Patent Application
20080297792
This application claims priority to Korean Patent Application No. 10-2007-0054023, filed on Jun. 1, 2007, and all the benefits accruing therefrom under 35 U.S.C. §119, the contents of which in its entirety is herein incorporated by reference.
1. Field of the Invention
The present invention relates to microfluidics, and more particularly, to a fluorescence detecting module for detecting fluorescence in a microchamber of a chip where a microreaction occurs, and a fluorescence detecting system having the same.
2. Description of the Related Art
Microfluidics are techniques in which a microchamber is formed on a chip using micromachining technology such as photolithography, hot-embossing or molding and the reaction of microfluid occurs in the microchamber. Microfluidics has advantages in that the amount of a consumed reagent can be reduced and an analysis time can be reduced. The microchamber is a space in which a microfluid to be analyzed is kept. A microchannel is connected to the microchamber and the microchamber includes a width which is larger or equal to the width of a microchannel having several tens to several hundreds of micrometers. A microreaction in the microchamber usually accompanies a biochemical reaction such as polymerase chain reaction (“PCR”), enzyme reaction or immunoassay, etc. In order to analyze the microreaction, fluorescence generated in the microchamber is detected.
In particular, when different temperatures are required in denaturation, annealing, and extension like in PCR, a temperature cycle is repeatedly applied so that a reaction can be performed. Due to a small reaction volume and a wide area, heat is rapidly transmitted to the microchamber to reduce a time required for the temperature cycle.
There are several conventional methods for detecting a PCR in real time. However, a conventional fluorescence detecting method is used in most apparatuses. Various fluorescence detecting methods have been developed. Such conventional methods include a method of using a fluorescence dye such as SYBR Green I which generates fluorescence by combining with a double strand DNA generated by PCR and a TaqMan® method in which a DNA sequence that can be combined between two primers used in PCR is used as a probe, fluorophore and quencher are combined at both ends of the probe, then if the probe is cut using exonuclease activity of Taq polymerase used in DNA synthesis, the fluorophore and the quencher are separated from each other and fluorescence occurs.
Currently, a biochemical reaction such as PCR is usually performed in a tube and various apparatuses for detecting fluorescence in the tube has been commercialized.
For example, U.S. Pat. No. 5,928,907 of Applied Biosystems discloses an apparatus for detecting fluorescence in a tube using optical fiber. The apparatus is advantageous in that a plurality of tubes can be detected by one detector. However, in order to condense excitation light for exciting fluorescence in the optical fiber, a well-collimated light source like a laser must be used. In addition, a precise optical apparatus is needed and thus the apparatus can be applied only to equipment having high throughput.
Further, U.S. Pat. No. 6,369,893 of Cepheid discloses an excitation block and a detection block. In this reference, fluorescence is excited using the excitation block using an LED, and a fluorescence signal is detected using the detection block positioned at 90 degrees and thus, the apparatus is advantageous to modulation. However, in order to perform excitation and detection at 90 degrees, a tube is formed to have a diamond shape and excitation and detection is performed two thin walls. Thus, since a sufficient space between the walls is needed, a sample volume of 25 μl or more is needed.
In addition, U.S. Pat. No. 7,081,226 of Idaho Technology discloses a method of using a capillary tube as a PCR reaction container. In this apparatus, an LED light source is collimated and is irradiated into the capillary tube through a lens, fluorescence generated in the tube is condensed on the same lens and is selectively reflected at 90 degrees using a dichroic mirror and the reflected fluorescence is detected. The apparatus is appropriate for a reaction container having a small diameter like the capillary tube but is not appropriate for a reaction container having a smaller thickness and larger area like a microfluid chip.
Further, U.S. Pat. No. 7,148,043 of MJ Research discloses an apparatus using a conventional well-structured thermal cycle, an LED light source is irradiated on a well and fluorescence is condensed and detected. The apparatus can detect a reaction solution having a volume of several tens of μL like a 96 or 384 well plate. However, in order to detect a reaction which occurs in a microchamber having a volume of less than several μL and a small depth of less than 500 μm, the size of a light source irradiated into the microchamber must be small and a focus distance of an optical system must be precisely maintained. Thus, the apparatus is not appropriate for detecting a reaction in the microchamber.
