf-
19 mer sense
CUCAGAGCAAGUGUUUGCA
1419


1592-1623
Mm
strand







NR1H3-1527-
Hs-Mf-
19 mer sense
UCAGAGCAAGUGUUUGCAC
1420


1593-1624
Mm
strand







NR1H3-1528-
Hs-Mf-
19 mer sense
CAGAGCAAGUGUUUGCACU
1421


1594-1625
Mm
strand







NR1H3-1529-
Hs-Mf-
19 mer sense
AGAGCAAGUGUUUGCACUG
1422


1595-1626
Mm
strand







NR1H3-1530-
Hs-Mf-
19 mer sense
GAGCAAGUGUUUGCACUGC
1423


1596-1627
Mm
strand







NR1H3-1531-
Hs-Mf-
19 mer sense
AGCAAGUGUUUGCACUGCG
1424


1597-1628
Mm
strand







NR1H3-1532-
Hs-Mf-
19 mer sense
GCAAGUGUUUGCACUGCGU
1425


1598-1629
Mm
strand







NR1H3-1533-
Hs-Mf-
19 mer sense
CAAGUGUUUGCACUGCGUC
1426


1599-1630
Mm
strand







NR1H3-1534-
Hs-Mf-
19 mer sense
AAGUGUUUGCACUGCGUCU
1427


1600-1631
Mm
strand







NR1H3-1535-
Hs-Mf-
19 mer sense
AGUGUUUGCACUGCGUCUG
1428


1601-1632
Mm
strand







NR1H3-1536-
Hs-Mf-
19 mer sense
GUGUUUGCACUGCGUCUGC
1429


1602-1633
Mm
strand







NR1H3-1537-
Hs-Mf-
19 mer sense
UGUUUGCACUGCGUCUGCA
1430


1603-1634
Mm
strand







NR1H3-1538-
Hs-Mf-
19 mer sense
GUUUGCACUGCGUCUGCAG
1431


1604-1635
Mm
strand







NR1H3-1539-
Hs-Mf-
19 mer sense
UUUGCACUGCGUCUGCAGG
1432


1605-1636
Mm
strand







NR1H3-1540-
Hs-Mf-
19 mer sense
UUGCACUGCGUCUGCAGGA
1433


1606-1637
Mm
strand







NR1H3-1541-
Hs-Mf-
19 mer sense
UGCACUGCGUCUGCAGGAC
1434


1607-1638
Mm
strand







NR1H3-1542-
Hs-Mf-
19 mer sense
GCACUGCGUCUGCAGGACA
1435


1608-1639
Mm
strand







NR1H3-1543-
Hs-Mf-
19 mer sense
CACUGCGUCUGCAGGACAA
1436


1609-1640
Mm
strand







NR1H3-1544-
Hs-Mf-
19 mer sense
ACUGCGUCUGCAGGACAAA
1437


1610-1641
Mm
strand







NR1H3-1545-
Hs-Mf-
19 mer sense
CUGCGUCUGCAGGACAAAA
1438


1611-1642
Mm
strand







NR1H3-1546-
Hs-Mf-
19 mer sense
UGCGUCUGCAGGACAAAAA
1439


1612-1643
Mm
strand







NR1H3-1547-
Hs-Mf-
19 mer sense
GCGUCUGCAGGACAAAAAG
1440


1613-1644
Mm
strand







NR1H3-1548-
Hs-Mf-
19 mer sense
CGUCUGCAGGACAAAAAGC
1441


1614-1645
Mm
strand







NR1H3-1549-
Hs-Mf-
19 mer sense
GUCUGCAGGACAAAAAGCU
1442


1615-1646
Mm
strand







NR1H3-1550-
Hs-Mf-
19 mer sense
UCUGCAGGACAAAAAGCUC
1443


1616-1647
Mm
strand







NR1H3-1551-
Hs-Mf-
19 mer sense
CUGCAGGACAAAAAGCUCC
1444


1617-1648
Mm
strand







NR1H3-1553-
Hs-Mf-
19 mer sense
GCAGGACAAAAAGCUCCCA
1445


1619-1650
Mm
strand







NR1H3-1554-
Hs-Mf-
19 mer sense
CAGGACAAAAAGCUCCCAC
1446


1620-1651
Mm
strand







NR1H3-1555-
Hs-Mf-
19 mer sense
AGGACAAAAAGCUCCCACC
1447


1621-1652
Mm
strand







NR1H3-1556-
Hs-Mf-
19 mer sense
GGACAAAAAGCUCCCACCG
1448


1622-1653
Mm
strand







NR1H3-1558-
Hs-Mf-
19 mer sense
ACAAAAAGCUCCCACCGCU
1449


1624-1655
Mm
strand







NR1H3-1559-
Hs-Mf-
19 mer sense
CAAAAAGCUCCCACCGCUG
1450


1625-1656
Mm
strand







NR1H3-1560-
Hs-Mf-
19 mer sense
AAAAAGCUCCCACCGCUGC
1451


1626-1657
Mm
strand







NR1H3-1561-
Hs-Mf-
19 mer sense
AAAAGCUCCCACCGCUGCU
1452


1627-1658
Mm
strand







NR1H3-1562-
Hs-Mf
19 mer sense
AAAGCUCCCACCGCUGCUC
1453


1628

strand







NR1H3-1563-
Hs-Mf
19 mer sense
AAGCUCCCACCGCUGCUCU
1454


1629

strand







NR1H3-1564-
Hs-Mf
19 mer sense
AGCUCCCACCGCUGCUCUC
1455


1630

strand







NR1H3-1565-
Hs-Mf
19 mer sense
GCUCCCACCGCUGCUCUCU
1456


1631

strand







NR1H3-1567-
Hs-Mf
19 mer sense
UCCCACCGCUGCUCUCUGA
1457


1633

strand







NR1H3-1569-
Hs-Mf
19 mer sense
CCACCGCUGCUCUCUGAGA
1458


1635

strand







NR1H3-1570-
