Pesticidal proteins

Information

  • Patent Grant
  • 6677148
  • Patent Number
    6,677,148
  • Date Filed
    Tuesday, August 22, 2000
    24 years ago
  • Date Issued
    Tuesday, January 13, 2004
    20 years ago
Abstract
The subject invention concerns new classes of pesticidally active proteins and the polynucleotide sequences that encode these proteins. In preferred embodiments, these pesticidal proteins have molecular weights of approximately 40-50 kDa and of approximately 10-15 kDa.
Description




BACKGROUND OF THE INVENTION




Coleopterans are a significant group of agricultural pests which cause extensive damage to crops each year. Examples of coleopteran pests include corn rootworm and alfalfa weevils.




The alfalfa weevil,


Hypera postica


, and the closely related Egyptian alfalfa weevil,


Hypera brunneipennis


, are the most important insect pests of alfalfa grown in the United States, with 2.9 million acres infested in 1984. An annual sum of 20 million dollars is spent to control these pests. The Egyptian alfalfa weevil is the predominant species in the southwestern U.S., where it undergoes aestivation (i.e., hibernation) during the hot summer months. In all other respects, it is identical to the alfalfa weevil, which predominates throughout the rest of the U.S.




The larval stage is the most damaging in the weevil life cycle. By feeding at the alfalfa plant's growing tips, the larvae cause skeletonization of leaves, stunting, reduced plant growth, and, ultimately, reductions in yield. Severe infestations can ruin an entire cutting of hay. The adults, also foliar feeders, cause additional, but less significant, damage.




Approximately 10 million acres of U.S. corn are infested with corn rootworn species complex each year. The corn rootworm species complex includes the northern corn rootworm,


Diabrotica barberi


, the southern corn rootworm,


D. undecimpunctata howardi


, and the western corn rootworm,


D. virgifera virgifera


. The soil-dwelling larvae of these Diabrotica species feed on the root of the corn plant, causing lodging. Lodging eventually reduces corn yield and often results in death of the plant. By feeding on cornsilks, the adult beetles reduce pollination and, therefore, detrimentally affect the yield of corn per plant. In addition, adults and larvae of the genus Diabrotica attack cucurbit crops (cucumbers, melons, squash, etc.) and many vegetable and field crops in commercial production as well as those being grown in home gardens.




Control of corn rootworm has been partially addressed by cultivation methods, such as crop rotation and the application of high nitrogen levels to stimulate the growth of an adventitious root system. However, chemical insecticides are relied upon most heavily to guarantee the desired level of control. Insecticides are either banded onto or incorporated into the soil. Problems associated with the use of some chemical insecticides are environmental contamination and the development of resistance among the treated insect populations.




The soil microbe


Bacillus thuringiensis


(


B.t


.) is a Gram-positive, spore-forming bacterium characterized by parasporal protein inclusions, which can appear microscopically as distinctively shaped crystals. Certain strains of


B.t


. produce proteins that are toxic to specific orders of pests. Certain


B.t


. toxin genes have been isolated and sequenced, and recombinant DNA-based


B.t


. products have been produced and approved for use. In addition, with the use of genetic engineering techniques, new approaches for delivering these


B.t


. endotoxins to agricultural environments are under development, including the use of plants genetically engineered with endotoxin genes for insect resistance and the use of stabilized intact microbial cells as


B.t


. endotoxin delivery vehicles (Gaertner, F. H., L. Kim [1988


] TIBTECH


6:S4-S7). Thus, isolated


B.t


. endotoxin genes are becoming commercially valuable.




Commercial use of


B.t


. pesticides was originally limited to a narrow range of lepidopteran (caterpillar) pests. Preparations of the spores and crystals of


B. thuringiensis


subsp. kurstaki have been used for many years as commercial insecticides for lepidopteran pests. For example,


B. thuringiensis


var. kurstaki HD-1 produces a crystalline δ-endotoxin which is toxic to the larvae of a number of lepidopteran insects.




In recent years, however, investigators have discovered


B.t


. pesticides with specificities for a much broader range of pests. For example, other species of


B.t


., namely israelensis and tenebrionis (a.k.a.


B.t


. M-7, a.k.a.


B.t. san diego


), have been used commercially to control insects of the orders Diptera and Coleoptera, respectively (Gaertner, F. H. [1989] “Cellular Delivery Systems for Insecticidal Proteins: Living and Non-Living Microorganisms,” in


Controlled Delivery of Crop Protection Agents


, R. M. Wilkins, ed., Taylor and Francis, New York and London, 1990, pp. 245-255). See also Couch, T. L. (1980) “Mosquito Pathogenicity of


Bacillus thuringiensis


var. israelensis,”


Developments in Industrial Microbiology


22:61-76; Beegle, C. C., (1978) “Use of Entomogenous Bacteria in Agroecosystems,”


Developments in Industrial Microbiology


20:97-104. Krieg, A., A. M. Huger, G. A. Langenbruch, W. Schnetter (1983)


Z. ang. Ent


. 96:500-508, describe


Bacillus thuringiensis


var. tenebrionis, which is reportedly active against two beetles in the order Coleoptera. These are the Colorado potato beetle,


Leptinotarsa decemlineata


, and


Agelastica alni.






Recently, new subspecies of


B.t


. have been identified, and genes responsible for active δ-endotoxin proteins have been isolated (Höfte, H., H. R. Whiteley [1989


] Microbiological Reviews


52(2):242-255). Höfte and Whiteley classified


B.t


. crystal protein genes into four major classes. The classes were CryI (Lepidoptera-specific), CryII (Lepidoptera- and Diptera-specific), CryIII (Coleoptera-specific), and CryIV (Diptera-specific). The discovery of strains specifically toxic to other pests has been reported. (Feitelson, J. S., J. Payne, L. Kim [1992


] Bio/Technology


10:271-275).




The 1989 nomenclature and classification scheme of Höfte and Whiteley for crystal proteins was based on both the deduced amino acid sequence and the host range of the toxin. That system was adapted to cover fourteen different types of toxin genes which were divided into five major classes. As more toxin-genes were discovered, that system started to become unworkable, as genes with similar sequences were found to have significantly different insecticidal specificities. A revised nomenclature scheme has been proposed which is based solely on amino acid identity (Crickmore et al. [1996] Society for Invertebrate Pathology, 29th Annual Meeting, 3rd International Colloquium on


Bacillus thuringiensis


, University of Cordoba, Cordoba, Spain, September 1-6, abstract). The mnemonic “cry” has been retained for all of the toxin genes except cytA and cytB, which remain a separate class. Roman numerals have been exchanged for Arabic numerals in the primary rank, and the parentheses in the tertiary rank have been removed. Current boundaries represent approximately 95% (tertiary rank), 75% (secondary rank), and 48% (primary rank) sequence identity. Many of the original names have been retained, with the noted exceptions, although a number have been reclassified. See also N. Crickmore, D. R. Zeigler, J. Feitelson, E. Schnepf, J. Van Rie, D. Lereclus, J. Baum, and D. H. Dean (1998), “Revisions of the Nomenclature for the


Bacillus thuringiensis


Pesticidal Crystal Proteins,”


Microbiology and Molecular Biology Reviews


Vol. 62:807-813; and Crickmore, Zeigler, Feitelson, Schnepf, Van Rie, Lereclus, Baum, and Dean, “Bacillus thuringiensis toxin nomenclature” (1999) http://www.biols.susx.ac.uk/Home/Neil_Crickmore/Bt/index.html. That system uses the freely available software applications CLUSTAL W and PHYLIP. The NEIGHBOR application within the PHYLIP package uses an arithmetic averages (UPGMA) algorithm.




The cloning and expression of a


B.t


. crystal protein gene in


Escherichia coli


has been described in the published literature (Schnepf, H. E., H. R. Whiteley [1981


] Proc. Natl. Acad. Sci. USA


78:2893-2897). U.S. Pat. No. 4,448,885 and U.S. Pat. No. 4,467,036 both disclose the expression of


B.t


. crystal protein in


E. coli.






U.S. Pat. Nos. 4,797,276 and 4,853,331 disclose


B. thuringiensis


strain tenebrionis (a.k.a. M-7, a.k.a.


B.t. san diego


), which can be used to control coleopteran pests in various environments. U.S. Pat. No. 4,918,006 discloses


B.t


. toxins having activity against Dipterans. U.S. Pat. No. 4,849,217 discloses


B.t


. isolates which have activity against the alfalfa weevil. U.S. Pat. No. 5,208,077 discloses coleopteran-active


Bacillus thuringiensis


isolates. U.S. Pat. No. 5,632,987 discloses a 130 kDa toxin from PS80JJ1 as having activity against corn rootworm. WO 94/40162, which is related to the subject application, describes new classes of proteins that are toxic to corn rootworn. U.S. Pat. No. 5,151,363 and U.S. Pat. No. 4,948,734 disclose certain isolates of


B.t


. which have activity against nematodes.




U.S. Pat. No. 6,083,499 and WO 97/40162 disclose “binary toxins.” The subject invention is distinct from mosquitocidal toxins produced by


Bacillus sphaericus


. See EP 454 485; Davidson et al. (1990), “Interaction of the


Bacillus sphaericus


mosquito larvicidal proteins,”


Can. J. Microbio


. 36(12):870-8; Baumann et al. (1988), “Sequence analysis of the mosquitocidal toxin genes encoding 51.4- and 41.9-kilodalton proteins from


Bacillus sphaericus


2362 and 2297


,” J. Bacteriol


. 170:2045-2050; Oei et al. (1992), “Binding of purified


Bacillus sphaericus


binary toxin and its deletion derivatives to


Culex quinquefasciatus


gut: elucidation of functional binding domains,”


Journal of General Microbiology


138(7):1515-26.




BRIEF SUMMARY OF THE INVENTION




The subject invention concerns novel materials and methods for controlling non-mammalian pests. In a preferred embodiment, the subject invention provides materials and methods for the control of coleopteran pests. In more preferred embodiments, the materials and methods described herein are used to control corn rootworm—most preferably Western corn rootworm. Lepidopteran pests (including the European corn borer and Helicoverpa zea) can also be controlled by the pesticidal proteins of the subject invention.




The subject invention advantageously provides polynucleotides and pesticidal proteins encoded by the polynucleotides. In preferred embodiments, a 40-50 kDa protein and a 10-15 kDa protein are used together, with the proteins being pesticidal in combination. Thus, the two classes of proteins of the subject invention can be referred to as “binary toxins.” As used herein, the term “toxin” or “pesticidal protein” includes either class of these proteins. The use of a 40-50 kDa protein with a 10-15 kDa protein is preferred but not necessarily required. One class of polynucleotide sequences as described herein encodes proteins which have a full-length molecular weight of approximately 40-50 kDa. In a specific embodiment, these proteins have a molecular weight of about 43-47 kDa. A second class of polynucleotides of the subject invention encodes pesticidal proteins of about 10-15 kDa. In a specific embodiment, these proteins have a molecular weight of about 13-14 kDa. It should be clear that each type of toxin/gene is an aspect of the subject invention. In a particularly preferred embodiment, a 40-50 kDa protein of the subject invention is used in combination with a 10-15 kDa protein. Thus, the proteins of the subject invention can be used to augment and/or facilitate the activity of other protein toxins.




The subject invention includes polynucleotides that encode the 40-50 kDa or the 10-15 kDa toxins, polynucleotides that encode portions or fragments of the full length toxins that retain pesticidal activity (preferably when used in combination), and polynucleotides that encode both types of toxins. Novel examples of fusion proteins (a 40-50 kDa protein and a 10-15 kDa protein fused together) and polynucleotides that encode them are also disclosed herein.




In some embodiments,


B.t


. toxins useful according to the invention include toxins which can be obtained from the novel


B.t


. isolates disclosed herein. It should be clear that, where 40-50 kDa and 10-15 kDa toxins, for example, are used together, one type of toxin can be obtained from one isolate and the other type of toxin can be obtained from another isolate.




The subject invention also includes the use of variants of the exemplified


B.t


. isolates and toxins which have substantially the same coleopteran-active properties as the specifically exemplified


B.t


. isolates and toxins. Such variant isolates would include, for example, mutants. Procedures for making mutants are well known in the microbiological art. Ultraviolet light and chemical mutagens such as nitrosoguanidine are used extensively toward this end.




In preferred embodiments, the subject invention concerns plants and plant cells having at least one isolated polynucleotide of the subject invention. Preferably, the transgenic plant cells express pesticidal toxins in tissues consumed by the target pests.




Alternatively, the


B.t


. isolates of the subject invention, or recombinant microbes expressing the toxins described herein, can be used to control pests. In this regard, the invention includes the treatment of substantially intact


B.t


. cells, and/or recombinant cells containing the expressed toxins of the invention, treated to prolong the pesticidal activity when the substantially intact cells are applied to the environment of a target pest. The treated cell acts as a protective coating for the pesticidal toxin.




The toxins of the subject invention are oral intoxicants that affect an insect's midgut cells upon ingestion by the target insect. Thus, by consuming recombinant host cells, for example, that express the toxins, the target insect thereby contacts the proteins of the subject invention, which are toxic to the pest. This results in control of the target pest.











BRIEF DESCRIPTION OF THE DRAWINGS





FIGS. 1A and 1B

show three exemplary 43-47 kDa pesticidal toxins as well as a consensus sequence for these pesticidal toxins.





FIG. 2

shows the relationship of the 14 and 45 kDa sequences of PS80JJ1 (SEQ ID NOS. 31 and 10).





FIG. 3

shows a comparison of LC


50


values from the mixing study of Example 23.





FIG. 4

shows protein alignments of the 51 and 42 kDa


Bacillus sphaericus


toxins and genes and the 45 kDa 149B1 toxin and gene.





FIGS. 5A-5C

show nucleotide sequence alignments of the 51 and 42 kDa


Bacillus sphaericus


toxins and genes and the 45 kDa 149B1 toxin and gene.











BRIEF DESCRIPTION OF THE SEQUENCES




SEQ ID NO:1 is a 5-amino acid N-terminal sequence of the approximately 45 kDa toxin of 80JJ1.




SEQ ID NO:2 is a 25-amino acid N-terminal sequence of the approximately 45 kDa toxin of 80JJ1.




SEQ ID NO:3 is a 24-amino acid N-terminal sequence of the approximately 14 kDa toxin of 80JJ1.




SEQ ID NO:4 is the N-terminal sequence of the approximately 47 kDa toxin from 149B1.




SEQ ID NO:5 is a 50-amino acid N-terminal amino acid sequence for the purified approximately 14 kDa protein from PS149B1.




SEQ ID NO:6 is the N-terminal sequence of the approximately 47 kDa toxin from 167H2.




SEQ ID NO:7 is a 25-amino acid N-terminal sequence for the purified approximately 14 kDa protein from PS167H2.




SEQ ID NO:8 is an oligonucleotide probe for the gene encoding the PS80JJ1 44.3 kDa toxin and is a forward primer for PS149B1 and PS167H2 used according to the subject invention.




SEQ ID NO:9 is a reverse primer for PS149B1 and PS167H2 used according to the subject invention.




SEQ ID NO:10 is the nucleotide sequence of the gene encoding the approximately 45 kDa PS80JJ1 toxin.




SEQ ID NO:11 is the amino acid sequence for the approximately 45 kDa PS80JJ1 toxin.




SEQ ID NO:12 is the partial nucleotide sequence of the gene encoding the approximately 44 kDa PS149B1 toxin.




SEQ ID NO:13 is the partial amino acid sequence for the approximately 44 kDa PS149B1 toxin.




SEQ ID NO:14 is the partial nucleotide sequence of the gene encoding the approximately 44 kDa PS167H2 toxin.




SEQ ID NO:15 is the partial amino acid sequence for the approximately 44 kDa PS167H2 toxin.




SEQ ID NO:16 is a peptide sequence used in primer design according to the subject invention.




SEQ ID NO:17 is a peptide sequence used in primer design according to the subject invention.




SEQ ID NO:18 is a peptide sequence used in primer design according to the subject invention.




SEQ ID NO:19 is a peptide sequence used in primer design according to the subject invention.




SEQ ID NO:20 is a nucleotide sequence corresponding to the peptide of SEQ ID NO:16.




SEQ ID NO:21 is a nucleotide sequence corresponding to the peptide of SEQ ID NO:17.




SEQ ID NO:22 is a nucleotide sequence corresponding to the peptide of SEQ ID NO:18.




SEQ ID NO:23 is a nucleotide sequence corresponding to the peptide of SEQ ID NO:19.




SEQ ID NO:24 is a reverse primer based on the reverse complement of SEQ ID NO:22.




SEQ ID NO:25 is a reverse primer based on the reverse complement of SEQ ID NO:23.




SEQ ID NO:26 is a forward primer based on the PS80JJ1 44.3 kDa toxin.




SEQ ID NO:27 is a reverse primer based on the PS80JJ1 44.3 kDa toxin.




SEQ ID NO:28 is a generic sequence representing a new class of toxins according to the subject invention.




SEQ ID NO:29 is an oligonucleotide probe used according to the subject invention.




SEQ ID NO:30 is the nucleotide sequence of the entire genetic locus containing open reading frames of both the 14 and 45 kDa PS80JJ1 toxins and the flanking nucleotide sequences.




SEQ ID NO:31 is the nucleotide sequence of the PS80JJ1 14 kDa toxin open reading frame.




SEQ ID NO:32 is the deduced amino acid sequence of the 14 kDa toxin of PS80JJ1.




SEQ ID NO:33 is a reverse oligonucleotide primer used according to the subject invention.




SEQ ID NO:34 is the nucleotide sequence of the entire genetic locus containing open reading frames of both the 14 and 44 kDa PS167H2 toxins and the flanking nucleotide sequences.




SEQ ID NO:35 is the nucleotide sequence of the gene encoding the approximately 14 kDa PS167H2 toxin.




SEQ ID NO:36 is the amino acid sequence for the approximately 14 kDa PS167H2 toxin.




SEQ ID NO:37 is the nucleotide sequence of the gene encoding the approximately 44 kDa PS167H2 toxin.




SEQ ID NO:38 is the amino acid sequence for the approximately 44 kDa PS167H2 toxin.




SEQ ID NO:39 is the nucleotide sequence of the entire genetic locus containing open reading frames of both the 14 and 44 kDa PS149B1 toxins and the flanking nucleotide sequences.




SEQ ID NO:40 is the nucleotide sequence of the gene encoding the approximately 14 kDa PS149B1 toxin.




SEQ ID NO:41 is the amino acid sequence for the approximately 14 kDa PS149B1 toxin.




SEQ ID NO:42 is the nucleotide sequence of the gene encoding the approximately 44 kDa PS149B1 toxin.




SEQ ID NO:43 is the amino acid sequence for the approximately 44 kDa PS149B1 toxin.




SEQ ID NO:44 is a maize-optimized gene sequence encoding the approximately 14 kDa toxin of 80JJ1.




SEQ ID NO:45 is a maize-optimized gene sequence encoding the approximately 44 kDa toxin of 80JJ1.




SEQ ID NO:46 is the DNA sequence of a reverse primer used in Example 15, below.




SEQ ID NO:47 is the DNA sequence of a forward primer (see Example 16).




SEQ ID NO:48 is the DNA sequence of a reverse primer (see Example 16).




SEQ ID NO:49 is the DNA sequence of a forward primer (see Example 16).




SEQ ID NO:50 is the DNA sequence of a reverse primer (see Example 16).




SEQ ID NO:51 is the DNA sequence from PS131W2 which encodes the 14 kDa protein.




SEQ ID NO:52 is the amino acid sequence of the 14 kDa protein of PS131W2.




SEQ ID NO:53 is a partial DNA sequence from PS131W2 for the 44 kDa protein.




SEQ ID NO:54 is a partial amino acid sequence for the 44 kDa protein of PS131W2.




SEQ ID NO:55 is the DNA sequence from PS158T3 which encodes the 14 kDa protein.




SEQ ID NO:56 is the amino acid sequence of the 14 kDa protein of PS158T3.




SEQ ID NO:57 is a partial DNA sequence from PS158T3 for the 44 kDa protein.




SEQ ID NO:58 is a partial amino acid sequence for the 44 kDa protein of PS158T3.




SEQ ID NO:59 is the DNA sequence from PS158X10 which encodes the 14 kDa protein.




SEQ ID NO:60 is the amino acid sequence of the 14 kDa protein of PS158X10.




SEQ ID NO:61 is the DNA sequence from PS185FF which encodes the 14 kDa protein.




SEQ ID NO:62 is the amino acid sequence of the 14 kDa protein of PS185FF.




SEQ ID NO:63 is a partial DNA sequence from PS185FF for the 44 kDa protein.




SEQ ID NO:64 is a partial amino acid sequence for the 44 kDa protein of PS185FF.




SEQ ID NO:65 is the DNA sequence from PS185GG which encodes the 14 kDa protein.




SEQ ID NO:66 is the amino acid sequence of the 14 kDa protein of PS185GG.




SEQ ID NO:67 is the DNA sequence from PS185GG for the 44 kDa protein.




SEQ ID NO:68 is the amino acid sequence for the 44 kDa protein of PS185GG.




SEQ ID NO:69 is the DNA sequence from PS185L12 which encodes the 14 kDa protein.




SEQ ID NO:70 is the amino acid sequence of the 14 kDa protein of PS185L12.




SEQ ID NO:71 is the DNA sequence from PS185W3 which encodes the 14 kDa protein.




SEQ ID NO:72 is the amino acid sequence of the 14 kDa protein of PS185W3.




SEQ ID NO:73 is the DNA sequence from PS186FF which encodes the 14 kDa protein.




SEQ ID NO:74 is the amino acid sequence of the 14 kDa protein of PS186FF.




SEQ ID NO:75 is the DNA sequence from PS187F3 which encodes the 14 kDa protein.




SEQ ID NO:76 is the amino acid sequence of the 14 kDa protein of PS187F3.




SEQ ID NO:77 is a partial DNA sequence from PS187F3 for the 44 kDa protein.




SEQ ID NO:78 is a partial amino acid sequence for the 44 kDa protein of PS187F3.




SEQ ID NO:79 is the DNA sequence from PS187G1 which encodes the 14 kDa protein.




SEQ ID NO:80 is the amino acid sequence of the 14 kDa protein of PS187G1.




SEQ ID NO:81 is a partial DNA sequence from PS187G1 for the 44 kDa protein.




SEQ ID NO:82 is a partial amino acid sequence for the 44 kDa protein of PS187G1.




SEQ ID NO:83 is the DNA sequence from PS187L14 which encodes the 14 kDa protein.




SEQ ID NO:84 is the amino acid sequence of the 14 kDa protein of PS187L14.




SEQ ID NO:85 is a partial DNA sequence from PS187L14 for the 44 kDa protein.




SEQ ID NO:86 is a partial amino acid sequence for the 44 kDa protein of PS187L14.




SEQ ID NO:87 is the DNA sequence from PS187Y2 which encodes the 14 kDa protein.




SEQ ID NO:88 is the amino acid sequence of the 14 kDa protein of PS187Y2.




SEQ ID NO:89 is a partial DNA sequence from PS187Y2 for the 44 kDa protein.




SEQ ID NO:90 is a partial amino acid sequence for the 44 kDa protein of PS187Y2.




SEQ ID NO:91 is the DNA sequence from PS201G which encodes the 14 kDa protein.




SEQ ID NO:92 is the amino acid sequence of the 14 kDa protein of PS201G.




SEQ ID NO:93 is the DNA sequence from PS201HH which encodes the 14 kDa protein.




SEQ ID NO:94 is the amino acid sequence of the 14 kDa protein of PS201HH.




SEQ ID NO:95 is the DNA sequence from PS201L3 which encodes the 14 kDa protein.




SEQ ID NO:96 is the amino acid sequence of the 14 kDa protein of PS201L3.




SEQ ID NO:97 is the DNA sequence from PS204C3 which encodes the 14 kDa protein.




SEQ ID NO:98 is the amino acid sequence of the 14 kDa protein of PS204C3.




SEQ ID NO:99 is the DNA sequence from PS204G4 which encodes the 14 kDa protein.




SEQ ID NO:100 is the amino acid sequence of the 14 kDa protein of PS204G4.




SEQ ID NO:101 is the DNA sequence from PS204I11 which encodes the 14 kDa protein.




SEQ ID NO:102 is the amino acid sequence of the 14 kDa protein of PS204I11.




SEQ ID NO:103 is the DNA sequence from PS204J7 which encodes the 14 kDa protein.




SEQ ID NO:104 is the amino acid sequence of the 14 kDa protein of PS204J7.




SEQ ID NO:105 is the DNA sequence from PS236B6 which encodes the 14 kDa protein.




SEQ ID NO:106 is the amino acid sequence of the 14 kDa protein of PS236B6.




SEQ ID NO:107 is the DNA sequence from PS242K10 which encodes the 14 kDa protein.




SEQ ID NO:108 is the amino acid sequence of the 14 kDa protein of PS242K10.




SEQ ID NO:109 is a partial DNA sequence from PS242K10 for the 44 kDa protein.