A conventional PCR reaction device is a large table top-shaped device and in general, a plastic well or tube is used as a reaction container and a very large thermal mass is used as a heating means like an aluminum block. Thus, the conventional PCR reaction device is inefficient as a heating and cooling speed is slow and power consumption is high.
Thus, a technology of using a microfluid chip in which a microchamber of which volume is minimized on a substrate formed of silicon or a silicon-based material having thermal conductivity as a reaction container is formed has been developed. In order to improve throughput, a plurality of microchambers are formed in the microfluid chip. Therefore, as a distance between microchambers is narrower than a distance between wells in a conventional well plate, many microreactions can be accepted per unit area. Thus, the technology is advantageous.
However, a fluorescence detector for detecting a microreaction that occurs in microchambers having a narrow distance generally uses a laser light source. In general, the laser light source having a wavelength used in fluorescence detection has a large size and a method of using optical fiber is used as a method for connecting a light source to a driving optical system. In this case, precise optical components are needed for coupling of a light source and an optical fiber and costs are increased.
The present invention has made an effort to solve the above-stated problems and aspects of the present invention provide a fluorescence detecting module having an optical system for detecting of fluorescence in a plurality of microchambers of a microfluid chip, and a fluorescence detecting system having the same.
According to an exemplary embodiment, the present invention provides a fluorescence detecting module which includes a light source which irradiates excitation light, a collimating lens which condenses excitation sight irradiated from the light source, a dichroic mirror which selectively transmits or reflects the light according to a wavelength thereof, an objective tens which condenses excitation light selected by the dichroic mirror to be irradiated on the sample in a microchamber and condenses fluorescence generated in the microchamber, a focusing lens which focuses fluorescence selected by the dichroic mirror, and a fluorescence detecting element which detects fluorescence focused by the focusing lens.
According to an exemplary embodiment, the light source is a light emitting diode (“LED”) having a surface emission shaped LED chip, and an emission surface of the LED chip is projected onto a sample in the microchamber as an optical spot having a predetermined area. The ratio of the area of the optical spot to the area of the emission surface of the LED chip is approximately 1 or less than 1. In addition, according to an exemplary embodiment, the optical spot is positioned in the microchamber. The optical spot may be positioned at the middle of the depth of the microchamber. Further, the emission surface of the LED chip includes a shape which is long in the lengthwise direction of the microchamber. According to an exemplary embodiment, the LED is an LED having no lens.
According to an exemplary embodiment, the collimating lens condenses excitation light into substantially parallel light.
According to an exemplary embodiment, the dichroic mirror is disposed to be inclined at approximately 45 degrees with respect to an optical axis of excitation light irradiated from the light source and selectively transmits, or reflects at right angles. excitation light and fluorescence according to respective wavelengths thereof.
According to an exemplary embodiment, the dichroic mirror reflects short-wavelength components of excitation light at right angles to be directed toward the objective lens and transmits long-wavelength components of the fluorescence to be directed toward the focusing lens.
According to an exemplary embodiment, the dichroic mirror transmits short-wavelength components of excitation light to be directed toward the objective lens and reflects long-wavelength components of the fluorescence at right angles to be directed toward the focusing lens.
According to an exemplary embodiment, the fluorescence detecting element is a photo diode having an active region or an Avalanche photo diode having an amplification capability.
According to an exemplary embodiment, the fluorescence detecting module further includes a first filter disposed between the collimating lens and the dichroic mirror and selects a wavelength of excitation light, and a second filter disposed between the dichroic mirror and the focusing lens and selects a wavelength of fluorescence. According to an exemplary embodiment, the first filter is disposed at right angles with respect to an optical axis of excitation light irradiated from the light source, and the second filter is disposed at right angles with respect to an optical axis of fluorescence that is directed towards the fluorescence detecting element. According to an exemplary embodiment, the first filter is a short-wavelength transmission filter which transmits short-wavelength components of excitation light, and the second filter is a long-wavelength transmission filter which transmits long-wavelength components of fluorescence. The first filter and the second filter may be dichroic filters.