Hs-Mf
19 mer sense
CACCGCUGCUCUCUGAGAU
1459


1636

strand







NR1H3-1572-
Hs-Mf-
19 mer sense
CCGCUGCUCUCUGAGAUCU
1460


1638-1669
Mm
strand







NR1H3-1573-
Hs-Mf-
19 mer sense
CGCUGCUCUCUGAGAUCUG
1461


1639-1670
Mm
strand







NR1H3-1574-
Hs-Mf-
19 mer sense
GCUGCUCUCUGAGAUCUGG
1462


1640-1671
Mm
strand







NR1H3-1577-
Hs-Mf-
19 mer sense
GCUCUCUGAGAUCUGGGAU
1463


1643-1674
Mm
strand







NR1H3-1579-
Hs-Mf-
19 mer sense
UCUCUGAGAUCUGGGAUGU
1464


1645-1676
Mm
strand







NR1H3-1580-
Hs-Mf-
19 mer sense
CUCUGAGAUCUGGGAUGUG
1465


1646-1677
Mm
strand







NR1H3-1581-
Hs-Mf-
19 mer sense
UCUGAGAUCUGGGAUGUGC
1466


1647-1678
Mm
strand







NR1H3-1582-
Hs-Mf-
19 mer sense
CUGAGAUCUGGGAUGUGCA
1467


1648-1679
Mm
strand







NR1H3-1583-
Hs-Mf-
19 mer sense
UGAGAUCUGGGAUGUGCAC
1468


1649-1680
Mm
strand







NR1H3-1584-
Hs-Mf-
19 mer sense
GAGAUCUGGGAUGUGCACG
1469


1650-1681
Mm
strand







NR1H3-1585-
Hs-Mf-
19 mer sense
AGAUCUGGGAUGUGCACGA
1470


1651-1682
Mm
strand







NR1H3-1586-
Hs-Mf-
19 mer sense
GAUCUGGGAUGUGCACGAA
1471


1652-1683
Mm
strand







NR1H3-1587-
Hs-Mf-
19 mer sense
AUCUGGGAUGUGCACGAAU
1472


1653-1684
Mm
strand







NR1H3-1588-
Hs-Mf-
19 mer sense
UCUGGGAUGUGCACGAAUG
1473


1654-1685
Mm
strand







NR1H3-1589-
Hs-Mf-
19 mer sense
CUGGGAUGUGCACGAAUGA
1474


1655-1686
Mm
strand







NR1H3-1590-
Hs-Mf-
19 mer sense
UGGGAUGUGCACGAAUGAC
1475


1656-1687
Mm
strand







NR1H3-1591-
Hs-Mf-
19 mer sense
GGGAUGUGCACGAAUGACU
1476


1657-1688
Mm
strand







NR1H3-1592-
Hs-Mf-
19 mer sense
GGAUGUGCACGAAUGACUG
1477


1658-1689
Mm
strand







NR1H3-1593-
Hs-Mf-
19 mer sense
GAUGUGCACGAAUGACUGU
1478


1659-1690
Mm
strand







NR1H3-1656-
Hs-Mf
19 mer sense
UGGUGGCUGCCUCCUAGAA
1479


1720

strand







NR1H3-1657-
Hs-Mf
19 mer sense
GGUGGCUGCCUCCUAGAAG
1480


1721

strand







NR1H3-1658-
Hs-Mf
19 mer sense
GUGGCUGCCUCCUAGAAGU
1481


1722

strand







NR1H3-1659-
Hs-Mf
19 mer sense
UGGCUGCCUCCUAGAAGUG
1482


1723

strand







NR1H3-1660-
Hs-Mf
19 mer sense
GGCUGCCUCCUAGAAGUGG
1483


1724

strand







NR1H3-1661-
Hs-Mf
19 mer sense
GCUGCCUCCUAGAAGUGGA
1484


1725

strand







NR1H3-1662-
Hs-Mf
19 mer sense
CUGCCUCCUAGAAGUGGAA
1485


1726

strand







NR1H3-1663-
Hs-Mf
19 mer sense
UGCCUCCUAGAAGUGGAAC
1486


1727

strand







NR1H3-1664-
Hs-Mf
19 mer sense
GCCUCCUAGAAGUGGAACA
1487


1728

strand







NR1H3-1665-
Hs-Mf
19 mer sense
CCUCCUAGAAGUGGAACAG
1488


1729

strand







NR1H3-1666-
Hs-Mf
19 mer sense
CUCCUAGAAGUGGAACAGA
1489


1730

strand







NR1H3-1667-
Hs-Mf
19 mer sense
UCCUAGAAGUGGAACAGAC
1490


1731

strand







NR1H3-1668-
Hs-Mf
19 mer sense
CCUAGAAGUGGAACAGACU
1491


1732

strand







NR1H3-1669-
Hs-Mf
19 mer sense
CUAGAAGUGGAACAGACUG
1492


1733

strand







NR1H3-1671-
Hs-Mf
19 mer sense
AGAAGUGGAACAGACUGAG
1493


1735

strand







NR1H3-1677-
Hs-Mf-
19 mer sense
GGAACAGACUGAGAAGGGC
1494


1741-1768
Mm
strand







NR1H3-1679-
Hs-Mf-
19 mer sense
AACAGACUGAGAAGGGCAA
1495


1743-1770
Mm
strand







NR1H3-1680-
Hs-Mf-
19 mer sense
ACAGACUGAGAAGGGCAAA
1496


1744-1771
Mm
strand







NR1H3-1681-
Hs-Mf-
19 mer sense
CAGACUGAGAAGGGCAAAC
1497


1745-1772
Mm
strand







NR1H3-1682-
Hs-Mf-
19 mer sense
AGACUGAGAAGGGCAAACA
1498


1746-1773
Mm
strand







NR1H3-1683-
Hs-Mf-
19 mer sense
GACUGAGAAGGGCAAACAU
1499


1747-1774
Mm
strand







