Patent Application
20220229070
The instant application contains a Sequence Listing which has been submitted in ASCII format via EFS-Web and is hereby incorporated by reference in its entirety. Said ASCII copy, created on Aug. 12, 2013, is named 201371-078970_SequenceListing.txt and is 22,775 bytes in size.
The present invention relates to a method for diagnosing cancer and a diagnosis kit using measurement of NK cell activity.
It is known that natural killer (NK) cells take part in innate immunity to remove pathogens and cancer cells, and secrete interferon-gamma (IFN-γ), tumor necrosis factor-alpha (TNF-α), macrophage inflammatory protein-1β(MIP-1β) and other molecules to mediate the adaptive immunity. When NK cells encounter other cells, the NK cells have a mechanism in which, when MHC Class 1 is not present as in cancer cells, or a shape of MHC Class is abnormal as in cells infected with viruses, their major histocompatibility complexes (MHCs) send signals into the NK cells to attack these abnormal cells through their molecular actions. However, since NK cells have been reported to have defects in functions and differentiation capacities in various kinds of cancers, NK cell activity is closely associated with the survival of cancer cells. Therefore, research is being widely conducted to increase the number, or activity of NK cells for cancer immunotherapy.
Meanwhile, methods of diagnosing cancer have mainly included finding the presence of cancer from graphic images obtained using computed tomography (CT), magnetic resonance imaging (MRI) or X rays. However, since these tests are generally conducted only when a patient has a strong need to undergo the tests due to pain or inconvenience, and are performed only in certain tissues, the presence of cancer may be overlooked. A method of determining the risk of cancer using a blood test has been developed, but its use as a method of diagnosing cancer is limited. This is because a patient may appear to be positive for cancer when an etiological factor is present in the corresponding organ rather than cancer, since the method is conducted using blood tumor markers, e.g. for prostate cancer, colon cancer, ovarian cancer, pancreatic cancer or liver cancer. There have also been attempts to diagnose cancer using antibodies, but such attempts are limited to certain types of cancer.
Accordingly, there continues to be a need for new methods for diagnosing cancers of various types.
It is therefore an object of the invention to provide a method that can be used in the diagnosis and evaluation of cancer, as well as kits and reagents useful in such a method.
As an aspect of the invention, there is provided a method of measuring NK cell activity, the method comprising stimulating NK cells in a blood sample thereby artificially activating the NK cells to generate NK cell-secreting cytokines and measuring an amount of the NK cell-secreting cytokines in the blood sample.
In certain non-limiting embodiments, the blood sample may be a sample of whole blood, peripheral blood mononuclear cells (PBMCs) or NK cells.
In further embodiments, the stimulation of the NK cells may be performed by incubating the blood sample with at least one stimulating cytokine including interleukin 2, interleukin 12, interleukin 15 and interleukin 18, or combinations thereof, or by incubating the blood sample with lipopolysaccharides (LPSs) or polyinosinic:polycytidylic acid (poly I:C).
The NK cell-secreting cytokines may, in certain embodiments, comprise interferon-gamma (IFN-γ), tumor necrosis factor-alpha (TNF-α) or macrophage inflammatory protein-1β(MIP-1β).
In further non-limiting embodiments of the method, macrophage inflammatory protein-1β (MIP-1β) can be used as control group for comparing activation of NK cells with that of a normal person.
In addition, the method may in certain embodiments be carried out using at least one stimulating cytokine fused to a stabilizing peptide. For example, yet without wishing to be limiting, the stabilizing peptide may be a C-terminal acidic tail domain peptide of a synuclein family. In such embodiments, the stabilizing peptide may comprise amino acid residues 103-115 (SEQ ID NO: 22), amino acid residues 114-126 (SEQ ID NO: 23), amino acid residues 119-140 (SEQ ID NO: 24) or amino acid residues 130-140 (SEQ ID NO: 25) of the C-terminal acidic tail domain of α-synuclein, amino acid residues 85-134 of the C-terminal acidic tail domain of β-synuclein (SEQ ID NO: 27), amino acid residues 96-127 of the C-terminal acidic tail domain of γ-synuclein (SEQ ID NO: 29), or amino acid residues 96-127 of the C-terminal acidic tail domain of synoretin (SEQ ID NO: 29).
In further embodiments, the step of stimulating NK cells in a blood sample thereby artificially activating the NK cells to generate NK cell-secreting cytokines is performed in a medium containing a carrier protein, for example a serum albumin protein.
The method as described is particularly useful for detecting the incidence or relapse of cancer. In such embodiments, a decrease in the amount of the NK cell-secreting cytokines in a subject, as compared to levels in normal individuals, is an indicator of cancer incidence or relapse.
As a further aspect of the invention there is provided a kit for measuring NK cell activity. The kit will comprise an agent for stimulating the NK cells in a blood sample thereby artificially activating the NK cells to generate NK cell-secreting cytokines. In addition, the kit may be useful for carrying out the method as described above, including for detecting the incidence or relapse of cancer.
In further non-limiting embodiments of the described kit, the NK cell-secreting cytokine may be interferon-gamma (IFN-γ) or tumor necrosis factor-alpha (TNF-α).