According to an exemplary embodiment, the fluorescence detecting module further includes a base in which a first optical path, a second optical path, and a third optical path connected to one another are formed, and excitation light irradiated from the light source is projected onto a sample in the microchamber through the first optical path and the second optical path, and fluorescence generated in the microchamber reaches the fluorescence detecting element through the second optical path and the third optical path.
According to an exemplary embodiment, the light source is installed at an end of the first optical path, the objective lens is installed at an end of the second optical path, the fluorescence detecting element is installed at an end of the third optical path, the collimating lens is installed within the first optical path, and the focusing lens is installed within the third optical path, and the dichroic mirror is inserted and installed in a position in which the first optical path, the second optical path, and the third optical path meet one another to be inclined at approximately 45 degrees with respect to the optical axis of excitation light irradiated from the light source.
According to an exemplary embodiment, the second optical path and the third optical path are parallel to each other in a vertical direction and the first optical path is formed in a horizontal direction and meets the second optical path and the third optical path at right angles. The dichroic mirror is reflect short-wavelength components of excitation light which passes through the first optical path at right angles to be directed toward the objective lens through the second optical path, and the dichroic mirror transmits long-wavelength components of fluorescence which is generated in the microchamber and which passes through the second optical path to be directed toward the focusing lens through the third optical path.
According to another exemplary embodiment, the first optical path and the second optical path are parallel to each other in a vertical direction and the third optical path is formed in a horizontal direction and meets the first optical path and the second optical path at right angles. The dichroic mirror transmits short-wavelength components of excitation light which passes through the first optical path to be directed toward the objective lens through the second optical path, and the dichroic mirror reflects long-wavelength components of fluorescence which are generated in the microchamber and which passes through the second optical path at right angles to be directed toward the focusing lens through the third optical path.
According to an exemplary embodiment, a first filter which selects a wavelength of excitation light between the collimating lens and the dichroic mirror is installed in the first optical path, and a second filter which selects a wavelength of fluorescence between the focusing lens and the dichroic mirror is installed in the third optical path.
According to another exemplary embodiment, the present invention provides a fluorescence detecting system for a microfluid chip in which a plurality of microchambers are arranged, the system includes a frame, at least one fluorescence detecting module which detects fluorescence in the microchamber, a holder which supports the at least one fluorescence detecting module, a driver installed in the frame and allows the holder to make a reciprocating motion along a direction in which the plurality of microchambers are arranged, and a guide installed in the frame which supports the holder to be moved and guiding the movement.
According to an exemplary embodiment, a plurality of fluorescence detecting modules arranged in the same direction as the arrangement direction of the plurality of microchambers is installed in the holder. The plurality of fluorescence detecting modules detects at least two types of fluorescence having different wavelengths. Each of the plurality of fluorescence detecting modules irradiates excitation light having different wavelengths and detects fluorescence having different wavelengths.
According to an exemplary embodiment, the driver includes a lead screw combined with the holder and a driving motor rotating the lead screw.
According to an exemplary embodiment, the guide is long in the movement direction of the holder and supports upper and lower portions of the holder.
The above and/or other aspects, features and advantages of the present invention will become more apparent from the following detailed description when taken in conjunction with the accompanying drawings in which:
The invention now will be described more fully hereinafter with reference to the accompanying drawings, in which embodiments of the invention are shown. This invention may, however, be embodied in many different forms and should not be construed as limited to the embodiments set forth herein. Rather, these embodiments are provided so that this disclosure will be thorough and complete, and will fully convey the scope of the invention to those skilled in the art. Like reference numerals refer to like elements throughout.
