Funtional fragment of the lectine receptor

[0001] The present invention relates to a functional fragment of a receptor, important in signaling. Particularly, the present invention relates to a functional fragment of the leptin receptor, involved in SOCS3, CIS and/or Vav signaling.

[0002] Leptin, an adipocyte derived hormone, delivers its appetite suppressing signals by passing the blood-brain barrier and by binding to the specific signaling form of its receptor in certain nuclei of the hypothalamus. In this way it constitutes a feedback mechanism regulating adipose tissue mass. Mutations within the leptin system result in a marked obese phenotype and impaired endocrinological functioning (Zhang et al., 1994, Chen et al., 1996). Although the long signaling form of the leptin receptor shows high expression levels in these hypothalamic nuclei, it is also expressed in several peripheral tissues including lung, liver, lymph nodes and gonads (Tartaglia et al., 1995, Ghilardi et al., 1996). This leads to the involvement of leptin in several peripheral functions, making it a typical pleiotropic cytokine.

[0003] Until today the therapeutic use of leptin as a weight-reducing agent remains limited (Heymsfield et al., 1999). It is observed that in most obese people a strong correlation exists between adipose mass and leptin levels, a phenomenon often explained by leptin resistance (Maffei et al., 1995). A number of possible explanations for this resistance have been suggested: a saturable transport through the blood-brain barrier resulting in a limited leptin activity in the hypothalamus (Schwartz et al., 1996, El Haschimi et al., 2000), cross-talk with the glucocorticoid system (Zakrzewska et al., 1997), or defects at the leptin receptor level, such as elevated expression of the signaling inhibitor SOCS3 (Bjorbaek et al., 1998).

[0004] Recently, it became clear that leptin is not only playing a role in regulating food intake, but functions in angiogenesis (Sierra-Honigmann et al., 1998) and in invasiveness of kidney and colonic epithelial cells (Attoub et al., 2000) have been demonstrated.

[0005] Being a member of the type 1 cytokine receptor family, the leptin receptor is activated by cross-phosphorylation of associated JAK kinases, most likely JAK2 and/or JAK1 (Bjorbaek et al., 1997, Banks et al., 2000). Activation of the leptin receptor leads to recruitment of signaling molecules containing phosphotyrosine binding SH2 modules. Signal Transducers and Activators of Transcription (STAT) molecules (Baumann et al., 1996, Vaisse et al., 1996) and the receptor-associated SH2-containing phosphatase SHP-2 (Carpenter et al., 1998, Li and Friedman, 199) are both recruited in the activated leptin receptor complex. Leptin mediated activation of Mitogen Activated Protein Kinases (MAPK) and Insulin Receptor Substrate (1 (IRS-1) has been shown in various cell systems (Cohen et al., 1996, Bjorbaek et al., 1997, Takahashi et al., 1997, Banks et al., 2000). Promotion of invasiveness by leptin seems to be mediated by phosphoinositide 3-kinase, Rho- and Rac-dependent signaling pathways (Attoub et al., 2000)

[0006] Leptin rapidly induces Cytokine-Inducible SH2-containing protein (CIS), both in vitro and in vivo. Leptin can also strongly and rapidly induce the production of the signal transduction inhibitor Suppressor of Cytokine Signaling 3 (SOCS3) in various cell types and in vivo (Bjorbaek et al., 1998, Emilsson et al., 1999, Waelput et al., 2000). Both CIS and SOCS3 are members of an expanding family of SH2 containing proteins which are typically built up of a pre-SH2 domain, a central SH2 domain, and a highly conserved SBCS box sequence. The latter motif is also found in a number of other signaling molecules (Hilton et al., 1998) and seems to be connected with proteasome function (Zhang et al., 1999). The observation that the leptin resistant Ayla mutant mice strain shows elevated SOCS3 levels makes this protein a possible mediator of leptin resistance (Bjorbaek et al., 1998).

[0007] Recently it has been shown that a tyrosine recruitment site within gp130, the signaling component of the IL-6 complex, is required for binding and thus for the inhibitory activity of SOCS3 (Nicholson et al., 2000, Schmidt et al., 2000). This is in contrast to SOCS1, which binds directly to JAK kinases and directly inhibits their kinase activity (Yasukawa et al., 1999). Similar results have been obtained for the insulin receptor and the erythropoietin receptor (Emanuelli et al., 2000, Sasaki et al., 2000).