In a further embodiment, the agent for stimulating the NK cells in the blood sample and artificially activating the NK cells to generate the NK cell-secreting cytokines may comprise at least one stimulating cytokine, LPS or poly I:C, the at least one stimulating cytokine including one or more of interleukin 2, interleukin 12, interleukin 15 and interleukin 18.
The described kit may also comprise, in certain embodiments, one or more of the following: anti-INF-γ antibody, an anti-TNF-α antibody, and an anti-MIP-1β antibody. Without wishing to be limiting in any way, the kit may also further comprise instructions for comparing the amount of the NK cell-secreting cytokines in a subject to levels in normal individuals, wherein a decrease in the level of the NK cell-secreting cytokines in the subject is an indicator of cancer incidence or relapse.
As a further aspect of the invention, there is provided a fusion protein comprising a cytokine bound to a C-terminal acidic tail domain peptide of a synuclein family, the cytokine being either interleukin 2, interleukin 12, interleukin 15 or interleukin 18.
In certain non-limiting embodiments of the described fusion protein, the C-terminal acidic tail domain peptide of the synuclein family may comprise amino acid residues 103-115 (SEQ ID NO: 22), amino acid residues 114-126 (SEQ ID NO: 23), amino acid residues 119-140 (SEQ ID NO: 24) or amino acid residues 130-140 (SEQ ID NO: 25) of the C-terminal acidic tail domain of α-synuclein, amino acid residues 85-134 of the C-terminal acidic tail domain of β-synuclein (SEQ ID NO: 27), amino acid residues 96-127 of the C-terminal acidic tail domain of γ-synuclein (SEQ ID NO: 29), or amino acid residues 96-127 of the C-terminal acidic tail domain of synoretin (SEQ ID NO: 29).
Compositions comprising the above-described fusion protein are also provided.
In addition, cancer diagnosis kits comprising either the above-described fusion proteins or the above-described compositions are also provided herein.
The cancer diagnosis kit, as described above, may in certain non-limiting embodiments also include at least one antibody among the following: an anti-INF-γ antibody, an anti-TNF-α antibody and an anti-MIP-1β antibody.
There is also provided herein a polypeptide comprising an amino acid sequence having at least 80% identity to an amino acid sequence of SEQ ID NO: 2, SEQ ID NO: 4, SEQ ID NO: 6, SEQ ID NO: 8, or SEQ ID NO: 10. Without wishing to be limiting, the polypeptide may have a higher percent identity, including 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100% identity to the sequences of SEQ ID NO: 2, SEQ ID NO: 4, SEQ ID NO: 6, SEQ ID NO: 8, and SEQ ID NO: 10.
Oligonucleotides encoding the above-described fusion proteins and polypeptides are also provided. For instance, an oligonucleotide is provided comprising a nucleic acid sequence with at least 80% identity to a nucleic acid sequence of SEQ ID NO: 1, SEQ ID NO: 3, SEQ ID NO: 5, SEQ ID NO: 7, or SEQ ID NO: 9, or the complement thereof. Such oligonucleotides may, without limitation, have a higher percent identity, including 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100% identity to the sequences of SEQ ID NO: 1, SEQ ID NO: 3, SEQ ID NO: 5, SEQ ID NO: 7, or SEQ ID NO: 9, or the complementary sequences thereof.
Vectors comprising the oligonucleotides described above are also provided, as are host cells comprising such vectors or oligonucleotides.
The above and other objects, features and advantages of the present invention will become more apparent to those of ordinary skill in the art by describing in detail exemplary embodiments thereof with reference to the drawings, in which:
The present invention is directed to a method, kit, and reagents for diagnosing cancer incidence using the interrelationship of cancer and NK cells.
For this purpose, there is provided a method of measuring NK cell activity comprising stimulating NK cells in a blood sample thereby artificially activating the NK cells to generate NK cell-secreting cytokines, and measuring an amount of the NK cell-secreting cytokines in the blood sample.
The present inventors have found that, based on the an observation that NK cell activity is reduced in cancer patients, the incidence of cancer may be primarily screened by measuring NK cell activity. The method described herein is capable of determining whether or not the NK cells function normally by giving an artificial stimulus to the NK cells, and measuring an activation level of the NK cells by detecting changes in the amount of NK cell-secreting cytokines present in a blood sample, which differs from other methods which simply measure the number of the NK cells or an amount of cytokines originally present in the blood sample. For example, in a conventional method of measuring an activation level of the NK cells, a 51Cr release assay has been used as a method of measuring the target-specific cytotoxicity. However, when the NK cell activity is measured in this manner, a radioactive isotope should be used, and measurement and analysis are difficult, complicated and costly. Therefore, the assay is unsuitable for use in primary cancer screening/testing methods which can simply diagnose the incidence of cancer. On the other hand, according to the present invention, since NK cell activity may be measured by stimulating the NK cells to generate NK cell-secreting cytokines and quantifying the generated NK cell-secreting cytokines, a subject in which NK cell activity is reduced may be advantageously screened as a subject suffering from cancer or at risk of suffering from cancer.
According to the present invention, the blood sample may include, but is not limited to, whole blood, peripheral blood mononuclear cells (PBMCs) and NK cells, which are taken from the subject. The PBMCs or NK cells may be used intact instead of the whole blood, but the use of the whole blood may be advantageous in certain embodiments due to simpler methodology and reduced costs.