It will be understood that when an element is referred to as being “on” another element, it can be directly on the other element or intervening elements may be present therebetween. In contrast, when an element is referred to as being “directly on” another element, there are no intervening elements present. As used herein, the term “and/or” includes any and all combinations of one or more of the associated listed items.
It will be understood that, although the terms first, second, third etc. may be used herein to describe various elements, components, regions, layers and/or sections, these elements, components, regions, layers and/or sections should not be limited by these terms. These terms are only used to distinguish one element, component, region, layer or section from another element component region, layer or section. Thus, a first element, component, region, layer or section discussed below could be termed a second element, component, region, layer or section without departing from the teachings of the present invention.
The terminology used herein is for the purpose of describing particular embodiments only and is not intended to be limiting of the invention. As used herein, the singular forms “a”, “an” and “the” are intended to include the plural forms as well, unless the context clearly indicates otherwise, it will be further understood that the terms “comprises” and/or “comprising,” or “includes” and/or “including” when used in this specification, specify the presence of stated features, regions, integers, steps, operations, elements, and/or components, but do not preclude the presence or addition of one or more other features, regions, integers, steps, operations, elements, components, and/or groups thereof.
Furthermore, relative terms, such as “lower” or “bottom” and “upper” or “top,” may be used herein to describe one element's relationship to another elements as illustrated in the Figures. It will be understood that relative terms are intended to encompass different orientations of the device in addition to the orientation depicted in the Figures. For example, if the device in one of the figures is turned over, elements described as being on the “lower” side of other elements would then be oriented on “upper” sides of the other elements. The exemplary term “lower”, can therefore, encompasses both an orientation of “lower” and “upper,” depending on the particular orientation of the figure. Similarly, if the device in one of the figures is turned over, elements described as “below” or “beneath” other elements would then be oriented “above” the other elements. The exemplary terms “below” or “beneath” can, therefore, encompass both an orientation of above and below.
Unless otherwise defined, all terms (including technical and scientific terms) used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs. It will be further understood that terms, such as those defined in commonly used dictionaries, should be interpreted as having a meaning that is consistent with their meaning in the context of the relevant art and the present disclosure, and will not be interpreted in an idealized or overly formal sense unless expressly so defined herein.
Exemplary embodiments of the present invention are described herein with reference to cross section illustrations that are schematic illustrations of idealized embodiments of the present invention. As such, variations from the shapes of the illustrations as a result, for example, of manufacturing techniques and/or tolerances, are to be expected. Thus, embodiments of the present invention should not be construed as limited to the particular shapes of regions illustrated herein but are to include deviations in shapes that result, for example, from manufacturing. For example, a region illustrated or described as flat may, typically, have rough and/or nonlinear features. Moreover, sharp angles that are illustrated may be rounded. Thus, the regions illustrated in the figures are schematic in nature and their shapes are not intended to illustrate the precise shape of a region and are not intended to limit the scope of the present invention. Hereinafter, exemplary embodiments of the present invention will be described in detail with reference to the accompanying drawings.
Referring to
According to an exemplary embodiment, the lower substrate 12 is formed of silicon, metal or plastics having a high thermal conductivity efficiency so as to facilitate heat transfer from the heater 13, and the upper substrate 11 is formed of a transparent material such as glass or transparent plastics so as to facilitate fluorescence detection. According to an exemplary embodiment, the upper substrate 11 and the lower substrate 12 are bonded to each other using anodic bonding, thermal bonding or bonding using an adhesive. Further, according to an exemplary embodiment, the sample inlet 21, the sample outlet 22, and the microchamber 25 and the microchannels 23 and 24 are formed using a method such as photolithography, hot-embossing, blasting or plastic molding.
Further, according to an exemplary embodiment, the microfluid chip 10 comprises a plurality of microchambers 25 and a plurality of microchannels 23 and 24 to detect various reactions with respect to a variety of types of samples or one type of sample. According to an exemplary embodiment, the plurality of microchambers 25 are arranged one-dimensionally, that is, in along one direction. This is because, unlike a conventional well plate, for example, unlike a microtiter plate, when the microchambers 25 are arranged two-dimensionally, the microchannels 23 and 24 must pass between the microchambers 25 and thus, a structure of a microfluid chip becomes complicated.