SEQ ID NO:110 is a partial amino acid sequence for the 44 kDa protein of PS242K10.




SEQ ID NO:111 is the DNA sequence from PS246P42 which encodes the 14 kDa protein.




SEQ ID NO:112 is the amino acid sequence of the 14 kDa protein of PS246P42.




SEQ ID NO:113 is the DNA sequence from PS69Q which encodes the 14 kDa protein.




SEQ ID NO:114 is the amino acid sequence of the 14 kDa protein of PS69Q.




SEQ ID NO:115 is the DNA sequence from PS69Q for the 44 kDa protein.




SEQ ID NO:116 is the amino acid sequence for the 44 kDa protein of PS69Q.




SEQ ID NO:117 is the DNA sequence from KB54 which encodes the 14 kDa protein.




SEQ ID NO:118 is the amino acid sequence of the 14 kDa protein of KB54.




SEQ ID NO:119 is the DNA sequence from KR1209 which encodes the 14 kDa protein.




SEQ ID NO:120 is the amino acid sequence of the 14 kDa protein of KR1209.




SEQ ID NO:121 is the DNA sequence from KR1369 which encodes the 14 kDa protein.




SEQ ID NO:122 is the amino acid sequence of the 14 kDa protein of KR1369.




SEQ ID NO:123 is the DNA sequence from KR589 which encodes the 14 kDa protein.




SEQ ID NO:124 is the amino acid sequence of the 14 kDa protein of KR589.




SEQ ID NO:125 is a partial DNA sequence from KR589 for the 44 kDa protein.




SEQ ID NO:126 is a partial amino acid sequence for the 44 kDa protein of KR589.




SEQ ID NO:127 is a polynucleotide sequence for a gene designated 149B1-15-PO, which is optimized for expression in


Zea mays


. This gene encodes an approximately 15 kDa toxin obtainable from PS149B1 that is disclosed in WO 97/40162.




SEQ ID NO:128 is a polynucleotide sequence for a gene designated 149B1-45-PO, which is optimized for expression in


Zea mays


. This gene encodes an approximately 45 kDa toxin obtainable from PS149B1 that is disclosed in WO 97/40162.




SEQ ID NO:129 is a polynucleotide sequence for a gene designated 80JJ1-15-PO7, which is optimized for expression in maize. This is an alternative gene that encodes an approximately 15 kDa toxin.




SEQ ID NO:130 is an amino acid sequence for a toxin encoded by the gene designated 80JJ1-15-PO7.




SEQ ID NO:131 is an oligonucleotide primer (15kfor1) used according to the subject invention (see Example 20).




SEQ ID NO:132 is an oligonucleotide primer (45krev6) used according to the subject invention (see Example 20).




SEQ ID NO:133 is the DNA sequence from PS201L3 which encodes the 14 kDa protein.




SEQ ID NO:134 is the amino acid sequence of the 14 kDa protein of PS201L3.




SEQ ID NO:135 is a partial DNA sequence from PS201L3 for the 44 kDa protein.




SEQ ID NO:136 is a partial amino acid sequence for the 44 kDa protein of PS201L3.




SEQ ID NO:137 is the DNA sequence from PS187G1 which encodes the 14 kDa protein.




SEQ ID NO:138 is the amino acid sequence of the 14 kDa protein of PS187G1.




SEQ ID NO:139 is the DNA sequence from PS187G1 which encodes the 44 kDa protein.




SEQ ID NO:140 is the amino acid sequence of the 44 kDa protein of PS187G1.




SEQ ID NO:141 is the DNA sequence from PS201HH2 which encodes the 14 kDa protein.




SEQ ID NO:142 is the amino acid sequence of the 14 kDa protein of PS201HH2.




SEQ ID NO:143 is a partial DNA sequence from PS201HH2 for the 44 kDa protein.




SEQ ID NO:144 is a partial amino acid sequence for the 44 kDa protein of PS201HH2.




SEQ ID NO:145 is the DNA sequence from KR1369 which encodes the 14 kDa protein.




SEQ ID NO:146 is the amino acid sequence of the 14 kDa protein of KR1369.




SEQ ID NO:147 is the DNA sequence from KR1369 which encodes the 44 kDa protein.




SEQ ID NO:148 is the amino acid sequence of the 44 kDa protein of KR1369.




SEQ ID NO:149 is the DNA sequence from PS137A which encodes the 14 kDa protein.




SEQ ID NO:150 is the amino acid sequence of the 14 kDa protein of PS137A.




SEQ ID NO:151 is the DNA sequence from PS201V2 which encodes the 14 kDa protein.




SEQ ID NO:152 is the amino acid sequence of the 14 kDa protein of PS201V2.




SEQ ID NO:153 is the DNA sequence from PS207C3 which encodes the 14 kDa protein.




SEQ ID NO:154 is the amino acid sequence of the 14 kDa protein of PS207C3.




SEQ ID NO:155 is an oligonucleotide primer (F1new) for use according to the subject invention (see Example 22).




SEQ ID NO:156 is an oligonucleotide primer (R1new) for use according to the subject invention (see Example 22).




SEQ ID NO:157 is an oligonucleotide primer (F2new) for use according to the subject invention (see Example 22).




SEQ ID NO:158 is an oligonucleotide primer (R2new) for use according to the subject invention (see Example 22).




SEQ ID NO:159 is an approximately 58 kDa fusion protein.




SEQ ID NO:160 is a fusion gene encoding the protein of SEQ ID NO:159.




SEQ ID NO:161 is primer 45 kD5′ for use according to the subject invention (see Example 27).




SEQ ID NO:162 is primer 45 kD3′rc for use according to the subject invention (see Example 27).




SEQ ID NO:163 is primer 45 kD5′01 for use according to the subject invention (see Example 27).




SEQ ID NO:164 is primer 45 kD5′02 for use according to the subject invention (see Example 27).




SEQ ID NO:165 is primer 45 kD3′03 for use according to the subject invention (see Example 27).




SEQ ID NO:166 is primer 45 kD3′04 for use according to the subject invention (see Example 27).




DETAILED DISCLOSURE OF THE INVENTION




The subject invention concerns two new classes of polynucleotide sequences as well as the novel pesticidal proteins encoded by these polynucleotides. In one embodiment, the proteins have a full-length molecular weight of approximately 40-50 kDa. In specific embodiments exemplified herein, these proteins have a molecular weight of about 43-47 kDa. In a second embodiment, the pesticidal proteins have a molecular weight of approximately 10-15 kDa. In specific embodiments exemplified herein, these proteins have a molecular weight of about 13-14 kDa.




In preferred embodiments, a 40-50 kDa protein and a 10-15 kDa protein are used together, and the proteins are pesticidal in combination. Thus, the two classes of proteins of the subject invention can be referred to as “binary toxins.” As used herein, the term “toxin” includes either class of pesticidal proteins. The subject invention concerns polynucleotides which encode either the 40-50 kDa or the 10-15 kDa toxins, polynucleotides which encode portions or fragments of the full length toxins that retain pesticidal activity when used in combination, and polynucleotide sequences which encode both types of toxins. In a preferred embodiment, these toxins are active against coleopteran pests, more preferably corn rootworn, and most preferably Western corn rootworm. Lepidopteran pests can also be targeted.




Certain specific toxins are exemplified herein. For toxins having a known amino acid sequence, the molecular weight is also known. Those skilled in the art will recognize that the apparent molecular weight of a protein as determined by gel electrophoresis will sometimes differ from the true molecular weight. Therefore, reference herein to, for example, a 45 kDa protein or a 14 kDa protein is understood to refer to proteins of approximately that size even if the true molecular weight is somewhat different.




The subject invention concerns not only the polynucleotides that encode these classes of toxins, but also the use of these polynucleotides to produce recombinant hosts which express the toxins. In a further aspect, the subject invention concerns the combined use of an approximately 40-50 kDa toxin of the subject invention together with an approximately 10-15 kDa toxin of the subject invention to achieve highly effective control of pests, including coleopterans such as corn rootworm. For example, the roots of one plant can express both types of toxins.




Thus, control of pests using the isolates, toxins, and genes of the subject invention can be accomplished by a variety of methods known to those skilled in the art. These methods include, for example, the application of


B.t


. isolates to the pests (or their location), the application of recombinant microbes to the pests (or their locations), and the transformation of plants with genes which encode the pesticidal toxins of the subject invention. Microbes for use according to the subject invention may be, for example,


B.t., E. coli


, and/or Pseudomonas. Recombinant hosts can be made by those skilled in the art using standard techniques. Materials necessary for these transformations are disclosed herein or are otherwise readily available to the skilled artisan. Control of insects and other pests such as nematodes and mites can also be accomplished by those skilled in the art using standard techniques combined with the teachings provided herein.




The new classes of toxins and polynucleotide sequences provided here are defined according to several parameters. One critical characteristic of the toxins described herein is pesticidal activity. In a specific embodiment, these toxins have activity against coleopteran pests. Anti-lepidopteran-active toxins are also embodied. The toxins and genes of the subject invention can be further defined by their amino acid and nucleotide sequences. The sequences of the molecules within each novel class can be identified and defined in terms of their similarity or identity to certain exemplified sequences as well as in terms of the ability to hybridize with, or be amplified by, certain exemplified probes and primers. The classes of toxins provided herein can also be identified based on their immunoreactivity with certain antibodies and based upon their adherence to a generic formula.




It should be apparent to a person skilled in this art that genes encoding pesticidal proteins according to the subject invention can be obtained through several means. The specific genes exemplified herein may be obtained from the isolates deposited at a culture depository as described herein. These genes, and toxins, of the subject invention can also be constructed synthetically, for example, by the use of a gene synthesizer.




The sequence of three exemplary 45 kDa toxins are provided as SEQ ID NOS:11, 43, and 38. In preferred embodiments, toxins of this class have a sequence which conforms to the generic sequence presented as SEQ ID NO:28. In preferred embodiments, the toxins of this class will conform to the consensus sequence shown in FIG.


1


.




With the teachings provided herein, one skilled in the art could readily produce and use the various toxins and polynucleotide sequences of the novel classes described herein.




Microorganisms useful according to the subject invention have been deposited in the permanent collection of the Agricultural Research Service Patent Culture Collection (NRRL), Northern Regional Research Center, 1815 North University Street, Peoria, Ill. 61604, USA. The culture repository numbers of the deposited strains are as follows:

















Culture




Repository No.




Deposit Date













B.t.


strain PS80JJ1




NRRL B-18679




July 17, 1990








B.t.


strain PS149B1




NRRL B-21553




March 28, 1996








B.t.


strain PS167H2




NRRL B-21554




March 28, 1996








E. coli


NM522(pMYC2365)




NRRL B-21170




Jan. 5, 1994








E. coli


NM522(pMYC2382)




NRRL B-21329




Sept. 28, 1994








E. coli


NM522(pMYC2379)




NRRL B-21155




Nov. 3, 1993








E. coli


NM522(pMYC2421)




NRRL B-21555




March 28, 1996








E. coli


NM522(pMYC2427)




NRRL B-21672




March 26, 1997








E. coli


NM522(pMYC2429)




NRRL B-21673




March 26, 1997








E. coli


NM522(pMYC2426)




NRRL B-21671




March 26, 1997








B.t.


strain PS185GG




NRRL B-30175




Aug. 19, 1999








B.t.


strain PS187G1




NRRL B-30185




Aug. 19, 1999








B.t.


strain PS187Y2




NRRL B-30187




Aug. 19, 1999








B.t.


strain PS201G




NRRL B-30188




Aug. 19, 1999








B.t.


strain PS201HH2




NRRL B-30190




Aug. 19, 1999








B.t.


strain PS242K10




NRRL B-30195




Aug. 19, 1999








B.t.


strain PS69Q




NRRL B-30175




Aug. 19, 1999








B.t.


strain KB54A1-6




NRRL B-30197




Aug. 19, 1999








B.t.


strain KR589




NRRL B-30198




Aug. 19, 1999








B.t.


strain PS185L12




NRRL B-30179




Aug. 19, 1999








B.t.


strain PS185W3




NRRL B-30180




Aug. 19, 1999








B.t.


strain PS187L14




NRRL B-30186




Aug. 19, 1999








B.t.


strain PS186FF




NRRL B-30182




Aug. 19, 1999








B.t.


strain PS131W2




NRRL B-30176




Aug. 19, 1999








B.t.


strain PS158T3




NRRL B-30177




Aug. 19, 1999








B.t.


strain PS158X10




NRRL B-30178




Aug. 19, 1999








B.t.


strain PS185FF




NRRL B-30182




Aug. 19, 1999








B.t.


strain PS187F3




NRRL B-30184




Aug. 19, 1999








B.t.


strain PS201L3




NRRL B-30189




Aug. 19, 1999








B.t.


strain PS204C3




NRRL B-30191




Aug. 19, 1999








B.t.


strain PS204G4




NRRL B-18685




July 17, 1990








B.t.


strain PS204I11




NRRL B-30192




Aug. 19, 1999








B.t.


strain PS204J7




NRRL B-30193




Aug. 19, 1999








B.t.


strain PS236B6




NRRL B-30194




Aug. 19, 1999








B.t.


strain PS246P42




NRRL B-30196




Aug. 19, 1999








B.t.


strain KR1209




NRRL B-30199




Aug. 19, 1999








B.t.


strain KR1369




NRRL B-30200




Aug. 19, 1999








B.t.


strain MR1506




NRRL B-30298




June 1, 2000








B.t.


strain MR1509




NRRL B-30330




Aug. 8, 2000








B.t.


strain MR1510




NRRL B-30331




Aug. 8, 2000








P.f.


strain MR1607




NRRL B-30332




Aug. 8, 2000














The PS80JJ1 isolate is available to the public by virtue of the issuance of U.S. Pat. No. 5,151,363 and other patents.




A further aspect of the subject invention concerns novel isolates and the toxins and genes obtainable from these isolates. Novel isolates have been deposited and are included in the above list. These isolates have been deposited under conditions that assure that access to the cultures will be available during the pendency of this patent application to one determined by the Commissioner of Patents and Trademarks to be entitled thereto under 37 CFR 1.14 and 35 U.S.C. 122. The deposits are available as required by foreign patent laws in countries wherein counterparts of the subject application, or its progeny, are filed. However, it should be understood that the availability of a deposit does not constitute a license to practice the subject invention in derogation of patent rights granted by governmental action.




Further, the subject culture deposits will be stored and made available to the public in accord with the provisions of the Budapest Treaty for the Deposit of Microorganisms, i.e., they will be stored with all the care necessary to keep them viable and uncontaminated for a period of at least five years after the most recent request for the furnishing of a sample of a deposit, and in any case, for a period of at least 30 (thirty) years after the date of deposit or for the enforceable life of any patent which may issue disclosing the cultures. The depositor acknowledges the duty to replace the deposit(s) should the depository be unable to furnish a sample when requested, due to the condition of the deposit(s). All restrictions on the availability to the public of the subject culture deposits will be irrevocably removed upon the granting of a patent disclosing them.




Following is a table which provides characteristics of certain


B.t


. isolates that are useful according to the subject invention.












TABLE 1











Description of


B.t.


strains toxic to coleopterans

















Crystal











Descrip-




Approx.




Sero-




NRRL




Deposit






Culture




tion




MW (kDa)




type




Deposit




Date









PS80JJ1




multiple




130, 90, 47,




4a4b,




B-




July 17, 1990







attached




37, 14




sotto




18679






PS149B1





130, 47, 14





B-




March 28, 1996










21553






PS167H2





70, 47, 14





B-




March 28, 1996










23554














Other isolates of the subject invention can also be characterized in terms of the shape and location of toxin inclusions.




Toxins, genes, and probes. The polynucleotides of the subject invention can be used to form complete “genes” to encode proteins or peptides in a desired host cell. For example, as the skilled artisan would readily recognize, some of the polynucleotides in the attached sequence listing are shown without stop codons. Also, the subject polynucleotides can be appropriately placed under the control of a promoter in a host of interest, as is readily known in the art.




As the skilled artisan would readily recognize, DNA typically exists in a double-stranded form. In this arrangement, one strand is complementary to the other strand and vice versa. As DNA is replicated in a plant (for example) additional, complementary strands of DNA are produced. The “coding strand” is often used in the art to refer to the strand that binds with the anti-sense strand. The mRNA is transcribed from the “anti-sense” strand of DNA. The “sense” or “coding” strand has a series of codons (a codon is three nucleotides that can be read three-at-a-time to yield a particular amino acid) that can be read as an open reading frame (ORF) to form a protein or peptide of interest. In order to express a protein in vivo, a strand of DNA is typically transcribed into a complementary strand of mRNA which is used as the template for the protein. Thus, the subject invention includes the use of the exemplified polynucleotides shown in the attached sequence listing and/or the complementary strands. RNA and PNA (peptide nucleic acids) that are functionally equivalent to the exemplified DNA are included in the subject invention.




Toxins and genes of the subject invention can be identified and obtained by using oligonucleotide probes, for example. These probes are detectable nucleotide sequences which may be detectable by virtue of an appropriate label or may be made inherently fluorescent as described in International Application No. WO 93/16094. The probes (and the polynucleotides of the subject invention) may be DNA, RNA, or PNA. In addition to adenine (A), cytosine (C), guanine (G), thymine (T), and uracil (U; for RNA molecules), synthetic probes (and polynucleotides) of the subject invention can also have inosine (a neutral base capable of pairing with all four bases; sometimes used in place of a mixture of all four bases in synthetic probes). Thus, where a synthetic, degenerate oligonucleotide is referred to herein, and “n” is used generically, “n” can be G, A, T, C, or inosine. Ambiguity codes as used herein are in accordance with standard IUPAC naming conventions as of the filing of the subject application (for example, R means A or G, Y means C or T, etc.) As is well known in the art, if the probe molecule and nucleic acid sample hybridize by forming a strong bond between the two molecules, it can be reasonably assumed that the probe and sample have substantial homology/similarity/identity. Preferably, hybridization is conducted under stringent conditions by techniques well-known in the art, as described in, for example, Keller, G. H., M. M. Manak (1987)


DNA Probes


, Stockton Press, New York, N.Y., pp. 169-170. For example, as stated therein, high stringency conditions can be achieved by first washing with 2×SSC (Standard Saline Citrate)/0.1% SDS (Sodium Dodecyl Sulfate) for 15 minutes at room temperature. Two washes are typically performed. Higher stringency can then be achieved by lowering the salt concentration and/or by raising the temperature. For example, the wash described above can be followed by two washings with 0.1×SSC/0.1% SDS for 15 minutes each at room temperature followed by subsequent washes with 0.1×SSC/0.1% SDS for 30 minutes each at 55° C. These temperatures can be used with other hybridization and wash protocols set forth herein and as would be known to one skilled in the art (SSPE can be used as the salt instead of SSC, for example). The 2×SSC/0.1% SDS can be prepared by adding 50 ml of 20×SSC and 5 ml of 10% SDS to 445 ml of water. 20×SSC can be prepared by combining NaCl (175.3 g/0.150 M), sodium citrate (88.2 g/0.015 M), and water to 1 liter, followed by adjusting pH to 7.0 with 10 N NaOH. 10% SDS can be prepared by dissolving 10 g of SDS in 50 ml of autoclaved water, diluting to 100 ml, and aliquotting.




Detection of the probe provides a means for determining in a known manner whether hybridization has occurred. Such a probe analysis provides a rapid method for identifying toxin-encoding genes of the subject invention. The nucleotide segments which are used as probes according to the invention can be synthesized using a DNA synthesizer and standard procedures. These nucleotide sequences can also be used as PCR primers to amplify genes of the subject invention.




Hybridization characteristics of a molecule can be used to define polynucleotides of the subject invention. Thus the subject invention includes polynucleotides (and/or their complements, preferably their full complements) that hybridize with a polynucleotide exemplified herein (such as the DNA sequences included in SEQ ID NOs:46-166).




As used herein “stringent” conditions for hybridization refers to conditions which achieve the same, or about the same, degree of specificity of hybridization as the conditions employed by the current applicants. Specifically, hybridization of immobilized DNA on Southern blots with


32


P-labeled gene-specific probes was performed by standard methods (Maniatis, T., E. F. Fritsch, J. Sambrook [1982


] Molecular Cloning: A Laboratory Manual


, Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.). In general, hybridization and subsequent washes were carried out under stringent conditions that allowed for detection of target sequences (with homology to the PS80JJ1 toxin genes, for example). For double-stranded DNA gene probes, hybridization was carried out overnight at 20-25° C. below the melting temperature (Tm) of the DNA hybrid in 6×SSPE, 5×Denhardt's solution, 0.1% SDS, 0.1 mg/ml denatured DNA. The melting temperature is described by the following formula (Beltz, G. A., K. A. Jacobs, T. H. Eickbush, P. T. Cherbas, and F. C. Kafatos [1983


] Methods of Enzymology


, R. Wu, L. Grossman and K. Moldave [eds.] Academic Press, New York 100:266-285):




 Tm=81.5° C.+16.6 Log[Na+]+0.41(%G+C)−0.61(%formamide)−600/length of duplex in base pairs.




Washes are typically carried out as follows:




(1) Twice at room temperature for 15 minutes in 1×SSPE, 0.1% SDS (low stringency wash).




(2) Once at Tm−20° C. for 15 minutes in 0.2×SSPE, 0.1% SDS (moderate stringency wash).




For oligonucleotide probes, hybridization was carried out overnight at 10-20° C. below the melting temperature (Tm) of the hybrid in 6×SSPE, 5×Denhardt's solution, 0.1% SDS, 0.1 mg/ml denatured DNA. Tm for oligonucleotide probes was determined by the following formula:






Tm(° C.)=2(number T/A base pairs)+4(number G/C base pairs)






(Suggs, S. V., T. Miyake, E. H. Kawashime, M. J. Johnson, K. Itakura, and R. B. Wallace [1981


] ICN-UCLA Symp. Dev. Biol. Using Purified Genes


, D. D. Brown [ed.], Academic Press, New York, 23:683-693).




Washes were typically carried out as follows:




(1) Twice at room temperature for 15 minutes 1×SSPE, 0.1% SDS (low stringency wash).




(2) Once at the hybridization temperature for 15 minutes in 1×SSPE, 0.1% SDS (moderate stringency wash).




Toxins obtainable from isolates PS149B1, PS167H2, and PS80JJ1 have been characterized as having have at least one of the following characteristics (novel toxins of the subject invention can be similarly characterized with this and other identifying information set forth herein):




(a) said toxin is encoded by a nucleotide sequence which hybridizes under stringent conditions with a nucleotide sequence selected from the group consisting of: DNA which encodes SEQ ID NO:2, DNA which encodes SEQ ID NO:4, DNA which encodes SEQ ID NO:6, SEQ ID NO:8, SEQ ID NO:10, DNA which encodes SEQ ID NO:11, SEQ ID NO:12, DNA which encodes SEQ ID NO:13, SEQ ID NO:14, DNA which encodes SEQ ID NO:15, DNA which encodes SEQ ID NO:16, DNA which encodes SEQ ID NO:17, DNA which encodes SEQ ID NO:18, DNA which encodes SEQ ID NO:19, SEQ ID NO:20, SEQ ID NO:21, SEQ ID NO:22, SEQ ID NO:23, SEQ ID NO:24, SEQ ID NO:25, SEQ ID NO:26, SEQ ID NO:27, DNA which encodes a pesticidal portion of SEQ ID NO:28, SEQ ID NO:37, DNA which encodes SEQ ID NO:38, SEQ ID NO:42, and DNA which encodes SEQ ID NO:43;




(b) said toxin immunoreacts with an antibody to an approximately 40-50 kDa pesticidal toxin, or a fragment thereof, from a


Bacillus thuringiensis


isolate selected from the group consisting of PS80JJ1 having the identifying characteristics of NRRL B-18679, PS149B1 having the identifying characteristics of NRRL B-21553, and PS167H2 having the identifying characteristics of NRRL B-21554;




(c) said toxin is encoded by a nucleotide sequence wherein a portion of said nucleotide sequence can be amplified by PCR using a primer pair selected from the group consisting of SEQ ID NOs:20 and 24 to produce a fragment of about 495 bp, SEQ ID NOs:20 and 25 to produce a fragment of about 594 bp, SEQ ID NOs:21 and 24 to produce a fragment of about 471 bp, and SEQ ID NOs:21 and 25 to produce a fragment of about 580 bp;




(d) said toxin comprises a pesticidal portion of the amino acid sequence shown in SEQ ID NO:28;




(e) said toxin comprises an amino acid sequence which has at least about 60% homology with a pesticidal portion of an amino acid sequence selected from the group consisting of SEQ ID NO:11, SEQ ID NO:13, SEQ ID NO:15, SEQ ID NO:38, and SEQ ID NO:43;




(f) said toxin is encoded by a nucleotide sequence which hybridizes under stringent conditions with a nucleotide sequence selected from the group consisting of DNA which encodes SEQ ID NO:3, DNA which encodes SEQ ID NO:5, DNA which encodes SEQ ID NO:7, DNA which encodes SEQ ID NO:32, DNA which encodes SEQ ID NO:36, and DNA which encodes SEQ ID NO:41;




(g) said toxin immunoreacts with an antibody to an approximately 10-15 kDa pesticidal toxin, or a fragment thereof, from a


Bacillus thuringiensis


isolate selected from the group consisting of PS80JJ1 having the identifying characteristics of NRRL B-18679, PS149B1 having the identifying characteristics of NRRL B-21553, and PS167H2 having the identifying characteristics of NRRL B-21554;




(h) said toxin is encoded by a nucleotide sequence wherein a portion of said nucleotide sequence can be amplified by PCR using the primer pair of SEQ ID NO:29 and SEQ ID NO:33; and




(i) said toxin comprises an amino acid sequence which has at least about 60% homology with an amino acid sequence selected from the group consisting of SEQ ID NO:3, SEQ ID NO:5, SEQ ID NO:7, pesticidal portions of SEQ ID NO:32, pesticidal portions of SEQ ID NO:36, and pesticidal portions of SEQ ID NO:41.