[0008] In previous studies, it has been shown that leptin induces two gene sets in the PC12 rat pheochromocytoma cell line stably expressing the mouse leptin receptor. Many of these genes appear to be regulated in vivo (Waelput et al., 2000). Using a mutational approach it was shown that in the mouse leptin receptor residue Y985 is involved in a negative feedback signal, and furthermore that this effect is more pronounced when mutated in concert when another tyrosine, Y1077 (Eyckerman et al., 1999). However, phosphorylation of this tyrosine has never been demonstrated, suggesting that this site was playing only a minor role. Surprisingly, we found that a short functional fragment around said Y1077 is sufficient for SOCS3 and CIS binding and/or signaling. Moreover, we were able to demonstrate that said functional fragment is also sufficient for Vav signaling. Vav seems to be a general signaling molecule, but has never been shown to be involved in leptin signaling. Said short functional sequence is extremely conserved, which makes it an attractive target for pharmaceutical compositions modulating SOCS3, CIS and/or Vav mediated signaling in general, and leptin induced signaling in particular.

[0009] A first aspect of the invention is to provide a functional fragment of a receptor, comprising a sequence selected from the group consisting of SEQ ID N° 1, SEQ ID N° 2, SEQ ID N° 3 and SEQ ID No° 4, preferably essentially consisting of a sequence selected from the group consisting of SEQ ID N° 1, SEQ ID N° 2, SEQ ID N° 3 and SEQ ID N° 4, more preferably consisting of a sequence selected from the group consisting of SEQ ID N° 1, SEQ ID N° 2, SEQ ID N° 3 and SEQ ID N° 4. Preferably, said functional receptor fragment essentially consists of a sequence consisting of SEQ ID N° 5 or SEQ ID N° 6, more preferably, said functional receptor fragment consists of a sequence consisting of SEQ ID N° 5 or SEQ ID N° 6. Preferentially, said functional fragment is involved in SOCS3, CIS and/or Vav signaling when it consists of SEQ ID N°1, SEQ ID N° 2 or SEQ ID N° 6, and involved in Vav signaling when it consists of SEQ ID N° 3, SEQ ID N° 4 or SEQ ID N° 5. In the cases where the sequence comprises a tyrosine residue, the functional fragment may be phosphorylated on said residue or not. In case of SOCS3 and CIS signaling, said tyrosine residue is preferentially phosphorylated. The phosphorylation may be carried out by an associated kinase, e.g. a JAK kinase such as JAK2, that binds on another domain of the receptor, or by a kinase activity inherent to the receptor itself. Indeed, although the functional fragment is derived from the cytoplasmic domain of the leptin receptor, it is evident for the person skilled in the art that it can be incorporated in other receptors such as, as a non limiting example, the cytokine receptor family or the protein tyrosine kinase family, where it can function as recruitment site for signaling molecules.

[0010] It is a further aspect of the invention to use said functional fragment to modulate ligand induced signaling. Indeed, said functional fragment is involved in SOCS3 signaling, which is know to be a suppressor of cytokine signaling. Incorporation of said functional fragment in a cytokine receptor is therefore expected to modulate the cytokine induced signaling. A similar effect is expected in other receptors due to the involvement of Vav signaling. A preferred embodiment is the use of said functional fragment to modulate leptin induced signaling. Such modulation may not only be useful in food intake disorders and regulation of body weigth, but also in other leptin-mediated phenomena such as angiogenesis, wound healing, and susceptibility to digestive cancers. Especially the modulation of the latter may be important, as Vav has been shown to bind to said functional fragment, and Vav is know to act as a guanosine nucleotide exchange factor for Rac-1, which is involved in leptin-induced invasiveness of kidney and colonic epithelial cells (Attoub et al., 2000)

[0011] Another aspect of the invention is the use of said functional fragment to screen compounds that interfere with the binding of said functional fragment with a signaling molecule. Indeed, a receptor can be constructed, wherein said functional fragment is the only functional fragment, such as, as a non-limiting example, a mouse leptin receptor in which the tyrosine residues at positions 985 and 1138 have been replaced by a phenylalanine. This receptor, comprising the functional fragment, may be expressed in a suitable host cell. Binding of a ligand on said receptor may induce a reporter gene, whereby the induction is mediated by binding of a signaling molecule on the functional fragment. By bringing said host cell in contact with a library of small molecules, or by transfecting said host cell by a library encoding potentially inhibiting peptides, compounds inhibiting the binding of a signaling molecule with said functional fragment can be identified by selecting those host cells that do not show an induction of the reporter gene anymore upon contacting said receptor with its ligand. Alternatively, the induction of the signaling pathway as such may be monitored, instead of the induction of a reporter gene.

[0012] Still another aspect of the invention is a compound, isolated by the use of said functional fragment. Said compound can be, as a non-limiting example, a soluble peptide having the same sequence as said functional fragment, or a peptido-mimetic thereof, an antibody, binding to said functional fragment, or an antibody binding to a domain in SOCS3, CIS or Vav that binds directly or indirectly to said functional fragment.