According to an exemplary embodiment, when the microchambers 25 are arranged one-dimensionally, the width of the microchambers 25 is larger than that of the microchannels 23 and 24 so that an area detected with respect to an incoming sample can be maximized. In order to arrange a plurality of microchambers 25 in a predetermined area, a distance between microchambers 25 is gradually reduced. As such, according to an exemplary embodiment, the width of the microchambers 25 is less than 1.5 mm and a distance between centers of the microchambers 25 is less than approximately 2 mm.
Referring to
Specifically, in the current exemplary embodiment, the light source 110 irradiates excitation light used to excite fluorescence. The collimating lens 120 is disposed in front of the light source 110, for example, a light emitting diode (“LED”) 110 and condenses excitation light which is irradiated at a predetermined angle from the light source 110 into substantially parallel light. The dichroic mirror 124 is disposed to be inclined at 45 degrees with respect to an optical axis C of excitation light The dichroic mirror 124 transmits long-wavelength components of excitation light that are similar to a fluorescence wavelength and reflects short-wavelength components of excitation light which pass through the collimating lens 120 at right angles. Excitation light reflected by the dichroic mirror 124 is condensed by the objective lens 126 and is irradiated on a sample in the microchamber 25 of the microfluid chip 10.
Fluorescence, which is generated in the microchamber 25 by irradiating excitation light, is condensed by the objective lens 126 to approximately parallel light. Fluorescence which is condensed by the objective lens 126 transmits the dichroic mirror 124 which transmits long-wavelength components, as described above. Fluorescence, which has transmitted the dichroic mirror 124, is focused by the focusing lens 129 and is irradiated on the fluorescence detecting element 130, for example, a photo diode 130 having an active region 132. The photo diode 130 generates an electrical signal corresponding to the received fluorescence. According to an exemplary embodiment, the fluorescence detecting element 130 comprises an Avalanche photo diode having an amplification capability.
According to an exemplary embodiment, the fluorescence detecting module 100 further comprise a first filter 122 and a second filter 128. The first filter 122 is disposed between the collimating lens 120 and the dichroic mirror 124, and is a snort-wavelength transmission filter which reflects long-wavelength components of excitation light that are similar to fluorescence wavelength and transmits short-wavelength components of excitation light. The second filter 128 is disposed between the dichroic mirror 124 and the focusing lens 129. The second filter 128 is a long-wavelength transmission filter which transmits long-wavelength fluorescence and reflects short-wavelength excitation light which may act as a background signal. According to an exemplary embodiment, long-wavelength components, which are similar to fluorescence light irradiated on the sample in the microchamber 25, are minimized by the first filter 122, and short-wavelength excitation light which is included in fluorescence irradiated on the photo diode 130 and which acts as a background signal is minimized by the second filter 128.
Specifically, in the current exemplary embodiment, the light source 210 irradiates excitation light used to excite fluorescence. The collimating lens 220 is disposed in front of the light source 210 and condenses excitation light which is irradiated at a predetermined angle from the light source 210 into parallel light. The dichroic mirror 224 is disposed to be inclined at 45 degrees with respect to an optical axis C of excitation light. The dichroic mirror 224 reflects long-wavelength components of excitation light which are similar to a fluorescence wavelength and transmits short-wavelength components of excitation light which passes through the collimating lens 220. Excitation light, which transmits through the dichroic mirror 224, is condensed by the objective lens 226 and is irradiated on a sample in the microchamber 25 of the microfluid chip 10.
Fluorescence which is generated in the microchamber 25 by irradiation of excitation light, is condensed by the objective lens 226 into approximately parallel light. Fluorescence, which is condensed by the objective lens 226, is reflected by the dichroic mirror 224 which reflects long-wavelength components as described above at right angles. Fluorescence, which is reflected by the dichroic mirror 224, is focused by the focusing lens 229 and is irradiated on the fluorescence detecting element 230, for example, a photo diode 230 having an active region 232. The photo diode 230 generates an electrical signal corresponding to received fluorescence from the received fluorescence.