Modification of genes and toxins. The genes and toxins useful according to the subject invention include not only the specifically exemplified full-length sequences, but also portions and/or fragments (including internal and/or terminal deletions compared to the full-length molecules) of these sequences, variants, mutants, chimerics, and fusions thereof. Proteins of the subject invention can have substituted amino acids so long as they retain the characteristic pesticidal activity of the proteins specifically exemplified herein. “Variant” genes have nucleotide sequences which encode the same toxins or which encode toxins having pesticidal activity equivalent to an exemplified protein. As used herein, the term “equivalent toxins” refers to toxins having the same or essentially the same biological activity against the target pests as the exemplified toxins. As used herein, reference to “essentially the same” sequence refers to sequences which have amino acid substitutions, deletions, additions, or insertions which do not materially affect pesticidal activity. Fragments retaining pesticidal activity are also included in this definition. Fragments and equivalents which retain the pesticidal activity of the exemplified toxins would be within the scope of the subject invention.




Equivalent toxins and/or genes encoding these equivalent toxins can be derived from wild-type or recombinant


B.t


. isolates and/or from other wild-type or recombinant organisms using the teachings provided herein. Other Bacillus species, for example, can be used as source isolates.




Variations of genes may be readily constructed using standard techniques for making point mutations, for example. Also, U.S. Pat. No. 5,605,793, for example, describes methods for generating additional molecular diversity by using DNA reassembly after random fragmentation. Variant genes can be used to produce variant proteins; recombinant hosts can be used to produce the variant proteins. Fragments of full-length genes can be made using commercially available exonucleases or endonucleases according to standard procedures. For example, enzymes such as Bal31 or site-directed mutagenesis can be used to systematically cut off nucleotides from the ends of these genes. Also, genes which encode active fragments may be obtained using a variety of restriction enzymes. Proteases may be used to directly obtain active fragments of these toxins.




There are a number of methods for obtaining the pesticidal toxins of the instant invention. For example, antibodies to the pesticidal toxins disclosed and claimed herein can be used to identify and isolate other toxins from a mixture of proteins. Specifically, antibodies may be raised to the portions of the toxins which are most constant and most distinct from other


B.t


. toxins. These antibodies can then be used to specifically identify equivalent toxins with the characteristic activity by immunoprecipitation, enzyme linked immunosorbent assay (ELISA), or western blotting. Antibodies to the toxins disclosed herein, or to equivalent toxins, or to fragments of these toxins, can readily be prepared using standard procedures. The genes which encode these toxins can then be obtained from the source microorganism.




Because of the redundancy of the genetic code, a variety of different DNA sequences can encode the amino acid sequences disclosed herein. It is well within the skill of a person trained in the art to create these alternative DNA sequences encoding the same, or essentially the same, toxins. These variant DNA sequences are within the scope of the subject invention.




Certain toxins of the subject invention have been specifically exemplified herein. Since these toxins are merely exemplary of the toxins of the subject invention, it should be readily apparent that the subject invention comprises variant or equivalent toxins (and nucleotide sequences coding for equivalent toxins) having the same or similar pesticidal activity of the exemplified toxin. Equivalent toxins will have amino acid similarity (and/or homology) with an exemplified toxin. The amino acid identity will typically be greater than 60%, preferably greater than 75%, more preferably greater than 80%, even more preferably greater than 90%, and can be greater than 95%. Preferred polynucleotides and proteins of the subject invention can also be defined in terms of more particular identity and/or similarity ranges. For example, the identity and/or similarity can be 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, or 99% as compared to a sequence exemplified herein. Unless otherwise specified, as used herein percent sequence identity and/or similarity of two nucleic acids is determined using the algorithm of Karlin and Altschul (1990),


Proc. Natl. Acad. Sci. USA


87:2264-2268, modified as in Karlin and Altschul (1993),


Proc. Natl. Acad. Sci. USA


90:5873-5877. Such an algorithm is incorporated into the NBLAST and XBLAST programs of Altschul et al. (1990),


J. Mol. Biol


. 215:402-410. BLAST nucleotide searches are performed with the NBLAST program, score=100, wordlength=12, to obtain nucleotide sequences with the desired percent sequence identity. To obtain gapped alignments for comparison purposes, Gapped BLAST is used as described in Altschul et al. (1997),


Nucl. Acids Res


. 25:3389-3402. When utilizing BLAST and Gapped BLAST programs, the default parameters of the respective programs (NBLAST and XBLAST) are used. See http://www.ncbi.nih.gov. The scores can also be calculated using the methods and algorithms of Crickmore et al. as described in the Background section, above.




The amino acid homology will be highest in critical regions of the toxin which account for biological activity or are involved in the determination of three-dimensional configuration which ultimately is responsible for the biological activity. In this regard, certain amino acid substitutions are acceptable and can be expected if these substitutions are in regions which are not critical to activity or are conservative amino acid substitutions which do not affect the three-dimensional configuration of the molecule. For example, amino acids may be placed in the following classes: non-polar, uncharged polar, basic, and acidic. Conservative substitutions whereby an amino acid of one class is replaced with another amino acid of the same type fall within the scope of the subject invention so long as the substitution does not materially alter the biological activity of the compound. Table 2 provides a listing of examples of amino acids belonging to each class.















TABLE 2











Class of Amino Acid




Examples of Amino Acids













Nonpolar




Ala, Val, Leu, Ile, Pro, Met, Phe, Trp







Uncharged Polar




Gly, Ser, Thr, Cys, Tyr, Asn, Gln







Acidic




Asp, Glu







Basic




Lys, Arg, His















In some instances, non-conservative substitutions can also be made. The critical factor is that these substitutions must not significantly detract from the biological activity of the toxin.




As used herein, reference to “isolated” polynucleotides and/or “purified” toxins refers to these molecules when they are not associated with the other molecules with which they would be found in nature; these terms would include their use in plants. Thus, reference to “isolated” and/or “purified” signifies the involvement of the “hand of man” as described herein.




Synthetic genes which are functionally equivalent to the toxins of the subject invention can also be used to transform hosts. Methods for the production of synthetic genes can be found in, for example, U.S. Pat. No. 5,380,831.




Transgenic hosts. The toxin-encoding genes of the subject invention can be introduced into a wide variety of microbial or plant hosts. In preferred embodiments, expression of the toxin gene results, directly or indirectly, in the intracellular production and maintenance of the pesticide proteins. When transgenic/recombinant/transformed host cells are ingested by the pests, the pests will ingest the toxin. This is the preferred manner in which to cause contact of the pest with the toxin. The result is a control (killing or making sick) of the pest. Alternatively, suitable microbial hosts, e.g.; Pseudomonas such as


P. fluorescens


, can be applied to the situs of the pest, where some of which can proliferate, and are ingested by the target pests. The microbe hosting the toxin gene can be treated under conditions that prolong the activity of the toxin and stabilize the cell. The treated cell, which retains the toxic activity, then can be applied to the environment of the target pest.




In preferred embodiments, recombinant plant cells and plants are used. Preferred plants (and plant cells) are corn and/or maize.




Where the


B.t


. toxin gene is introduced via a suitable vector into a microbial host, and said host is applied to the environment in a living state, certain host microbes should be used. Microorganism hosts are selected which are known to occupy the “phytosphere” (phylloplane, phyllosphere, rhizosphere, and/or rhizoplane) of one or more crops of interest. These microorganisms are selected so as to be capable of successfully competing in the particular environment (crop and other insect habitats) with the wild-type microorganisms, provide for stable maintenance and expression of the gene expressing the polypeptide pesticide, and, desirably, provide for improved protection of the pesticide from environmental degradation and inactivation.




A large number of microorganisms are known to inhabit the phylloplane (the surface of the plant leaves) and/or the rhizosphere (the soil surrounding plant roots) of a wide variety of important crops. These microorganisms include bacteria, algae, and fungi. Of particular interest are microorganisms, such as bacteria, e.g., genera Pseudomonas, Erwinia, Serratia, Klebsiella, Xanthomonas, Streptomyces, Rhizobium, Rhodopseudomonas, Methylophilius, Agrobacterium, Acetobacter, Lactobacillus, Arthrobacter, Azotobacter, Leuconostoc, and Alcaligenes; fungi, particularly yeast, e.g., genera Saccharomyces, Cryptococcus, Kluyveromyces, Sporobolomyces, Rhodotorula, and Aureobasidium. Of particular interest are such phytosphere bacterial species as


Pseudomonas syringae, Pseudomonas fluorescens, Serratia marcescens, Acetobacter xylinum, Agrobacterium tumefaciens, Rhodopseudomonas spheroides, Xanthomonas campestris, Rhizobium melioti, Alcaligenes entrophus


, and


Azotobacter vinlandii


; and phytosphere yeast species such as


Rhodotorula rubra, R. glutinis, R. marina, R. aurantiaca, Cryptococcus albidus, C. diffluens, C. laurentii, Saccharomyces rosei, S. pretoriensis, S. cerevisiae, Sporobolomyces roseus, S. odorus, Kluyveromyces veronae


, and


Aureobasidium pollulans


. Of particular interest are the pigmented microorganisms.




A wide variety of ways are available for introducing a


B.t


. gene encoding a toxin into the target host under conditions which allow for stable maintenance and expression of the gene. These methods are well known to those skilled in the art and are described, for example, in U.S. Pat. No. 5,135,867, which is incorporated herein by reference.




Treatment of cells. As mentioned above,


B.t


. or recombinant cells expressing a


B.t


. toxin can be treated to prolong the toxin activity and stabilize the cell. The pesticide microcapsule that is formed comprises the


B.t


. toxin within a cellular structure that has been stabilized and will protect the toxin when the microcapsule is applied to the environment of the target pest. Suitable host cells may include either prokaryotes or eukaryotes, normally being limited to those cells which do not produce substances toxic to higher organisms, such as mammals. However, organisms which produce substances toxic to higher organisms could be used, where the toxic substances are unstable or the level of application sufficiently low as to avoid any possibility of toxicity to a mammalian host. As hosts, of particular interest will be the prokaryotes and the lower eukaryotes, such as fungi.




The cell will usually be intact and be substantially in the proliferative form when treated, rather than in a spore form, although in some instances spores may be employed.




Treatment of the microbial cell, e.g., a microbe containing the


B.t


. toxin gene, can be by chemical or physical means, or by a combination of chemical and/or physical means, so long as the technique does not deleteriously affect the properties of the toxin, nor diminish the cellular capability of protecting the toxin. Examples of chemical reagents are halogenating agents, particularly halogens of atomic no. 17-80. More particularly, iodine can be used under mild conditions and for sufficient time to achieve the desired results. Other suitable techniques include treatment with aldehydes, such as glutaraldehyde; anti-infectives, such as zephiran chloride and cetylpyridinium chloride; alcohols, such as isopropyl and ethanol; various histologic fixatives, such as Lugol iodine, Bouin's fixative, various acids and Helly's fixative (See: Humason, Gretchen L.,


Animal Tissue Techniques


, W. H. Freeman and Company, 1967); or a combination of physical (heat) and chemical agents that preserve and prolong the activity of the toxin produced in the cell when the cell is administered to the host environment. Examples of physical means are short wavelength radiation such as gamma-radiation and X-radiation, freezing, UV irradiation, lyophilization, and the like. Methods for treatment of microbial cells are disclosed in U.S. Pat. Nos. 4,695,455 and 4,695,462, which are incorporated herein by reference.




The cells generally will have enhanced structural stability which will enhance resistance to environmental conditions. Where the pesticide is in a proform, the method of cell treatment should be selected so as not to inhibit processing of the proform to the mature form of the pesticide by the target pest pathogen. For example, formaldehyde will crosslink proteins and could inhibit processing of the proform of a polypeptide pesticide. The method of treatment should retain at least a substantial portion of the bio-availability or bioactivity of the toxin.




Characteristics of particular interest in selecting a host cell for purposes of production include ease of introducing the


B.t


. gene into the host, availability of expression systems, efficiency of expression, stability of the pesticide in the host, and the presence of auxiliary genetic capabilities. Characteristics of interest for use as a pesticide microcapsule include protective qualities for the pesticide, such as thick cell walls, pigmentation, and intracellular packaging or formation of inclusion bodies; survival in aqueous environments; lack of mammalian toxicity; attractiveness to pests for ingestion; ease of killing and fixing without damage to the toxin; and the like. Other considerations include ease of formulation and handling, economics, storage stability, and the like.




Growth of cells. The cellular host containing the


B.t


. insecticidal gene may be grown in any convenient nutrient medium, preferably where the DNA construct provides a selective advantage, providing for a selective medium so that substantially all or all of the cells retain the


B.t


. gene. These cells may then be harvested in accordance with conventional ways. Alternatively, the cells can be treated prior to harvesting.




The


B.t


. cells of the invention can be cultured using standard art media and fermentation techniques. Upon completion of the fermentation cycle the bacteria can be harvested by first separating the


B.t


. spores and crystals from the fermentation broth by means well known in the art. The recovered


B.t


. spores and crystals can be formulated into a wettable powder, liquid concentrate, granules or other formulations by the addition of surfactants, dispersants, inert carriers, and other components to facilitate handling and application for particular target pests. These formulations and application procedures are all well known in the art.




Formulations. Formulated bait granules containing an attractant and spores and crystals of the


B.t


. isolates, or recombinant microbes comprising the genes obtainable from the


B.t


. isolates disclosed herein, can be applied to the soil. Formulated product can also be applied as a seed-coating or root treatment or total plant treatment at later stages of the crop cycle. Plant and soil treatments of


B.t


. cells may be employed as wettable powders, granules or dusts, by mixing with various inert materials, such as inorganic minerals (phyllosilicates, carbonates, sulfates, phosphates, and the like) or botanical materials (powdered corncobs, rice hulls, walnut shells, and the like). The formulations may include spreader-sticker adjuvants, stabilizing agents, other pesticidal additives, or surfactants. Liquid formulations may be aqueous-based or non-aqueous and employed as foams, gels, suspensions, emulsifiable concentrates, or the like. The ingredients may include rheological agents, surfactants, emulsifiers, dispersants, or polymers.




As would be appreciated by a person skilled in the art, the pesticidal concentration will vary widely depending upon the nature of the particular formulation, particularly whether it is a concentrate or to be used directly. The pesticide will be present in at least 1% by weight and may be 100% by weight. The dry formulations will have from about 1-95% by weight of the pesticide while the liquid formulations will generally be from about 1-60% by weight of the solids in the liquid phase. The formulations will generally have from about 10


2


to about 10


4


cells/mg. These formulations will be administered at about 50 mg (liquid or dry) to 1 kg or more per hectare.




The formulations can be applied to the environment of the pest, e.g., soil and foliage, by spraying, dusting, sprinkling, or the like.




Mutants. Mutants of the isolates of the invention can be made by procedures well known in the art. For example, an asporogenous mutant can be obtained through ethylmethane sulfonate (EMS) mutagenesis of an isolate. The mutants can be made using ultraviolet light and nitrosoguanidine by procedures well known in the art.




A smaller percentage of the asporogenous mutants will remain intact and not lyse for extended fermentation periods; these strains are designated lysis minus (−). Lysis minus strains can be identified by screening asporogenous mutants in shake flask media and selecting those mutants that are still intact and contain toxin crystals at the end of the fermentation. Lysis minus strains are suitable for a cell treatment process that will yield a protected, encapsulated toxin protein.




To prepare a phage resistant variant of said asporogenous mutant, an aliquot of the phage lysate is spread onto nutrient agar and allowed to dry. An aliquot of the phage sensitive bacterial strain is then plated directly over the dried lysate and allowed to dry. The plates are incubated at 30° C. The plates are incubated for 2 days and, at that time, numerous colonies could be seen growing on the agar. Some of these colonies are picked and subcultured onto nutrient agar plates. These apparent resistant cultures are tested for resistance by cross streaking with the phage lysate. A line of the phage lysate is streaked on the plate and allowed to dry. The presumptive resistant cultures are then streaked across the phage line. Resistant bacterial cultures show no lysis anywhere in the streak across the phage line after overnight incubation at 30° C. The resistance to phage is then reconfirmed by plating a lawn of the resistant culture onto a nutrient agar plate. The sensitive strain is also plated in the same manner to serve as the positive control. After drying, a drop of the phage lysate is placed in the center of the plate and allowed to dry. Resistant cultures showed no lysis in the area where the phage lysate has been placed after incubation at 30° C. for 24 hours.




Following are examples which illustrate procedures for practicing the invention. These examples should not be construed as limiting. All percentages are by weight and all solvent mixture proportions are by volume unless otherwise noted.




EXAMPLE 1




Culturing of


B.t


. Isolates of the Invention




A subculture of the


B.t


. isolates, or mutants thereof, can be used to inoculate the following medium, a peptone, glucose, salts medium.






















Bacto Peptone




7.5




g/l







Glucose




1.0




g/l







KH


2


PO


4






3.4




g/l







K


2


HPO


4






4.35




g/l







Salt Solution




5.0




ml/l







CaCl


2


Solution




5.0




ml/l







pH




7.2







Salts Solution (100 ml)







MgSO


4


.7 H


2


O




2.46




g







MnSO


4


.H


2


O




0.04




g







ZnSO


4


.7 H


2


O




0.28




g







FeSO


4


.7 H


2


O




0.40




g







CaCl


2


Solution (100 ml)







CaCl


2


.2 H


2


O




3.66




g















The salts solution and CaCl


2


solution are filter-sterilized and added to the autoclaved and cooked broth at the time of inoculation. Flasks are incubated at 30° C. on a rotary shaker at 200 rpm for 64 hr.




The above procedure can be readily scaled up to large fermentors by procedures well known in the art.




The


B.t


. spores and/or crystals, obtained in the above fermentation, can be isolated by procedures well known in the art. A frequently-used procedure is to subject the harvested fermentation broth to separation techniques, e.g., centrifugation.




EXAMPLE 2




Activity of Sporulated


Bacillus thuringiensis


Cultures on Corn Rootworm




Liquid cultures of PS80JJ1, PS149B1 or PS167H2 were grown to sporulation in shake flasks and pelleted by centrifugation. Culture pellets were resuspended in water and assayed for activity against corn rootworm in top load bioassays as described above. The amounts of 14 kDa and 44.3 kDa proteins present in the culture pellets were estimated by densitometry and used to calculate specific activity expressed as LC


50


. Activity of each native


B. thuringiensis


strain is presented in Table 3 (WCRW top load bioassay of


B.t


. strains).












TABLE 3











WCRW Top Load Bioassay of


B.t.


Strains


















B.t.


strain




LC


50


(μg/cm


2


)*




95% CL




Slope











PS80JJ1




6 




4-8




1.5







PS167H2




6 




4-9




1.6







PS149B1




8 




 4-12




1.8







CryB cell blank




4%




N/A




N/A







Water blank




4%




N/A




N/A













*Percentage mortality at top dose is provided for controls













EXAMPLE 3




Protein Purification for 45 kDa 80JJ1 Protein




One gram of lyophilized powder of 80JJ1 was suspended in 40 ml of buffer containing 80 mM Tris-Cl pH 7.8, 5 mM EDTA, 100 μM PMSF, 0.5 μg/ml Leupeptin, 0.7 μg/ml Pepstatin, and 40 μg/ml Bestatin. The suspension was centrifuged, and the resulting supernatant was discarded. The pellet was washed five times using 35-40 ml of the above buffer for each wash. The washed pellet was resuspended in 10 ml of 40% NaBr, 5 mM EDTA, 100 μM PMSF, 0.5 μg/ml Leupeptin, 0.7 μg/ml Pepstatin, and 40 μg/ml Bestatin and placed on a rocker platform for 75 minutes. The NaBr suspension was centrifuged, the supernatant was removed, and the pellet was treated a second time with 40% NaBr, 5 mM EDTA, 100 μM PMSF, 0.5 μg/ml Leupeptin, 0.7 μg/ml Pepstatin, and 40 μg/ml Bestatin as above. The supernatants (40% NaBr soluble) were combined and dialyzed against 10 mM CAPS pH 10.0, 1 mM EDTA at 4° C. The dialyzed extracts were centrifuged and the resulting supernatant was removed. The pellet (40% NaBr dialysis pellet) was suspended in 5 ml of H


2


O and centrifuged. The resultant supernatant was removed and discarded. The washed pellet was washed a second time in 10 ml of H


2


O and centrifuged as above. The washed pellet was suspended in 1.5 ml of H


2


O and contained primarily three protein bands with apparent mobilities of approximately 47 kDa, 45 kDa, and 15 kDa when analyzed using SDS-PAGE. At this stage of purification, the suspended 40% NaBr dialysis pellet contained approximately 21 mg/ml of protein by Lowry assay.




The proteins in the pellet suspension were separated using SDS-PAGE (Laemlli, U. K. [1970


] Nature


227:680) in 15% acrylamide gels. The separated proteins were then electrophoretically blotted to a PVDF membrane (Millipore Corp.) in 10 mM CAPS pH 11.0, 10% MeOH at 100 V constant. After one hour the PVDF membrane was rinsed in water briefly and placed for 3 minutes in 0.25% Coomassie blue R-250, 50% methanol, 5% acetic acid. The stained membrane was destained in 40% MeOH, 5% acetic acid. The destained membrane was air-dried at room temperature (LeGendre et al. [1989


] In A Practical Guide to Protein Purification For Microsequencing


, P. Matsudaira, ed., Academic Press, New York, N.Y.). The membrane was sequenced using automated gas phase Edman degradation (Hunkapillar, M. W., R. M. Hewick, W. L. Dreyer, L. E. Hood [1983


] Meth. Enzymol


. 91:399).




The amino acid analysis revealed that the N-terminal sequence of the 45 kDa band was as follows: Met-Leu-Asp-Thr-Asn (SEQ ID NO:1).




The 47 kDa band was also analyzed and the N-terminal amino acid sequence was determined to be the same 5-amino acid sequence as SEQ ID NO:1. Therefore, the N-terminal amino acid sequences of the 47 kDa peptide and the 45 kDa peptide were identical.




This amino acid sequence also corresponds to a sequence obtained from a 45 kDa peptide obtained from PS80JJ1 spore/crystal powders, using another purification protocol, with the N-terminal sequence as follows: Met-Leu-Asp-Thr-Asn-Lys-Val-Tyr-Glu-Ile-Ser-Asn-Leu-Ala-Asn-Gly-Leu-Tyr-Thr-Ser-Thr-Tyr-Leu-Ser-Leu (SEQ ID NO:2).




EXAMPLE 4




Purification of the 14 kDa Peptide of PS80JJ1




0.8 ml of the white dialysis suspension (approximately 21 mg/ml) containing the 47 kDa, 45 kDa, and 15 kDa peptides, was dissolved in 10 ml of 40% NaBr, and 0.5 ml of 100 mM EDTA were added. After about 18 hours (overnight), a white opaque suspension was obtained. This was collected by centrifugation and discarded. The supernatant was concentrated in a Centricon-30 (Amicon Corporation) to a final volume of approximately 15 ml. The filtered volume was washed with water by filter dialysis and incubated on ice, eventually forming a milky white suspension. The suspension was centrifuged and the pellet and supernatant were separated and retained. The pellet was then suspended in 1.0 ml water (approximately 6 mg/ml). The pellet contained substantially pure 15 kDa protein when analyzed by SDS-PAGE.




The N-terminal amino acid sequence was determined to be: Ser-Ala-Arg-Glu-Val-His-Ile-Glu-Ile-Asn-Asn-Thr-Arg-His-Thr-Leu-Gln-Leu-Glu-Ala-Lys-Thr-Lys-Leu (SEQ ID NO:3).




EXAMPLE 5




Bioassay of Protein




A preparation of the insoluble fraction from the dialyzed NaBr extract of 80JJ1 containing the 47 kDa, 45 kDa, and 15 kDa peptides was bioassayed against Western corn rootworm and were found to exhibit significant toxin activity.