[0013] Definitions

[0014] Functional fragment as used here is a peptide or polypeptide, optionally carrying one or more modifications, which, when integrated in a suitable receptor molecule, will function as a binding site for one or more signaling molecules. This binding may be either constitutive or ligand induced.

[0015] Modification as used here may be any modification of an amino acid, known to the person skilled in the art, such as, as a non-limiting example, phosphorylation, glycosylation or ubiquitinylation.

[0016] Essentially consisting as used here means that the cited SEQ ID is embedded in a total functional fragment of only 50 amino acids, preferably only 30 amino acids, even more preferably only 20 amino acids.

[0017] Compound means any chemical or biological compound, including simple or complex organic or inorganic molecules, peptides, peptido-mimetics, proteins, antibodies, carbohydrates, nucleic acids or derivatives thereof.

[0018] Bind(ing) means any interaction, be it direct or indirect. A direct interaction implies a contact between the binding partners. An indirect interaction means any interaction whereby the interaction partners interact in a complex of more than two compounds. The interaction can be completely indirect, with the help of one or more bridging molecules, or partly indirect, where there is still a direct contact between the partners, which is stabilized by the additional interaction of one or more compounds

[0019] Signaling molecule as used here means any molecule that is involved in the transfer or the inhibition of the transfer of an activated receptor to a reporter gene. In that respect, a molecule that is not directly involved in signaling itself, but that, by binding on the receptor can inhibit another molecule from binding and inducing the signaling pathway is also considered as a signaling molecule.

[0020] Reporter gene is any gene that leads to a detectable signal and can be, as a non-limiting example, an antibiotic resistance gene, a toxin gene resulting in cell death, a gene encoding a fluorescent protein such as GFP, or a gene encoding an enzyme activity such as β-galactosidase. The coding sequence is placed under control of a suitable promoter, i.e. a promoter that is induced by binding of a ligand to the receptor and consequent induction of the reporter pathway.

BRIEF DESCRIPTION OF THE FIGURES

[0021]
FIG. 1: Expression of SOCS3 leads to inhibition of leptin-induced rPAP1 expression in PC12 cells

[0022] PC12 LR8 cells were co-transfected with a plasmid encoding SOCS3 (pMET7fSOCS3) or empty vector (mock, pMET7), and a pGL3-rPAP1luci reporter construct. 48 h after transfection, the cells were stimulated with leptin or left untreated. Luciferase activity was measured in triplicate after 24 h. CPS: absolute luminescence counts per second; NS: non-stimulated negative control.

[0023]
FIG. 2: (A) Schematic representation of the long isoform of the murine leptin receptor (LRlo), showing extracellular (EC), transmembrane (TM) and intracellular (IC) parts. The Box1 motif and the three tyrosines involved in signal transduction are also shown. (B) Y985F and Y985/1077F, but not Y1077F mutations in the leptin receptor lead to augmented levels of SOCS3 mRNA. PC12 cells were transiently transfected with plasmids encoding different leptin receptor variants and were stimulated with leptin for 24 h. Northern blot analysis was performed on lysates using a rat SOCS3 probe. A β-actin probe was used for mRNA quantitation. Induction of SOCS3 is also shown for PC12LR8 cells stably expressing the murine leptin receptor. LR: leptin receptor; sh: short isoform; lo: long isoform; F3: all cytoplasmic tyrosines mutated to phenylalanine.

[0024]
FIG. 3: SOCS3-mediated inhibition of leptin signaling is critically dependent on the presence of either Y985 or Y1077 in the murine leptin receptor

[0025] Hek293T cells were transiently co-transfected with plasmids encoding different leptin receptor variants, SOCS3 or empty vector, together with the pXP2d2-rPAP1luci reporter construct. (A) LR expression levels were measured on transfected cells by incubation for 90′ with Leptin-SEAP fusion protein with or without excess leptin (100×). Bars show mean value and SD values of triplicate measurements. (B) The transfected cells were either stimulated for 24 h with leptin or left untreated. Luciferase measurements were performed in triplicate and were normalized by co-transfection with the pUT651 β-galactosidase construct and a β-galactosidase activity assay. Results are shown in fold induction. (C) Western blot analysis of SOCS3 expression. The FLAG-tagged SOCS3 protein was revealed in lysates of transfected cells using anti-FLAG antibody. CPS: absolute luminescence counts per second; LR10: leptin receptor long isoform.

[0026]
FIG. 4: SOCS3 binding to peptides matching leptin receptor Y985 and Y1077 sites is phosphorylation dependent

[0027] Lysates of Hek293T cells overexpressing FLAG-tagged SOCS3 protein were incubated with peptides matching leptin receptor Y985 and Y1077 sites, either phosphorylated or not. Specific binding of SOCS3 was revealed by immunoblotting using an anti-FLAG antibody.

