The invention relates to a method for sensing a magnetic stray field generated by a magnetizable object when magnetized and for generating an electrical object signal which depends on the sensed magnetic stray field. The invention further relates to a magnetic sensor comprising a magneto-resistive element for sensing the magnetic stray field generated by the magnetizable object when magnetized and for generating the electrical object signal, and to a biochip comprising such a sensor for use in e.g. molecular diagnostics biological sample analysis or chemical sample analysis.
The introduction of micro-arrays or biochips is revolutionizing the analysis of samples for DNA (desoxyribonucleic acid), RNA (ribonucleic acid), nucleic acids, proteins, cells and cell fragments, tissue elements, etcetera. Applications are e.g. human genotyping (e.g. in hospitals or by individual doctors or nurses), medical screening, biological and pharmacological research, detection of drugs in saliva. The aim of a biochip is to detect and quantify the presence of a biological molecule in a sample, usually a solution.
Biochips, also called biosensors, biosensor chips, biological microchips, gene-chips or DNA chips, consist in their simplest form of a substrate on which a large number of different probe molecules are attached, on well defined regions on the biochip, to which molecules or molecule fragments that are to be analyzed can bind if they are matched.
The term “substrate” may include any underlying material or materials that may be used, or upon which a device, a circuit or an epitaxial layer may be formed. The term “substrate” may also include a semiconductor substrate such as e.g. a doped silicon, a gallium arsenide (GaAs), a gallium arsenide phosphide (GaAsP), an indium phosphide (InP), a germanium (Ge), or a silicon germanium (SiGe) substrate. The “substrate” may include, for example, an insulating layer such as a SiO2 or an Si3N4 layer in addition to a semiconductor substrate portion. Thus the term “substrate” also includes glass, plastic, ceramic, silicon-on-glass, silicon-on-sapphire substrates. The term “substrate” is thus used to define generally the elements for layers that underlie a layer or portions of interest. Also the “substrate” may be any other base on which a layer is formed, for example a glass or metal layer.
For example, a fragment of a DNA molecule binds to one unique complementary DNA (c-DNA) molecular fragment. The occurrence of a binding reaction can be detected, e.g. by using fluorescent markers that are coupled to the molecules to be analyzed. As an alternative to fluorescent markers magnetizable objects can be used as magnetic markers that are coupled to the molecules to be analyzed. It is the latter type of markers which the present invention is dealing with. In a biochip said magnetizable objects are usually implemented by so called superparamagnetic beads. This provides the ability to analyze small amounts of a large number of different molecules or molecular fragments in parallel, in a short time. One biochip can hold assays for 10-1000 or more different molecular fragments. It is expected that the usefulness of information that can become available from the use of biochips will increase rapidly during the coming decade, as a result of projects such as the Human Genome Project, and follow-up studies on the functions of genes and proteins. A general explanation of the functioning of the biochip has already been described in the international patent application of the present applicant published as WO 03/054523 A2.
A biochip consisting of an array of sensors (e.g. 100) based on the detection of superparamagnetic beads may be used to simultaneously measure the concentration of a large number of different biological molecules (e.g. protein, DNA) in a sample fluid (e.g. a solution like blood or saliva). The sample fluid comprises a target molecule species or an antigen. Any biological molecule that can have a magnetic label (marker) can be of potential use. The measurement may be achieved by attaching a superparamagnetic bead to the target, magnetizing this bead with an applied magnetic field, and using (for instance) a Giant Magneto Resistance (GMR) sensor to detect the stray field of the magnetized beads.
In the current patent application focus is for a biochip based on excitation of superparamagnetic nanoparticles. However also the application in other magneto resistive sensors like Anisotropic Magneto Resistor (AMR) and Tunnel Magneto Resistor (TMR) is part of the invention. The magnetic field generator may comprise a current flowing in a wire which generates a magnetic field, thereby magnetizing a superparamagnetic bead. The stray field from the superparamagnetic bead introduces an in-plane magnetization component in the GMR, which results in a resistance change.