NR1H3-1684-
Hs-Mf-
19 mer sense
ACUGAGAAGGGCAAACAUU
1500


1748-1775
Mm
strand







NR1H3-1685-
Hs-Mf-
19 mer sense
CUGAGAAGGGCAAACAUUC
1501


1749-1776
Mm
strand







NR1H3-1686-
Hs-Mf-
19 mer sense
UGAGAAGGGCAAACAUUCC
1502


1750-1777
Mm
strand







NR1H3-1687-
Hs-Mf-
19 mer sense
GAGAAGGGCAAACAUUCCU
1503


1751-1778
Mm
strand







NR1H3-1728-
Hs-Mf
19 mer sense
CCCGUGGCAUUAAAAGAGA
1504


1792

strand







NR1H3-1729-
Hs-Mf
19 mer sense
CCGUGGCAUUAAAAGAGAG
1505


1793

strand







NR1H3-1730-
Hs-Mf
19 mer sense
CGUGGCAUUAAAAGAGAGU
1506


1794

strand







NR1H3-1731-
Hs-Mf
19 mer sense
GUGGCAUUAAAAGAGAGUC
1507


1795

strand







NR1H3-1732-
Hs-Mf-
19 mer sense
UGGCAUUAAAAGAGAGUCA
1508


1796-1826
Mm
strand







NR1H3-1209-
Hs-Mf-
19 mer sense
CUCAAGGAUUUCAGUUAUA
1509


1229-1306
Mm
strand







NR1H3-1210-
Hs-Mf-
19 mer sense
UCAAGGAUUUCAGUUAUAA
1510


1230-1307
Mm
strand







NR1H3-1594-
Hs-Mf-
19 mer sense
AUGUGCACGAAUGACUGUU
1511


1660-1691
Mm
strand







NR1H3-1209-
Hs-Mf-
19 mer
UAUAACUGAAAUCCUUGAG
1512


1229-1306
Mm
antisense






strand







NR1H3-1210-
Hs-Mf-
19 mer
UUAUAACUGAAAUCCUUGA
1513


1230-1307
Mm
antisense






strand







NR1H3-1515-
Hs-Mf-
19 mer
GCUCUGAGUGGACGCUGCU
1514


1581-1612
Mm
antisense






strand







NR1H3-1594-
Hs-Mf-
19 mer
AACAGUCAUUCGUGCACAU
1515


1660-1691
Mm
antisense






strand







DNA

Homo


ATGGAATTCC CCATTGGATC
1516




sapiens


CCTCGAAACT AACAACTTCC






GTCGCTTTAC TCCGGAGTCA






CTGGTGGAGA TAGAGAAGCA






AATTGCTGCC AAGCAGGGAA






CAAAGAAAGC CAGAGAGAAG






CATAGGGAGC AGAAGGACCA






AGAAGAGAAG CCTCGGCCCC






AGCTGGACTT GAAAGCCTGC






AACCAGCTGC CCAAGTTCTA






TGGTGAGCTC CCAGCAGAAC






TGATCGGGGA GCCCCTGGAG






GATCTAGATC CGTTCTACAG






CACACACCGG ACATTTATGG






TGCTGAACAA AGGGAGGACC






ATTTCCCGGT TTAGTGCCAC






TCGGGCCCTG TGGCTATTCA






GTCCTTTCAA CCTGATCAGA






AGAACGGCCA TCAAAGTGTC






TGTCCACTCG TGGTTCAGTT






TATTTATTAC GGTCACTATT






TTGGTTAATT GTGTGTGCAT






GACCCGAACT GACCTTCCAG






AGAAAATTGA ATATGTCTTC






ACTGTCATTT ACACCTTTGA






AGCCTTGATA AAGATACTGG






CAAGAGGATT TTGTCTAAAT






GAGTTCACGT ACCTGAGAGA






TCCTTGGAAC TGGCTGGATT






TTAGCGTCAT TACCCTGGCA






TATGTTGGCA CAGCAATAGA






TCTCCGTGGG ATCTCAGGCC






TGCGGACATT CAGAGTTCTT






AGAGCATTAA AAACAGTTTC






TGTGATCCCA GGCCTGAAGG






TCATTGTGGG GGCCCTGATT






CACTCAGTGA AGAAACTGGC






TGATGTGACC ATCCTCACCA






TCTTCTGCCT AAGTGTTTTT






GCCTTGGTGG GGCTGCAACT






CTTCAAGGGC AACCTCAAAA






ATAAATGTGT CAAGAATGAC






ATGGCTGTCA ATGAGACAAC






CAACTACTCA TCTCACAGAA






AACCAGATAT CTACATAAAT






AAGCGAGGCA CTTCTGACCC






CTTACTGTGT GGCAATGGAT






CTGACTCAGG CCACTGCCCT






GATGGTTATA TCTGCCTTAA






AACTTCTGAC AACCCGGATT






TTAACTACAC CAGCTTTGAT






TCCTTTGCTT GGGCTTTCCT






CTCACTGTTC






CGCCTCATGA CACAGGATTC






CTGGGAACGCCTCTACCAGC






AGACCCTGAG GACTTCTGGG






AAAATCTATA TGATCTTTTT






TGTGCTCGTA ATCTTCCTGG






GATCTTTCTA CCTGGTCAAC






TTGATCTTGG CTGTAGTCAC






CATGGCGTAT GAGGAGCAGA






ACCAGGCAAC CACTGATGAA






ATTGAAGCAA AGGAGAAGAA






GTTCCAGGAG GCCCTCGAGA






TGCTCCGGAA GGAGCAGGAG






GTGCTAGCAG CACTAGGGAT






TGACACAACC TCTCTCCACT






CCCACAATGG ATCACCTTTA






ACCTCCAAAA ATGCCAGTGA






GAGAAGGCAT AGAATAAAGC






CAAGAGTGTC AGAGGGCTCC