[0028]
FIG. 5: CIS interacts with the Y985 and Y1077 motifs in the leptin receptor

[0029] HEK293T cells were transiently cotransfected with the pXP2d2-rPAP1luci, pMG1-CIS and pMET7-LR mutants as indicated. 36 hours post transfection, cells were stimulated with leptin for 24 hours (open bars) or were left untreated (solid bars). Luciferase activity is indicated as the mean of triplicate measurements +/−SD. β-galactosidase activity from pUT651 was used to normalise for variations in transfection efficiencies. CPS: light counts per second.

[0030]
FIG. 6: Functionality of mLR F3 deletion and point mutants

[0031] Cells were transfected with

[0032] a. pMET7-mLR F3+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0033] b. pMET7-mLR F3 Del1+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0034] c. pMET7-mLR F3 Del2+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0035] d. pMET7-mLR F3 Del3+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0036] The results are presented as fold induction compared to the non-stimulated negative control.

[0037] (L: stimulation with leptin; NC: non-stimulated negative control)

[0038]
FIG. 7: CIS2 binds to both the Y985 and Y1077 motifs in the leptin receptor

[0039] HEK293T cells were transiently cotransfected with the pXP2-rPAP1luci, pMG1-CIS2 and pMET7-LR mutants as indicated. 36 hours post transfection, cells were stimulated with leptin for 24 hours (open bars) or were left untreated (solid bars). Luciferase activity is indicated as the mean of triplicate measurements +/−SD/β-galactosidase activity from pUT561 was used to normalize for variations in transfection afficiencies. CPS: light counts per second.

[0040] (L: stimulation with leptin; NC: non-stimulated negative control)

EXAMPLES

Materials and Methods to the Examples

[0041] Antibodies, Growth Factors and Peptides

[0042] Monoclonal anti-FLAG antibody M2 was obtained from Sigma. Mouse recombinant leptin was purchased from R&D Systems. Peptides were synthesized using standard Fmoc-amino-acid solid phase chemistry on an Applied Biosystems Model 431A peptide synthesizer. Biotin was esterified manually following similar procedures as on the synthesizer, and added to the reaction mixture. Incorporation of phosphotyrosine was realized by using a protected Fmoc-tyrosine-phosphobenzylester (Novabiochem). After purification, mass of the peptides was confirmed by mass spectrometry. Sequences of the peptides used were biotin-QRQPSVK(p)Y985ATLVSNDK and biotin-NHREKSVC(p)Y1077LGVTSVNR.

[0043] Vectors

[0044] Generation of the Leptin Receptor Mutants, the LepR F3 Deletion and mLR F3 Point Mutants

[0045] Generation of the leptin receptor mutants was described by Eyckerman et al. (1999). The mutant leptin receptor (long isoform) is indicated as mLR. MLR F3 is the mutant where all the cytoplasmic residues are mutated to phenylalanine.

[0046] Through site-directed mutagenesis (Quikchange™, Stratagene) three deletion and one point mutant of the mLR F3, cloned in the pMET7 expression vector, were constructed. The deletion mutants LR F3 Del1 (aa: 1-1103), LR F3 Del2 (aa: 1-1050) and LR F3 Del3 (aa: 1-952) were created by mutating Ala on position 1104 (primer combinations MBU-O-993 and MBU-O-994), Ser on position 1051 (primer combination MBU-O-885 and MBU-O-886), and Cys on position 953 (primer combination MBU-O-887 and MBU-O-888), to a STOP-codon, respectively. In each case an extra EcoRV restriction site was built in simultaneously to distinguish mutated from parental DNA.

[0047] Construction of pME77fSOCS3

[0048] Rat SOCS3 cDNA was amplified using 5′-GAAGATCTGTGCGCCATGGTCACCCACAGCAAGTT and 5′-GCTCTAGATTTTGCTCCTTAAAGTGGAGCATCATA as forward and reverse primer respectively, and using mRNA from leptin-stimulated PC12 cells as template. cDNA was prepared using a standard RT procedure with Superscript Reverse Transcriptase (LifeTechnologies). Amplification was realized using Pfu polymerase (Stratagene). The SOCS3 fragment was reamplified using forward primer 5′-GCGAGATCTCAGAATTCGTCACCCACAGCAAGTTTCC and the reverse primer described above, which allows BglII-XbaI based cloning in a pMET7 variant containing a N-terminal FLAG tag sequence (MDYKDDDDK), resulting in pMET7fSOCS3.