For further explanation of the background of the invention reference is made to
The functioning of the magnetic sensor MS or more generally of the biochip BCP is as follows. Each probe element PE is provided with binding sites BS of a certain type. Target sample TR is presented to or passed over the probe element PE, and if the binding sites BS and the target sample TR match, they bind to each other. The superparamagnetic beads SPB are directly or indirectly coupled to the target sample TR. The superparamagnetic beads SPB allow to read out the information gathered by the biochip BCP. Superparamagnetic particles are ferromagnetic particles of which at zero applied magnetic field the time-averaged magnetization is zero due to thermally induced magnetic moment reversals that are frequent on the time scale of the magnetization measurement. The average reversal frequency is given by
where KV (with K the magnetic anisotropy energy density and V the particle volume) is the energy barrier that has to be overcome, and ν0 is the reversal attempt frequency (typical value: 109 s−1), k is the Boltzmann constant, and T is the absolute temperature (in Kelvin).
The magnetic field H magnetizes the superparamagnetic beads SPB which as a response generate a stray field SF which can be detected by the GMR. Although not necessary the GMR should preferably be positioned in a way that the parts of the magnetic field H which passes through the GMR is perpendicular to the sensitive direction of the layer of the GMR. A total external field for which the GMR is sensitive is indicated by Hext in
The stray field SF has a horizontal component (the sensitive direction of the layer of the GMR) and will thus generate a difference in the resistance value of the GMR. By this an electrical output signal (e.g. generated by a current change through the GMR when biased by a DC voltage, not shown in
Not only the amount of superparamagnetic beads but also the total gain of the sensor determines the amplitude of the output voltage of the sensor. Therefore the total gain should be known e.g. by measuring the total gain before the actual bio-measurement. Preferably also this total gain is calibrated to be equal to a desired value. Furthermore it is desirable to perform cross-talk isolation techniques for measuring the effect of the magnetic cross-talk caused by the magnetic field which results directly (thus not via the paramagnetic beads) from the magnetic field generator. The total gain of the sensor is dependent on various elements such as an amplifier (or buffer), and the steepness of the GMR. The steepness is the derivative of the resistance of the magneto-resistive element as a function of the magnetic field through the magneto-resistive element in a magnetically sensitive direction of the magneto-resistive element. Even if cross-talk cancellation is performed any change in the value of the gain of the amplifier or said steepness of the GMR during the bio-measurements can adversely affect the accuracy of the measurement. In this respect the most critical component in the sensor is the GMR. The steepness of the GMR, and therefore the total gain of the sensor, is dependent on parameters which are difficult to control for instance applied magnetic fields, production tolerances, aging effects, and temperature. There is thus a high need to stabilize the sensitivity of the GMR.
It is therefore an object of the invention to stabilize the sensitivity of a GMR present in a magnetic sensor.
In order to achieve this object the invention provides a magnetic sensor comprising a magneto-resistive element for sensing a magnetic stray field generated by a magnetizable object when magnetized and for generating an electrical object signal which depends on the sensed magnetic stray field, the sensor comprising a magnetic field generator for generating a magnetic field having a first frequency for magnetizing the magnetizable object, a current source for at least generating an AC-current having a second frequency through the magneto-resistive element, and electronic means for generating an electrical output signal derived from the electrical object signal, the electronic means comprising stabilization means for stabilizing the amplitude of the electrical output signal, the stabilization means deriving its information which is needed for said stabilization from the amplitude of a signal component, which is present in the object signal during operation, which is linearly dependent on the steepness of the magneto-resistive element.
The invention is based on the insight that by applying the AC-current with the second frequency, the sensed object signal will not only comprise a signal component which depends on the sensed magnetic stray field but will also comprise one or more signal components of which the amplitude is linearly dependent on the sensitivity of the GMR. By the electronic means such a signal component can be isolated from the remainder of the signal in the object signal and gives a measure for the sensitivity of the GMR. This makes it possible to stabilize the total gain.