ACAGAAGACA ACAAATCACC






CCGCTCTGAT CCTTACAACC






AGCGCAGGAT GTCTTTTCTA






GGCCTCGCCT CTGGAAAACG






CCGGGCTAGT CATGGCAGTG






TGTTCCATTT CCGGTCCCCT






GGCCGAGATA TCTCACTCCC






TGAGGGAGTC ACAGATGATG






GAGTCTTTCC TGGAGACCAC






GAAAGCCATC GGGGCTCTCT






GCTGCTGGGT GGGGGTGCTG






GCCAGCAAGG CCCCCTCCCT






AGAAGCCCTC TTCCTCAACC






CAGCAACCCT GACTCCAGGC






ATGGAGAAGA TGAACACCAA






CCGCCGCCCA CTAGTGAGCT






TGCCCCTGGA GCTGTCGATG






TCTCGGCATT CGATGCAGGA






CAAAAGAAGA CTTTCTTGTC






AGCAGAATAC TTAGATGAAC






CTTTCCGGGC CCAAAGGGCA






ATGAGTGTTG TCAGTATCAT






AACCTCCGTC CTTGAGGAAC






TCGAGGAGTC TGAACAGAAG






TGCCCACCCT GCTTGACCAG






CTTGTCTCAG AAGTATCTGA






TCTGGGATTG CTGCCCCATG






TGGGTGAAGC TCAAGACAAT






TCTCTTTGGG CTTGTGACGG






ATCCCTTTGC AGAGCTCACC






ATCACCTTGT GCATCGTGGT






GAACACCATC TTCATGGCCA






TGGAGCACCA TGGCATGAGC






CCTACCTTCG AAGCCATGCT






CCAGATAGGC AACATCGTCT






TTACCATATT






TTTTACTGCT GAAATGGTCT






TCAAAATCAT TGCCTTCGAC






CCATACTATT ATTTCCAGAA






GAAGTGGAAT ATCTTTGACT






GCATCATCGT CACTGTGAGT






CTGCTAGAGC TGGGCGTGGC






CAAGAAGGGA AGCCTGTCTG






TGCTGCGGAG CTTCCGCTTG






CTGCGCGTAT TCAAGCTGGC






CAAATCCTGG CCCACCTTAA






ACACACTCAT CAAGATCATC






GGAAACTCAG TGGGGGCACT






GGGGAACCTC ACCATCATCC






TGGCCATCAT TGTCTTTGTC






TTTGCTCTGG TTGGCAAGCA






GCTCCTAGGG GAAAACTACC






GTAACAACCG AAAAAATATC






TCCGCGCCCC ATGAAGACTG






GCCCCGCTGG CACATGCACG






ACTTCTTCCA CTCTTTCCTC






ATTGTCTTCC GTATCCTCTG






TGGAGAGTGG ATTGAGAACA






TGTGGGCCTG CATGGAAGTT






GGCCAAAAAT CCATATGCCT






CATCCTTTTC TTGACGGTGA






TGGTGCTAGG GAACCTGGTG






GTGCTTAACC TGTTCATCGC






CCTGCTATTG AACTCTTTCA






GTGCTGACAA CCTCACAGCC






CCGGAGGACG ATGGGGAGGT






GAACAACCTG CAGGTGGCCC






TGGCACGGAT CCAGGTCTTT






GGCCATCGTA CCAAACAGGC






TCTTTGCAGC TTCTTCAGCA






GGTCCTGCCC ATTCCCCCAG






CCCAAGGCAG AGCCTGAGCT






GGTGGTGAAA CTCCCACTCT






CCAGCTCCAA GGCTGAGAAC






CACATTGCTG CCAACACTGC






CAGGGGGAGC TCTGGAGGGC






TCCAAGCTCC CAGAGGCCCC






AGGGATGAGC ACAGTGACTT






CATCGCTAAT CCGACTGTGT






GGGTCTCTGT GCCCATTGCT






GAGGGTGAAT CTGATCTTGA






TGACTTGGAG GATGATGGTG






GGGAAGATGC TCAGAGCTTC






CAGCAGGAAG TGATCCCCAA






AGGACAGCAG GAGCAGCTGC






AGCAAGTCGA GAGGTGTGGG






GACCACCTGA CACCCAGGAG






CCCAGGCACT GGAACATCTT






CTGAGGACCT GGCTCCATCC






CTGGGTGAGA CGTGGAAAGA






TGAGTCTGTT CCTCAGGTCC






CTGCTGAGGG AGTGGACGAC






ACAAGCTCCT CTGAGGGCAG






CACGGTGGAC TGCCTAGATC






CTGAGGAAAT CCTGAGGAAG






ATCCCTGAGC TGGCAGATGA






CCTGGAAGAA CCAGATGACT






GCTTCACAGA AGGATGCATT






CGCCACTGTC CCTGCTGCAA






ACTGGATACC ACCAAGAGTC






CATGGGATGT GGGCTGGCAG






GTGCGCAAGA CTTGCTACCG






TATCGTGGAG CACAGCTGGT






TTGAGAGCTT CATCATCTTC






ATGATCCTGC TCAGCAGTGG






ATCTCTGGCC TTTGAAGACT






ATTACCTGGA CCAGAAGCCC






ACGGTGAAAG CTTTGCTGGA






GTACACTGAC AGGGTCTTCA






CCTTTATCTT TGTGTTCGAG






ATGCTGCTTA AGTGGGTGGC






CTATGGCTTC AAAAAGTACT






TCACCAATGC CTGGTGCTGG






CTGGACTTCC TCATTGTGAA






TATCTCACTG ATAAGTCTCA






CAGCGAAGAT TCTGGAATAT






TCTGAAGTGG CTCCCATCAA






AGCCCTTCGA ACCCTTCGCG






CTCTGCGGCC ACTGCGGGCT






CTTTCTCGAT TTGAAGGCAT






GCGGGTGGTG GTGGATGCCC






TGGTGGGCGC CATCCCATCC