[0049] Construction of pMG1-CIS

[0050] CIS constructs were generated in the pMET7 vector, under control of the SRα promoter. Using site-directed mutagenesis (Quikchange™, Stratagene) a unique ApaI restriction site was generated between the SRα promoter and the EcoRI site in the pMET7mcs construct, a pMET7-derivative containing a multiple cloning site. The 158 amino acid C-terminal part of human gp130 was amplified using primers 5′GACGGGCCCGCCACCATGGATTACAAGGATGACGACGATAAGATCTCGACCGT GGTACACAGTGGC and 5′GCGAATTCCGAACCGCCCTGAGGCATGTAGCCGCC. The forward primer also encodes the FLAG-tag sequence (MDYKDDDDK) and contains ApaI and BglII sites. The reverse primer contains a GGS hinge sequence and an EcoRI restriction site allowing ApaI-EcoRI based cloning in the pMET7 construct, resulting in the pMG1 basic vector.

[0051] A fragment of the SV40-T antigen (amino acid 261-708) was amplified using primers 5′GCGAATTCGAAGCAGAGGAAACTAAACAAGTG and 5′CGTCTAGAGCGGCCGCA GATCTCGAGTCGCGATTATGTTTCAGGTTCAGGGGGAG. The N-terminal part of SV40-T containing the nuclear localisation signal was deleted to prevent nuclear shuttling. The forward primer contains an EcoRI site and the reverse primer contains a stop codon and NruI, XhoI, BglII, NotI and XbaI restriction sites. Ligating this fragment in the pMG1 vector results in the pMG1-SVT vector.

[0052] Murine CIS was amplified with forward primer 5′GCGGAATTCGTCCTCTGCGTACAG GGATC and with reverse primer 5′GCCTCTAGATCAGAGTTGGAAGGGGTACTG). EcoRI-XbaI based cloning in the pMG1-SVT construct resulted in the pMG1-CIS plasmid.

[0053] Construction of pMG1-CIS2

[0054] A fragment of human CIS2 (aa 34-198) containing the SH2 domain and the SOCS box sequence was amplified via RT-PCR using primers MBU-O-1046 and MBU-O-1047 as forward and reverse primer respectively. The forward primer contains an EcoRI site while the reverse contains the stop codon and a NotI restriction site. RNA from HEK293 c116 cells was used as input in a one-step RT-PCR procedure (Qiagen Onestep RT-PCR kit). EcoRI-NotI based cloning in pMG1-SVT resulted in pMG1-CIS2.

[0055] Construction of pMG 1-VavS

[0056] A fragment of human Vav1 (VavS: aa 259-789) was amplified using Pfu polymerase from mRNA of the human TF1 cell line by standard RT-PCR techniques. Primers were MBU-O-737 and MBU-O-738 as forward and reverse respectively. MBU-O-737 contains an extra EcoRI allowing in frame fusion to gp130, and MBU-O-738 contains a stop codon and a XhoI recognition site. The amplified fragment was subcloned in de pCR®-Blunt vector and ligated in the pMG1 vector through an EcoRI-XhoI based exchange, resulting in pMG1-VavS.

[0057] Construction of the Reporter Plasmids

[0058] The pUT651 construct expressing β-galactosidase was obtained from Eurogentec. Generation of the pGL3-rPAP1-luci construct was described Eyckerman et al. (1999). The full-length rPAP1 promoter fragment was excised using partial digestion with KpnI and XhoI and ligated into the KpnI-XhoI digested pXP2d2 vector (gift from Prof. S. Nordeen), resulting in the leptin-responsive pXP2d2-rPAP1-luci reporter construct. The pXP2d2 vector is a derivative of pXP2 that lacks potential cryptic Activator Protein 0 sites (Grimm and Nordeen, 1999).

[0059] All constructs were verified by restriction and sequence analysis.

1Oligonucleotide tableMBU-O-737hVavS primerF5′-GCGGAATTCAAGCTGGAGGAATGTTCTCAMBU-O-738hVavSprirnerR5′-GCCTCGAGTTACACGTAGTTGGCAGGGAACCMBU-O-993mLR F3 Del1F5′-TCCTGTGCACATTCCCATGACCATGGCTGTTCAGTGACATCAmutagenesisMBU-O-994mLR F3 Del1R5′-TGATGTCACTGAACAGCCATGGTCATGGGAATGTGCACAGGAmutagenesisMBU-O-885mLR F3 Del2F5′-GATTTCACCACAACTTTGATATCCGGGGTTGGATGAGCmutagenesisMBU-O-886mLR F3 Del2R5′-GCTCATCCAACCCCGGATATCAAAGTTGTGGTGAAATCmutagenesisMBU-O-887mLR F3 Del3F5′-GAAAGCAGTTCTATTTGATATCGTGACCAGTGTAACAGmutagenesisMBU-O-888mLR F3 Del3R5′-CTGTTACACTGGTCACGATATCAAATAGAACTGCTTTCmutagenesisMBU-O-924mLR FallF5′-CACCTCCGTCAACAGAGCGGCTAGCGGTGTG CTTTTGA CTGGTGR225A/E226AmutagenesisMBU-O-925mLR FallR5′-CACCAGTCAAAAGCACACCGCTAGCCGCTCTGTTGACG GAGGTGR225A/E226AmutagenesisMBU-O-1045CIS2 primerF5′-GCAGAATTCACCCTGCGGTGCCTGGAGCCMBU-O-1046CIS2 primerR5′-GCTGCGGCCGCTTATACCTGGAATTTATATTCTTCC