Meanwhile, in the present invention, the term “subject” refers to a mammal that is suspected of suffering from cancer or having a relapse of cancer, or that wishes to determine the incidence or relapse of cancer.
The NK cells present in the blood sample are generally present in an inactivated state. According to the present invention, at least one cytokine, lipopolysaccharide (LPS) or polyinosinic:polycytidylic acid (poly I:C) may be used as an agent, also referred to herein as an agonist or activator, that serves to stimulate such NK cells in the blood sample and artificially activate the NK cells to generate NK cell-secreting cytokines. Here, the cytokine used for activating NK cells may be interleukin 2, interleukin 12, interleukin 15 and interleukin 18, or combinations thereof. The interleukin 2, the interleukin 12, the interleukin 15, the interleukin 18, the LPS or the poly I:C are widely known in the art to be stimulated to generate the NK cell-secreting cytokines. Therefore, according to one exemplary embodiment of the present invention, the stimulation of the NK cells may be performed by incubating the blood sample with the at least one cytokine, including interleukin 2, interleukin 12, interleukin 15 and/or interleukin 18, or by incubating the blood sample with LPS or poly I:C.
In one non-limiting embodiment, the stimulation of the NK cells may be performed by incubating the blood sample with Interleukin 2. Interleukin 2 is one of the cytokines secreted by the T cells, and is known to be associated with activation of the NK cells by T cells in an in vivo adaptive immune response. Also, the interleukin 2 is a cytokine that is generally widely used to activate the NK cells in vitro. Therefore, the stimulation of the NK cells may be performed by incubating the blood sample with the interleukin 2.
In another non-limiting embodiment, the stimulation of the NK cells may be performed by incubating the blood sample with Interleukin 2 and Interleukin 12. In case of cancer patients in early stage, the activity of T cells may be high even though the activity of NK cells is low. In contrast, in case of cancer patients in late stage, the activity of T cells as well as NK cells may be low. Interleukin 12 takes part in activating T cells as well as NK cells. Thus, if interleukin 12 with interleukin 2 is treated, cytokines secreted due to stimulation of T cells are added to the cytokine secreted from NK cells. Therefore, it is possible to evaluate total level of immunity as well as anticancer immunity of NK cells, and use this level as a marker representing degree of process of cancer or prognosis of cancer treatment. The interleukin 15 and the interleukin 18 are cytokines secreted by activated dendritic cells and macrophages, and induce activation and growth of the NK cells during an in vitro innate immune response. In particular, when the interleukin 12 is combined with the interleukin 15 or the interleukin 18, a relatively small amount of the interleukin 12 may be used to stimulate the secretion of the NK cell-secreting cytokines in the NK cells. Therefore, the stimulation of the NK cells may be effectively performed by incubating the blood sample with the interleukin 12 and the interleukin 15, or with the interleukin 12 and the interleukin 18.
According to the present invention, a numerical value of the NK cell-secreting cytokines is used as a measure to evaluate NK cell activity. In the present invention, “NK cell-secreting cytokines” refers to cytokines secreted from NK cells, in particular cytokines from activated NK cells by artificial stimulation. In one embodiment, the NK cell-secreting cytokines are at least one cytokine selected from the group of interferon-gamma (IFN-γ), tumor necrosis factor-alpha (TNF-α) and macrophage inflammatory protein-1β(MIP-1β). The interferon-γ is secreted by NK cells, dendritic cells, Tc cells, Th1 cells, and the like, and is known to be a cytokine that takes an important role in innate immunity and adaptive immunity for the control of cancer. Also, tumor necrosis factor-alpha (TNF-α) kills cancer cells and further take part in killing external intruder such as bacteria, inducing activation of T cells, and playing a role as a supplementary factor for producing antibody from B cells. Therefore, for example, when the numerical value of the interferon-γ or tumor necrosis factor-alpha is smaller than that of the interferon-γ or tumor necrosis factor-alpha from a normal person, this indicates that the NK cell activity for the control of cancer is problematic. Therefore, it is possible to determine NK cell activity by comparing an amount of the interferon-γ or tumor necrosis factor-alpha secreted from the artificially activated NK cells with an amount of the interferon-γ or tumor necrosis factor-alpha from the normal person.
Meanwhile, macrophage inflammatory protein-1β(MIP-1β) can be used as control group for comparing activation of NK cells. As shown in the following examples, the numerical value of macrophage inflammatory protein-1β(MIP-1β) is similarly high in both normal persons and cancer patients. Thus, macrophage inflammatory protein-1β(MIP-1β) can be used for analyzing the activity of NK cells in normal persons and cancer patients, or can be used as an control group for analysis using a cancer diagnosis kit.
Quantification of the NK cell-secreting cytokines may be performed by any methods known in the art, but the present invention is not limited thereto. For example, the quantification of the interferon-γ may be performed using an interferon-γ enzyme-linked immunosorbent assay (Interferon-γ ELISA).
Meanwhile, at least one cytokine including interleukin 2, interleukin 12, interleukin 15 or interleukin 18, which is used as an agent that serves to stimulate the NK cells in the blood sample and artificially activate the NK cells to generate NK cell-secreting cytokines, may be in the form of a fusion protein with a stabilizing peptide.