ATCATGAATG TCCTCCTCGT






CTGCCTCATC TTCTGGCTCA






TCTTCAGCAT CATGGGTGTG






AACCTCTTCG CAGGGAAGTT






TTGGAGGTGC ATCAACTATA






CCGATGGAGA GTTTTCCCTT






GTACCTTTGT CGATTGTGAA






TAACAAGTCT GACTGCAAGA






TTCAAAACTC CACTGGCAGC






TTCTTCTGGG TCAATGTGAA






AGTCAACTTT GATAATGTTG






CAATGGGTTA CCTTGCACTT






CTGCAGGTGG CAACCTTTAA






AGGCTGGATG GACATTATGT






ATGCAGCTGT TGATTCCCGG






GAGGTCAACA TGCAACCCAA






GTGGGAGGAC AACGTGTACA






TGTATTTGTA CTTTGTCATC






TTCATCATTT TTGGAGGCTT






CTTCACACTG AATCTCTTTG






TTGGGGTCAT AATTGACAAC






TTCAATCAAC AGAAAAAAAA






GTTAGGGGGC CAGGACATCT






TCATGACAGA GGAGCAGAAG






AAATACTACA ATGCCATGAA






GAAGTTGGGC TCCAAGAAGC






CCCAGAAGCC CATCCCACGG






CCCCTGAACA AGTTCCAGGG






TTTTGTCTTT GACATCGTGA






CCAGACAAGC TTTTGACATC






ACCATCATGG TCCTCATCTG






CCTCAACATG ATCACCATGA






TGGTGGAGAC TGATGACCAA






AGTGAAGAAA AGACGAAAAT






TCTGGGCAAA ATCAACCAGT






TCTTTGTGGC CGTCTTCACA






GGCGAATGTG TCATGAAGAT






GTTCGCTTTG AGGCAGTACT






ACTTCACAAA TGGCTGGAAT






GTGTTTGACT TCATTGTGGT






GGTTCTCTCC ATTGCGAGCC






TGATTTTTTC TGCAATTCTT






AAGTCACTTC AAAGTTACTT






CTCCCCAACG CTCTTCAGAG






TCATCCGCCT GGCCCGAATT






GGCCGCATCC TCAGACTGAT






CCGAGCGGCC AAGGGGATCC






GCACACTGCT CTTTGCCCTC






ATGATGTCCC TGCCTGCCCT






CTTCAACATC GGGCTGTTGC






TATTCCTTGT CATGTTCATC






TACTCTATCT TCGGTATGTC






CAGCTTTCCC CATGTGAGGT






GGGAGGCTGG CATCGACGAC






ATGTTCAACT TCCAGACCTT






CGCCAACAGC ATGCTGTGCC






TCTTCCAGAT TACCACGTCG






GCCGGCTGGG ATGGCCTCCT






CAGCCCCATC CTCAACACAG






GGCCCCCCTA CTGTGACCCC






AATCTGCCCA ACAGCAATGG






CACCAGAGGG GACTGTGGGA






GCCCAGCCGT AGGCATCATC






TTCTTCACCA CCTACATCAT






CATCTCCTTC CTCATCGTGG






TCAACATGTA CATTGCAGTG






ATTCTGGAGA ACTTCAATGT






GGCCACGGAG GAGAGCACTG






AGCCCCTGAG TGAGGACGAC






TTTGACATGT TCTATGAGAC






CTGGGAGAAG TTTGACCCAG






AGGCCACTCA GTTTATTACC






TTTTCTGCTC TCTCGGACTT






TGCAGACACT CTCTCTGGTC






CCCTGAGAAT CCCAAAACCC






AATCGAAATA TACTGATCCA






GATGGACCTG CCTTTGGTCC






CTGGAGATAA GATCCACTGC






TTGGACATCC TTTTTGCTTT






CACCAAGAAT GTCCTAGGAG






AATCCGGGGA GTTGGATTCT






CTGAAGGCAA ATATGGAGGA






GAAGTTTATG GCAACTAATC






TTTCAAAATC ATCCTATGAA






CCAATAGCAA CCACTCTCCG






ATGGAAGCAA GAAGACATTT






CAGCCACTGT CATTCAAAAG






GCCTATCGGA GCTATGTGCT






GCACCGCTCC ATGGCACTCT






CTAACACCCC ATGTGTGCCC






AGAGCTGAGG AGGAGGCTGC






ATCACTCCCA GATGAAGGTT






TTGTTGCATT CACAGCAAAT






GAAAATTGTG TACTCCCAGA






CAAATCTGAA ACTGCTTCTG






CCACATCATT CCCACCGTCC






TATGAGAGTG TCACTAGAGG






CCTTAGTGAT AGAGTCAACA






TGAGGACATC TAGCTCAATA






CAAAATGAAG ATGAAGCCAC






CAGTATGGAG CTGATTGCCC






CTGGGCCCTA GTGA






Forward-942
Artificial

GTCTCTGTGCAGGAGATAGTTG
1517



Sequence








Reverse-1399
Artificial

GGAGGCTCACCAGTTTCATTA
1518



Sequence








NR1H3-1207-
Hs-Mf-
36 mer sense
UCCUCAAGGAUUUCAGUUAAGCA
1519


1227-1304
Mm
strand
GCCGAAAGGCUGC






NR1H3-1220-
Hs-Mf-
36 mer sense
CAGUUAUAACCGGGAAGACAGCA
1520


1240-1317
Mm
strand
GCCGAAAGGCUGC






NR1H3-1224-
Hs-Mf-
36 mer sense
UAUAACCGGGAAGACUUUGAGC
1521


1244-1321
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1244-
Hs-Mf-
36 mer sense
CAAAGCAGGGCUGCAAGUGAGCA
1522