The AC-current through the GMR causes an internal magnetic field in the GMR. Due to asymmetric current distribution in the GMR stack, the current through the GMR will introduce an in-plane magnetic field component in the sensitive layer of the sensor. This effect can be interpreted as internal magnetic cross talk and will give rise to a voltage component which is linear to the squared amplitude of the AC-current and which is linear to the sensitivity of the GMR. Linear to the squared amplitude of the AC-current also means linear to the second harmonic component (thus having a frequency which is twice as high as the second frequency) in relation to the AC-current. Thus stabilizing the sensitivity of the GMR can be performed by detecting the second harmonic component (in relation to the second frequency) in the object signal and by performing some action to cancel the influence of the previously mentioned difficult to control parameters. Other harmonic components, e.g. the fourth harmonic component, can be used in stead of the second harmonic. However since generally the second harmonic is predominately present it is preferred to use the second harmonic in view of reaching the highest possible signal-to-noise ratio in the sensor and thus in reaching the highest accuracy for the bio-sensor measurements.
The invention may further be characterized in that the stabilization means comprises means for generating a further AC-current, having a third frequency, through the magneto-resistive element, and in that the signal component is a harmonic component in the current through the magneto-resistive element having a frequency which is equal to the third frequency, or to the difference of the third and the second frequency, or to the sum of the third and the second frequency. The further AC-current is preferably generated by the presence of a further magnetic field generator for generating the further magnetic field. Sometimes the earlier mentioned in-plane magnetic field component is very weak and as a consequence the second harmonic component is also very weak. This makes detection of the second harmonic component very difficult. It may result in a too noisy signal thereby negatively influence the accuracy of the bio-measurement. By the addition of the further magnetic field, signal components in the object signal are generated having frequencies equal to the third frequency, or to the difference of the third and the second frequency, or to the sum of the third and the second frequency. All these signal components are linearly dependent to the sensitivity of the GMR and can be isolated, individually or combined, and used to stabilize the total gain of the sensor in a corresponding manner as previously explained with reference to the detection of the second harmonic component.
One way of stabilizing the sensitivity of the GMR is by adding steepness adaptation means for adapting the steepness of the magneto-resistive element. This may for instance be performed by changing the value of the DC-current through the magneto-resistive element. Alternatively the adaptation of the steepness is performed by changing a DC value component in the further magnetic field e.g. by changing a DC component in the further DC-current. The gain adaptation means may comprise a synchronous detector for synchronously detecting the signal component, and means for comparing the detected signal component with a target value for the steepness of the magneto-resistive element and for delivering an error signal as a result of the comparison. The error signal changes the DC value of the current through the GMR or in the further magnetic field (or further current). By doing so a negative feedback loop is created in which the error signal will be controlled to be equal (or close) to zero. As a consequence the sensitivity of the GMR will be made equal to the target value (and is thus stabilized).
Another way of stabilizing the sensitivity of the GMR is by adding gain adaptation means for adapting a gain value in the electronic transfer from the electrical object signal to the electrical output signal. Since now there is no negative feedback loop in which the GMR is incorporated, it is easier to design than the previous mentioned way because undesired oscillations or overshoot can not occur. The gain adaptation means may comprise a synchronous detector for synchronously detecting the signal component, and means for comparing the detected signal component with a target value for the steepness of the magneto-resistive element and for delivering a control signal as a result of the comparison. This control signal is used for the changing of the gain value.
In another embodiment, superparamagnetic beads are applied to the reference-sensor during production. This can be achieved by either e.g. spotting (like ink-jet spotting) a well defined surface density concentration of beads or a well defined volume density of beads.
These beads may be utilized for calibration of the transfer function. If the sensor is shielded for free moving beads in the sample fluid, which is the case if the bead coverage is large enough, the transfer function may also be stabilized during the actual bio-measurement.
In another embodiment the sensitivity of the GMR is controlled by varying the strength of the magnetic field produced by an external magnet or by varying the position of the external magnet by translation or rotation.
The electronic means may comprises a further synchronous detector for synchronously detecting the object signal, or a gain adapted version of the object signal, on the first frequency and/or on the difference of the first and the second frequency, and/or on the sum of the first and second frequency, and a frequency low pass filter for filtering the resulted signal from the further detector and for delivering the electrical output signal as a result of the filtering. By this the electrical output signal is a pure DC-signal which is a measure for the amount of targets TR and thus for the concentration of biological molecules in the sample fluid.