The interleukin 2, the interleukin 12, the interleukin 15 or the interleukin 18 in the form of a fusion protein with a stabilizing peptide may provide similar biological activity and high storage stability, compared to those of wild-type interleukin 2, interleukin 12, interleukin 15 or interleukin 18. For example, when the cytokine is bound to such a stabilizing peptide, the cytokine has an innate activity while maintaining stability despite changes in environment, such as freeze-drying.
The stabilizing peptide may be bound to the N- or C-terminus of the interleukin 2, interleukin 12, interleukin 15 or interleukin 18, and preparation of such a fusion protein may be performed using known methods of preparing fusion proteins.
According to one exemplary embodiment, a C-terminal acidic tail (acidic tail amino acid sequence of alpha-synuclein, ATS) domain peptide of a synuclein family may be used as the stabilizing peptide that can be bound to the interleukin 2, interleukin 12, interleukin 15 or interleukin 18, but the present invention is not limited thereto. Korean Registered Patent No. 10-0506766 discloses that an ATS peptide endows a fusion partner protein with a resistance against environmental stresses.
According to one exemplary embodiment, the stabilizing peptide that may be used herein includes a stabilizing peptide selected from amino acid residues 103-115, amino acid residues 114-126, amino acid residues 119-140 and amino acid residues 130-140 of the C-terminal acidic tail domain of α-synuclein, amino acid residues 85-134 of the C-terminal acidic tail domain of β-synuclein, amino acid residues 96-127 of the C-terminal acidic tail domain of γ-synuclein, and amino acid residues 96-127 of the C-terminal acidic tail domain of synoretin. In the present invention, an amino acid sequence of an ATS peptide, an ATS peptide and a method of preparing a fusion protein including the same may be performed using a method disclosed in Korean Registered Patent No. 10-0506766. Referring to the following Examples, it is shown that the interleukin 2, interleukin 12, interleukin 15 or interleukin 18 fused with the ATS peptide is highly stable, and expresses a similar activity to a wild-type version when the cytokine is activated by T lymphocyte.
In one embodiment, the step of stimulating NK cells in a blood sample thereby artificially activating the NK cells to generate NK cell-secreting cytokines can be performed in medium containing a carrier protein. The carrier protein plays a role for stabilizing the cytokines such as interleukin 2, interleukin 12, interleukin 15 or interleukin 18 which are used as the agent for stimulating the NK cells in the blood sample and artificially activating the NK cells to generate the NK cell-secreting cytokines, and thereby inducing NK cells to produce more NK cell-secreting cytokines. The carrier protein may, in certain embodiments, be bovine serum albumin or human serum albumin, but is not limited thereto.
Meanwhile, the method of measuring NK cell activity may be used to screen the incidence or relapse of cancer.
The NK cell activity may be measured by comparing an amount of NK cell-secreting cytokines secreted from the artificially activated NK cells with an amount of NK cell-secreting cytokines from the normal person. In this case, when the amount of the NK cell-secreting cytokines is smaller than that of the NK cell-secreting cytokines from the normal person, the NK cell activity is considered to be reduced. Therefore, it is possible to assess the risk of cancer or a relapse of cancer. When NK cell activity is reduced compared to the normal person, a subject may be primarily classified as a patient suspected of suffering from cancer or a patient having a relapse of cancer. Also, the incidence or relapse of cancer may be diagnosed through an additional diagnostic method such as CT, MRI or positron emission tomography (PET) for usually performed diagnosis of cancer, and through a final tissue test. Although the method according to the present invention is not a method of definitively diagnosing cancer, the method has a good merit in that the incidence or relapse of cancer may be primarily screened using blood.
In addition, the present invention provides a kit for measuring NK cell activity, including an agent, such as an agonist or activator that serves to stimulate the NK cells in a blood sample and artificially activate the NK cells to generate NK cell-secreting cytokines. Such a kit for measuring NK cell activity may be used to readily perform the above-mentioned method of measuring NK cell activity.
In the kit for measuring NK cell activity, the agent that serves to stimulate the NK cells and artificially activate the NK cells to generate NK cell-secreting cytokines may be at least one cytokine, LPS or poly I:C, and the cytokine may be selected from the group consisting of interleukin 2, interleukin 12, interleukin 15 and interleukin 18.
In addition to the agent that serves to stimulate the NK cells and artificially activate the NK cells to generate the NK cell-secreting cytokines such as interferon-γ, such a cancer diagnosis kit may include additional components for measurement of NK cell activity, for example an antibody for quantifying the NK cell-secreting cytokines, and a substrate. In one embodiment, the kit of the present invention further comprises at least one antibody selected from the group of an anti-INF-γ antibody, anti-TNF-α antibody and anti-MIP-1β antibody.
The antibody in the kit according to the present invention may be fixed onto a solid substrate. The antibody may be fixed using various methods as described in the literature (Antibodies: A Laboratory Manual, Harlow & Lane; Cold Spring Harbor, 1988). The suitable solid substrate may include a cell culture plate, an ELISA plate, a tube and a polymeric film. In addition, the solid substrate includes a bar, a synthetic glass, an agarose bead, a cup, a flat pack, or other films or coatings that are supported by or attached to the solid supports.