1264-1341
Mm
strand
GCCGAAAGGCUGC






NR1H3-1252-
Hs-Mf-
36 mer sense
GGCUGCAAGUGGAAUUCAUAGC
1523


1272-1349
Mm
strand
AGCCGAAAGGCUGC









NR1H3-1259-
Hs-Mf-
36 mer sense
AGUGGAAUUCAUCAACCCCAGCA
1524


1279-1356
Mm
strand
GCCGAAAGGCUGC






NR1H3-1265-
Hs-Mf-
36 mer sense
AUUCAUCAACCCCAUCUUCAGCA
1525


1285-1362
Mm
strand
GCCGAAAGGCUGC






NR1H3-1266-
Hs-Mf-
36 mer sense
UUCAUCAACCCCAUCUUCGAGCA
1526


1286-1363
Mm
strand
GCCGAAAGGCUGC






NR1H3-1429-
Hs-Mf-
36 mer sense
UGCAUGCCUACGUCUCCAUAGCA
1527


1495-1526
Mm
strand
GCCGAAAGGCUGC






NR1H3-1433-
Hs-Mf-
36 mer sense
UGCCUACGUCUCCAUCCACAGCA
1528


1499-1530
Mm
strand
GCCGAAAGGCUGC






NR1H3-1437-
Hs-Mf-
36 mer sense
UACGUCUCCAUCCACCAUCAGCA
1529


1503-1534
Mm
strand
GCCGAAAGGCUGC






NR1H3-1439-
Hs-Mf-
36 mer sense
CGUCUCCAUCCACCAUCCCAGCA
1530


1505-1536
Mm
strand
GCCGAAAGGCUGC






NR1H3-1446-
Hs-Mf-
36 mer sense
AUCCACCAUCCCCAUGACCAGCA
1531


1512-1543
Mm
strand
GCCGAAAGGCUGC






NR1H3-1463-
Hs-Mf-
36 mer sense
CCGACUGAUGUUCCCACGGAGCA
1532


1529-1560
Mm
strand
GCCGAAAGGCUGC






NR1H3-1475-
Hs-Mf-
36 mer sense
CCCACGGAUGCUAAUGAAAAGCA
1533


1541-1572
Mm
strand
GCCGAAAGGCUGC






NR1H3-1479-
Hs-Mf-
36 mer sense
CGGAUGCUAAUGAAACUGGAGC
1534


1545-1576
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1481-
Hs-Mf-
36 mer sense
GAUGCUAAUGAAACUGGUGAGC
1535


1547-1578
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1485-
Hs-Mf-
36 mer sense
CUAAUGAAACUGGUGAGCCAGCA
1536


1551-1582
Mm
strand
GCCGAAAGGCUGC






NR1H3-1515-
Hs-Mf-
36 mer sense
AGCAGCGUCCACUCAGAGCAGCA
1537


1581-1612
Mm
strand
GCCGAAAGGCUGC






NR1H3-1517-
Hs-Mf-
36 mer sense
CAGCGUCCACUCAGAGCAAAGCA
1538


1583-1614
Mm
strand
GCCGAAAGGCUGC






NR1H3-1518-
Hs-Mf-
36 mer sense
AGCGUCCACUCAGAGCAAGAGCA
1539


1584-1615
Mm
strand
GCCGAAAGGCUGC






NR1H3-1533-
Hs-Mf-
36 mer sense
CAAGUGUUUGCACUGCGUCAGCA
1540


1599-1630
Mm
strand
GCCGAAAGGCUGC






NR1H3-1535-
Hs-Mf-
36 mer sense
AGUGUUUGCACUGCGUCUGAGCA
1541


1601-1632
Mm
strand
GCCGAAAGGCUGC






NR1H3-1545-
Hs-Mf-
36 mer sense
CUGCGUCUGCAGGACAAAAAGCA
1542


1611-1642
Mm
strand
GCCGAAAGGCUGC






NR1H3-1554-
Hs-Mf-
36 mer sense
CAGGACAAAAAGCUCCCACAGCA
1543


1620-1651
Mm
strand
GCCGAAAGGCUGC






NR1H3-1581-
Hs-Mf-
36 mer sense
UCUGAGAUCUGGGAUGUGCAGC
1544


1647-1678
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1586-
Hs-Mf-
36 mer sense
GAUCUGGGAUGUGCACGAAAGC
1545


1652-1683
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1587-
Hs-Mf-
36 mer sense
AUCUGGGAUGUGCACGAAUAGC
1546


1653-1684
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1588-
Hs-Mf-
36 mer sense
UCUGGGAUGUGCACGAAUGAGC
1547


1654-1685
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1663-
Hs-Mf
36 mer sense
UGCCUCCUAGAAGUGGAACAGCA
1548