According to an exemplary embodiment, the fluorescence detecting module 200 further comprises a first filter 222 and a second filter 228. The first filter 222 is disposed between the collimating lens 220 and the dichroic mirror 224, and is a short-wavelength transmission filter which reflects long-wavelength components of excitation light which are similar to fluorescence wavelength and transmits short-wavelength components of excitation light. The second filter 228 is disposed between the dichroic mirror 224 and the focusing lens 229. The second filter is a long-wavelength transmission filter which transmits long-wavelength fluorescence and reflects short-wavelength excitation light which acts as a background signal. The long-wavelength components which are similar to fluorescence light irradiated on the sample in the microchamber 25, are minimized by the first filter 222, and short-wavelength excitation light which is included in fluorescence irradiated on the photo diode 230 and acts as a background signal, are minimized by the second filter 228.
In the fluorescence detecting modules 100 and 200 shown in
According to an exemplary embodiment, the width of the LED chips 112 and 212 is approximately more than approximately 0.2 mm. Thus, even when the ratio is 1, the width of the optical spot S2 is more than approximately 0.2 mm. Thus, the distance between the microchambers 25 is more than approximately 0.2 mm. As described above. In order to arrange a large number of microchambers 25 in a predetermined area, the distance between the microchambers 25 is less than approximately 2 mm.
The quantity of excitation light irradiated from the LED chips 112 and 212 increases as the area of the emission surface S1 increases. As such, the area of the optical spot S2 of excitation light irradiated on the sample in the microchamber 25 also increases and fluorescence can be more efficiently generated. However, as described above, the width of the optical spot S2 is limited so that excitation light irradiated on the sample in a microchamber 25 does not affect the other adjacent microchambers 25. In order to satisfy the limitation and increase the area, of the optical spot S2, as illustrated in
A conventional LED is provided to have a shape in which an LED chip is molded in transparent plastic. A structure in which transparent plastic are made to have a shape that acts as a lens and the irradiation angle of light irradiated from the LED chip is reduced is usually used as an LED. However, in this case, due to an error in a manufacturing process, a difference in positions of the LED chips molded in plastics may occur. As such, irradiation patterns may be changed. Thus, the LEDs 110 and 210 each having no lens may be used in the present invention.
In the fluorescence detecting modules 100 and 200 shown in
As illustrated in
Thus, in the present invention, light of which the incidence angle is near 45 degrees needs to pass through the dichroic mirrors 124 and 224 as much quantity as possible. Thus, the distance between the LEDs 110 and 210 and the collimating lenses 120 and 220 may be designed so that excitation light irradiated from the LEDs 110 and 210 can be condensed by the collimating lenses 120 and 220 to be as near to parallel light as possible.
Referring to
According to the current exemplary embodiment, the dichroic mirror 124 is inserted and installed at the position in which the first optical path 141, the second optical path 142, and the third optical path 143 meet one another, to be inclined at 45 degrees with respect to the optical axis of excitation light that is irradiated from the LED 110. The dichroic mirror 124 is fixed by a mirror fixing spring 144 and a mirror support jaw 145 in a correct position at an accurate angle. Further, an adhesive may be additionally used to more firmly fix the dichroic mirror 124. The collimating lens 120 is installed in the first optical path 141 at right angles with respect to the optical axis of excitation light, and the focusing lens 129 is installed in the third optical path 143 at right angles with respect to the optical axis of fluorescence which is directed toward the photo diode 130. The first filter 122 is inserted and installed in the first optical path 141 between the collimating lens 120 and the dichroic mirror 124 at right angles with respect to the optical axis of excitation light, and the second filter 128 is inserted and installed in the third optical path 143 between the focusing lens 129 and the dichroic mirror 124 at right angles with respect to the optical axis of fluorescence. The first filter 122 and the second filter 128 are fixed by filter fixing springs 148 and 147.