EXAMPLE 6




Protein Purification and Characterization of PS149B1 45 kDa Protein




The P1 pellet was resuspended with two volumes of deionized water per unit wet weight, and to this was added nine volumes of 40% (w/w) aqueous sodium bromide. This and all subsequent operations were carried out on ice or at 4-6° C. After 30 minutes, the suspension was diluted with 36 volumes of chilled water and centrifuged at 25,000×g for 30 minutes to give a pellet and a supernatant.




The resulting pellet was resuspended in 1-2 volumes of water and layered on a 20-40% (w/w) sodium bromide gradient and centrifuged at 8,000×g for 100 minutes. The layer banding at approximately 32% (w/w) sodium bromide (the “inclusions”, or INC) was recovered and dialyzed overnight against water using a dialysis membrane with a 6-8 kDa MW cut-off. Particulate material was recovered by centrifugation at 25,000×g, resuspended in water, and aliquoted and assayed for protein by the method of Lowry and by SDS-PAGE.




The resulting supernatant was concentrated 3- to 4-fold using Centricon-10 concentrators, then dialyzed overnight against water using a dialysis membrane with a 6-8 kDa MW cut-off. Particulate material was recovered by centrifugation at 25,000×g, resuspended in water, and aliquoted and assayed for protein by the method of Lowry and by SDS-PAGE. This fraction was denoted as P1.P2.




The peptides in the pellet suspension were separated using SDS-PAGE (Laemlli, U. K., supra) in 15% acrylamide gels. The separated proteins were then electrophoretically blotted to a PVDF membrane (Millipore Corp.) in 10 mM CAPS pH 11.0, 10% MeOH at 100 V constant. After one hour the PVDF membrane was rinsed in water briefly and placed for 3 minutes in 0.25% Coomassie blue R-250, 50% methanol, 5% acetic acid. The stained membrane was destained in 40% MeOH, 5% acetic acid. The destained membrane was air-dried at room temperature (LeGendre et al., supra). The membrane was sequenced using automated gas phase Edman degradation (Hunkapillar et al., supra).




Protein analysis indicated the presence of two major polypeptides, with molecular weights of 47 kDa and 14 kDa. Molecular weights were measured against standard polypeptides of known molecular weight. This process provides only an estimate of true molecular weight. The 47 kDa band from PS149B1 migrated on SDS-PAGE in a manner indistinguishable from the 47 kDa protein from PS80JJ1. Likewise, the 14 kDa band from PS149B1 migrated on SDS-PAGE in a manner indistinguishable from 14 kDa bands from PS167H2 and PS80JJ1. Apart from these two polypeptides, which were estimated to account for 25-35% (47 kDa) and 35-55% (15 kDa) of the Coomassie staining material respectively, there may be minor bands, including those of estimated MW at 46 kDa, 130 kDa, and 70 kDa.




Protein analysis indicated that fraction INC contained a single polypeptide with MW of 47 kDa, and that fraction P1.P2 contained a single polypeptide with MW of 14 kDa. These polypeptides were recovered in yields greater than 50% from P1.




The N-terminal amino acid sequence for the purified 47 kDa protein from PS149B1 is: Met-Leu-Asp-Thr-Asn-Lys-Val-Tyr-Glu-Ile-Ser-Asn-His-Ala-Asn-Gly-Leu-Tyr-Ala-Ala-Thr-Tyr-Leu-Ser-Leu (SEQ ID NO:4).




The N-terminal amino acid sequence for the purified 14 kDa protein from PS149B1 is: Ser-Ala-Arg-Glu-Val-His-Ile-Asp-Val-Asn-Asn-Lys-Thr-Gly-His-Thr-Leu-Gln-Leu-Glu-Asp-Lys-Thr-Lys-Leu-Asp-Gly-Gly-Arg-Trp-Arg-Thr-Ser- Pro-Xaa-Asn-Val-Ala-Asn-Asp-Gln-Ile-Lys-Thr-Phe-Val-Ala-Glu-Ser-Asn (SEQ ID NO:5).




EXAMPLE 7




Amino Acid Sequence for 45 kDa and 14 kDa Toxins of PS167H2




The N-terminal amino acid sequence for the purified 45 kDa protein from PS167H2 is: Met-Leu-Asp-Thr-Asn-Lys-Ile-Tyr-Glu-Ile-Ser-Asn-Tyr-Ala-Asn-Gly-Leu-His-Ala-Ala-Thr-Tyr-Leu-Ser-Leu (SEQ ID NO:6).




The N-terminal amino acid sequence for the purified 14 kDa protein from PS167H2 is: Ser-Ala-Arg-Glu-Val-His-Ile-Asp-Val-Asn-Asn-Lys-Thr-Gly-His-Thr-Leu-Gln-Leu-Glu-Asp-Lys-Thr-Lys-Leu (SEQ ID NO:7).




These amino acid sequences can be compared to the sequence obtained for the 47 kDa peptide obtained from 80JJ1 spore/crystal powders with the N-terminal sequence (SEQ ID NO:1) and to the sequence obtained for the 14 kDa peptide obtained from 80JJ1 spore/crystal powders with the N-terminal sequence (SEQ ID NO:3).




Clearly, the 45-47 kDa proteins are highly related, and the 14 kDa proteins are highly related.




EXAMPLE 8




Bioassay of Protein




The purified protein fractions from PS149B1 were bioassayed against western corn rootworm and found to exhibit significant toxin activity when combined. In fact, the combination restored activity to that noted in the original preparation (P1). The following bioassay data set presents percent mortality and demonstrates this effect.
















TABLE 4









Concentration (μg/cm


2


)




PI




INC




P1.P2




INC + P1.P2



























300




88, 100, 94




19




13




100






100




94, 50, 63




31




38




94






33.3




19, 19, 44




38




13




50






11.1




13, 56, 25




12




31




13






3.7




0, 50, 0




0




31




13






1.2




13, 43, 12




0




12




19






0.4




6, 12, 6




25




19




6














EXAMPLE 9




Molecular Cloning, Expression, and DNA Sequence Analysis of a Novel δ-Endotoxin Gene From


Bacillus thuringiensis


Strain PS80JJ1




Total cellular DNA was prepared from


Bacillus thuringiensis


(


B.t


.) cells grown to an optical density, at 600 nm, of 1.0. Cells were pelleted by centrifugation and resuspended in protoplast buffer (20 mg/ml lysozyme in 0.3 M sucrose, 25 mM Tris-Cl [pH 8.0], 25 mM EDTA). After incubation at 37° C. for 1 hour, protoplasts were lysed by two cycles of freezing and thawing. Nine volumes of a solution of 0.1 M NaCl, 0.1% SDS, 0.1 M Tris-Cl were added to complete lysis. The cleared lysate was extracted twice with phenol:chloroform (1:1). Nucleic acids were precipitated with two volumes of ethanol and pelleted by centrifugation. The pellet was resuspended in TE buffer and RNase was added to a final concentration of 50 μg/ml. After incubation at 37° C. for 1 hour, the solution was extracted once each with phenol:chloroform (1:1) and TE-saturated chloroform. DNA was precipitated from the aqueous phase by the addition of one-tenth volume of 3 M NaOAc and two volumes of ethanol. DNA was pelleted by centrifugation, washed with 70% ethanol, dried, and resuspended in TE buffer.




An oligonucleotide probe for the gene encoding the PS80JJ1 45 kDa toxin was designed from N-terminal peptide sequence data. The sequence of the 29-base oligonucleotide probe was:




5′-ATG YTW GAT ACW AAT AAA GTW TAT GAA AT-3′ (SEQ ID NO:8)




This oligonucleotide was mixed at four positions as shown. This probe was radiolabeled with


32


P and used in standard condition hybridization of Southern blots of PS80JJ1 total cellular DNA digested with various restriction endonucleases. Representative autoradiographic data from these experiments showing the sizes of DNA restriction fragments containing sequence homology to the 44.3 kDa toxin oligonucleotide probe of SEQ ID NO:8 are presented in Table 5.












TABLE 5











RFLP of PS80JJ1 cellular DNA fragments on Southern blots that






hybridized under standard conditions with the 44.3 kDa toxin gene






oligonucleotide probe (SEQ ID NO: 8)














Restriction Enzyme




Approximate Fragment Size (kbp)


















EcoRI




6.0







HindIII




8.3







KpnI




7.4







PstI




11.5







XbaI




9.1















These DNA fragments identified in these analyses contain all or a segment of the PS80JJ1 45 kDa toxin gene. The approximate sizes of the hybridizing DNA fragments in Table 5 are in reasonable agreement with the sizes of a subset of the PS80JJ1 fragments hybridizing with a PS80JJ1 45 kDa toxin subgene probe used in separate experiments, as predicted (see Table 6, below).




A gene library was constructed from PS80JJ1 DNA partially digested with Sau3AI. Partial restriction digests were fractionated by agarose gel electrophoresis. DNA fragments 9.3 to 23 kbp in size were excised from the gel, electroeluted from the gel slice, purified on an Elutip-D ion exchange column (Schleicher and Schuell, Keene, N H), and recovered by ethanol precipitation. The Sau3AI inserts were ligated into BamHI-digested LambdaGem-11 (Promega, Madison, Wis.). Recombinant phage were packaged and plated on


E. coli


KW251 cells. Plaques were screened by hybridization with the oligonucleotide probe described above. Hybridizing phage were plaque-purified and used to infect liquid cultures of


E. coli


KW251 cells for isolation of DNA by standard procedures (Maniatis et al., supra).




Southern blot analysis revealed that one of the recombinant phage isolates contained an approximately 4.8 kbp Xbal-SacI band that hybridized to the PS80JJ1 toxin gene probe. The SacI site flanking the PS80JJ1 toxin gene is a phage vector cloning site, while the flanking XbaI site is located within the PS80JJ1 DNA insert. This DNA restriction fragment was subcloned by standard methods into pBluescript S/K (Stratagene, San Diego, Calif.) for sequence analysis. The resultant plasmid was designated pMYC2421. The DNA insert was also subcloned into pHTBlueII (an


E. coli/B. thuringiensis


shuttle vector comprised of pBluescript S/K [Stratagene, La Jolla, Calif.] and the replication origin from a resident


B.t


. plasmid [D. Lereclus et al. (1989)


FEMS Microbiology Letters


60:211-218]) to yield pMYC2420.




An oligonucleotide probe for the gene encoding the PS80JJ1 14 kDa toxin was designed from N-terminal peptide sequence data. The sequence of the 28-base oligonucleotide probe was: 5′ GW GAA GTW CAT ATW GAA ATW AAT AAT AC 3′ (SEQ ID NO:29). This oligonucleotide was mixed at four positions as shown. The probe was radiolabelled with


32


P and used in standard condition hybridizations of Southern blots of PS80JJ1 total cellular and pMYC2421 DNA digested with various restriction endonucleases. These RFLP mapping experiments demonstrated that the gene encoding the 14 kDa toxin is located on the same genomic EcoRI fragment that contains the N-terminal coding sequence for the 44.3 kDa toxin.




To test expression of the PS80JJ1 toxin genes in


B.t


., pMYC2420 was transformed into the acrystalliferous (Cry-)


B.t


. host, CryB (A. Aronson, Purdue University, West Lafayette, Ind.), by electroporation. Expression of both the approximately 14 and 44.3 kDa PS80JJ1 toxins encoded by pMYC2420 was demonstrated by SDS-PAGE analysis. Toxin crystal preparations from the recombinant CryB[pMYC2420] strain, MR536, were assayed and found to be active against western corn rootworm.




The PS80JJ1 toxin genes encoded by pMYC2421 were sequenced using the ABI373 automated sequencing system and associated software. The sequence of the entire genetic locus containing both open reading frames and flanking nucleotide sequences is shown in SEQ ID NO:30. The termination codon of the 14 kDa toxin gene is 121 base pairs upstream (5′) from the initiation codon of the 44.3 kDa toxin gene (FIG.


2


). The PS80JJ1 14 kDa toxin open reading frame nucleotide sequence (SEQ ID NO:31), the 44.3 kDa toxin open reading frame nucleotide sequence (SEQ ID NO:10), and the respective deduced amino acid sequences (SEQ ID NO:32 and SEQ ID NO:11) are novel compared to other toxin genes encoding pesticidal proteins.




Thus, the nucleotide sequence encoding the 14 kDa toxin of PS80JJ1 is shown in SEQ ID NO:31. The deduced amino acid sequence of the 14 kDa toxin of PS80JJ1 is shown in SEQ ID NO:32. The nucleotide sequences encoding both the 14 and 45 kDa toxins of PS80JJ1, as well as the flanking sequences, are shown in SEQ ID NO:30. The relationship of these sequences is shown in FIG.


2


.




A subculture of


E. coli


NM522 containing plasmid pMYC2421 was deposited in the permanent collection of the Patent Culture Collection (NRRL), Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Mar. 28, 1996. The accession number is NRRL B-21555.




EXAMPLE 10




RFLP and PCR Analysis of Additional Novel δ-Endotoxin Genes From


Bacillus thuringiensis


Strains PS149B1 and PS167H2




Two additional strains active against corn rootworm, PS149B1 and PS167H2, also produce parasporal protein crystals comprised in part of polypeptides approximately 14 and 45 kDa in size. Southern hybridization and partial DNA sequence analysis were used to examine the relatedness of these toxins to the 80JJ1 toxins. DNA was extracted from these


B.t


. strains as described above, and standard Southern hybridizations were performed using the 14 kDa toxin oligonucleotide probe (SEQ ID NO:29) and an approximately 800 bp PCR fragment of the 80JJ1 44.3 kDa toxin gene-encoding sequence. RFLP data from these experiments showing the sizes of DNA restriction fragments containing sequence homology to the 44.3 kDa toxin are presented in Table 6. RFLP data from these experiments showing the sizes of DNA restriction fragments containing sequence homology to the approximately 14 kDa toxin are presented in Table 7.












TABLE 6











RFLP of PS80JJ1, PS149B1, and PS167H2 cellular DNA fragments on






Southern blots that hybridized with the approximately 800 bp PS80JJ1






44.3 kDa toxin subgene probe under standard conditions













Strain















PS80JJ1




PS149B1




PS167H2














Restriction enzyme




Approximate fragment size (kbp)




















EcoRI




6.4




5.7




2.6








1.3




2.8








0.6







HindIII




8.2




6.2




4.4







KpnI




7.8




10.0




11.5







PstI




12.0




9.2




9.2










8.2







XbaI




9.4




10.9




10.9







SacI




17.5




15.5




11.1








13.1




10.5




6.3















Each of the three strains exhibited unique RFLP patterns. The hybridizing DNA fragments from PS149B1 or PS167H2 contain all or part of toxin genes with sequence homology to the PS80JJ1 44.3 kDa toxin.












TABLE 7











Restriction fragment length polymorphisms of PS80JJ1, PS149B1, and






PS167H2 cellular DNA fragments on Southern blots that hybridized with






the PS80JJ1 14 kDa toxin oligonucleotide probe under standard conditions













Strain















PS80JJ1




PS149B1




PS167H2














Restriction enzyme




Approximate fragment size (kbp)




















EcoRI




5.6




2.7




2.7







HindIII




7.1




6.0




4.7







XbaI




8.4




11.2




11.2















Each of the three strains exhibited unique RFLP patterns. The hybridizing DNA fragments from PS149B1 or PS167H2 contain all or part of toxin genes with sequence homology to the PS80JJ1 14 kDa toxin gene.




Portions of the toxin genes in PS149B1 or PS167H2 were amplified by PCR using forward and reverse oligonucleotide primer pairs designed based on the PS80JJ1 44.3 kDa toxin gene sequence. For PS149B1, the following primer pair was used:




Forward:




5′-ATG YTW GAT ACW AAT AAA GTW TAT GAA AT-3′ (SEQ ID NO:8)




Reverse:




5′-GGA TTA TCT ATC TCT GAG TGT TCT TG-3′ (SEQ ID NO:9)




For PS167H2, the same primer pair was used. These PCR-derived fragments were sequenced using the ABI373 automated sequencing system and associated software. The partial gene and peptide sequences obtained are shown in SEQ ID NO:12-15. These sequences contain portions of the nucleotide coding sequences and peptide sequences for novel corn rootworm-active toxins present in


B.t


. strains PS149B1 or PS167H2.




EXAMPLE 11




Molecular Cloning and DNA Sequence Analysis of Novel δ-Endotoxin Genes From


Bacillus thuringiensis


Strains PS149B1 and PS167H2




Total cellular DNA was extracted from strains PS149B1 and PS167H2 as described for PS80JJ1. Gene libraries of size-fractionated Sau3A partial restriction fragments were constructed in Lambda-Gem11 for each respective strain as previously described. Recombinant phage were packaged and plated on


E. coli


KW251 cells. Plaques were screened by hybridization with the oligonucleotide probe specific for the 44 kDa toxin gene. Hybridizing phage were plaque-purified and used to infect liquid cultures of


E. coli


KW251 cells for isolation of DNA by standard procedures (Maniatis et al., supra).




For PS167H2, Southern blot analysis revealed that one of the recombinant phage isolates contained an approximately 4.0 to 4.4 kbp HindIII band that hybridized to the PS80JJ1 44 kDa toxin gene 5′ oligonucleotide probe (SEQ ID NO:8). This DNA restriction fragment was subcloned by standard methods into pBluescript S/K (Stratgene, San Diego, Calif.) for sequence analysis. The fragment was also subcloned into the high copy number shuttle vector, pHT370 (Arantes, O., D. Lereclus [1991


] Gene


108:115-119) for expression analyses in


Bacillus thuringiensis


(see below). The resultant recombinant, high copy number bifunctional plasmid was designated pMYC2427.




The PS167H2 toxin genes encoded by pMYC2427 were sequenced using the ABI automated sequencing system and associated software. The sequence of the entire genetic locus containing both open reading frames and flanking nucleotide sequences is shown in SEQ ID NO:34. The termination codon of the 14 kDa toxin gene is 107 base pairs upstream (5′) from the initiation codon of the 44 kDa toxin gene. The PS167H2 14 kDa toxin coding sequence (SEQ ID NO:35), the 44 kDa toxin coding sequence (SEQ ID NO:37), and the respective deduced amino acid sequences, SEQ ID NO:36 and SEQ ID NO:38, are novel compared to other known toxin genes encoding pesticidal proteins. The toxin genes are arranged in a similar manner to, and have some homology with, the PS80JJ1 14 and 44 kDa toxins.




A subculture of


E. coli


NM522 containing plasmid pMYC2427 was deposited in the permanent collection of the Patent Culture Collection (NRRL), Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Mar. 26, 1997. The accession number is NRRL B-21672.




For PS149B1, Southern blot analysis using the PS80JJ1 44 kDa oligonucleotide 5′ probe (SEQ ID NO:8) demonstrated hybridization of an approximately 5.9 kbp ClaI DNA fragment. Complete ClaI digests of PS149B1 genomic DNA were size fractionated on agarose gels and cloned into pHTBlueII. The fragment was also subcloned into the high copy number shuttle vector, pHT370 (Arantes, O., D. Lereclus [1991


] Gene


108:115-119) for expression analyses in


Bacillus thuringiensis


(see below). The resultant recombinant, high copy number bifunctional plasmid was designated pMYC2429.




The PS149B1 toxin genes encoded by pMYC2429 were sequenced using the ABI automated sequencing system and associated software. The sequence of the entire genetic locus containing both open reading frames and flanking nucleotide sequences is shown in SEQ ID NO:39. The termination codon of the 14 kDa toxin gene is 108 base pairs upstream (5′) from the initiation codon of the 44 kDa toxin gene. The PS149B1 14 kDa toxin coding sequence (SEQ ID NO:40), the 44 kDa toxin coding sequence (SEQ ID NO:42), and the respective deduced amino acid sequences, SEQ ID NO:41 and SEQ ID NO:43, are novel compared to other known toxin genes encoding pesticidal proteins. The toxin genes are arranged in a similar manner as, and have some homology with, the PS80JJ1 and PS167H2 14 and 44 kDa toxins. Together, these three toxin operons comprise a new family of pesticidal toxins.




A subculture of


E. coli


NM522 containing plasmid pMYC2429 was deposited in the permanent collection of the Patent Culture Collection (NRRL), Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Mar. 26, 1997. The accession number is NRRL B-21673.




EXAMPLE 12




PCR Amplification for Identification and Cloning Novel Corn Rootworm-active Toxin




The DNA and peptide sequences of the three novel approximately 45 kDa corn rootworm-active toxins from PS80JJ1, PS149B1, and PS167H2 (SEQ ID NOS. 12-15) were aligned with the Genetics Computer Group sequence analysis program Pileup using a gap weight of 3.00 and a gap length weight of 0.10. The sequence alignments were used to identify conserved peptide sequences to which oligonucleotide primers were designed that were likely to hybridize to genes encoding members of this novel toxin family. Such primers can be used in PCR to amplify diagnostic DNA fragments for these and related toxin genes. Numerous primer designs to various sequences are possible, four of which are described here to provide an example. These peptide sequences are:




Asp-Ile-Asp-Asp-Tyr-Asn-Leu (SEQ ID NO:16)




Trp-Phe-Leu-Phe-Pro-Ile-Asp (SEQ ID NO:17)




Gln-Ile-Lys-Thr-Thr-Pro-Tyr-Tyr (SEQ ID NO:18)




Tyr-Glu-Trp-Gly-Thr-Glu (SEQ ID NO:19).




The corresponding nucleotide sequences are:




5′-GATATWGATGAYTAYAAYTTR-3′ (SEQ ID NO:20)




5′-TGGTTTTTRTTTCCWATWGAY-3′ (SEQ ID NO:21)




5′-CAAATHAAAACWACWCCATATTAT-3′ (SEQ ID NO:22)




5′-TAYGARTGGGGHACAGAA-3′ (SEQ ID NO:23).




Forward primers for polymerase amplification in thermocycle reactions were designed based on the nucleotide sequences of SEQ ID NOs:20 and 21.




Reverse primers were designed based on the reverse complement of SEQ ID NOs:22 and 23:




5′-ATAATATGGWGTWGTTTTDATTTG-3′ (SEQ ID NO:24)




5′-TTCTGTDCCCCAYTCRTA-3′ (SEQ ID NO:25).




These primers can be used in combination to amplify DNA fragments of the following sizes (Table 8) that identify genes encoding novel corn rootworm toxins.












TABLE 8











Predicted sizes of diagnostic DNA fragments (base pairs) amplifiable with






primers specific for novel corn rootworm-active toxins














Primer pair (SEQ ID NO.)




DNA fragment size (bp)











20 + 24




495







20 + 25




594







21 + 24




471







21 + 25




580















Similarly, entire genes encoding novel corn rootworm-active toxins can be isolated by polymerase amplification in thermocycle reactions using primers designed based on DNA sequences flanking the open reading frames. For the PS80JJ1 44.3 kDa toxin, one such primer pair was designed, synthesized, and used to amplify a diagnostic 1613 bp DNA fragment that included the entire toxin coding sequence. These primers are:




Forward: 5′-CTCAAAGCGGATCAGGAG-3′ (SEQ ID NO:26)




Reverse: 5′-GCGTATTCGGATATGCTTGG-3′ (SEQ ID NO:27).




For PCR amplification of the PS80JJ1 14 kDa toxin, the oligonucleotide coding for the N-terminal peptide sequence (SEQ ID NO:29) can be used in combination with various reverse oligonucleotide primers based on the sequences in the PS80JJ1 toxin gene locus. One such reverse primer has the following sequence:




5′ CATGAGATTTATCTCCTGATCCGC 3′ (SEQ ID NO:33).




When used in standard PCR reactions, this primer pair amplified a diagnostic 1390 bp DNA fragment that includes the entire 14 kDa toxin coding sequence and some 3′ flanking sequences corresponding to the 121 base intergenic spacer and a portion of the 44.3 kDa toxin gene. When used in combination with the 14 kDa forward primer, PCR will generate a diagnostic 322 base pair DNA fragment.




EXAMPLE 13




Clone Dose-response Bioassays




The PS80JJ1 toxin operon was subcloned from pMYC2421 into pHT370 for direct comparison of bioactivity with the recombinant toxins cloned from PS149B1 and PS167H2. The resultant recombinant, high copy number bifunctional plasmid was designated pMYC2426.




A subculture of


E. coli


NM522 containing plasmid pMYC2426 was deposited in the permanent collection of the Patent Culture Collection (NRRL), Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Mar. 26, 1997. The accession number is NRRL B-21671.




To test expression of the PS80JJ1, PS149B1 and PS167H2 toxin genes in


B.t


., pMYC2426, pMYC2427 and pMYC2429 were separately transformed into the acrystalliferous (Cry-)


B.t


. host, CryB (A. Aronson, Purdue University, West Lafayette, Ind.), by electroporation. The recombinant strains were designated MR543 (CryB [pMYC2426]), MR544 (CryB [pMYC2427]) and MR546 (CryB [pMYC2429]), respectively. Expression of both the approximately 14 and 44 kDa toxins was demonstrated by SDS-PAGE analysis for each recombinant strain.