Also, the kit according to the present invention may include a reagent used for immunological analysis with an antibody selectively recognizing the NK cell-secreting cytokiness such as interferon-γ. The immunological analysis may include all methods that can measure the binding of an antigen to the antibody according to the present invention. Such methods are known in the art, and include, for example, immunocytochemistry and immunohistochemistry, a radioimmunoassay, ELISA, immunoblotting, a Farr assay, precipitin reaction, a turbidimetric method, immunodiffusion, counter-current electrolysis, single-radical immunodiffusion and immunofluorescence.
The reagent used for the immunological analysis includes a suitable carrier, a label capable of generating a detectable signal, a dissolving agent, and a detergent. Also, when a labeling material is an enzyme, the reagent may include a substrate, which can measure the enzymatic activity, and a reaction stopping agent. The suitable carrier may include, but is not limited to, a soluble carrier, for example one of physiologically available buffers known in the art (for example, PBS) or an insoluble carrier, for example a polymer such as magnetic particles obtained by coating a metal onto polystyrene, polyethylene, polypropylene, polyester, polyacrylonitrile, a fluorine resin, crosslinkable dextran, polysaccharide and latex, and other papers, glasses, metals, agarose, and combinations thereof.
As the label that can generate a detectable signal, an enzyme, a fluorescent material, a luminescent material and a radioactive material may be used. As the enzyme, peroxidase, alkaline phosphatase, β-D-galactosidase, glucose oxidase, malate dehydrogenase, glucose-6-phosphate dehydrogenase, invertase and the like may be used, and isothiocyanate fluorescein or phycobiliprotein may be used as the fluorescent material, isolucinol or lucigenin may be used as the luminescent material, and I131, C14 or H3 may be used as the radioactive material. In addition to the exemplary materials, however, any materials that can be used for immunological analysis may be used herein.
In addition, the present invention provides a fusion protein including a cytokine bound to a C-terminal acidic tail domain peptide of a synuclein family. Here, the cytokine may be interleukin 2, interleukin 12, interleukin 15 or interleukin 18. As described above, such a fusion protein may be used as the agent that serves to stimulate the NK cells and artificially activate the NK cells to generate NK cell-secreting cytokines, and provides higher stability despite changes in environments such as freeze-drying or long-term storage, compared to a wild-type interleukin 2, interleukin 12, interleukin 15 or interleukin 18.
According to one exemplary embodiment, the fusion protein may be a fusion protein in which the interleukin 2 is bound to the C-terminal acidic tail domain peptide of the synuclein family.
According to another exemplary embodiment, the fusion protein may be a fusion protein in which the interleukin 12 is bound to the C-terminal acidic tail domain peptide of the synuclein family.
According to still another exemplary embodiment, the fusion protein may be a fusion protein in which the interleukin 15 is bound to the C-terminal acidic tail domain peptide of the synuclein family.
According to yet another exemplary embodiment, the fusion protein may be a fusion protein in which the interleukin 18 is bound to the C-terminal acidic tail domain peptide of the synuclein family.
In the fusion protein, the C-terminal acidic tail domain peptide of the synuclein family may also be selected from amino acid residues 103-115, amino acid residues 114-126, amino acid residues 119-140 and amino acid residues 130-140 of the C-terminal acidic tail domain of α-synuclein, amino acid residues 85-134 of the C-terminal acidic tail domain of β-synuclein, amino acid residues 96-127 of the C-terminal acidic tail domain of γ-synuclein, and amino acid residues 96-127 of the C-terminal acidic tail domain of synoretin.
In addition, the present invention provides the use of the fusion protein for activating the NK cells. As described above, such a fusion protein may be used to activate NK cells in blood to promote secretion of NK cell-secreting cytokines.
Therefore, the present invention provides a composition for activating NK cells. Here, the composition includes at least one fusion protein selected from the group consisting of interleukin 2 bound to a C-terminal acidic tail domain peptide of a synuclein family, interleukin 12 bound to the C-terminal acidic tail domain peptide of the synuclein family, interleukin 15 bound to the C-terminal acidic tail domain peptide of the synuclein family, and interleukin 18 bound to the C-terminal acidic tail domain peptide of the synuclein family.
According to one exemplary embodiment, the C-terminal acidic tail domain peptide of the synuclein family may be selected from amino acid residues 103-115, amino acid residues 114-126, amino acid residues 119-140 and amino acid residues 130-140 of the C-terminal acidic tail domain of α-synuclein, amino acid residues 85-134 of the C-terminal acidic tail domain of β-synuclein, amino acid residues 96-127 of the C-terminal acidic tail domain of γ-synuclein, and amino acid residues 96-127 of the C-terminal acidic tail domain of synoretin.
Meanwhile, the composition for activating NK cells may include a buffer capable of keeping and storing the fusion protein, in addition to the cytokines fused with the stabilizing peptide.
Furthermore, the present invention provides a cancer diagnosis kit including at least one fusion protein selected from the group consisting of interleukin 2 bound to a C-terminal acidic tail domain peptide of a synuclein family, interleukin 12 bound to the C-terminal acidic tail domain peptide of the synuclein family, interleukin 15 bound to the C-terminal acidic tail domain peptide of the synuclein family, and interleukin 18 bound to the C-terminal acidic tail domain peptide of the synuclein family. As described above, when a blood sample taken from a subject is incubated with the fusion protein, the NK cells in the blood sample are activated. Therefore, NK cell activity in the subject may be measured by quantifying interferon-γ generated by activation of the NK cells, thereby primarily diagnosing cancer by classifying subjects who have a lower NK cell activity than that of a normal person as patients who are at risk of suffering from cancer or having a relapse of cancer.