[0060] Cell Lines and Transfection Procedures

[0061] Culture conditions and transient transfection procedures for PC12 and generation of the PC12LR8 cell line were as previously described (Eyckerman et al., 1999, Waelput et al., 2000).

[0062] HEK293T cells were maintained in a 10% CO2 humidified atmosphere at 37° C., and were grown using DMEM with 4500 mg/l glucose, 10% foetal bovine serum and 50 μg/ml gentamycin (all from LifeTechnologies). Typically, 4.105 cells were seeded the day before transfection in a 6-well plate and transfected overnight with approximately 2 μg plasmid DNA using a standard calcium phosphate precipitation procedure. One day after transfection, cells were resuspended with Cell Dissociation Agent (LifeTechnologies), seeded in a black well plate (Costar), and stimulated overnight with 100 ng/ml leptin, or left unstimulated.

[0063] Reporter Assays and Northern Blot

[0064] Luciferase assays, binding assays using Leptin-SEAP, and Northern blot hybridizations with SOCS3 and actin probes were described previously by Eyckerman et al. (1999). β-galactosidase activity was measured using the Galacto-Star™ chemiluminescent detection kit (Tropix) and a Topcount Chemiluminescence Counter (Packard).

[0065] Western Blot Analysis and Phosphopeptide Affinity Chromatography

[0066] Approximately 106 HEK293T cells were lysed in 150 μl 2× loading buffer. After sonication, 30 μl was loaded on a 10% polyacrylamide gel. After overnight blotting, FLAG-tagged SOCS3 was revealed using a {fraction (1/2500)} dilution of anti-FLAG antibody. Blotting efficiency was checked using PonceauS staining (Sigma). For phosphopeptide affinity chromatography, approximately 3.107 HEK293T cells transiently transfected as indicated were lysed in lysis buffer (20 mM Hepes pH 7; 1 mM MgCl2; 10 mM KCl; 0.5 mM DTT; 150 mM NaCl; 0.5% NP40; 1 mM NaVO4; 5 mM NaF; 20% glycerol; Complete™ Protease Inhibitor Cocktail [Roche]). Precipitated material was cleared by 5 min. centrifugation at 10000 g. To eliminate a-specific interactions, supernatants were brought on a precolumn containing Sepharose 4B beads, prior to phosphopeptide affinity chromatography on streptavidin-coupled agarose beads (Sigma). Peptide concentrations were determined by a colorimetric assay using alkaline hydrolysis and a ninhydrine reagent. 50 μl of streptavidin-agarose slurry was incubated with 5 nmoles of peptide for each reaction. Cleared lysate was incubated for 2 hours at 4° C. under slow stirring. After incubation, beads were washed four times with lysis buffer and resuspended in 2× loading buffer.

Example 1

SOCS3 Binds to the Conserved Y1077 Region

[0067] The observation that most human obese patients show elevated levels of leptin suggests the existence of a so-called leptin resistance (Maffei et al., 1995). SOCS3, a potential mediator of this resistance (Bjorbaek et al., 1998) is a member of a family of SH2 domain containing proteins mostly involved in negative regulation of signal transduction pathways (Hilton et al., 1998).

[0068] Through representational difference analysis, a PCR-based differential expression screening, in PC12 cells expressing the mouse leptin receptor, several leptin-induced transcripts, including SOCS3, were identified. In order to check the inhibitory role of SOCS3 on leptin signaling in the cell systems used, an expression vector, containing rat SOCS3 was generated. Transient expression of SOCS3 in PC12 LR8 cells, a PC12 clone that stably expresses the leptin receptor, together with the pGL3-rPAP1luci construct leads to marked inhibition of leptin-mediated reporter induction (FIG. 1). The rPAP1 promoter is derived from the rat Pancreatitis Associated Protein1 gene that shows strong induction in PC12 cells upon treatment with leptin plus forskolin (Waelput et al., 2000). Similar results were obtained in HEK293T cells transiently transfected with the leptin receptor, SOCS3 and the pXP2d2-rPAP1luci constructs. The pXP2d2-rPAP1luci construct showed in HEK293T cells a 4 times increased signal/background ratio and a higher reproducibility in comparison to the pGL3-based reporter construct. Taken together, these findings confirm the inhibitory activity of SOCS3 in our cell-based reporter systems.