Referring to
According to the current exemplary embodiment, the dichroic mirror 224 is inserted and installed at the position in which the first optical path 241, the second optical path 242, and the third optical path 243 meet one another, to be inclined at 45 degrees with respect to the optical axis of excitation light that is irradiated from the LED 210. According to an exemplary embodiment, the dichroic mirror 224 is fixed by a mirror fixing spring 244 and a mirror support jaw 245, in a correct position at an accurate angle. According to another exemplary embodiment, an adhesive may be additionally used to more firmly fix the dichroic mirror 224. The collimating lens 220 is installed in the first optical path 241 at right angles with respect to the optical axis of excitation light, and the focusing lens 229 is installed on the third optical path 243 at right angles with respect to the optical axis of fluorescence that is directed toward the photo diode 230. The first filter 222 is inserted and installed on the first optical path 241 between the collimating lens 220 and the dichroic mirror 224 at right angles with respect to the optical axis of excitation light, and the second filter 228 is inserted and installed on the third optical path 243 between the focusing lens 229 and the dichroic mirror 224 at right angles with respect to the optical axis of fluorescence. The first filter 222 and the second filter 228 may be fixed by filter fixing springs 246 and 247.
According to an exemplary embodiment, in the fluorescence detecting modules 100 and 200 shown in
According to an exemplary embodiment, the optical components of the fluorescence detecting modules 100 and 200 may be assembled on the same bases 140 and 240 regardless of wavelengths to be detected in order to improve a condensing efficiency according to wavelengths, a distance between the collimating lenses 120 and 220 and the LEDs 110 and 210 may be slightly modified within the range of approximately 0.1 mm. However, other optical components may be used without adjustment of installation positions even when wavelengths to be detected are changed.
Referring to
Fluorescence dyes having various colors may be used in fluorescence detection in a real-time PCR reaction. One kind of fluorescence dye may be used in one microchamber 25 but various kinds of fluorescence dyes may be used together in one microchamber 25. In addition, different kinds of fluorescence dyes may also be used in each of a plurality of microchambers 25. In this case, the fluorescence detecting system 300 may have a plurality of fluorescence detecting modules 100 having wavelength selectivity so as to detect various fluorescence wavelengths. To this end, a plurality of, for example, six fluorescence detecting modules 100 may be installed in the holder 320 while being arranged in the same direction as the arrangement direction of the microchamber 25.
The guides 331 and 332 are long in the movement direction of the holder 320 and support the upper and lower portions of the holder 320. According to an exemplary embodiment, the driver 340 comprises a lead screw 341 and a driving motor 342 which rotates the lead screw 341. The lead screw 341 is combined with a connection member 322 that is disposed in the holder 320 and allows the holder 320 and the fluorescence detecting module 100 to make a reciprocating motion due to its rotation. In the current exemplary embodiment of the present invention, the pitch of the lead screw 341 is approximately 3 mm and a rotation angle thereof is approximately 18 degrees. The lead screw 341 is designed in 20 steps and the holder 320 is moved by 150 μm per step.
The fluorescence detecting system 300 according to the present invention moves the fluorescence detecting module 100 along the arrangement direction of a plurality of microchambers 25 of the microfluid chip 10 and scans the fluorescence detecting module 100, thereby detecting fluorescence. In this case, a scanning distance must be more than a value that is the sum of the distance between optical axes of the first and last fluorescence detecting modules 100 and the overall width of the microfluid chip 10. For example, when the width of each of the fluorescence detecting modules 100 is approximately 5.8 mm and the overall width of the microfluid chip 10 is approximately 15 mm, the scanning distance must be more than approximately 48.6 mm.