According to one exemplary embodiment, the C-terminal acidic tail domain peptide of the synuclein family may be selected from amino acid residues 103-115, amino acid residues 114-126, amino acid residues 119-140 and amino acid residues 130-140 of the C-terminal acidic tail domain of α-synuclein, amino acid residues 85-134 of the C-terminal acidic tail domain of β-synuclein, amino acid residues 96-127 of the C-terminal acidic tail domain of γ-synuclein, and amino acid residues 96-127 of the C-terminal acidic tail domain of synoretin.
In addition to the fusion protein, such a cancer diagnosis kit may include additional components used to perform the diagnostic method according to the present invention, for example an antibody for quantifying the NK cell-secreting cytokines, and a substrate. These components have been described above in connection with the kit for measuring NK cell activity. Instructions for using these components in the above-described method may also be included in the kit.
It will be apparent that these and other features, aspects, and advantages of preferred embodiments of the present invention will be more fully described in the following examples. It is also to be understood that these examples are provided for the purpose of illustration only, and are not intended to limit the scope of the invention. One skilled in the art will understand that other equivalents and modifications can be made without departing from the scope of the invention as claimed.
In order to prepare IL-2, IL-12 IL-15 or IL-18 fused with a stabilizing peptide, an expression vector was constructed. A peptide containing amino acid residues 119-140 of the α-synuclein (SEQ ID NO: 23; hereinafter, referred to as “SP”) was used as the stabilizing peptide. cDNAs of IL2, IL12p35, IL12p40, IL15 and IL-18 were obtained by isolating total RNA from human lymphocytes using a total RNA extraction kit (Invitron Biotechnology) and reverse-transcribing the total RNA using reverse transcriptase (Invitrogen). The resultant cDNA was used as a template, and amplified with PCR using the following primers specific to each cDNA gene:
Nucleic acid and amino acid sequences of the SP-hIL2 fusion product are set forth in SEQ ID NOS: 1 and 2, respectively. Nucleic acid and amino acid sequences of the SP-hIL12p40 fusion product are set forth in SEQ ID NOS: 3 and 4, respectively. Nucleic acid and amino acid sequences of the SP-hIL12p35 fusion product are set forth in SEQ ID NOS: 5 and 6, respectively. As shown in
The expression vector constructed to express the recombinant SP-hIL2 protein was transformed into Escherichia coli BL21(DE3)RIPL (Invitrogen), and incubated. A culture solution was centrifuged at 10,000 rpm for 10 minutes to obtain a cell pellet. The cell pellet was re-suspended in phosphate buffered saline (PBS, pH 7.4), and then homogenized by sonication. The SP fusion protein expressed in an insoluble form in E. coli was subjected to a refolding procedure, and then purified using an ion-exchange resin.
The two expression vectors constructed to express the recombinant SP-hIL12 protein were transfected into insect cell lines, sf21 cells, to produce viral culture solutions, respectively. The two resultant viral culture solutions were transfected into an insect sf21 cell line at the same time to produce a heterodimeric IL12p70 protein in which the IL12p40 was bound to the IL12p35, which was then purified.
The expression vector constructed to express the recombinant hIL15-SP protein was transformed into E. coli BL21(DE3)RIPL (Invitrogen), and then incubated. A culture solution was centrifuged at 10,000 rpm for 10 minutes to obtain a cell pellet. The cell pellet was re-suspended in PBS (pH 7.4), and then homogenized by sonication. The SP fusion protein expressed in a soluble form in E. coli was purified using an ion-exchange resin.
The expression vector constructed to express the recombinant SP-hIL18 protein was transformed into E. coli BL21(DE3)RIPL (Invitrogen), and then incubated. A culture solution was centrifuged at 10,000 rpm for 10 minutes to obtain a cell pellet. The cell pellet was re-suspended in PBS (pH 7.4), and then homogenized by sonication. The SP fusion protein expressed in a soluble form in E. coli was purified using an ion-exchange resin.