1727

strand
GCCGAAAGGCUGC






NR1H3-1671-
Hs-Mf
36 mer sense
AGAAGUGGAACAGACUGAGAGC
1549


1735

strand
AGCCGAAAGGCUGC






NR1H3-1684-
Hs-Mf-
36 mer sense
ACUGAGAAGGGCAAACAUUAGC
1550


1748-1775
Mm
strand
AGCCGAAAGGCUGC






NR1H3-1731-
Hs-Mf
36 mer sense
GUGGCAUUAAAAGAGAGUCAGC
1551


1795

strand
AGCCGAAAGGCUGC






NR1H3-1732-
Hs-Mf-
36 mer sense
UGGCAUUAAAAGAGAGUCAAGC
1552


1796-1826
Mm
strand
AGCCGAAAGGCUGC








Claims
  • 1. A double stranded RNAi oligonucleotide (dsRNAi) for reducing NR1H3 expression, comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, and wherein (i) the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 786 and 874, respectively;(ii) the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 787 and 875, respectively;(iii) the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 1537 and 929, respectively; or(iv) the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 813 and 901, respectively.
  • 2. The double stranded RNAi oligonucleotide (dsRNAi) of claim 1, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 786 and 874, respectively.
  • 3. The double stranded RNAi oligonucleotide (dsRNAi) of claim 1, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 787 and 875, respectively.
  • 4. The double stranded RNAi oligonucleotide (dsRNAi) of claim 1, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 1537 and 929, respectively.
  • 5. The double stranded RNAi oligonucleotide (dsRNAi) of claim 1, wherein the sense and antisense strands comprise the nucleotide sequences set forth in SEQ ID NOs: 813 and 901, respectively.
  • 6. The double stranded RNAi oligonucleotide (dsRNAi) of claim 1, wherein the 3′ end of the sense strand comprises a stem-loop set forth as S1-L-S2, and wherein (i) S1 is complementary to S2, and S1 and S2 have the same length and are each 1-10 nucleotides in length; and(ii) L forms a loop between S1 and S2 of 3-5 nucleotides in length.
  • 7. The double stranded RNAi oligonucleotide (dsRNAi) of claim 6, wherein (i) S1 and S2 are 6 nucleotides in length; and(ii) L is a triloop or a tetraloop.
  • 8. The double stranded RNAi oligonucleotide (dsRNAi) of claim 7, wherein L is a tetraloop comprising the sequence 5′-GAAA-3′.
  • 9. The double stranded RNAi oligonucleotide (dsRNAi) of claim 6, wherein the stem-loop comprises the sequence 5′-GCAGCCGAAAGGCUGC-3′ (SEQ ID NO: 1121).
  • 10. The double stranded RNAi oligonucleotide (dsRNAi) of claim 6, wherein at least one nucleotide of the oligonucleotide is conjugated to one or more targeting ligands.
  • 11. The double stranded RNAi oligonucleotide (dsRNAi) of claim 10, wherein each targeting ligand comprises a carbohydrate, amino sugar, cholesterol, polypeptide or lipid.
  • 12. The double stranded RNAi oligonucleotide (dsRNAi) of claim 10, wherein the targeting ligand is a hepatocyte targeting ligand and each targeting ligand comprises a N-acetylgalactosamine (GalNAc) moiety.
  • 13. The double stranded RNAi oligonucleotide (dsRNAi) of claim 12, wherein the N-acetylgalactosamine (GalNAc) moiety is a monovalent GalNAc moiety, a bivalent GalNAc moiety, a trivalent GalNAc moiety or a tetravalent GalNAc moiety.
  • 14. The double stranded RNAi oligonucleotide (dsRNAi) of claim 10, wherein the stem loop comprises one or more targeting ligands conjugated to one or more nucleotides of the stem loop or the loop comprises one or more targeting ligands conjugated to one or more nucleotides of the loop.
  • 15. The double stranded RNAi oligonucleotide (dsRNAi) of claim 14, wherein the one or more targeting ligands is conjugated to one or more nucleotides of the loop, wherein the loop comprises 4 nucleotides numbered 1-4 from 5′ to 3′, wherein nucleotides at positions 2, 3, and 4 each comprise one or more targeting ligands, and wherein the targeting ligands are the same or different.
  • 16. The double stranded RNAi oligonucleotide (dsRNAi) of claim 14, wherein the targeting ligand is a hepatocyte targeting ligand and each targeting ligand comprises a N-acetylgalactosamine (GalNAc) moiety.
  • 17. The double stranded RNAi oligonucleotide (dsRNAi) of claim 16, wherein the N-acetylgalactosamine (GalNAc) moiety is a monovalent GalNAc moiety, a bivalent GalNAc moiety, a trivalent GalNAc moiety or a tetravalent GalNAc moiety.
  • 18. The double stranded RNAi oligonucleotide (dsRNAi) of claim 14, wherein the targeting ligand is a hepatocyte targeting ligand and up to 4 nucleotides of L of the stem-loop are each conjugated to a monovalent GalNAc moiety.
  • 19. The double stranded RNAi oligonucleotide (dsRNAi) of claim 6, comprising at least one modified nucleotide and said modified nucleotide comprises a 2′-modification selected from the group consisting of 2′-aminoethyl, 2′-fluoro, 2′-O-methyl, 2′-O-methoxyethyl, and 2′-deoxy-2′-fluoro-β-d-arabinonucleic acid.
  • 20. The double stranded RNAi oligonucleotide (dsRNAi) of claim 19, wherein all nucleotides of the oligonucleotide are modified, and the modification is 2′-fluoro and 2′-O-methyl.