As described above, the fluorescence detecting system 300 according to the present invention comprises the fluorescence detecting module 100 shown in
Experiments for detecting fluorescence generated in the microchambers 25 of the microfluid chip 10 using the fluorescence detecting system 300 shown in
Six fluorescence detecting modules 100 were installed in the fluorescence detecting system 300, and six LEDs 110 for generating excitation light having different wavelengths were installed in the six fluorescence detecting modules 100. Wavelength spectrums of the LEDs 110 installed in the six fluorescence detecting modules 100 installed in the fluorescence detecting system 300 according to the present invention for the experiments is shown in
As shown in
Short-wavelength transmission filters each having a central wavelength of 390 nm, 495 nm, 545 nm, 610 nm, 645 nm, and 695 nm were used as the first filter 122 installed in the six fluorescence detecting modules 100. Long-wavelength transmission filters each having a central wavelength of 420 nm, 510 nm, 560 nm, 625 nm, 660 nm, and 710 nm were used as the second filter 128. Dichroic mirrors 124 each having a central wavelength of 400 nm, 505 nm, 555 nm, 620 nm, 655 nm, and 705 nm were used. When a distance between 10% T˜90% T transmission wavelengths is a filter width, short-wavelength transmission filters and long-wavelength transmission filters each having a filter width of less than approximately 10 nm were used and the dichroic mirrors 124 each having a filter width of less than 20 nm were used.
In this example, JD1580 made by Juraron was used as the objective lens 126, and S1227-33BR made by Hamamatus was used as the photo diode 130. A current signal outputted from the photo diode 130 was converted into a voltage signal through an amplification circuit and was digitalized using an analog digital converter (“ADC”), and a current-to-voltage gain was measured to have a 1×109 gain and was recorded by a computer.
A lower substrate 12 of the microfluid chip 10 used in experiments was manufactured by wet etching a silicon substrate having a thickness of 0.5 mm and by forming microchannels 23 and 24 and the microchambers 25, and an upper substrate 11 of the microfluid chip 10 was manufactured by forming a sample inlet 21 and a sample outlet 22 in a pyrex glass having a thickness of 0.5 mm using a sandblasting process. Eight microchambers 25 were formed in the lower substrate 12, and the distance between the microchambers 25 was 2 mm, the width of each of the microchambers 25 was approximately 1.5 mm, and the depth of each of the microchambers 25 was 200 μm.
PH 9.8, 100 mM of a sodium borate buffer solution was injected into one of the eight microchambers 25, pH 7.8, 100 mM of TE buffer in which 100 μM of 10T-oligonucleotide in which different kinds of fluorescence dyes were combined was injected into the other seven microchambers 25. Biosearch blue, 6-FAM, JOE, ROX, Texas Red, Quasar 570, and Quasar 670 were used as fluorescence dyes
In the state where six fluorescence detecting modules 100 manufactured as described above are operated one by one, the fluorescence detecting modules 100 were oscillated at a maximum frequency of 3000 Hz in a ⅛ microstep and detected fluorescence generated in the microchambers 25. Fluorescence spectrums detected by the fluorescence detecting module 100 according to the present invention as a result of experiments is shown in
As described above, in the fluorescence detecting module according to the present invention, the optical spot of excitation light irradiated on the microchambers is optimized, and even when the distance between a plurality of microchambers is narrower than less than approximately 2 mm, excitation light does not affect the adjacent microchambers and fluorescence in a particular microchamber can be detected.
Furthermore, the fluorescence detecting module according to the present invention uses an LED and a photo diode, and a lens having a diameter of a clear aperture less than approximately 4 mm such that the overall size of optical components is reduced, a fluorescence detecting module having a very small size is implemented, an optical path is reduced, the angle of optical components is reduced, and the size of an allowable error according to the angle of optical components and position tolerance is increased.
In addition, in the fluorescence detecting system according to the present invention, since the size of the fluorescence detecting module is reduced, a driving means is simple and becomes small, fluorescence is detected using a scanning method, and a fluorescence detecting time is reduced.
While the present invention has been shown and described with reference to some exemplary embodiments thereof, it should be understood by those of ordinary skill in the art that various changes in form and details may be made therein without departing from the spirit and scope of the present invention as defined by the appending claims.
| Number | Date | Country | Kind |
|---|---|---|---|
| 10-2007-0054023 | Jun 2007 | KR | national |