Toxin crystal preparations from the recombinant strains were assayed against western corn rootworm. Their diet was amended with sorbic acid and SIGMA pen-strep-ampho-B. The material was top-loaded at a rate of 50 μl of suspension per cm


2


diet surface area. Bioassays were run with neonate Western corn rootworm larvae for 4 days at approximately 25° C. Percentage mortality and top-load LC


50


estimates for the clones (pellets) are set forth in Table 9. A dH2O control yielded 7% mortality.














TABLE 9













Percentage mortality at







given protein concentration (μg/cm


2


)
















Sample




50 μg/cm


2






5 μg/cm


2






0.5 μg/cm


2













MR543 pellet




44%




19%




 9%







MR544 pellet




72%




32%




21%







MR546 pellet




52%




32%




21%















The amounts of 14 kDa and 44.3 kDa proteins present in the crystal preparations were estimated by densitometry and used to calculate specific activity expressed as LC


50


. LC


50


estimates for the clones (pellets) are set forth in Table 10 (WCRW top load bioassay of


B.t


. clones).












TABLE 10











WCRW Top Load Bioassay of


B.t.


Clones


















B.t.


Parental











B.t.


Clone




Strain




LC


50


(μg/cm


2


)*




95% CL




Slope


















MR543




PS80JJ1




37 




17-366*




0.79






MR544




PS167H2




10 




6-14 




1.6






MR546




PS149B1




8




4-12 




1.5






N/A




CzyB cell blank




 4%




N/A




N/A






N/A




Water blank




 4%




N/A




N/A











*Percentage mortality at top dose is provided for controls










**90% CL













EXAMPLE 14




Mutational Analysis of the 14 and 44 kDa Polypeptides in the PS80JJ1 Binary Toxin Operon




Binary toxin genes of the subject invention are, in their wild-type state, typically arranged in an operon wherein the 14 kDa protein gene is transcribed first, followed by that of the 45 kDa protein gene. These genes are separated by a relatively short, non-coding region. Representative ORFs are shown in SEQ ID NO:30, SEQ ID NO:34, and SEQ ID NO:39.




In order to investigate the contribution of the individual 14 and 44.3 kDa crystal proteins to corn rootworm activity, each gene in the PS80JJ1 operon was mutated in separate experiments to abolish expression of one of the proteins. The intact gene was then expressed in


B.t


. and recombinant proteins were tested for activity against corn rootworm.




First, the 44.3 kDa gene encoded on pMYC2421 was mutated by truncation at the EcoRI site at base position 387 of the open reading frame. This truncation and subsequent ligation with vector sequences resulted in an open reading frame encoding an approximately 24 kDa hypothetical fusion protein. The resulting operon encoding the intact 14 kDa gene and the truncated 45 kDa gene was subcloned into the high copy number shuttle vector, pHT370 (Arantes, O., D. Lereclus [1991


] Gene


108:115-119) for expression analyses in


Bacillus thuringiensis


. The resulting plasmid, pMYC2424 was transformed into the acrystalliferous (Cry-)


B.t


. host, CryB (A. Aronson, Purdue University, West Lafayette, Ind.), by electroporation. The resulting recombinant strain was designated MR541. Only the 14 kDa PS80JJ1 protein was detectable by SDSPAGE analysis of sporulated cultures of MR541. Mortality was not observed for preparations of MR541 expressing only the 14 kDa PS80JJ1 protein in top-load bioassays against corn rootworm.




Next, the 14 kDa gene encoded on pMYC2421 was mutated by insertion of an oligonucleotide linker containing termination codons in all possible reading frames at the Nrul site at base position 11 of the open reading frame. The sequence of this linker is 5′ TGAGTAACTAGATCTATTCAATTA 3′. The linker introduces a BglII site for confirmation of insertion by BglII restriction digestion. Plasmid clones containing the mutagenic linker were identified with BglII and sequenced for verification. The operon insert encoding the 14 kDa nonsense mutations was subcloned into pHT370, resulting in plasmid pMYC2425. This plasmid was transformed into CryB by electroporation to yield the recombinant


B.t


. strain MR542. Only the 44.3 kDa PS80JJ1 protein was expressed in sporulated cultures of MR542 as shown by SDSPAGE analysis. Mortality against corn rootworm was not observed for preparations of MR542 expressing only the 44.3 kDa PS80JJ1 protein.




EXAMPLE 15




Single Gene Heterologous Expression, Purification and Bioassay of the 14 and 44.3 kDa Polypeptides From PS149B1 in


Pseudomonas fluorescens






The 14 kDa and 44.3 kDa polypeptide genes from PS149B1 were separately engineered into plasmid vectors by standard DNA cloning methods, and transformed into


Psuedomonas flourescens


. The recombinant


Pseudomonas fluorescens


strain expressing only the PS149B1 14 kDa gene was designated MR1253. The recombinant


Pseudomonas fluorescens


strain expressing only the PS149B1 44.3 kDa gene was designated MR1256.




MR1253 and MR1256 each individually expressing one of the two binary proteins were grown in 1 L fermentation tanks. A portion of each culture was then pelleted by centrifugation, lysed with lysozyme, and treated with DNAse I to obtain semi-pure protein inclusions. These inclusions were then solubilized in 50 mM Sodium Citrate (pH 3.3) by gentle rocking at 4° C. for 1 hour. The 14 kDa protein dissolved readily in this buffer whereas the 44.3 kDa protein was partially soluble. The solubilized fractions were then centrifuged at 15,000×g for 20 minutes; and the supernatants were retained.




The 14 kDa protein was further purified through ion-exchange chromatography. The solubilized 14 kDa protein was bound to a Econo-S column and eluted with a Sodium Chloride 0-1M gradient.




The chromatographically pure MR1253 (14 kDa protein) and the Sodium Citrate (pH3.3) solubilized preparation of MR1256 (45 kDa protein) were then tested for activity on corn rootworm individually or together at a molar ratio of 1 to 10 (45 kDa protein to 14 kDa protein). Observed mortality for each of the proteins alone was not above background levels (of the water/control sample) but 87% mortality resulted when they were combined in the above ratio (see Table 11).

















TABLE 11









Molar ratio




load




ug 45 kD/




ug 14 kD/




Total ug




CRW






(45 kD to 14 kD)




volume




well




well




protein




Mortality




























0 to 1




100 ul




0




260




260




13






1 to 0




200 ul




260




0




260




9






 1 to 10




100 ul




65




195




260




87






water




100 ul




0




0




0




11














EXAMPLE 16




Identification of Additional Novel 14 kDa and 44.3 kDa Toxin Genes by Hybridization of Total


B.t


. Genomic DNA and by RFLP




Total genomic DNA from each isolate was prepared using the Qiagen DNEasy 96 well tissue kit. DNA in 96-well plates was denatured prior to blotting by adding 10 ul of each DNA sample and 10 ul of 4 M NaOH to 80 ul sterile distilled water. Samples were incubated at 70° C. for one hour after which 100 ul of 20×SSC was added to each well. PS149B1 total genomic DNA was included with each set of 94 samples as a positive hybridization control, and cryb- total genomic DNA was included with each set of 94 samples as a negative hybridization control. Each set of 96 samples was applied to Magnacharge nylon membranes using two 48 well slot blot manifolds (Hoefer Scientific), followed by two washes with 10×SSC. Membranes were baked at 80° C. for one hour and kept dry until used. Membranes were prehybridized and hybridized in standard formamide solution (50% formamide, 5×SSPE, 5×Denhardt's solution, 2% SDS, 100 ug/ml single stranded DNA) at 42° C. Membranes were washed under two conditions: 2×SSC/0.1% SDS at 42° C. (low stringency) and 0.2×SSC/0.1% SDS at 65° C. (moderate to high stringency). Membranes were probed with an approximately 1.3 kilobase pair PCR fragment of the P5149B1 44.3 kDa gene amplified from pMYC2429 using forward primer SEQ ID NO:8 and a reverse primer with the sequence 5′ GTAGAAGCAGAACAAGAAGGTATT 3′ (SEQ ID NO:46). The probe was radioactively labeled using the Prime-it II kit (Stratagene) and 32-P-dCTP, purified on Sephadex columns, denatured at 94° C. and added to fresh hybridization solution. Strains containing genes with homology to the PS149B1 probe were identified by exposing membranes to X-ray film.




The following strains were identified by positive hybridization reactions: PS184M2, PS185GG, PS187G1, PS187Y2, PS201G, PS201HH2, PS242K10, PS69Q, KB54A1-6, KR136, KR589, PS185L12, PS185W3, PS185Z11, PS186L9, PS187L14, PS186FF, PS131W2, PS147U2, PS158T3, PS158X10, PS185FF, PS187F3, PS198H3, PS201H2, PS201L3, PS203G2, PS203J1, PS204C3, PS204G4, PS204I11, PS204J7, PS210B, PS213E8, PS223L2, PS224F2, PS236B6, PS246P42, PS247C16, KR200, KR331, KR625, KR707, KR959, KR1209, KR1369, KB2C-4, KB10H-5, KB456, KB42C17-13, KB45A43-3, KB54A33-1, KB58A10-3, KB59A54-4, KB59A54-5, KB53B7-8, KB53B7-2, KB60F5-7, KB60F5-11, KB59A58-4, KB60F5-15, KB61A18-1, KB65A15-2, KB65A15-3, KB65A15-7, KB65A15-8, KB65A15-12, KB65A14-1, KB3F-3, T25, KB53A71-6, KB65A11-2, KB68B57-1, KB63A5-3, and KB71A118-6.




Further identification and classification of novel toxin genes in preparations of total genomic DNA was performed using the


32


P-labeled probes and hybridization conditions described above in this Example. Total genomic DNA was prepared as above or with Qiagen Genomic-Tip 20/G and Genomic DNA Buffer Set according to protocol for Gram positive bacteria (Qiagen Inc.; Valencia, Calif.) was used in southern analysis. For Southern blots, approximately 1-2 μg of total genomic DNA from each strain identified by slot blot analysis was digested with DraI and NdeI enzymes, electrophoresed on a 0.8% agarose gel, and immobilized on a supported nylon membrane using standard methods (Maniatis et al.). After hybridization, membranes were washed under low stringency (2×SSC/0.1% SDS at 42° C.) and exposed to film. DNA fragment sizes were estimated using BioRad Chemidoc system software. Restriction fragment length polymorphisms were used to (arbitrarily) classify genes encoding the 44 kDa toxin. These classifications are set forth in Table 12.













TABLE 12









RFLP Class







(45 & 14 kD)




Isolate Strain Name
























A




149B1






 A′




KR331, KR1209, KR1369






B




167H2, 242K10






C




184M2, 201G, 201HH2






D




185GG, 187Y2, 185FF1, 187F3






E




187G1






F




80JJ1, 186FF, 246P42






G




69Q






H




KB54A1-6






I




KR136






J




KR589






K




185L12, 185W3, 185Z11,







186L9, 187L14






L




147U2, 210B, KB10H-5, KB58A10-3,







KB59A54-4, KB59A54-5, KB59A58-4,







KB65A14-1






M




158T3, 158X10






N




201H2, 201L3, 203G2, 203J1, 204C3, 204G4,







204I11, 204J7, 236B6






P




223L2, 224F2






 P′




247C16, KB45A43-3, KB53B7-8, KB53B7-2,







KB61A18-1, KB3F-3, KB53A71-6, KB6SA11-







2, KB68B57-1, KB63A5-3, KB71A118-6






Q




213E8, KB60F5-11, KB60F5-15






R




KR959






S




KB2C-4, KB46, KB42C17-13






T




KB54A33-1, KB60F5-7






U




T25






V




KB65A15-2, KB65A15-3, KB65A15-7,







KB65A15-8, KB65A15-12














EXAMPLE 17




DNA Sequencing of Additional Binary Toxin Genes




Degenerate oligonucleotides were designed to amplify all or part of the 14 and 44.3 kDa genes from


B.t


. strains identified by hybridization with the 149B1 PCR product described above. The oligonucleotides were designed to conserved sequence blocks identified by alignment of the 14 kDa or 44.3 kDa genes from PS149B1, PS167H2 and PS80JJ1. Forward primers for both genes were designed to begin at the ATG initiation codon. Reserve primers were designed as close to the 3′ end of each respective gene as possible.




The primers designed to amplify the 14 kDa gene are as follows:




















149DEG1 (forward):







5′-ATG TCA GCW CGY GAA GTW CAY ATT G-3′(SEQ







ID NO: 47)







149DEG2 (reverse):







5′-GTY TGA ATH GTA TAH GTH ACA TG-3′(SEQ ID







NO: 48)















These primers amplify a product of approximately 340 base pairs.




The primers designed to amplify the 44.3 kDa gene are as follows:




















149DEG3 (forward):







5′-ATG TTA GAT ACW AAT AAA RTW TAT G -3′(SEQ







ID NO: 49)







149DEG4 (reverse):







5′-GTW ATT TCT TCW ACT TCT TCA TAH GAA G-3′







(SEQ ID NO: 50)















These primers amplify a product of approximately 1,100 base pairs.




The PCR conditions used to amplify gene products are as follows:




95° C., 1 min., one cycle




95° C., 1 min.




50° C., 2 min., this set repeated 35 cycles




72° C., 2 min.




72° C., 10 min., one cycle




PCR products were fractionated on 1% agarose gels and purified from the gel matrix using the Qiaexll kit (Qiagen). The resulting purified fragments were ligated into the pCR-TOPO cloning vector using the TOPO TA cloning kit (Invitrogen). After ligation, one half of the ligation reaction was transformed into XL10 Gold ultracompetant cells (Stratagene). Transformants were then screened by PCR with vector primers 1212 and 1233. Clones containing inserts were grown on the LB/carbenicillin medium for preparation of plasmids using the Qiagen plasmid DNA miniprep kit (Qiagen). Cloned PCR-derived fragments were then sequenced using Applied Biosystems automated sequencing systems and associated software. Sequences of additional novel binary toxin genes and polypeptides related to the holotype 14 and 44.3 kDa toxins from PS80JJ1 and PS149B1 are listed as SEQ ID NOS. 51-126. The section above, entitled “Brief Description of the Sequences,” provides a further explanation of these sequences.




The 14 kDa-type toxins and genes from three additional


B.t


. strains, PS137A, PS201V2 and PS207C3, were also sequenced using the above procedures (with any differences noted below). PCR using the 149DEG1 (forward) and 149DEG2 (reverse) primers was performed. These primers amplify a product of approximately 340 base pairs. The PCR was performed with the following conditions:




1. 95° C., 3 min.




2. 94° C., 1 min.




3. 42° C., 2 min.




4. 72° C., 3 min.+5 sec./cycle




5. Steps 2 through 4 repeated 29 times




PCR products were gel purified using the QiaQuick gel extraction kit (Qiagen), the purified fragment was ligated into the pCR-TOPO cloning vector using the TOPO-TA kit (Invitrogen), and subsequently transformed into XL10-Gold Ultracompetent


E. coli


cells (Strategene). Preparation of transformant DNA is described above. Sequences of the 14 kDa toxin gene for each of the three new strains were obtained as per above. The nucleotide and polypeptide sequences are provided in the attached Sequence Listing as follows: PS137A (SEQ ID NOs:149 and 150), PS201V2 (SEQ ID NOs:151 and 152), and PS207C3 (SEQ ID NOs:153 and 154).




EXAMPLE 18




PS149B1 Toxin Transgenes and Plant Transformation




Separate synthetic transgenes optimized for maize codon usage were designed for both the 14 and 44.3 kDa toxin components. The synthetic versions were designed to modify the guanine and cytosine codon bias to a level more typical for plant DNA. Preferred plant-optimized transgenes are described in SEQ ID NOs:127-128. The promoter region used for expression of both transgenes was the


Zea mays


ubiquitin promoter plus


Z. mays


exon 1 and


Z. mays


intron 1 (Christensen, A. H. et al. (1992) Plant Mol. Biol. 18:675-689). The transcriptional terminator used for both transgenes was the potato proteinase inhibitor II (PinII) terminator (An, G. et al. 1989 Plant Cell 1:115-22).




Phosphinothricin acetyltransferase (PAT) was used as the selectable marker for plant transformation. The phosphinothricin acetyltransferase gene (pat) was isolated from the bacterium


Streptomyces viridochromogenes


(Eckes P. et al., 1989). The PAT protein acetylates phosphinothricin, or its precursor demethylphosphinothricin, conferring tolerance to a chemically synthesized phosphinothricin such as the herbicide glufosinate-ammonium. Acetylation converts phosphinothricin to an inactive form that is no longer toxic to corn plants. Glufosinate ammonium is a broad spectrum, non-systemic, non-selective herbicide. Regenerating corn tissue or individual corn plants tolerant to glufosinate ammonium herbicide can be readily identified through incorporation of PAT into regeneration medium or by spray application of the herbicide to leaves.




The synthetic version of the pat gene was produced in order to modify the guanine and cytosine codon bias to a level more typical for plant DNA. The promoter for the pat gene is the CaMV promoter of the 35S transcript from cauliflower mosiac virus (Pietrzak et al., 1986). The transcriptional terminator is the CaMV 35 S terminator.




For transformation of maize tissue, a linear portion of DNA, containing both the PS149B1 14 and 44.3 kDa and pat selectable marker coding sequences, and the regulatory components necessary for expression, was excised from a complete plasmid. This linear portion of DNA, termed an insert, was used in the transformation process.




Maize plants containing PS149B1 14 kDa and 44.3 kDa transgenes were obtained by microprojectile bombardment using the Biolistics®Ò PDS-100He particle gun manufactured by Bio-Rad, essentially as described by Klein et al. (1987). Immature embryos isolated from corn ears harvested approximately 15 days after pollination were cultured on callus initiation medium for three to eight days. On the day of transformation, microscopic tungsten particles were coated with purified DNA and accelerated into the cultured embryos, where the insert DNA was incorporated into the cell chromosome. Six days after bombardment, bombarded embryos were transferred to callus initiation medium containing glufosinate (Bialaphos) as the selection agent. Healthy, resistant callus tissue was obtained and repeatedly transferred to fresh selection medium for approximately 12 weeks. Plants were regenerated and transferred to the greenhouse. A total of 436 regenerated plants were obtained. Leaf samples were taken for molecular analysis to verify the presence of the transgenes by PCR and to confirm expression of the foreign protein by ELISA. Plants were then subjected to a whole plant bioassay using western corn rootworm. Positive plants were crossed with inbred lines to obtain seed from the initial transformed plants. These plants were found to be resistant to damage by corn rootworm in both greenhouse and field trials.




EXAMPLE 19




Further Bioassays




Protein preparations from the strains identified on Example 16 were assayed for activity against western corn rootworm using the basic top load assay methods, as described in Example 13. The results are shown in Table 13.
















TABLE 13











Strain




LC


50


(ug/cm2)




95% Cl




























KB45A43-3




9.48




6.58-15.27







213′E′8




10.24




7.50-19.87







KR707




11.17




 8.27-22.54#







185GG




11.53




7.51-16.81







187Y2




13.82




11.08-17.67 







149B1




14.77




4.91-27.34







69Q




27.52




117.28-14.77# 







167H2




31.38




19.35-47.60 







KB54A33-10




32.62




24.76-83.85 







185Z11




34.47




ND







KB60F5-7




34.67




19.15-124.29







242K10




34.73




21.08-58.25 







201G




34.90




 13.20-355.18#







204J7




38.57




29.83-48.82 







KB60F5-15




38.62




  15.00-2.59E03







80JJ1




41.96




27.35-139.43







203J1




43.85




23.18-69.51 







KR589




47.28




 29.83-230.71#







201HH2




49.94




23.83-351.77







KB60FS-11




51.84




 19.38-1313.75#







158X10




52.25




43.13-77.84#







KB58A10-3




53.77




ND







201L3




55.01




41.01-78.96 







158T3




58.07




39.59-211.13







184M2




60.54




26.57-411.88







204G4




69.09




52.32-93.83 







KB59A58-4




70.35




48.90-144.90







201H2




71.11




52.40-130.35







203G2




81.93




57.13-226.33







KB59A54-4




82.03




  38.50-1.63E03







204I11




88.41




62.48-173.07







236B6




89.33




64.16-158.96







KR1369




93.25




 71.97-205.04#







KB63A5-3




94.52




51.56-542.46







204C3




125.45




 85.26-427.67#







KR1209




128.14




91.57-294.56







185W3




130.61




ND







KR625




160.36




ND







210B




201.26










   48.51-0.14E + 06#







KB10H-5




214.25









   87.97-8.22E + 03







KB68B57-1




264.30










   48.51-8.95E + 04#







223L2




3.81E + 02




ND







KR136




7.83E + 02












T25




1.30E + 03




ND







KB61A18-1




2.58E + 03




ND







147U2




3.67E + 03




ND







KR200




2.14E + 05




ND







KB59A54-5




3.32E + 05




ND







KB3F-3




4.07E + 05




ND







187G1(bs)




3.50E + 07




ND







MR559




20%**




n/a







KB42C17-13




26%**




n/a







224F2




33%**




n/a







KR959




41%**




n/a







KB2C-4




42%**




n/a







198H3




46%**




n/a







KR331




47%**




n/a







KB46




55%**




n/a







KB71A118-6




71%**




n/a







KB53B7-2




84%**




n/a







187Y2




ND




n/a







185L12




ND




ND







186L9




ND




n/a







KB54A1-6




ND




n/a







187L14




ND




n/a







187G1(b)




nt




nt







187G1(s)




nt




nt















EXAMPLE 20




Molecular Cloning, Expression, and DNA Sequence Analysis of a Novel Binary Endotoxin Gene from


Bacillus thuringiensis


Strain PS201L3




Genomic DNA from PS201L3 was prepared from cells grown in shake flask culture using a Qiagen Genomic-tip 500/G kit and Genomic DNA Buffer Set according to the protocol for Gram positive bacteria (Qiagen Inc.; Valencia, Calif.). A gene library was constructed from PS201L3 DNA partially digested with Sau3AI. Partial restriction digests were fractionated by agarose gel electrophoresis. DNA fragments 9.3 to 23 kbp in size were excised from the gel, electroeluted from the gel slice, purified on an Elutip-D ion exchange column (Schleicher and Schuell, Keene, N.H.), and recovered by ethanol precipitation. The Sau3AI inserts were ligated into BamHI-digested LambdaGem-11 (Promega, Madison, Wis.). Recombinant phage were packaged using Gigapack III XL Packaging Extract (Stratagene, La Jolla, Calif.) and plated on


E. coli


KW251 cells. Plaques were lifted onto Nytran Nylon Transfer Membranes (Schleicher & Schuell, Keene, N.H.) and probed with a


32


P-dCTP labeled gene probe for binary toxin coding sequences. This gene probe was an approximately 1.0 kb PCR product amplified using genomic PS201L3 DNA template and oligonucleotides “15kfor1” and “45krev6.”


















15kfor1 (SEQ ID NO: 131)




ATGTCAGCTCGCGAAGTACAC






45krev6 (SEQ ID NO: 132)




GTCCATCCCATTAATTGAGGAG














The membranes were hybridized with the probe overnight at 65° C. and then washed three times with 1×SSPE and 0.1% SDS. Thirteen plaques were identified by autoradiography. These plaques were subsequently picked and soaked overnight in 1 mL SM Buffer+10 uL CHCl


3


. Phage were plated for confluent lysis on KW251 host cells; 6 confluent plates were soaked in SM and used for large-scale phage DNA preparations. The purified phage DNA was digested with various enzymes and run on 0.7% agarose gels. The gels were transferred to Nytran Membranes by Southern blotting and probed with the same PCR-amplified DNA fragment as above. An approximately 6.0 kb hybridizing XbaI band was identified and subcloned into pHT370, an


E. coli/Bacillus thuringiensis


shuttle vector (Arantes, O., D. Lereclus [1991


] Gene


108:115-119) to generate pMYC2476. XL10 Gold Ultracompetent


E. coli


cells (Stratagene) transformed with pMYC2476 were designated MR1506. PMYC2476 was subsequently transformed into acrytalliferous CryB cells by electroporation and selection on DM3+erythromycin (20 ug/mL) plates at 30° C. Recombinant CryB[pMYC2476] was designated MR561.




A subculture of MR1506 was deposited in the permanent collection of the Patent Culture Collection (NRRL), Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Jun. 1, 2000. The accession number is B-30298.






B.t


. strain MR561 was examined for expression of the PS201L3 binary toxin proteins by immunoblotting. Cells were grown in liquid NYS-CAA medium+erythromycin (10 ug/ml) overnight at 30° C. The culture was then pelleted by centrifugation and a portion of the cell pellet was resuspended and run on SDS-PAGE gels. Both 14 kDa and 44 kDa proteins were apparent by Western Blot analysis when probed with antibodies specific for either the PS149B1 14 kDa or 44 kDa toxins, respectively.




DNA sequencing of the toxin genes encoded on pMYC2476 was performed using an ABI377 automated sequencer. The DNA sequence for PS201L3 14 kDa gene is shown in SEQ ID NO:133. The deduced peptide sequence for PS201L3 14 kDa toxin is shown in SEQ ID NO:134. The DNA sequence for PS201L3 44 kDa gene is shown in SEQ ID NO:135. The deduced peptide sequence for PS201L3 44 kDa toxin is shown in SEQ ID NO:136.