  • 21. The double stranded RNAi oligonucleotide (dsRNAi) of claim 19, wherein the sense strand comprises 36 nucleotides with positions 1-36 from 5′ to 3′, wherein positions 8-11 comprise a 2′-fluoro modification; the antisense strand comprises 22 nucleotides with positions 1-22 from 5′ to 3′, and wherein positions 2, 3, 4, 5, 7, 10, and 14 comprise a 2′-fluoro modification; and the remaining nucleotides comprise a 2′-O-methyl modification.
  • 22. The double stranded RNAi oligonucleotide (dsRNAi) of claim 21, wherein (i) the oligonucleotide comprises at least one phosphorothioate linkage, wherein (a) the antisense strand comprises a phosphorothioate linkage (i) between positions 1 and 2, and between positions 2 and 3; or (ii) between positions 1 and 2, between positions 2 and 3, and between positions 3 and 4, wherein positions are numbered 1-4 from 5′ to 3′; or(b) the antisense strand is 22 nucleotides in length, and wherein the antisense strand comprises a phosphorothioate linkage between positions 20 and 21 and between positions 21 and 22, wherein positions are numbered 1-22 from 5′ to 3′, or (ii) the antisense strand comprises a phosphorylated nucleotide at the 5′ terminus, selected from uridine and adenosine, or(iii) the 4′-carbon of the sugar of the 5′-nucleotide of the antisense strand comprises a phosphate analog, wherein the phosphate analog is a 4′-phosphate analog comprising 5′-methoxyphosphonate-4′-oxy, or(iv) the antisense strand comprises an overhang sequence at the 3′ terminus, and wherein the overhang sequence is 2 nucleotides in length selected from the group consisting of AA, GG, AG, and GA.
  • 23. A double stranded RNAi oligonucleotide (dsRNAi) for reducing NR1H3 expression, comprising a sense strand and an antisense strand, wherein the sense strand and the antisense strand form a duplex region, wherein (i) the sense strand comprises the sequence and all of the modifications of 5′-mCs-mU-mC-mA-mA-mG-mG-fA-fU-fU-fU-mC-mA-mG-mU-mU-mA-mU-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 963), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fUs-fAs-fU-fA-mA-fC-mU-mG-fA-mA-mA-mU-fC-mC-mU-mU-mG-mA-mGs-mGs-mG-3′ (SEQ ID NO: 1051), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=
  • 24. The double stranded RNAi oligonucleotide (dsRNAi) of claim 23, wherein the sense strand comprises the sequence and all of the modifications of 5′-mCs-mU-mC-mA-mA-mG-mG-fA-fU-fU-fU-mC-mA-mG-mU-mU-mA-mU-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 963), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fUs-fAs-fU-fA-mA-fC-mU-mG-fA-mA-mA-mU-fC-mC-mU-mU-mG-mA-mGs-mGs-mG-3′ (SEQ ID NO: 1051), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=
  • 25. The double stranded RNAi oligonucleotide (dsRNAi) of claim 23, wherein the sense strand comprises the sequence and all of the modifications of 5′-mUs-mC-mA-mA-mG-mG-mA-fU-fU-fU-fC-mA-mG-mU-mU-mA-mU-mA-mA-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 964), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fUs-fUs-fA-fU-mA-fA-mC-mU-fG-mA-mA-mA-fU-mC-mC-mU-mU-mG-mAs-mGs-mG-3′ (SEQ ID NO: 1052), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=
  • 26. The double stranded RNAi oligonucleotide (dsRNAi) of claim 23, wherein the sense strand comprises the sequence and all of the modifications of 5′-mAs-mG-mC-mA-mG-mC-mG-fU-fC-fC-fA-mC-mU-mC-mA-mG-mA-mG-mC-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 1006), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fGs-fCs-fU-fC-mU-fG-mA-mG-fU-mG-mG-mA-fC-mG-mC-mU-mG-mC-mUs-mGs-mG-3′ (SEQ ID NO: 1094), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=
  • 27. The double stranded RNAi oligonucleotide (dsRNAi) of claim 23, wherein the sense strand comprises the sequence and all of the modifications of 5′-mAs-mU-mG-mU-mG-mC-mA-fC-fG-fA-fA-mU-mG-mA-mC-mU-mG-mU-mU-mA-mG-mC-mA-mG-mC-mC-mG-[ademA-GalNAc]-[ademA-GalNAc]-[ademA-GalNAc]-mG-mG-mC-mU-mG-mC-3′ (SEQ ID NO: 1018), and wherein the antisense strand comprises the sequence and all of the modifications of 5′-[MePhosphonate-4O-mUs]-fAs-fAs-fC-fA-mG-fU-mC-mA-fU-mU-mC-mG-fU-mG-mC-mA-mC-mA-mUs-mGs-mG-3′ (SEQ ID NO: 1106), wherein mC, mA, mG, and mU=2′-OMe ribonucleosides; fA, fC, fG, and fU=2′-F ribonucleosides; s=phosphorothioate, and wherein ademA-GalNAc=
  • 28. A pharmaceutical composition comprising a double stranded RNAi oligonucleotide of claim 23, and a pharmaceutically acceptable carrier, delivery agent or excipient.
  • 29. A method of treating non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus, comprising administering to a patient in need thereof a double stranded RNAi oligonucleotide of claim 23.
  • 30. A method of treating non-alcoholic fatty liver disease (NAFLD), non-alcoholic steatohepatitis (NASH), multiple sclerosis, or systemic lupus erythematosus, comprising administering to a patient in need thereof the pharmaceutical composition of claim 28.
Priority Claims (2)
Number Date Country Kind
21186366.7 Jul 2021 EP regional
21213711.1 Dec 2021 EP regional
CROSS-REFERENCE TO RELATED APPLICATIONS

This application claims priority to European Patent Applications 21213711.1, filed Dec. 10, 2021 and 21186366.7, filed Jul. 19, 2021, and claims priority to U.S. Provisional Patent Application 63/176,814, filed Apr. 19, 2021; the contents of which are incorporated herein by reference.

Provisional Applications (1)
Number Date Country
63176814 Apr 2021 US