The purified SP fusion protein (3 ug) was electrophoresed using 15% SDS-PAGE to confirm a final purified protein (
1 ml of whole blood from a normal person and 1 ml of an RPMI1640 medium were put into a 24-well cell culture plate, mixed with 10 ng/ml of each of recombinant human interleukins IL-2, IL-12, IL-15 and IL-18, and then cultured for 24 hours. After the 24-hour culture, a supernatant was taken, and an amount of interferon-γ in the supernatant was measured using a sandwich ELISA method (
Also, 1 ml of whole blood from a normal person and 1 ml of an RPMI1640 medium were put into a 24-well cell culture plate, treated with various combinations of recombinant human interleukins as shown in
Further, in order to measure a level of interferon-γ after the treatment with a combination of IL-12 and IL-15, the whole blood was treated with a concentration of the NK cell stimulator as shown in
In order to measure a level of interferon-γ after the treatment of a combination of IL-12 and IL-18, the whole blood was also treated with a concentration of the NK cell stimulator as shown in
Whole blood samples were taken from 61 normal persons and 50 cancer patients. 1 ml of the whole blood and 1 ml of an RPMI1640 medium were put into a 24-well cell culture plate, treated with 10 ng/ml of a recombinant human interleukin SP IL-2, and then cultured for 24 hours. After the 24-hour culture, a supernatant was taken, and levels of interferon-γ, TNF-α and MIP-1β were then measured using a sandwich ELISA method. As a result, it was confirmed that the interferon-γ and TNF-α were secreted from the whole blood of the normal person in a smaller amount than that of the cancer patient, but the MIP-1β was secreted from the whole blood samples of the normal person and the cancer patient, as shown in
In the case of in vitro diagnostic reagents used in a disease test, a variety of validation techniques were used. In general, a normal range and a cut-off assay were used herein. The normal range is a reference range which is used to measure an average value and a standard deviation of each group of samples, and the cut-off assay is a method of measuring clinical sensitivity and specificity by calculating an estimated value of an in vitro diagnostic reagent. The clinical sensitivity means a probability of being proven to show positive results of a diagnostic test when a patient suffers from a disease, and the clinical specificity means a probability of being proven to show negative results of the diagnostic test when a patient does not suffer from a disease.
Assume that, when a cut-off value is more than 10% and less than 10%, the cut-off value is set to positive and negative values, respectively. Then, the clinical sensitivity and clinical specificity were measured using a cut-off assay. The results are listed in Table 1.
In the groups of cancer patients and normal persons, IFN-γ was measured to have a sensitivity of 98.4% and a specificity of 98%. Although TNF-α was measured to have a sensitivity of 90.9% and a specificity of 69%, which were lower than those of IFN-γ, cancer diagnostic kits developed up to date have a specificity of at most 20 to 30%. Thus, it is expected that the TNF-α having a specificity of approximately 70% or more may also be used as a marker for cancer diagnostic kits to measure the NK cell activity.
In order to compare the stabilities of SP IL-2 and IL-2, whole blood samples were taken from two persons. 1 ml of each obtained whole blood sample and 1 ml of an RPMI1640 medium were put into a 24-well cell culture plate, and SP IL-2 and IL-2 were then added, thoroughly mixed, and then cultured for 24 hours. After the 24-hour culture, a supernatant was taken, and a level of interferon-γ was measured using a sandwich ELISA method. From the results of the IL-2 and SP IL-2 activity assays, it was seen that there was no difference in activities of the two proteins (
1 ml of each of whole blood samples taken from 20 normal persons and 48 terminal (stage 3 to 4) cancer patients, and 1 ml of an RPMI1640 medium were put into a 24-well culture plate, each sample was divided into two sub-groups, and the sub-groups were treated with SP IL-2 (10 ng/ml) (Condition A) and SP IL-2 (5 ng/ml)+IL-12 (5 ng/ml) (Condition B), respectively, and then cultured for 24 hours. After the culture, a supernatant was taken, and a level of interferon-γ was measured using a sandwich ELISA method.
As a result, it was seen that approximately 90% of the normal persons had a high interferon-γ level but most of the cancer patients had a low interferon-γ level in the case of Condition A, as shown in
In order to determine the difference in interferon-γ secretion capability by IL2 according to the type of blood samples from normal persons, the following experiment was performed. (a) The interferon-γ secretion capability of the NK cells on 1 ng/ml of IL2 from the T cells, (b) the interferon-γ secretion capability of the NK cells on 1 ng/ml of IL2 from the NK cells, (c) the interferon-γ secretion capability of the NK cells on 1 ng/ml of IL2 from the whole blood, and (d) the interferon-γ secretion capability of the NK cells according to concentration of IL2 from the PBMC were measured. The results are shown in
As another example of the agent that serves to stimulate NK cells in a blood sample and artificially activate the NK cells to generate interferon-γ, LPS was used to measure an amount of interferon-γ from human whole blood. As shown in
As a tube for incubating NK cells, a tube (BD) containing an anticoagulant, sodium heparin, was purchased and used to prevent coagulation of blood. 5 ml of whole blood was taken and put into the tube containing the anticoagulant (sodium heparin). 1 ml of the obtained whole blood was mixed with RPIM1640 medium, and activators of NK cells, SP-hIL2/hIL12 were added thereto. The resultant mixture was incubated at 37° C. for 16 to 24 hours. The stimulation of the NK cells in the whole blood by the SP hIL2 fused with the stabilizing peptide and hIL12 was determined by measuring an amount of the interferon-γ in blood incubated according to the method described in the above Experimental Example.
Meanwhile, the amount of the interferon-γ secreted according to the culture conditions of the whole blood was measured. As shown in
In order to determine an amount of the interferon-γ secreted according to the progress stage of cancer, whole blood from cancer patient 1 (a patient completely recovered from breast cancer), cancer patient 2 (a patient suspected of suffering from brain cancer), and a normal person was incubated for 24 hours in RPMI1640 medium supplemented with 100 ng/ml of IL12 and 1000 ng/ml of IL15, and amounts of the secreted interferon-γ were measured as described above. Also, the whole blood was subjected to flow cytometry.