[0069] The murine leptin receptor contains three tyrosine residues within its cytoplasmic domain (FIG. 2A). Y1138 is situated within a box3 or STAT3 recruitment motif and is critical for leptin-mediated gene induction. Previously, a critical role for Y985 and to a lesser extent also for Y1077 in the murine leptin receptor in a negative feedback signal was shown (Eyckerman et al., 1999). To assess the effect of Y to F mutations within the leptin receptor on SOCS3 expression itself, Northern blot analysis was performed using PC12 cells transiently transfected with leptin receptor mutants. 48 hours after transfection, cells were stimulated for 24 hours with leptin (100 ng/ml) or were left untreated (FIG. 2B). Previously obtained results indicate that SOCS3 transcription is rapidly induced in PC12 cells with an optimum around 30 minutes, but that weak SOCS3 expression persists until later time points (Waelput et al., 2000). Results shown in FIG. 2B imply that during this late induction phase, mutation of Y985 results in a strong up-regulation of SOCS3 transcription. This occurs only in conjunction with Y1138, a STAT3 activation site, indicating that SOCS3 expression is STAT-dependent, as has been shown before for signaling via the IL-6 and leukemia inhibitory factor receptors (Auernhammer et al., 1999, Schmitz et al., 2000). Absence of the Y1077 site does not lead to altered SOCS3 mRNA expression, but lack of both sites results in a further increased induction level above what is observed for the Y985 mutant alone. These results are in line with the previous results for metallothionein 11 mRNA regulation (Eyckerman et al., 1999). A possible explanation for the elevated SOCS3 expression level could be the loss of negative feedback via either SOCS3 itself, or alternatively via the SH2 containing phosphatase SHP-2 (Carpenter et al., 1998, Li and Friedman, 1999).

[0070] Both SOCS3 and the Cytokine Inducible SH2 containing protein (CIS), another member of the SOCS family, were shown to bind activated receptors. SOCS3 binds to the gp130 signaling component of the IL-6 complex (Nicholson et al., 2000, Schmitz et al., 2000), the erythropoietin receptor (Sasaki et al., 2000) and the insulin receptor (Emanuelli et al., 2000), while CIS binds to the erythropoietin receptor, the β common chain (Yoshimura et al., 1995) but also to the leptin receptor (see example 2). Based on its functional similarity with the gp130 chain, we tested the leptin receptor for interaction with SOCS3. Leptin receptor variants containing Y to F mutations at positions Y985, Y1077, or at both sites, were tested in a functional assay based on rPAP1-induction. Signaling via the leptin receptor variants was analyzed upon transient transfection in HEK293T cells with the pXP2d2-rPAP1luci and the FLAG-tagged pMET7-fSOCS3 expression construct. Luciferase activity data were normalized by co-transfection with pUT651 and a β-galactosidase activity assay (FIG. 3B). Expression of leptin receptor variants and SOCS3 were confirmed respectively by a binding assay using a leptin-SEAP fusion protein (FIG. 3A) and Western blot analysis using an anti-FLAG antibody (FIG. 3C). The results indicated a strong inhibitory activity of SOCS3 (80-90% inhibition) when either the wild type or the mutant Y1077F leptin receptor was expressed, and a moderate inhibition (30-50% inhibition) upon expression of a Y985F receptor variant. In case of the double Y985/1077F mutant no inhibition was observed. The interaction sites of SOCS3 with the leptin receptor were confirmed using a biochemical approach. FLAG-tagged SOCS3 was expressed upon transient transfection of pMET7-fSOCS3 in HEK293T cells, and was analyzed for binding to (phospho)-tyrosine containing peptides matching the two motifs within the leptin receptor. Lysates of approximately 3×107 transfected cells were incubated with biotinylated peptides encompassing residues Y985 or Y1077 in the leptin receptor. Western blot analysis using an anti-FLAG antibody showed clear and specific-binding of SOCS3 to the phosphorylated Y985 peptide, while non-phosphorylated peptide did not bind any SOCS3 protein. SOCS3 also binds specifically to the phosphorylated Y1077 peptide but apparently with a much lower affinity confirming its accessory role in SOCS3 mediated inhibition (FIG. 4).