As an alternative the gain of the reference sensor is obtained by measuring the response to at least one field generating wire in the vicinity of the reference sensor. It is important to be not sensitive to the beads on the reference sensor surface or into the solution as the number of beads may fluctuate during the bio-measurement and disturb the stabilization mechanism. Therefore preferably magnetic beads are avoided near the reference sensor surface by omitting binding regions on the surface, by proper shielding, by pulling beads away from the sensor or by measuring at a frequency above the response bandwidth of the super paramagnetic beads. As an alternative beads are attracted in a well defined way to the sensor surface. The advantage of this method is that it may shield the reference sensor from free moving beads above the sensor, which avoid said beads to influence on the stabilization mechanism of the GMR. The attracting forces may be generated by a magnetic field gradient introduced by magnetic field generating wires near the sensor.
If desired, after attracting beads to the surface, beads near the surface are removed by (magnetically) washing it away. As an alternative beads are applied to the reference sensor during production. This can be achieved by either e.g. spotting (like ink-jet spotting) a well defined surface density concentration of beads or a well defined volume density of beads. These beads may be used for gain stabilizing during the bio-measurement. Preferably said beads shield the magnetic field from free moving beads in the sample fluid. As an alternative the response of paramagnetic beads are “switched off”. As a consequence only magnetic cross-talk is measured which can be used to stabilize the total gain. This can be done by applying a vertical magnetic field, e.g. having frequency ω3 above the magnetic response frequency of the beads, perpendicular to the sensitive direction of the GMR. This field saturizes the beads, as a consequence only the magnetic cross-talk from the current wires are measured. This signal is indicative for the gain, and can thus be used to keep the gain constant. It can also be done by applying beads with hysteresis (with the aid of an additional magnetic field). The beads are adjusted to their linear region, which is necessary for detection. If then the additional field is taken away, the beads will no longer respond to the magnetic field, and thus only cross-talk is then measured.
The invention also provides a method for stabilizing the steepness of a magneto-resistive element in a magnetic sensor for sensing a magnetic stray field generated by a magnetizable object when magnetized and for generating an electrical object signal which depends on the sensed magnetic stray field comprising the steps of:
generating a magnetic field, having a first frequency, for magnetizing the magnetizable object,
generating an AC-current, having a second frequency, through the magneto-resistive element,
generating an electrical output signal from the electrical object signal, and
stabilizing the amplitude of the electrical output signal by detecting a signal component which is present in the object signal and which is linearly dependent on the steepness of the magneto-resistive element.
The invention further provides a biochip comprising an inventive magnetic sensor. The biochip may comprise a multiple of magnetic sensors wherein at least one inventive sensor is used as a reference sensor and wherein the adaptation of the steepness of the magneto-resistive elements or the gain adaptation means for adapting the gain value in the electronic transfers from the electrical object signals to the electrical output signals in the other sensors is performed by using information derived from the reference sensor.
Preferably the sensitivity of the GMR is measured in the same frequency range as the beads excitation is performed. By doing so the highest signal-to-noise ratio can be reached. Optionally the sensor may comprise a so called Wheatstone bridges or half-Wheatstone bridges in which one or more GMRs are incorporated.
The invention will be further elucidated with reference to the accompanying drawings, in which:
The drawings are only schematic and non-limiting. In the drawings the size of some of the elements may be exaggerated and not drawn on scale and serve only for illustrative purposes. The description to the Figures only serve to explain the principles of the invention and may not be construed as limiting the invention to this description and/or the Figures.
is not constant but depends on Hext. It is also depends on any internally generated magnetic field caused by asymmetric current distribution in the GMR stack.
In the sensor MS as shown in
In GMR technology, structures have been developed in which two very thin magnetic films are brought very close together. A first magnetic film is pinned, what means that its magnetic orientation is fixed, usually by holding it in close proximity to an exchange bias layer, a layer of antiferromagnetic material that fixes the first magnetic film's magnetic orientation. A second magnetic layer or free layer, has a free, variable magnetic orientation. Changes in the magnetic field, in the present case originating from changes in the magnetization of the superparamagnetic particles SPB, cause a rotation of the free magnetic layer's magnetic orientation, which in turn, increases or decreases the resistance of the GMR structure. Low resistance generally occurs when the sensor and pinned layers are magnetically oriented in the same direction. Higher resistance occurs when the magnetic orientations of the sensor and pinned layers (films) oppose each other.