As a result, the interferon-γ secretion capabilities were confirmed in order of the normal person, the cancer patient 1 and the cancer patient 2, as shown in
As a tube for incubating NK cells, a tube (BD) containing an anticoagulant, sodium heparin, was purchased and used to prevent coagulation of blood. 5 ml of whole blood was taken from eight normal persons and put into the tube containing the anticoagulant (sodium heparin). 1 ml of the obtained whole blood was mixed with RPIM1640 medium, and SP-hIL12/hIL15-SP bound to stabilizing peptide were added thereto. The resultant mixture was incubated at 37° C. for 16 to 24 hours.
Whole blood from eight normal persons incubated at 37° C. was centrifuged at 1500 to 2000 g to obtain serum as a supernatant. Then, 150 to 200 ul of the serum was taken and subjected to interferon-γ ELISA. 0.05% Tween primary antibody (anti-human interferon-γ monoclonal antibody, ATGen Cat #ATGK02) was diluted with a coating buffer (0.1 sodium carbonate, pH 9.5) at a ratio of 1:1000. The diluted primary antibody was divided onto a 96-well microtiter ELISA plate (Nunc MAXISORP™; NUNC, Naperville, Ill.) at a dose of 100 ul/well, and kept at 4° C. for 16 to 18 hours. Thereafter, a solution in the plate was removed, and the plate was washed with a washing solution (PBS containing 0.05% Tween 20) at a dose of 400 ul/well. In this case, the washing was performed three times. Then, PBS containing 10% fetal bovine serum (FBS) was divided at a dose of 300 ul/well, and kept at room temperature for 1 hour. Thereafter, a solution in the plate was removed, and the plate was washed with PBST (a PBS solution containing 0.05% Tween 20) at a dose of 400 ul/well. In this case, the washing was performed three times. The 96-well microtiter ELISA plate coated with the primary antibody was sealed, and stored at 4° C. for use.
An interferon-γ standard solution (PBS containing 200 ng of recombinant human interferon-γ (ATGen, Cat #IFG4001) and 0.05% Proclin 300) was diluted and divided at a dose of 100 ul/well into the 96-well microtiter ELISA plate coated with the primary antibody, and the patient's serum prepared in the experimental stage was divided at a dose of 100 ul/well, and then kept at room temperature for 2 hours.
After 2 hours, a solution in the 96-well microtiter ELISA plate was removed, and the plate was washed with a washing solution at a dose of 400 ul/well. In this case, the washing was performed three times. Then, a secondary antibody (biotinylated anti-human interferon-γ monoclonal antibody (ATGen Cat #ATGK03)) was diluted with a dilute solution at a ratio of 1:500, divided at a dose of 100 ul/well, and then kept at room temperature for 1 hour. Thereafter, solution in the plate was removed, and the plate was washed three times with a washing solution at a dose of 400 ul/well. An HRP-conjugated streptavidin solution (Thermo Scientific, Cat #21130) was diluted with a dilute solution at a ratio of 1:3000, divided at a dose of 100 ul/well, and then kept at room temperature for 30 minutes. Then, the diluted HRP-conjugated streptavidin solution was divided into the ELISA plate, and incubated for 1 hour. After the one-hour incubation, a solution in the 96-well microtiter ELISA plate was removed, and the plate was washed three times with a washing solution at a dose of 400 ul/well.
1 mg of tetramethylbenzidine (TMB) was dissolved in 1 ml of dimethylsulfoxide (DMSO), and the resultant mixture was diluted with 9 ml of 0.05 M phosphate citrate buffer to prepare a substrate solution. Then, the substrate solution was divided into the plate at a dose of 100 ul/well, and kept at room temperature for 30 minutes.
A reaction-stopping solution (a 2 N dilute sulfuric acid solution) was divided at a dose of 100 ul/well to stop the reaction, and the resultant reaction solution was measured at 450 nm using an ELISA reader.
The interferon-γ secretion capabilities of the NK cells measured using the whole blood from eight normal persons are shown in
Furthermore, after the whole blood from the eight normal persons was stimulated by the cytokine, the whole blood was subjected to flow cytometry. The results are shown in
According to the present invention, the incidence or relapse of cancer may be diagnosed by monitoring changes in an in vivo immune system and measuring NK cell activity in blood, for instance in a subject with or suspected of having cancer. The present invention may therefore be useful in predicting the incidence or relapse of cancer using a blood sample from a subject.
While exemplary embodiments have been disclosed herein, it should be understood that other variations may be possible. Such variations are not to be regarded as a departure from the scope of exemplary embodiments of the present application, and all such modifications as would be obvious to one skilled in the art are intended to be included within the scope of the following claims.
All documents cited herein are hereby incorporated by reference.
| Number | Date | Country | Kind |
|---|---|---|---|
| 10-2011-0012983 | Feb 2011 | KR | national |
This application is a continuation under 35 U.S.C. § 120 of co-pending U.S. application Ser. No. 13/985,301 filed Sep. 23, 2013, which is a 35 U.S.C. § 371 National Phase Entry Application of International Application No. PCT/IB2012/000259 filed Feb. 10, 2012, which designates the U.S., and which claims priority to and the benefit of Korean Patent Application No. 10-2011-0012983, filed on Feb. 14, 2011, the contents of which are incorporated herein by reference in their entireties.
| Number | Date | Country | |
|---|---|---|---|
| Parent | 13985301 | Sep 2013 | US |
| Child | 17691391 | US |