The following table shows sequence similarity and identity of binary genes and proteins from 201IL3 and 149B1. The program BESTFIT (part of the GCG software package) was used for these comparisons. BESTFIT uses the local homology algorithm of Smith and Waterman (


Advances in Applied Mathematics


2: 482-489 (1981)).
















TABLE 14











201L3 vs 149B1




% similarity




% identity













14 kDa nucleotide seq









71.1







14 kDa peptide seq




63.9




54.1







45 kDa nucleotide seq









76.1







45 kDa peptide seq




70.9




62.7















EXAMPLE 21




Molecular Cloning and DNA Sequence Analysis of Novel δ-Endotoxin Genes From


Bacillus thuringiensis


Strains PS187G1, PS201HH2 and KR1369




Total cellular DNA was prepared from


Bacillus thuringensis


strains PS187G1, PS201HH2 and KR1369 grown to an optical density of 0.5-1.0 at 600 nm visible light in Luria Bertani (LB) broth. DNA was extracted using the Qiagen Genomic-tip 500/G kit and Genomic DNA Buffer Set according to the protocol for Gram positive bacteria (Qiagen Inc.; Valencia, Calif.). PS187G1, PS201HH2 and KR1369 cosmid libraries were constructed in the SuperCos1 vector (Stratragene) using inserts of PS187G1, PS201HH2 and KR1369 total cellular DNA, respectively, partially digested with Nde II. XL1-Blue MR cells (Stratagene) were transfected with packaged cosmids to obtain clones resistant to carbenicillin and kanamycin. For each strain, 576 cosmid colonies were grown in 96-well blocks in 1 ml LB+carbenicillin (100 ug/ml)+kanamycin (50 ug/ml) at 37° C. for 18 hours and replica plated onto nylon filters for screening by hybridization.




A PCR amplicon containing approximately 1000 bp of the PS187G1, PS201HH2 or KR1369 14 kDa and 44 kDa toxin operon was amplified from PS187G1, PS201HH2 or KR1369 genomic DNA using primers designed to amplify binary homologs:

















15kfor1: 5′-ATG TCA GCT CGC GAA GTA CAC-3′ (SEQ ID NO: 131)






45krev6:






5′-GTC CAT CCC ATT AAT TGA GGA G-3′ (SEQ ID NO: 132)














The DNA fragment was gel purified using QiaQuick extraction (Qiagen). The probe was radiolabeled with


32


P-dCTP using the Prime-It II kit (Stratgene) and used in aqueous hybridization solution (6×SSPE, 5×Denhardt's solution, 0.1% SDS, 0.1 mg/ml denatured DNA) with the colony lift filters at 65° C. for 16 hours. The colony lift filters were briefly washed 1× in 0.5×SSC/0.1%SDS at room temperature followed by two additional washes for 10 minutes at 65° C. in 0.5×SSC/0.1%SDS. The filters were then exposed to X-ray film for 20 minutes (PS187G1 and PS201HH2) or for 1 hour (KR1369). One cosmid clone that hybridized strongly to the probe was selected for further analysis for each strain. These cosmid clones were confirmed to contain the approximately 1000 bp 14 kDa and 44 kDa toxin gene target by PCR amplification with the primers listed above. The cosmid clone of PS187G1 was designated as pMYC3106; recombinant


E. coli


XL1-Blue MR cells containing pMYC3106 are designated MR1508. The cosmid clone of PS201HH2 was designated as pMYC3107; recombinant


E. coli


XL1-Blue MR cells containing pMYC3107 are designated MR1509. The cosmid clone of KR1369 was designated as pMYC3108; recombinant


E. coli


XL1-Blue MR cells containing pMYC3108 are designated MR1510. Subcultures of MR1509 and MR1510 were deposited in the permanent collection of the Patent Culture Collection (NRRL),Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Aug. 8, 2000. The accession numbers are NRRL B-30330 and NRRL-B 30331, respectively.




The PS187G1, PS201HH2 and KR1369 14 kDa and 44 kDa toxin genes encoded by pMYC3106, pMYC3107 and pMYC3108, respectively, were sequenced using the ABI377 automated sequencing system and associated software.




The PS187G1 14 kDa and 44 kDa nucleotide and deduced polypeptide sequences are shown as SEQ ID NOs:137-140. Both the 14 kDa and 44 kDa toxin gene sequences are complete open reading frames. The PS187G1 14 kDa toxin open reading frame nucleotide sequence, the 44 kDa toxin open reading frame nucleotide sequence, and the respective deduced amino acid sequences are novel compared to other toxin genes encoding pesticidal proteins.




The PS201HH2 14 kDa and 44 kDa nucleotide and deduced polypeptide sequences are shown as SEQ ID NOs:141-144. The 14 kDa toxin gene sequence is the complete open reading frame. The 44 kDa toxin gene sequence is a partial sequence of the gene. The PS201HH2 14 kDa toxin open reading frame nucleotide sequence, the 44 kDa toxin partial open reading frame nucleotide sequence, and the respective deduced amino acid sequences are novel compared to other toxin genes encoding pesticidal proteins.




The KR1369 14 kDa and 44 kDa nucleotide and deduced polypeptide sequences are shown as SEQ ID NOs:145-148. Both the 14 kDa and 44 kDa toxin gene sequences are complete open reading frames. The KR1369 14 kDa toxin open reading frame nucleotide sequence, the 44 kDa toxin open reading frame nucleotide sequence, and the respective deduced amino acid sequences are novel compared to other toxin genes encoding pesticidal proteins.




EXAMPLE 22




Construction and Expression of a Hybrid Gene Fusion Containing the PS149B1 14 kDa and 44 kDa Binary Toxin Genes




Oligonucleotide primers were designed to the 5′ and 3′ ends of both the 14 kDa and 44 kDa genes from PS149B1. These oligonucleotides were designed to create a gene fusion by SOE-PCR (“Gene Splicing By Overlap Extension: Tailor-made Genes Using PCR,”


Biotechniques


8:528-535, May 1990). The two genes were fused together in the reverse order found in the native binary toxin operon (i.e. 44 kDa gene first, followed by the 14 kDa gene.)




The sequences of the olignucleotides used for SOE-PCR were the following:

















F1 new:






AAATATTATTTTATGTCAGCACGTGAAGTACACATTG (SEQ ID






NO: 155)






R1 new: tctctGGTACCttaTTAtgatttatgcccatatcgtgagg (SEQ ID NO: 156)






F2 new:






agagaCTAGTaaaaaggagataaccATGttagatactaataaag (SEQ ID NO: 157)






R2 new:






CGTGCTGACATAAAATAATATTTTTAATTTTTTTAGTGTACTTT






(SEQ ID NO: 158)














Oligo “F1new” was designed to direct amplification from the 5′ end of the 14 kDa gene and hybridize to the 3′ end of the 44 kDa gene. Oligo “R1new” was designed to direct amplification from the 3′ end of the 14 kDa gene. This primer was designed with two stop codons in order to ensure termination of translation. It was also designed with a KpnI site for directional cloning into a plasmid expression vector for


Pseudomonas fluorescens


. Oligo “F2new” was designed to direct amplification from the 5′ end of the 44 kDa gene. It also includes a ribosome binding sequence and a SpeI cloning site. Oligo “R2new” was designed to direct amplification from the 3′ end of the 44 kDa gene and hybridize to the 5′ end of the 14 kDa gene.




The two genes were first independently amplified from PS149B1 genomic DNA; the 14 kDa gene using “F1new” and “R1new,” and the 44 kDa gene using “F2new” and “R2new.” The products were then combined in one PCR tube and amplified together using “R1new” and “F2new.” At this point, Herculase™ Enhanced Polymerase Blend (Stratagene, La Jolla, Calif.) was used at a 48° C. annealing temperature to amplify a 1.5 kb DNA fragment containing the gene fusion. This DNA fragment was subsequently digested using KpnI and SpeI, fractionated on agarose gels, and purified by electroelution. The plasmid vector was also digested with KpnI and SpeI, fractionated on agarose gels, purified by electroelution and treated with phosphatase. The vector and insert were then ligated together overnight at 14° C. Ligated DNA fragments were transformed into MB214


P.f


. cells by electroporation and selection overnight on LB+ tetracycline (30 ug/mL) plates. Strains containing the gene fusion were identified by diagnostic PCR and sequenced for verification of successful gene splicing. One representative strain containing the cloned gene fusion was designated MR1607; the recombinant plasmid was designated pMYC2475.




A subculture of MR1607 was deposited in the permanent collection of the Patent Culture Collection (NRRL), Regional Research Center, 1815 North University Street, Peoria, Ill. 61604 USA on Aug. 8, 2000. The accession number is NRRL B-30332. MR1607 was grown and protein production was verified by SDS-PAGE and immunoblotting. A protein band at ˜58 kDa representing the 44 kDa+14 kDa fusion product was identified when western blots were probed with antibodies specific to either the 14 kDa toxin or the 44 kDa toxin.




The sequence of the 58 kDa fusion protein is provided in SEQ ID NO:159. The DNA sequence for the gene fusion is provided in SEQ ID NO:160.




EXAMPLE 23




Binary Homologue Mixing Study




Growth of Homologue Strains.




Four strains were selected, one from each major binary toxin family—149B1 , 80JJ1, 201L3, and 167H2. In order to reduce time spent purifying individual toxin proteins, the following


Pseudomonas fluorescens


(


P.f


.) clones were grown instead: MR1253 (14 kDa of 149B1) and MR1256 (44 kDa of 149B1). Similarly,


B.t


. clones MR541 (expressing 14 kDa of 80JJ1), and MR542 (44 kDa of 80JJ1) were used.


B.t


. strains were grown as described in Example 1. Pellets were washed 3× with water and stored at −20° C. until needed.


P.f


. strains were grown in 10 L batches in Biolafitte fermenters using standard procedures. Pellets were stored at −80° C. until needed.




Extraction & Purification of Toxins.




Purification of 167H2, MR541, MR542, 201L3. Extractions of cell pellets were done using 100 mM sodium citrate buffer at pH's ranging from 3.0 to 5.5. In a typical extraction, pellets were extracted with a buffer volume {fraction (1/10)} to ⅓× of the original culture volume. Pellets were suspended in the buffer and placed on a rocking platform at 4° C. for periods of time ranging from 2.5 hours to overnight. The extracts were centrifuged and supernatants were retained. This procedure was repeated with each strain until at least approximately 10 mg of each protein were obtained. SDS-PAGE confirmed the presence/absence of protein toxins in the extracts through use of the NuPAGE Bis/Tris gel system (Invitrogen). Samples were prepared according to the manufacturers instructions and were loaded onto 4-12% gels and the electrophoretograms were developed with MES running buffer. The exception to this procedure was the sample prep of all 201L3 samples. These samples were prepared by diluting ½× with BioRad's Laemmli sample buffer and heating at 95° C. for 4 minutes. Protein quantitation was done by laser scanning gel densitometry with BSA as a standard (Molecular Dynamics Personal Densitometer SI). Extracts were clarified by filtration through a 0.2 μm membrane filter and stored at 4° C.




Purification of MR1253 & MR1256. The recombinant proteins MR1253 and MR 1256, corresponding to the 14 and 44 kDa proteins of 149B1 respectively, were prepared as solubilized inclusions. Inclusion bodies were prepared using standard procedures. The inclusion bodies were solubilized in 1 mM EDTA, 50 mM sodium citrate, pH 3.5.




Purification of individual toxins, 167H2 & 201L3. All extracts known to contain either the 14, the 44 kDa, or both were combined. This combined extract was dialyzed against 100 mM sodium citrate, 150 mM NaCl, pH 4. Dialysis tubing was from Pierce (Snakeskin 10 k MWCO). Samples were usually dialyzed for approximately 6 hours and then again overnight in fresh buffer.




Extracts were then concentrated with either Centriprep 10 or Centricon Plus-20 (Biomax—5, 5000 NMWL) centrifugal filter devices (Millipore), quantitated for both the 14 kDa and 44 kDa proteins, and subjected to gel filtration chromatography.




In preparation for chromatography, all samples and buffers were filtered through a 0.2 μm filter and degassed. Samples were then applied to a HiPrep 26/60 Sephacryl S-100 gel filtration column which had been equilibrated with two bed volumes of the separation buffer, 100 mM sodium citrate, 150 mM NaCl, pH 4.0. Sample volumes ranged from 5-10 ml. An AKTA purifier 100 FPLC system (Amersham Pharmacia) controlled the runs. Chromatography was done at ambient temperature. Buffer flow through the column during the run was maintained at 0.7 ml/min. Proteins were detected by monitoring UV absorbance at 280 nm. Fractions were collected and stored at 4° C. Fractions containing either the 14 or 44 kDa protein were pooled and checked for purity by SDS-PAGE as described above.




For 167H2 samples, two large peaks were detected and were well separated from each other at the baseline. SDS-PAGE of fractions showed each peak represented one of the protein toxins.




In the 201L3 sample, three well defined peaks and one shoulder peak were detected. SDS-PAGE revealed that the first peak represented a 100 kDa protein plus an 80 kDa protein. The second peak represented the 44 kDa protein, while the shoulder peak was a 40 kDa protein. The third peak was the 14 kDa protein. Fractions with the 44 kDa from both samples were combined as were all fractions containing the 14 kDa.




The 149B1 proteins had been obtained individually from


Pf


clones MR1253 and MR1256 and, therefore, further purification was not necessary. Similarly, the 80JJ1 recombinants, MR541 and MR542 yielded the individual 14 and 44 kDa proteins thereby obviating further purification.




Sample Preparation for wCRW LC


50


Bioassay.




Dialysis. Samples of individual binary toxin proteins were dialyzed against 6 L of 20 mM sodium citrate, pH 4.0. The first dialysis proceeded for several hours, the samples were transferred to fresh buffer and alowed to dialyze overnight. Finally, the samples were transferred to fresh buffer and dialyzed several more hours. Sources of the protein samples were either the pooled gel-filtration fractions (167H2, 201L3), pellet extracts (MR541, MR542), or inclusion pellet extracts (MR1253, MR1256). All samples were filtered through 0.2 um membranes to sterilize.




Concentration. Samples were concentrated with Centricon Plus-20 (Biomax—5, 5000 NMWL) centrifugal filter devices (Millipore).




Quantitation. Samples were quantitated for protein as above. To meet the requirements of the LC


50


bioassay, a minimum of 6.3 mg of each toxin protein were needed at a concentration range of 0.316-1.36 mg/ml for the various combinations. If necessary, samples were concentrated as above, or were diluted with buffer (20 mM sodium citrate, pH 4.0) and requantitated.




Mixing of binaries/LC


50


bioassay. For each of the four strains, the 14 kDa was combined with an amount the 44 kDa of each strain to give a 1/1 mass ratio. The top dose was 50 ug/cm


2


for the mixtures, with the exception of mixtures with the 14 kDa protein of 203J1. Top doses of mixtures with this protein were only 44 ug/cm


2


. For controls, each protein was submitted individually, as was the extract buffer, 20 mM sodium citrate, pH 4.0. Native combinations were also tested (i.e. 14 kDa+44 kDa of 149B1). All toxin combinations and buffer controls were evaluated three times by bioassay against Western corn rootworm, while individual toxins were tested once.




The results are reported below in Table 15 (LC


50


Results for Toxin Combinations) and Table 16 (Comparison of Potencies of Strains to 149B1).
















TABLE 15











Toxin combination




Top load, ul/well




LC


50


(ug/cm


2


)




























80JJ1 14 + 80JJ1 44




96




28 (19-44 C.I.)







167H2 44




159




>Top dose







201L3 44




172




No dose response







149B1 44




78




No dose response







167H2 14 + 167H2 44




161




19 (13-27 C.I.)







80JJ1 44




97




No dose response







201L3 44




174




14 (10-22 C.I.)







149B1 44




80




No dose response







201L3 14 + 201L3 44




193




No dose response







80JJ1 44




116




No dose response







167H2 44




180




No dose response







149B1 44




99




No dose response







149B1 14 + 149B1 44




45




10 (7-15 C.I.)







80JJ1 44




63




11 (8-16 C.I.)







167H2 44




126




8 (6-11 C.I.)







201L3 44




139




18 (13-27 C.I.)























TABLE 16











Comparison of potencies of strains to 149B1














Toxin combination




Relative potency











149B1 14 + 149B1 44




To which all others are compared







149B1 14 + 80JJ1 44




0.9







149B1 14 + 167H2 44




1.3







149B1 14 + 201L3 44




0.5







80JJ1 14 + 80JJ1 44




0.4







167H2 14 + 167H2 44




0.5







167H2 14 + 201L3 44




0.7















The results are also displayed graphically in FIG.


3


.




Native combinations were highly active against Western corn rootworm, except for 201L3. However, the 44 kDa of 201L3 was active when combined with either the 14 kDa of 167H2 or 149B1. Other active combinations were the 149B1 14 kDa with either 80JJ1 or 167H2 44 kDa, with the latter appearing to be more active than the native 149B1 mixture. No dose response was noted for either the individual proteins, or the buffer and water controls.




EXAMPLE 24




Control of Southern Corn Rootworm With PS149B1 14-kDa Protein




A powder containing approximately 50% (wt/wt) of a 14-kDa δ-endotoxin, originally discovered in


Bacillus thuringiensis


strain PS149B1, was isolated from recombinant


Pseudomonas fluorescens


strain (MR1253). This powder was evaluated for insecticidal activity using the following procedure.




Artificial insect diet (R. I. Rose and J. M. McCabe (1973), “Laboratory rearing techniques for rearing corn rootworm,”


J. Econ. Entomol


. 66(2): 398-400) was dispensed at ˜0.5 mL/well into 128-well bioassay trays (C-D International, Pitman, N.J.) to produce a surface area of ˜1.5 cm2. Buffer (10-mM potassium phosphate, pH 7.5) suspensions of the 14-kDa protein powder were applied to the surface of the artificial insect diet at 50 μL/well, and the diet surface was allowed to dry. Buffer controls were also included in each test. A single neonate southern corn rootworn,


Diabrotica undecimpunctata howardi


, was placed in each well, and the wells were sealed with lids that were provided with the trays. The bioassays were held for 6 days at 28° C., after which time, the live larvae were weighed as a group for each treatment. Percent growth inhibition was calculated by subtracting the weight of live insects from each treatment from the weight of live, control insects, and then dividing by the control weight. This result was multiplied by 100 to convert the number to a percent. Growth inhibition was calculated for each of 5 tests that each contained 16 insects per treatment, and the growth inhibition was averaged across tests.




Results demonstrated that the 14-kDa protein inhibited growth of southern corn rootworms in a concentration-dependent manner. Table 17 shows southern corn rootworn growth inhibition with PS149B1 14-kDa protein.














TABLE 17









Treatment




Concentration in μg ai/cm


2






% Growth Inhibition











14-kDa Protein




1




32






14-kDa Protein




3




55






14-kDa Protein




9




78











ai = active ingredient













EXAMPLE 25




Control of European Corn Borer and Corn Earworm With PS149B1 Binary Toxin




A powder containing 54% of a 14-kDa δ-endotoxin, and another powder containing 37% of a 44-kDa δ-endotoxin, both originally discovered in


Bacillus thuringiensis


strain PS149B1, were isolated from recombinant


Pseudomonas fluorescens


strains MR1253 and MR1256, respectively. Mixtures of these powders were evaluated for insecticidal activity using the following procedure.




Artificial insect diet (R. I. Rose and J. M. McCabe (1973), “Laboratory rearing techniques for rearing corn rootworm,”


J. Econ. Entomol


. 66(2): 398-400) was dispensed at ˜0.5 mL/well into 128-well bioassay trays (C-D International, Pitman, N.J.) to, produce a surface area of ˜1.5 cm2. Buffer (10-mM potassium phosphate, pH 7.5) suspensions of the protein powders were mixed, and were then applied to the surface of the artificial insect diet at 50 μL/well. The diet surface was allowed to dry. Buffer controls were also included in each test. A single neonate larvae was placed in each well, and the wells were sealed with lids that were provided with the trays. Tests were conducted with European corn borer,


Ostrinia nubilalis


, and corn earworm,


Helicoverpa zea


(both are lepidopterans). The bioassays were held for 6 days at 28° C., after which time, the live larvae were weighed as a group for each treatment. Percent growth inhibition was calculated by subtracting the weight of live insects in each treatment from the weight of live, control insects, and then dividing by the control weight. This result was multiplied by 100 to convert the number to a percent. Growth inhibition was calculated for each of 4 tests that each contained 14 to 16 insects per treatment, and the growth inhibition was averaged across tests.




Results demonstrated that the 14-kDa protein inhibited growth of European corn borers and corn earworms in a concentration-dependent manner. Table 18 shows corn earworm (CEW) and European corn borer (ECB) growth inhibition with PS149B1 protein mixtures.














TABLE 18











14-kDa protein + 44-kDa Protein




% Growth Inhibition














Concentration in μg ai/cm


2






CEW




ECB









3.7 + 11 




42




59






11 + 33




57




77






 33 + 100




61




89











ai = active ingredient













EXAMPLE 26




Further Characterization of the 45 kDa Proteins and Primer Design for Identifying Additional Polynucleotides and Proteins




The subject invention includes not only the specifically exemplified sequences. Portions of the subject genes and toxins can be used to identify other related genes and toxins. Thus, the subject invention includes polynucleotides that encode proteins or polypeptides comprising at least ten contiguous amino acids, for example, of any of the binary-type proteins or polypeptides included in the attached sequence listing and described herein. Other embodiments include polynucleotides that encode, for example, at least 20, 30, 40, 50, 60, 70, 80, 90, and 100 contiguous amino acids of a protein exemplified herein; these numbers also apply similarly to contiguous nucleotides of an exemplified polynucleotide. The proteins encoded by such polynucleotides are included in the subject invention. Likewise, polynucleotides comprising contiguous nucleotides (that code for proteins or polypeptides comprising peptides of these approximate sizes) are included in the subject invention.




While still very different, the “closest” toxins to those of the subject invention are believed to be the 51 and 42 kDa mosquitocidal proteins of


Bacillus sphaericus


. Attached as

FIGS. 4 and 5

are protein alignments and nucleotide sequences alignments of the 51 and 42 kDa sphaericus toxins and genes and the 45 kDa 149B1 toxin and gene.




Two blocks of sequences are highlighted in the nucleotide alignment to which primers could be made. An exemplary PCR primer pair is included below, and in 5′-3′ orientation (45 kD3′rc is shown as the complement). These primers have been successfully used to identify additional members of the 45 kDa binary family. Fully redundant sequences and a prophetic pair are also included below.


















45kD5′:




GAT RAT RAT CAA TAT ATT ATT AC







(SEQ ID NO: 161).






45kD3′rc:




CAA GGT ART AAT GTC CAT CC (SEQ ID NO: 162).














The sequences would be useful as both the sequence written and as the reverse complement (03 and 04 are complementary to 45 kD3′rc, the exemplified reverse primer).


















45kD5′01:




GAT GATGrTmrAk wwATTATTrC A (SEQ ID NO: 163).






45kD5′02:




GAT GATGrTmrAT ATATTATTrC A (SEQ ID NO: 164).






45kD3′03:




GGAwG krCdyTwdTm CCwTGTAT (SEQ ID NO: 165).






45kD3′04:




GGAwG kACryTAdTA CCTTGTAT (SEQ ID NO: 166).














Regarding the manner in which the sphaericus toxins were identified, a BLAST (Altschul et al. (1997), “Gapped BLAST and PSI-BLAST: a new generation of protein database search programs,” Nucleic Acids Res. 25:3389-3402) database search using the 149B1 45 kDa protein found matches to the 42 kDa


B. sphaericus


crystal inclusion protein (expectation score 3*10


−4


) and the 51 kDa


B. sphaericus


crystal inclusion protein (expectation score 3*10


−9


).




An alignment of the 45 kDa 149B1 peptide sequence to the 42 kDa


B. sphaericus


crystal inclusion protein results in an alignment having 26% identity over 325 residues. The alignment score is 27.2 sd above the mean score of 100 randomized alignments. A similar analysis of the 45 kDa 149B1 peptide sequence to the 42 kDa


B. sphaericus


crystal inclusion protein results in an alignment having 29% identity over 229 residues. The alignment score is 23.4 sd above the mean score of 100 randomized alignments. Alignment scores>10 sd above the mean of random alignments have been considered significant (Lipman, D. J. and Pearson, W. R. (1985), “Rapid and sensitive similarity searches,”


Science


227:1435-1441; Doolittle, R. F. (1987),


Of URFs and ORFs: a primer on how to analyze derived amino acid sequences


, University Science Books, Mill Valley, Calif.).