[0071] Taken together, these findings suggest that both tyrosines are involved in SOCS3 recruitment to the activated leptin receptor complex although binding to the Y1077 position apparently occurs at significantly lower efficiency suggesting an accessory role for this site. This observation could explain why, at late time points post stimulation, the single Y1077 mutant does not lead to detectable differences on induction of metallothionein 11 and SOCS3 genes when compared to the wild type receptor, whereas a more pronounced induction is observed when the double Y985/1077F mutant is compared to the Y985F receptor variant (FIG. 2). In line with these findings, recruitment of SOCS3 at the single phosphorylated Y1077 motif shows a moderate inhibition of leptin signaling (FIG. 3). Perhaps this accessory role of the Y1077 motif is only functional when expression levels of SOCS3 are highly elevated, suggesting different threshold levels for leptin receptor signaling may exist. Although several groups were not able to show leptin dependent phosphorylation of the Y1077 site in the leptin receptor using anti-phosphotyrosine antibodies (Li and Friedman, 1999, Banks et al., 2000), our results indicate a functional phosphorylation-dependent role for this site in leptin signaling.

[0072] It is of note that a stretch of 10 amino acids downstream of the Y1077 motif is very conserved throughout evolution. This very pronounced conservation of the Y1077 motif also underscores its functional importance in leptin signaling.

Example 2

CIS Binds to the Highly Conserved Y985 and Y1077 Motifs in the Leptin Receptor

[0073] CIS expression is rapidly induced by leptin, but recruitment to the leptin receptor was never shown. Using a functional assay, binding of CIS to both phosphorylated Y985 and Y1077 motifs have been demonstrated. Leptin receptor mutants were used that contained the Y1138F mutation, resulting in lack of STAT (Baumann et al., 1996) and rPAP1 promoter (Eyckerman et al., 1999) activation. Y1138F receptor mutants containing additional Y to F substitutions at positions Y985, Y1077, or at both, were transiently cotransfected with the gp130-CIS construct and the pXP2d2-rPAP1-luci and pUT651 reporter vectors. Normalised luciferase data are shown in FIG. 5 and indicate comparable functional recruitment of CIS to both single Y985 and Y1077 tyrosine motifs within the leptin receptor. In line with the use of both sites, a stronger signal is obtained for the single Y1138F mutant receptor. No luciferase activity is induced in case of cells transfected with pMET7-LR-F3 or with empty vector. No difference in expression levels of the mutant receptors was observed.

[0074] Mutual comparison and cross-species relationship of the amino acid contexts of the Y985 and Y1077 residues support the functional data on CIS recruitment on both sites.

Example 3

Vav is Recruited by the Conserved Y1077 Region, Even Without Phosphorylation of the Tyrosine Residue

[0075] The functionality of the mLR F3 deletions were tested by following transfections in Hek293T cells:

[0076] a. pMET7-mLR F3+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0077] b. pMET7-mLR F3 Del1+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0078] c. pMET7-mLR F3Del2+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0079] d. pMET7-mLR F3Del3+pMG1-VavS+pXP2d2-rPAP1luci+pUT651

[0080] Transfection was performed as follows. A 300 pi precipitation mixture was prepared containing 3.05 μg DNA (0.05 μg of pUT651; 1 μg of the each other vector). 200 μl of this mixture was added to 4.105 cells for 18 hours. After one wash with PBS-A, cells were further incubated in 3 ml DMEM medium for 24 hours. Cells were then resuspended with 200 μl cell dissociation agent, and DMEM medium was added to a total volume of 2 ml. 50 μl of this cell suspension was transferred into a 96 well plate for each transfection and stimulation with leptin (final concentration 100 ng/ml) was performed in triplicate. 24 hours after stimulation, luciferase and β-galactosidase measurements were performed as described above.

[0081] As shown in FIG. 6, the results illustrate that, from the three deletion mutants, only the mLR F3 Del1 (transfection b) shows a significant induction of the rPAP1 promoter. Transfections c and d, compared to the mLR F3 (transfection a) lack induction of luciferase activity with leptin.

Example 4

CIS2 Binds to Both the Y985 and Y1077 Motifs in the Leptin Receptor

[0082] A similar functional assay in HEK293T cells as in example 2 is performed. Variant leptin receptor mutants were co-transfected with the pMG1-CIS2 construct and both the pXP2d2rPAP1 luci and pUT651 reporters. FIG. 7 shows normalized luciferase data. No difference in expression levels of the mutant receptors was observed. Data shown is the mean of triplicate measurements. CIS2 binds predominantly to the Y1077 site while binding to the Y985 site is less pronounced. No significant luciferase induction is observed when the LR-F3 mutant was transfected.

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Funtional fragment of the lectine receptor

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