TMR can be observed in systems made of two ferromagnetic electrode layers separated by an isolating (tunnel) barrier. This barrier must be very thin, i.e., of the order of 1 nm. Only then, the electrons can tunnel through this barrier. This is a quantum-mechanical transport process. The magnetic alignment of one layer can be changed without affecting the other by making use of an exchange bias layer. Changes in the magnetic field, in the present case originating from changes in the magnetization of the superparamagnetic particles SPB, cause a rotation of the sensor film's magnetic orientation, which in turn, increases or decreases resistance of the TMR structure.
The AMR of ferromagnetic materials is the dependence of the resistance on the angle the current makes with the magnetization direction. This phenomenon is due to an asymmetry in the electron scattering cross section of ferromagnet materials.
The signal UGMR can be expressed by:
u
GMR
=i
s(RGMR+sGMR·(Hext+α·is))=is(RGMR+sGMR·Hext)+is2·sGMR·α.
By substituting is=IDC+I2 sin ω2t:
u
GMR=(IDC+I2 sin ω2t)·(RGMR+sGMR·Hext)+(IDC2+2IDCI2 sin ω2t+I22 sin ω2t)·sGMR·α
The magnetic field from the beads equals: Hext=H1 sin ω1t
The following expression can then be derived for the signal UGMR:
The last term in the latter expression for the signal UGMR equals
and is thus a second harmonic component in relation to the second frequency ω2. Further the sensitivity sGMR of the GMR is linearly present in this last term. Thus with the aid of this last term the sensitivity can be stabilized. this can be performed by synchronously demodulating the object signal UOB, which is an amplified version of the signal UGMR.
The result of this demodulation is a DC component which is proportional to sGMR and independent from H1.
The applied magnetic field Hint (see
Note that the harmonic distortion components due to the non-linear GMR characteristic are neglectable because of the small AC amplitude of the magnetic field induced by the sense current is.
in which G is the value of the DC-signal delivered by the further low pass filter LPF2, and is thus related to the sensitivity sGMR of the GMR, and δ determines the maximum possible gain of the gain adapter GADPT. Thus, like in the circuit of
As an alternative to the location of the wire WR3 in
The time constant τneel is the so-called Neel relaxation time (see for Neel relaxation: “Journal of Magnetism and Magnetic Materials 194 (1999) page 62 by R. Kötiz et al.)
Generally speaking: by increasing ω3, the response from the super paramagnetic beads SPB will decrease. By sweeping ω3 over a broad frequency range, information about the gain and the sensitivity of the magnetic sensor and thus about the number of beads SPB is retrieved.
As an alternative a wire WR3 adjacent (or below the GMR) generates a DC magnetic field in order to control the sensitivity sGMR. This approach will probably generate a non-neglectable field gradient, which may actuate beads SPB. Generating the DC field only during gain stabilization and during the bio-measurement (measuring the response from the beads) can minimize this effect.
As yet another alternative the sensitivity sGMR is controlled by varying the strength or the position (translation, rotation) of an external magnet (permanent or electromagnet) with respect to the biochip.
It is also possible that the external magnet also generates a fluctuating magnetic field in the GMR in order to perform the measurement of the sensitivity sGMR.
It should be noted that the above-mentioned embodiments illustrate rather than limit the invention, and those skilled in the art will be capable of designing alternative embodiments without departing from the scope of the invention as defined by the appended claims. In the claims, any reference signs placed in parentheses shall not be construed as limiting the claims. The words “comprising” and “comprises”, and the like, do not exclude the presence of elements other than those listed in any claim or in the application as a whole. The singular reference of an element does not exclude the plural reference of such elements. The mere fact that certain measures are recited in mutually different dependent claims does not indicate that a combination of these measures can not be used. Any terms like top, bottom, over, under and the like in the description and the claims are used for descriptive purposes and not necessarily for describing relative positions. It is to be understood that the terms so used are interchangeable under appropriate circumstances and that the embodiments of the invention described herein are capable of operation in other orientations than described or illustrated by the Figures.
Number | Date | Country | Kind |
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04106194.6 | Nov 2004 | EP | regional |
Filing Document | Filing Date | Country | Kind | 371c Date |
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PCT/IB2005/053935 | 11/28/2005 | WO | 00 | 5/23/2007 |