For reference, the structurally similar Cry1Aa, Cry2Aa and Cry3Aa protein sequences were compared in the same way. Cry2Aa vs. Cry1Aa and Cry2Aa vs. Cry3Aa share 29% and 27% identity over 214 and 213 residues, respectively, with alignment scores 32.2 sd and 29.5 sd above the mean score of 100 randomized alignments. An alignment of the 149B1 45 kDa protein sequence and the Cry2Aa protein sequence resulted in an alignment score within 1 sd of the mean of 100 randomized alignments.




The following comparisons are also noted:



















TABLE 19














%




%




Average






Comparison




Quality




Length




Ratio




Gaps




Similarity




Identity




Quality*






























ps149b1-45.pep ×




189




325




0.612




12




35.135




26.351




39.4 ± 5.5






s07712






ps149b1-45.pep ×




161




229




0.742




9




36.019




28.910




39.3 ± 5.2






07711






cry2aa1.pep ×




182




214




0.888




6




37.688




28.643




43.5 ± 4.3






cry1aa1.pep






cry3aa1.pep ×




187




213




0.926




6




40.500




27.000




42.3 ± 4.9






cry2aa1.pep






ps149b1-45.pep ×




40




28




1.429




0




42.857




35.714




41.6 ± 5.6






cry2aa1.pep











*based on 100 randomizations













For further comparison purposes, and for further primer design, the following references are noted:




Oei et al. (1992), “Binding of purified


Bacillus sphaericus


binary toxin and its deletion derivatives to Culex quinquefasciatus gut: elucidation of functional binding domains,”


Journal of General Microbiology


138(7): 1515-26.




For the 51 kDa: 35-448 is active; 45-448 is not; 4-396 is active; 4-392 is not.




For the 42 kDa: 18-370 is active, 35-370 is not; 4-358 is active; 4-349 is not.




The work was done with GST fusions purified and cleaved with thrombin. All truncations were assayed with==of other intact subunit. All deletions had some loss of activity. P51deltaC56 binds, but doesn't internalize 42. P51delta N45 doesn't bind. Only 42 kDa+51 kDa are internalized. Both N-terminal and C-terminal non-toxic 42 kDa proteins failed to bind the 51 kDa protein or 51 kDa-receptor complex.




Davidson et al. (1990), “Interaction of the


Bacillus sphaericus


mosquito larvicidal proteins,”


Can. J. Microbiol


. 36(12):870-8. N-termini of SDS-PAGE purified proteins obtained from


B. sphaericus


. S29 and N31 of 51 kDa and S9 of 42 kDa in 68-74 kDa complexes (unreduced). S9 and S29 of 51 and N31 of 42 from 51 kDa band (unreduced). In reduced gels the 45 kDa band had S29 and N31 of the 51 kDa and the 39 kDa band contained S9 of the 42 kDa protein.




Baumann et al. (1988), “Sequence analysis of the mosquitocidal toxin genes encoding 51.4- and 41.9-kilodalton proteins from


Bacillus sphaericus


2362 and 2297


,” J. Bacteriol


. 17:2045-2050. N-termini of 41.9 kDa at D5 from


B. sphaericus protease


and I11 from chymotrypsin; C-terminus following R349 with trypsin. Regions of enhanced similarity were identified that correspond to many of those above. Similar sequence blocks A through D between the 51 and 42 kDa proteins.




In summary, the sphaericus toxins discussed above are not meant to be included in the scope of the subject invention (in fact, they are specifically excluded). In that regard, divergent contiguous sequences, as exemplified in the alignments (

FIGS. 4 and 5

) discussed above, can be used as primers to identify unique toxins that are suggested but not specifically exemplified herein. However, the conserved contiguous sequences, as shown in the alignments, can also be used according to the subject invention to identify further novel 15/45 kDa-type binary toxins (active against corn rootworm and other pests).




EXAMPLE 27




Insertion and Expression of Toxin Genes in Plants




One aspect of the subject invention is the transformation of plants with polynucleotides of the subject invention that express proteins of the subject invention. The transformed plants are resistant to attack by the target pest.




The novel corn rootworm-active genes described here can be optimized for expression in other organisms. For example, maize optimized gene sequences encoding the 14 and 44 kDa PS80JJ1 toxins are disclosed in SEQ ID NO:44 and SEQ ID NO:45, respectively.




Genes encoding pesticidal toxins, as disclosed herein, can be inserted into plant cells using a variety of techniques which are well known in the art. For example, a large number of cloning vectors comprising a replication system in


E. coli


and a marker that permits selection of the transformed cells are available for preparation for the insertion of foreign genes into higher plants. The vectors comprise, for example, pBR322, pUC series, M13mp series, pACYC184, etc. Accordingly, the sequence encoding the


B.t


. toxin can be inserted into the vector at a suitable restriction site. The resulting plasmid is used for transformation into


E. coli


. The


E. coli


cells are cultivated in a suitable nutrient medium, then harvested and lysed. The plasmid is recovered. Sequence analysis, restriction analysis, electrophoresis, and other biochemical-molecular biological methods are generally carried out as methods of analysis. After each manipulation, the DNA sequence used can be cleaved and joined to the next DNA sequence. Each plasmid sequence can be cloned in the same or other plasmids. Depending on the method of inserting desired genes into the plant, other DNA sequences may be necessary. If, for example, the Ti or Ri plasmid is used for the transformation of the plant cell, then at least the right border, but often the right and the left border of the Ti or Ri plasmid T-DNA, has to be joined as the flanking region of the genes to be inserted.




The use of T-DNA for the transformation of plant cells has been intensively researched and sufficiently described in EP 120 516; Hoekema (1985) In:


The Binary Plant Vector System


, Offset-durkkerij Kanters B. V., Alblasserdam, Chapter 5; Fraley et al.,


Crit. Rev. Plant Sci


. 4:1-46; and An et al. (1985)


EMBO J


. 4:277-287.




Once the inserted DNA has been integrated in the genome, it is relatively stable there and, as a rule, does not come out again. It normally contains a selection marker that confers on the transformed plant cells resistance to a biocide or an antibiotic, such as kanamycin, G 418, bleomycin, hygromycin, or chloramphenicol, inter alia. The individually employed marker should accordingly permit the selection of transformed cells rather than cells that do not contain the inserted DNA.




A large number of techniques are available for inserting DNA into a plant host cell. Those techniques include transformation with T-DNA using


Agrobacterium tumefaciens


or


Agrobacterium rhizogenes


as transformation agent, fusion, injection, biolistics (microparticle bombardment), or electroporation as well as other possible methods. If Agrobacteria are used for the transformation, the DNA to be inserted has to be cloned into special plasmids, namely either into an intermediate vector or into a binary vector. The intermediate vectors can be integrated into the Ti or Ri plasmid by homologous recombination owing to sequences that are homologous to sequences in the T-DNA. The Ti or Ri plasmid also comprises the vir region necessary for the transfer of the T-DNA. Intermediate vectors cannot replicate themselves in Agrobacteria. The intermediate vector can be transferred into


Agrobacterium tumefaciens


by means of a helper plasmid (conjugation). Binary vectors can replicate themselves both in


E. coli


and in Agrobacteria. They comprise a selection marker gene and a linker or polylinker which are framed by the right and left T-DNA border regions. They can be transformed directly into Agrobacteria (Holsters et al. [1978


] Mol. Gen. Genet


. 163:181-187). The Agrobacterium used as host cell is to comprise a plasmid carrying a vir region. The vir region is necessary for the transfer of the T-DNA into the plant cell. Additional T-DNA may be contained. The bacterium so transformed is used for the transformation of plant cells. Plant explants can advantageously be cultivated with


Agrobacterium tumefaciens


or


Agrobacterium rhizogenes


for the transfer of the DNA into the plant cell. Whole plants can then be regenerated from the infected plant material (for example, pieces of leaf, segments of stalk, roots, but also protoplasts or suspension-cultivated cells) in a suitable medium, which may contain antibiotics or biocides for selection. The plants so obtained can then be tested for the presence of the inserted DNA. No special demands are made of the plasmids in the case of injection and electroporation. It is possible to use ordinary plasmids, such as, for example, pUC derivatives.




The transformed cells grow inside the plants in the usual manner. They can form germ cells and transmit the transformed trait(s) to progeny plants. Such plants can be grown in the normal manner and crossed with plants that have the same transformed hereditary factors or other hereditary factors. The resulting hybrid individuals have the corresponding phenotypic properties.




In a preferred embodiment of the subject invention, plants will be transformed with genes wherein the codon usage has been optimized for plants. See, for example, U.S. Pat. No. 5,380,831, which is hereby incorporated by reference. Also, advantageously, plants encoding a truncated toxin will be used. The truncated toxin typically will encode about 55% to about 80% of the full length toxin. Methods for creating synthetic


B.t


. genes for use in plants are known in the art.




EXAMPLE 28




Cloning of


B.t


. Genes Into Insect Viruses




A number of viruses are known to infect insects. These viruses include, for example, baculoviruses and entomopoxviruses. In one embodiment of the subject invention, genes encoding the insecticidal toxins, as described herein, can be placed within the genome of the insect virus, thus enhancing the pathogenicity of the virus. Methods for constructing insect viruses which comprise


B.t


. toxin genes are well known and readily practiced by those skilled in the art. These procedures are described, for example, in Merryweather et al. (Merryweather, A. T., U. Weyer, M. P. G. Harris, M. Hirst, T. Booth, R. D. Possee (1990)


J. Gen. Virol


. 71:1535-1544) and Martens et al. (Martens, J. W. M., G. Honee, D. Zuidema, J. W. M. van Lent, B. Visser, J. M. Vlak (1990)


Appl. Environmental Microbiol


. 56(9):2764-2770).




All patents, patent applications, provisional applications, and publications referred to or cited herein are incorporated by reference in their entirety to the extent they are not inconsistent with the explicit teachings of this specification.




It should be understood that the examples and embodiments described herein are for illustrative purposes only and that various modifications or changes in light thereof will be suggested to persons skilled in the art and are to be included within the spirit and purview of this application and the scope of the appended claims.







166




1


5


PRT


Bacillus thuringiensis



1
Met Leu Asp Thr Asn
1 5




2


25


PRT


Bacillus thuringiensis



2
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu
20 25




3


24


PRT


Bacillus thuringiensis



3
Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Thr Arg His Thr Leu
1 5 10 15
Gln Leu Glu Ala Lys Thr Lys Leu
20




4


25


PRT


Bacillus thuringiensis



4
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu
20 25




5


50


PRT


Bacillus thuringiensis




MISC_FEATURE




(35)




Undetermined amino acid





5
Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His Thr
1 5 10 15
Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg Thr
20 25 30
Ser Pro Xaa Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala Glu
35 40 45
Ser Asn
50




6


25


PRT


Bacillus thuringiensis



6
Met Leu Asp Thr Asn Lys Ile Tyr Glu Ile Ser Asn Tyr Ala Asn Gly
1 5 10 15
Leu His Ala Ala Thr Tyr Leu Ser Leu
20 25




7


25


PRT


Bacillus thuringiensis



7
Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His Thr
1 5 10 15
Leu Gln Leu Glu Asp Lys Thr Lys Leu
20 25




8


29


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide probe for gene encoding PS80JJ1 44.3 kDa toxin;
forward primer for PS149B1 and PS167H2






8
atgntngata cnaataaagt ntatgaaat 29




9


26


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer for PS149B1 and PS167H2






9
ggattatcta tctctgagtg ttcttg 26




10


1158


DNA


Bacillus thuringiensis



10
atgttagata ctaataaagt ttatgaaata agcaatcttg ctaatggatt atatacatca 60
acttatttaa gtcttgatga ttcaggtgtt agtttaatga gtaaaaagga tgaagatatt 120
gatgattaca atttaaaatg gtttttattt cctattgata ataatcaata tattattaca 180
agctatggag ctaataattg taaagtttgg aatgttaaaa atgataaaat aaatgtttca 240
acttattctt caacaaactc tgtacaaaaa tggcaaataa aagctaaaga ttcttcatat 300
ataatacaaa gtgataatgg aaaggtctta acagcaggag taggtcaatc tcttggaata 360
gtacgcctaa ctgatgaatt tccagagaat tctaaccaac aatggaattt aactcctgta 420
caaacaattc aactcccaca aaaacctaaa atagatgaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat aaatcctaaa acaactcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgattcaaaa atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atataaatac tggaatctag caaaaggaag taatgtatct 660
ttacttccac atcaaaaaag atcatatgat tatgaatggg gtacagaaaa aaatcaaaaa 720
acaactatta ttaatacagt aggattgcaa attaatatag attcaggaat gaaatttgaa 780
gtaccagaag taggaggagg tacagaagac ataaaaacac aattaactga agaattaaaa 840
gttgaatata gcactgaaac caaaataatg acgaaatatc aagaacactc agagatagat 900
aatccaacta atcaaccaat gaattctata ggacttctta tttatacttc tttagaatta 960
tatcgatata acggtacaga aattaagata atggacatag aaacttcaga tcatgatact 1020
tacactctta cttcttatcc aaatcataaa gaagcattat tacttctcac aaaccattcg 1080
tatgaagaag tagaagaaat aacaaaaata cctaagcata cacttataaa attgaaaaaa 1140
cattatttta aaaaataa 1158




11


385


PRT


Bacillus thuringiensis



11
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Ser Lys Lys Asp Glu Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asp Ser Ser Tyr Ile Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Val Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Phe Pro
115 120 125
Glu Asn Ser Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Glu Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Asn Pro Lys Thr Thr Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Ser Lys Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Lys Tyr Trp Asn Leu Ala Lys Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Arg Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Lys Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Leu Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Asp Ile Lys
260 265 270
Thr Gln Leu Thr Glu Glu Leu Lys Val Glu Tyr Ser Thr Glu Thr Lys
275 280 285
Ile Met Thr Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Pro Met Asn Ser Ile Gly Leu Leu Ile Tyr Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Thr Glu Ile Lys Ile Met Asp Ile Glu Thr Ser
325 330 335
Asp His Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Lys Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Lys Ile Pro Lys His Thr Leu Ile Lys Leu Lys Lys His Tyr Phe Lys
370 375 380
Lys
385




12


834


DNA


Bacillus thuringiensis



12
ggactatatg cagcaactta tttaagttta gatgattcag gtgttagttt aatgaataaa 60
aatgatgatg atattgatga ttataactta aaatggtttt tatttcctat tgatgatgat 120
caatatatta ttacaagcta tgcagcaaat aattgtaaag tttggaatgt taataatgat 180
aaaataaatg tttcgactta ttcttcaaca aattcaatac aaaaatggca aataaaagct 240
aatggttctt catatgtaat acaaagtgat aatggaaaag tcttaacagc aggaaccggt 300
caagctcttg gattgatacg tttaactgat gaatcctcaa ataatcccaa tcaacaatgg 360
aatttaactt ctgtacaaac aattcaactt ccacaaaaac ctataataga tacaaaatta 420
aaagattatc ccaaatattc accaactgga aatatagata atggaacatc tcctcaatta 480
atgggatgga cattagtacc ttgtattatg gtaaatgatc caaatataga taaaaatact 540
caaattaaaa ctactccata ttatatttta aaaaaatatc aatattggca acgagcagta 600
ggaagtaatg tagctttacg tccacatgaa aaaaaatcat atacttatga atggggcaca 660
gaaatagatc aaaaaacaac aattataaat acattaggat ttcaaatcaa tatagattca 720
ggaatgaaat ttgatatacc agaagtaggt ggaggtacag atgaaataaa aacacaacta 780
aatgaagaat taaaaataga atatagtcat gaaactaaaa taatggaaaa atat 834




13


278


PRT


Bacillus thuringiensis



13
Gly Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser
1 5 10 15
Leu Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp
20 25 30
Phe Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala
35 40 45
Ala Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val
50 55 60
Ser Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala
65 70 75 80
Asn Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr
85 90 95
Ala Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser
100 105 110
Ser Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile
115 120 125
Gln Leu Pro Gln Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro
130 135 140
Lys Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu
145 150 155 160
Met Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile
165 170 175
Asp Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys
180 185 190
Tyr Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro
195 200 205
His Glu Lys Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln
210 215 220
Lys Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser
225 230 235 240
Gly Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile
245 250 255
Lys Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser His Glu Thr
260 265 270
Lys Ile Met Glu Lys Tyr
275




14


829


DNA


Bacillus thuringiensis



14
acatgcagca acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga 60
tgatgatatt gatgactata atttaaggtg gtttttattt cctattgatg ataatcaata 120
tattattaca agctacgcag cgaataattg taaggtttgg aatgttaata atgataaaat 180
aaatgtttca acttattctt caacaaactc gatacagaaa tggcaaataa aagctaatgc 240
ttcttcgtat gtaatacaaa gtaataatgg gaaagttcta acagcaggaa ccggtcaatc 300
tcttggatta atacgtttaa cggatgaatc accagataat cccaatcaac aatggaattt 360
aactcctgta caaacaattc aactcccacc aaaacctaca atagatacaa agttaaaaga 420
ttaccccaaa tattcacaaa ctggcaatat agacaaggga acacctcctc aattaatggg 480
atggacatta ataccttgta ttatggtaaa tgatcccaat atagataaaa acactcaaat 540
caaaactact ccatattata ttttaaaaaa atatcaatat tggcaacaag cagtaggaag 600
taatgtagct ttacgtccgc atgaaaaaaa atcatatgct tatgagtggg gtacagaaat 660
agatcaaaaa acaactatca ttaatacatt aggatttcag attaatatag attcgggaat 720
gaaatttgat ataccagaag taggtggagg tacagatgaa ataaaaacac aattaaacga 780
agaattaaaa atagaatata gccgtgaaac caaaataatg gaaaaatat 829




15


276


PRT


Bacillus thuringiensis



15
His Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu Met
1 5 10 15
Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Arg Trp Phe Leu
20 25 30
Phe Pro Ile Asp Asp Asn Gln Tyr Ile Ile Thr Ser Tyr Ala Ala Asn
35 40 45
Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser Thr
50 55 60
Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn Ala
65 70 75 80
Ser Ser Tyr Val Ile Gln Ser Asn Asn Gly Lys Val Leu Thr Ala Gly
85 90 95
Thr Gly Gln Ser Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Pro Asp
100 105 110
Asn Pro Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln Leu
115 120 125
Pro Pro Lys Pro Thr Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys Tyr
130 135 140
Ser Gln Thr Gly Asn Ile Asp Lys Gly Thr Pro Pro Gln Leu Met Gly
145 150 155 160
Trp Thr Leu Ile Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp Lys
165 170 175
Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr Gln
180 185 190
Tyr Trp Gln Gln Ala Val Gly Ser Asn Val Ala Leu Arg Pro His Glu
195 200 205
Lys Lys Ser Tyr Ala Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys Thr
210 215 220
Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly Met
225 230 235 240
Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys Thr
245 250 255
Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser Arg Glu Thr Lys Ile
260 265 270
Met Glu Lys Tyr
275




16


7


PRT


Bacillus thuringiensis



16
Asp Ile Asp Asp Tyr Asn Leu
1 5




17


7


PRT


Bacillus thuringiensis



17
Trp Phe Leu Phe Pro Ile Asp
1 5




18


8


PRT


Bacillus thuringiensis



18
Gln Ile Lys Thr Thr Pro Tyr Tyr
1 5




19


6


PRT


Bacillus thuringiensis



19
Tyr Glu Trp Gly Thr Glu
1 5




20


21


DNA


Artificial Sequence




Description of Artificial Sequence primer





20
gatatngatg antayaaytt n 21




21


21


DNA


Artificial Sequence




Description of Artificial Sequence primer





21
tggtttttnt ttccnatnga n 21




22


24


DNA


Artificial Sequence




Description of Artificial Sequence primer





22
caaatnaaaa cnacnccata ttat 24




23


18


DNA


Artificial Sequence




Description of Artificial Sequence primer





23
tangantggg gnacagaa 18




24


24


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer






24
ataatatggn gtngttttna tttg 24




25


18


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer






25
ttctgtnccc cantcnta 18




26


18


DNA


Artificial Sequence




Description of Artificial Sequence forward
primer






26
ctcaaagcgg atcaggag 18




27


20


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer






27
gcgtattcgg atatgcttgg 20




28


386


PRT


Artificial Sequence




Description of Artificial Sequence generic
sequence representing new class of toxins






28
Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
1 5 10 15
Xaa Xaa Xaa Xaa Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Xaa Lys Xaa Asp Xaa Asp Ile Asp Asp Tyr Asn Leu Xaa Trp Phe
35 40 45
Leu Phe Pro Ile Asp Xaa Xaa Gln Tyr Ile Ile Thr Ser Tyr Xaa Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Xaa Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Xaa Gln Lys Trp Gln Ile Lys Ala Xaa
85 90 95
Xaa Ser Ser Tyr Xaa Ile Gln Ser Xaa Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Xaa Gly Gln Xaa Leu Gly Xaa Xaa Arg Leu Thr Asp Glu Xaa Xaa
115 120 125
Xaa Asn Xaa Asn Gln Gln Trp Asn Leu Thr Xaa Val Gln Thr Ile Gln
130 135 140
Leu Pro Xaa Lys Pro Xaa Ile Asp Xaa Lys Leu Lys Asp Xaa Pro Xaa
145 150 155 160
Tyr Ser Xaa Thr Gly Asn Ile Xaa Xaa Xaa Thr Xaa Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Xaa Pro Cys Ile Met Val Asn Asp Xaa Xaa Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Xaa Lys Lys Tyr
195 200 205
Xaa Tyr Trp Xaa Xaa Ala Xaa Gly Ser Asn Val Xaa Leu Xaa Pro His
210 215 220
Xaa Lys Xaa Ser Tyr Xaa Tyr Glu Trp Gly Thr Glu Xaa Xaa Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Xaa Gly Xaa Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Xaa Xaa Pro Glu Val Gly Gly Gly Thr Xaa Xaa Ile Lys
260 265 270
Thr Gln Leu Xaa Glu Glu Leu Lys Xaa Glu Tyr Ser Xaa Glu Thr Lys
275 280 285
Ile Met Xaa Lys Tyr Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
290 295 300
Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
305 310 315 320
Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
325 330 335
Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
340 345 350
Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
355 360 365
Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa
370 375 380
Xaa Xaa
385




29


28


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide probe






29
gngaagtnca tatngaaatn aataatac 28




30


2015


DNA


Bacillus thuringiensis



30
attaatttta tggaggttga tatttatgtc agctcgcgaa gtacacattg aaataaacaa 60
taaaacacgt catacattac aattagagga taaaactaaa cttagcggcg gtagatggcg 120
aacatcacct acaaatgttg ctcgtgatac aattaaaaca tttgtagcag aatcacatgg 180
ttttatgaca ggagtagaag gtattatata ttttagtgta aacggagacg cagaaattag 240
tttacatttt gacaatcctt atataggttc taataaatgt gatggttctt ctgataaacc 300
tgaatatgaa gttattactc aaagcggatc aggagataaa tctcatgtga catatactat 360
tcagacagta tctttacgat tataaggaaa atttataaaa actgtatttt ttactaaaat 420
accaaaaaat acatatttat tttttggtat tttctaatat gaaatatgaa ttataaaaat 480
attaataaaa aaggtgataa aaattatgtt agatactaat aaagtttatg aaataagcaa 540
tcttgctaat ggattatata catcaactta tttaagtctt gatgattcag gtgttagttt 600
aatgagtaaa aaggatgaag atattgatga ttacaattta aaatggtttt tatttcctat 660
tgataataat caatatatta ttacaagcta tggagctaat aattgtaaag tttggaatgt 720
taaaaatgat aaaataaatg tttcaactta ttcttcaaca aactctgtac aaaaatggca 780
aataaaagct aaagattctt catatataat acaaagtgat aatggaaagg tcttaacagc 840
aggagtaggt caatctcttg gaatagtacg cctaactgat gaatttccag agaattctaa 900
ccaacaatgg aatttaactc ctgtacaaac aattcaactc ccacaaaaac ctaaaataga 960
tgaaaaatta aaagatcatc ctgaatattc agaaaccgga aatataaatc ctaaaacaac 1020
tcctcaatta atgggatgga cattagtacc ttgtattatg gtaaatgatt caaaaataga 1080
taaaaacact caaattaaaa ctactccata ttatattttt aaaaaatata aatactggaa 1140
tctagcaaaa ggaagtaatg tatctttact tccacatcaa aaaagatcat atgattatga 1200
atggggtaca gaaaaaaatc aaaaaacaac tattattaat acagtaggat tgcaaattaa 1260
tatagattca ggaatgaaat ttgaagtacc agaagtagga ggaggtacag aagacataaa 1320
aacacaatta actgaagaat taaaagttga atatagcact gaaaccaaaa taatgacgaa 1380
atatcaagaa cactcagaga tagataatcc aactaatcaa ccaatgaatt ctataggact 1440
tcttatttat acttctttag aattatatcg atataacggt acagaaatta agataatgga 1500
catagaaact tcagatcatg atacttacac tcttacttct tatccaaatc ataaagaagc 1560
attattactt ctcacaaacc attcgtatga agaagtagaa gaaataacaa aaatacctaa 1620
gcatacactt ataaaattga aaaaacatta ttttaaaaaa taaaaaacat aatatataaa 1680
tgactgatta atatctctcg aaaaggttct ggtgcaaaaa tagtgggata tgaaaaaagc 1740
aaaagattcc taacggaatg gaacattagg ctgttaaatc aaaaagttta ttgataaaat 1800
atatctgcct ttggacagac ttctcccctt ggagagtttg tccttttttg accatatgca 1860
tagcttctat tccggcaatc atttttgtag ctgtttgcaa ggattttaat ccaagcatat 1920
ccgaatacgc tttttgataa ccgatgtctt gttcaatgat attgtttaat attttcacac 1980
gaattggcta ctgtgcggta tcctgtctcc tttat 2015




31


360


DNA


Bacillus thuringiensis



31
atgtcagctc gcgaagtaca cattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgtgacatat actattcaga cagtatcttt acgattataa 360




32


119


PRT


Bacillus thuringiensis



32
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Val Ser Leu Arg Leu
115




33


24


DNA


Artificial Sequence




Description of Artificial Sequence reverse
oligonucleotide primer






33
catgagattt atctcctgat ccgc 24




34


2230


DNA


Bacillus thuringiensis



34
actatgacaa tgattatgac tgctgatgaa ttagctttat caataccagg atattctaaa 60
ccatcaaata taacaggaga taaaagtaaa catacattat ttactaatat aattggagat 120
attcaaataa aagatcaagc aacatttggg gttgtttttg atccccctct taatcgtatt 180
tcaggggctg aagaatcaag taagtttatt gatgtatatt atccttctga agatagtaac 240
cttaaatatt atcaatttat aaaagtagca attgattttg atattaatga agattttatt 300
aattttaata atcatgacaa tatagggata tttaattttg ttacacgaaa ttttttatta 360
aataatgaaa atgattaata aaaaatttaa tttgtataat atgtttattt tttgaaaatt 420
gaatgcatat attaatcgag tatgtgtaat aaattttaat tttatggagg ttgatattta 480
tgtcagcacg tgaagtacac attgatgtaa ataataagac aggtcataca ttacaattag 540
aagataaaac aaaacttgat ggtggtagat ggcgaacatc acctacaaat gttgctaatg 600
atcaaattaa aacatttgta gcagaatcac atggttttat gacaggtaca gaaggtacta 660
tatattatag tataaatgga gaagcagaaa ttagtttata ttttgacaat ccttattcag 720
gttctaataa atatgatggg cattccaata aaaatcaata tgaagttatt acccaaggag 780
gatcaggaaa tcaatctcat gttacgtata ctattcaaac tgtatcttca cgatatggga 840
ataattcata aaaaaatatt tttttttacg aaaataccaa aaaaattttt ttggtatttt 900
ctaatataat tcataaatat tttaataata aaattataag aaaaggtgat aaatattatg 960
ttagatacta ataaaattta tgaaataagt aattatgcta atggattaca tgcagcaact 1020
tatttaagtt tagatgattc aggtgttagt ttaatgaata aaaatgatga tgatattgat 1080
gactataatt taaggtggtt tttatttcct attgatgata atcaatatat tattacaagc 1140
tacgcagcga ataattgtaa ggtttggaat gttaataatg ataaaataaa tgtttcaact 1200
tattcttcaa caaactcgat acagaaatgg caaataaaag ctaatgcttc ttcgtatgta 1260
atacaaagta ataatgggaa agttctaaca gcaggaaccg gtcaatctct tggattaata 1320
cgtttaacgg atgaatcacc agataatccc aatcaacaat ggaatttaac tcctgtacaa 1380
acaattcaac tcccaccaaa acctacaata gatacaaagt taaaagatta ccccaaatat 1440
tcacaaactg gcaatataga caagggaaca cctcctcaat taatgggatg gacattaata 1500
ccttgtatta tggtaaatga tccaaatata gataaaaaca ctcaaatcaa aactactcca 1560
tattatattt taaaaaaata tcaatattgg caacaagcag taggaagtaa tgtagcttta 1620
cgtccgcatg aaaaaaaatc atatgcttat gagtggggta cagaaataga tcaaaaaaca 1680
actatcatta atacattagg atttcagatt aatatagatt cgggaatgaa atttgatata 1740
ccagaagtag gtggaggtac agatgaaata aaaacacaat taaacgaaga attaaaaata 1800
gaatatagcc gtgaaaccaa aataatggaa aaatatcagg aacaatcaga gatagataat 1860
ccaactgatc aatcaatgaa ttctatagga ttcctcacta ttacttcttt agaattatat 1920
cgatataatg gttcggaaat tagtgtaatg aaaattcaaa cttcagataa tgatacttac 1980
aatgtgacct cttatccaga tcatcaacaa gctctattac ttcttacaaa tcattcatat 2040
gaagaagtag aagaaataac aaatattccc aaaatatcac tgaaaaaatt aaaaaaatat 2100
tatttttaaa acataattat attttgatag ctttttaaaa ataaagattg ttcaaagtaa 2160
aatgaaagaa aatcttttat gaaactttaa tacaataaaa gaggaatatt ttcttataag 2220
tacttccttg 2230




35


372


DNA


Bacillus thuringiensis



35
atgtcagcac gtgaagtaca cattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgacaa tccttattca 240
ggttctaata aatatgatgg gcattccaat aaaaatcaat atgaagttat tacccaagga 300
ggatcaggaa atcaatctca tgttacgtat actattcaaa ctgtatcttc acgatatggg 360
aataattcat aa 372




36


123


PRT


Bacillus thuringiensis



36
Met Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Asn Gln Tyr Glu Val
85 90 95
Ile Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Val Ser Ser Arg Tyr Gly Asn Asn Ser
115 120




37


1152


DNA


Bacillus thuringiensis



37
atgttagata ctaataaaat ttatgaaata agtaattatg ctaatggatt acatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgactata atttaaggtg gtttttattt cctattgatg ataatcaata tattattaca 180
agctacgcag cgaataattg taaggtttgg aatgttaata atgataaaat aaatgtttca 240
acttattctt caacaaactc gatacagaaa tggcaaataa aagctaatgc ttcttcgtat 300
gtaatacaaa gtaataatgg gaaagttcta acagcaggaa ccggtcaatc tcttggatta 360
atacgtttaa cggatgaatc accagataat cccaatcaac aatggaattt aactcctgta 420
caaacaattc aactcccacc aaaacctaca atagatacaa agttaaaaga ttaccccaaa 480
tattcacaaa ctggcaatat agacaaggga acacctcctc aattaatggg atggacatta 540
ataccttgta ttatggtaaa tgatccaaat atagataaaa acactcaaat caaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacaag cagtaggaag taatgtagct 660
ttacgtccgc atgaaaaaaa atcatatgct tatgagtggg gtacagaaat agatcaaaaa 720
acaactatca ttaatacatt aggatttcag attaatatag attcgggaat gaaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aattaaacga agaattaaaa 840
atagaatata gccgtgaaac caaaataatg gaaaaatatc aggaacaatc agagatagat 900
aatccaactg atcaatcaat gaattctata ggattcctca ctattacttc tttagaatta 960
tatcgatata atggttcgga aattagtgta atgaaaattc aaacttcaga taatgatact 1020
tacaatgtga cctcttatcc agatcatcaa caagctctat tacttcttac aaatcattca 1080
tatgaagaag tagaagaaat aacaaatatt cccaaaatat cactgaaaaa attaaaaaaa 1140
tattattttt aa 1152




38


383


PRT


Bacillus thuringiensis



38
Met Leu Asp Thr Asn Lys Ile Tyr Glu Ile Ser Asn Tyr Ala Asn Gly
1 5 10 15
Leu His Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Arg Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asn Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Ala Ser Ser Tyr Val Ile Gln Ser Asn Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ser Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Pro
115 120 125
Asp Asn Pro Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Pro Lys Pro Thr Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Gln Thr Gly Asn Ile Asp Lys Gly Thr Pro Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Ile Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Gln Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Ala Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser Arg Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Ser Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Ser Val Met Lys Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asp His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Asn Ile Pro Lys Ile Ser Leu Lys Lys Leu Lys Lys Tyr Tyr Phe
370 375 380




39


2132


DNA


Bacillus thuringiensis



39
gtatttcagg gggtgaagat tcaagtaagt ttattgatgt atattatcct tttgaagata 60
gtaattttaa atattatcaa tttataaaag tagcaattga ttttgatatt aatgaagatt 120
ttattaattt taataatcat gacaatatag ggatatttaa ttttgttaca cgaaattttt 180
tattaaataa tgaaaatgat gaataaaaaa tttaatttgt ttattatgtt tattttttga 240
aaattgaatg catatattaa tcgagtatgt ataataaatt ttaattttat ggaggttgat 300
atttatgtca gcacgtgaag tacacattga tgtaaataat aagacaggtc atacattaca 360
attagaagat aaaacaaaac ttgatggtgg tagatggcga acatcaccta caaatgttgc 420
taatgatcaa attaaaacat ttgtagcaga atcaaatggt tttatgacag gtacagaagg 480
tactatatat tatagtataa atggagaagc agaaattagt ttatattttg acaatccttt 540
tgcaggttct aataaatatg atggacattc caataaatct caatatgaaa ttattaccca 600
aggaggatca ggaaatcaat ctcatgttac gtatactatt caaaccacat cctcacgata 660
tgggcataaa tcataacaaa taatttttta cgaaaatacc aaaaaataaa tattttttgg 720
tattttctaa tataaattac aaatatatta ataataaaat tataagaaaa ggtgataaag 780
attatgttag atactaataa agtttatgaa ataagcaatc atgctaatgg actatatgca 840
gcaacttatt taagtttaga tgattcaggt gttagtttaa tgaataaaaa tgatgatgat 900
attgatgatt ataacttaaa atggttttta tttcctattg atgatgatca atatattatt 960
acaagctatg cagcaaataa ttgtaaagtt tggaatgtta ataatgataa aataaatgtt 1020
tcgacttatt cttcaacaaa ttcaatacaa aaatggcaaa taaaagctaa tggttcttca 1080
tatgtaatac aaagtgataa tggaaaagtc ttaacagcag gaaccggtca agctcttgga 1140
ttgatacgtt taactgatga atcctcaaat aatcccaatc aacaatggaa tttaacttct 1200
gtacaaacaa ttcaacttcc acaaaaacct ataatagata caaaattaaa agattatccc 1260
aaatattcac caactggaaa tatagataat ggaacatctc ctcaattaat gggatggaca 1320
ttagtacctt gtattatggt aaatgatcca aatatagata aaaatactca aattaaaact 1380
actccatatt atattttaaa aaaatatcaa tattggcaac gagcagtagg aagtaatgta 1440
gctttacgtc cacatgaaaa aaaatcatat acttatgaat ggggcacaga aatagatcaa 1500
aaaacaacaa ttataaatac attaggattt caaatcaata tagattcagg aatgaaattt 1560
gatataccag aagtaggtgg aggtacagat gaaataaaaa cacaactaaa tgaagaatta 1620
aaaatagaat atagtcatga aactaaaata atggaaaaat atcaagaaca atctgaaata 1680
gataatccaa ctgatcaatc aatgaattct ataggatttc ttactattac ttccttagaa 1740
ttatatagat ataatggctc agaaattcgt ataatgcaaa ttcaaacctc agataatgat 1800
acttataatg ttacttctta tccaaatcat caacaagctt tattacttct tacaaatcat 1860
tcatatgaag aagtagaaga aataacaaat attcctaaaa gtacactaaa aaaattaaaa 1920
aaatattatt tttaaatatt gaaattagaa attatctaaa acaaaacgaa agataattta 1980
atctttaatt atttgtaaga taatcgtatt ttatttgtat taatttttat acaatataaa 2040
gtaatatctg tacgtgaaat tggtttcgct tcaatatcta atctcatctc atgtattaca 2100
tgcgtaatac cttcttgttc tgcttctaca ag 2132




40


372


DNA


Bacillus thuringiensis



40
atgtcagcac gtgaagtaca cattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca aatggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgacaa tccttttgca 240
ggttctaata aatatgatgg acattccaat aaatctcaat atgaaattat tacccaagga 300
ggatcaggaa atcaatctca tgttacgtat actattcaaa ccacatcctc acgatatggg 360
cataaatcat aa 372




41


123


PRT


Bacillus thuringiensis



41
Met Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser Asn Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Phe Ala
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Ser Gln Tyr Glu Ile
85 90 95
Ile Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Thr Ser Ser Arg Tyr Gly His Lys Ser
115 120




42


1241


DNA


Bacillus thuringiensis




misc_feature




(18)




Undetermined nucleotide





42
wcdmtkdvrm wahkcmdndb ygtrawbmkg cwtkctgyhd cywagmawtd cvnwmhasrt 60
nchhtmsnwr manrgarcrr nwrgarhatg ttagatacta ataaagttta tgaaataagc 120
aatcatgcta atggactata tgcagcaact tatttaagtt tagatgattc aggtgttagt 180
ttaatgaata aaaatgatga tgatattgat gattataact taaaatggtt tttatttcct 240
attgatgatg atcaatatat tattacaagc tatgcagcaa ataattgtaa agtttggaat 300
gttaataatg ataaaataaa tgtttcgact tattcttcaa caaattcaat acaaaaatgg 360
caaataaaag ctaatggttc ttcatatgta atacaaagtg ataatggaaa agtcttaaca 420
gcaggaaccg gtcaagctct tggattgata cgtttaactg atgaatcctc aaataatccc 480
aatcaacaat ggaatttaac ttctgtacaa acaattcaac ttccacaaaa acctataata 540
gatacaaaat taaaagatta tcccaaatat tcaccaactg gaaatataga taatggaaca 600
tctcctcaat taatgggatg gacattagta ccttgtatta tggtaaatga tccaaatata 660
gataaaaata ctcaaattaa aactactcca tattatattt taaaaaaata tcaatattgg 720
caacgagcag taggaagtaa tgtagcttta cgtccacatg aaaaaaaatc atatacttat 780
gaatggggca cagaaataga tcaaaaaaca acaattataa atacattagg atttcaaatc 840
aatatagatt caggaatgaa atttgatata ccagaagtag gtggaggtac agatgaaata 900
aaaacacaac taaatgaaga attaaaaata gaatatagtc atgaaactaa aataatggaa 960
aaatatcaag aacaatctga aatagataat ccaactgatc aatcaatgaa ttctatagga 1020
tttcttacta ttacttcctt agaattatat agatataatg gctcagaaat tcgtataatg 1080
caaattcaaa cctcagataa tgatacttat aatgttactt cttatccaaa tcatcaacaa 1140
gctttattac ttcttacaaa tcattcatat gaagaagtag aagaaataac aaatattcct 1200
aaaagtacac taaaaaaatt aaaaaaatat tatttttaav v 1241




43


383


PRT


Bacillus thuringiensis



43
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Ser
115 120 125
Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser His Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Ser Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Gln Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asn His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Asn Ile Pro Lys Ser Thr Leu Lys Lys Leu Lys Lys Tyr Tyr Phe
370 375 380




44


360


DNA


Artificial Sequence




Description of Artificial Sequence
maize-optimized gene sequence






44
atgtccgccc gcgaggtgca catcgagatc aacaacaaga cccgccacac cctccagctc 60
gaggacaaga ccaagctctc cggcggcagg tggcgcacct ccccgaccaa cgtggcccgc 120
gacaccatca agacgttcgt ggcggagtcc cacggcttca tgaccggcgt cgagggcatc 180
atctacttct ccgtgaacgg cgacgccgag atctccctcc acttcgacaa cccgtacatc 240
ggctccaaca agtgcgacgg ctcctccgac aagcccgagt acgaggtgat cacccagtcc 300
ggctccggcg acaagtccca cgtgacctac accatccaga ccgtgtccct ccgcctctga 360




45


1158


DNA


Artificial Sequence




Description of Artificial Sequence
maize-optimized gene sequence






45
atgctcgaca ccaacaaggt gtacgagatc tccaacctcg ccaacggcct ctacacctcc 60
acctacctct ccctcgacga ctccggcgtg tccctcatgt ccaagaagga cgaggacatc 120
gacgactaca acctcaagtg gttcctcttc ccgatcgaca acaaccagta catcatcacc 180
tcctacggcg ccaacaactg caaggtgtgg aacgtgaaga acgacaagat caacgtgtcc 240
acctactcct ccaccaactc cgtgcagaag tggcagatca aggccaagga ctcctcctac 300
atcatccagt ccgacaacgg caaggtgctc accgcgggcg tgggccagtc cctcggcatc 360
gtgcgcctca ccgacgagtt cccggagaac tccaaccagc aatggaacct caccccggtg 420
cagaccatcc agctcccgca gaagccgaag atcgacgaga agctcaagga ccacccggag 480
tactccgaga ccggcaacat caacccgaag accaccccgc agctcatggg ctggaccctc 540
gtgccgtgca tcatggtgaa cgactccaag atcgacaaga acacccagat caagaccacc 600
ccgtactaca tcttcaagaa atacaagtac tggaacctcg ccaagggctc caacgtgtcc 660
ctcctcccgc accagaagcg cagctacgac tacgagtggg gcaccgagaa gaaccagaag 720
accaccatca tcaacaccgt gggcctgcag atcaacatcg actcggggat gaagttcgag 780
gtgccggagg tgggcggcgg caccgaggac atcaagaccc agctcaccga ggagctgaag 840
gtggagtact ccaccgagac caagatcatg accaagtacc aggagcactc cgagatcgac 900
aacccgacca accagccgat gaactccatc ggcctcctca tctacacctc cctcgagctg 960
taccgctaca acggcaccga gatcaagatc atggacatcg agacctccga ccacgacacc 1020
tacaccctca cctcctaccc gaaccacaag gaggcgctgc tgctgctgac caaccactcc 1080
tacgaggagg tggaggagat caccaagatc ccgaagcaca ccctcatcaa gctcaagaag 1140
cactacttca agaagtga 1158




46


24


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer






46
gtagaagcag aacaagaagg tatt 24




47


25


DNA


Artificial Sequence




Description of Artificial Sequence forward
primer






47
atgtcagcwc gygaagtwca yattg 25




48


23


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer






48
gtytgaathg tatahgthac atg 23




49


25


DNA


Artificial Sequence




Description of Artificial Sequence forward
primer






49
atgttagata cwaataaart wtatg 25




50


29


DNA


Artificial Sequence




Description of Artificial Sequence reverse
primer






50
gtwatttctt cwacttcttc atahgaatg 29




51


341


DNA


Bacillus thuringiensis



51
atgtcaggtc gagaagtaca tattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgtaacatat actattcaga c 341




52


113


PRT


Bacillus thuringiensis



52
Met Ser Gly Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




53


1103


DNA


Bacillus thuringiensis



53
atgttagata caaataaagt ttatgaaata agcaatcttg ctaatggatt atatacatcm 60
acttatttaa gtcttgatga ttcaggtgtt agtttaatga gtaaaaagga tgaagatatt 120
gatgattaca atttaaaatg gtttttattt cctattgata ataatcaata tattattaca 180
agctatggag ctaataattg taaagtttgg aatgttaaaa atgataaaat aaatgtttca 240
acttattctt caacaaactc tgtacaaaaa tggcaaataa aagctaaaga ttcttcatat 300
ataatacaaa gtgataatgg aaaggtctta acagcaggag taggtcaatc tcttggaata 360
gtacgcctaa ctgatgaatt tccagagaat tctaaccaac aatggaattt aactcctgta 420
caaacaattc aactcccaca aaaacctaaa atagatgaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat aaatcctaaa acaactcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgattcaaaa atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atataaatac tggaatctag caaaaggaag taatgtatct 660
ttacttccac atcaaaaaag atcatatgat tatgaatggg gtacagaaaa aaatcaaaaa 720
acamctatta ttaatacagt aggattgcaa attaatatag actcaggaat gaaatttgaa 780
gtaccagaag taggaggagg tacagaagac ataaaaacac aattaactga agaattaaaa 840
gttgaatata gcactgaaac caaaataatg acgaaatatc aagaacactc agagatagat 900
aatccaacta atcaaccaat gaattctata ggacttctta tttacacttc tttagaatta 960
tatcgatata acggtacaga aattaagata atggacatag aaacttcaga tcatgatact 1020
tacactctta cttcttatcc aaatcataaa gaagcattat tacttctcac aaaccattca 1080
tatgaagaag tagaagaaat aac 1103




54


367


PRT


Bacillus thuringiensis




MISC_FEATURE




(242)




Undetermined amino acid





54
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Ser Lys Lys Asp Glu Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asp Ser Ser Tyr Ile Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Val Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Phe Pro
115 120 125
Glu Asn Ser Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Glu Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Asn Pro Lys Thr Thr Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Ser Lys Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Lys Tyr Trp Asn Leu Ala Lys Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Arg Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Lys Asn Gln Lys
225 230 235 240
Thr Xaa Ile Ile Asn Thr Val Gly Leu Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Asp Ile Lys
260 265 270
Thr Gln Leu Thr Glu Glu Leu Lys Val Glu Tyr Ser Thr Glu Thr Lys
275 280 285
Ile Met Thr Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Pro Met Asn Ser Ile Gly Leu Leu Ile Tyr Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Thr Glu Ile Lys Ile Met Asp Ile Glu Thr Ser
325 330 335
Asp His Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Lys Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile
355 360 365




55


341


DNA


Bacillus thuringiensis



55
atgtcagctc gtgaagtaca tattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtcat 180
atatattata gtataaatgg agaagcagaa attagtttat attttgataa tccttattca 240
ggttctaata aatatgatgg ggattccaat aaacctcaat atgaagttac tacccaagga 300
ggatcaggaa atcaatctca tgtaacatat acgattcaaa c 341




56


113


PRT


Bacillus thuringiensis



56
Met Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly His Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly Asp Ser Asn Lys Pro Gln Tyr Glu Val
85 90 95
Thr Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




57


1103


DNA


Bacillus thuringiensis




misc_feature




(1028)




Undetermined nucleotide





57
atgttagata ctaataaagt ttatgaaata agtaatcatg ctaatggact atatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgattaca acttaaaatg gtttttattt cctattgatg atgatcaata tattattaca 180
agctatgcag caaataattg taaagtttgg aatgttaata atgataaaat aaatgtttcg 240
acttattctt taacaaattc aatacaaaaa tggcaaataa aagctaatgg ttcttcatat 300
gtaatacaaa gtgataatgg aaaagtctta acagcaggaa ccggtcaagc tcttggattg 360
atacgtttaa ctgatgaatc ttcaaataat cccaatcaac aatggaattt aacttctgta 420
caaacaattc aacttccaca aaaacctata atagatacaa aattaaaaga ttatcccaaa 480
tattcaccaa ctggaaatat agataatgga acatctcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaat atagataaaa atactcaaat taaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacgag cagtaggaag taatgtagct 660
ttacgtccac atgaaaaaaa atcatatact tatgaatggg gaacagaaat agatcaaaaa 720
acaacaatca taaatacatt aggatttcaa atcaatatag attcaggaat gaaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aactaaatga agaattaaaa 840
atagaatata gtcgtgaaac taaaataatg gaaaaatatc aagaacaatc tgaaatagat 900
aatccaactg atcaaccaat gaattctata ggatttctta ctattacttc tttagaatta 960
tatagatata atggctcaga aattcgtata atgcaaattc aaacctcaga taatgatact 1020
tataatgnta cttcttatcc agatcatcaa caagctttat tacttcttac aaatcattca 1080
tatgaagaac tagaagaaat aac 1103




58


367


PRT


Bacillus thuringiensis




MISC_FEATURE




(343)




Undetermined amino acid





58
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Leu Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Ser
115 120 125
Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser Arg Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Pro Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Gln Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Xaa Thr Ser Tyr Pro Asp His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Leu Glu Glu Ile
355 360 365




59


340


DNA


Bacillus thuringiensis



59
atgtcagcag gtgaagtaca tattgatgca aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtcat 180
atatattata gtataaatgg agaagcagaa attagtttat attttgataa tccttattca 240
ggttctaata aatatgatgg ggattccaat aaacctcaat atgaagttac tacccaagga 300
ggatcaggaa atcaatctca tgttacttat acaattcaaa 340




60


113


PRT


Bacillus thuringiensis



60
Met Ser Ala Gly Glu Val His Ile Asp Ala Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly His Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly Asp Ser Asn Lys Pro Gln Tyr Glu Val
85 90 95
Thr Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




61


340


DNA


Bacillus thuringiensis



61
tgtcagcacg tgaagtacat attgaaataa acaataaaac acgtcataca ttacaattag 60
aggataaaac taaacttagc ggcggtagat ggcgaacatc acctacaaat gttgctcgtg 120
atacaattaa aacatttgta gcagaatcac atggttttat gacaggagta gaaggtatta 180
tatattttag tgtaaacgga gacgcagaaa ttagtttaca ttttgacaat ccttatatag 240
gttctaataa atgtgatggt tcttctgata aacctgaata tgaagttatt actcaaagcg 300
gatcaggaga taaatctcat gtgacatata cgattcagac 340




62


112


PRT


Bacillus thuringiensis



62
Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His Thr
1 5 10 15
Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg Thr
20 25 30
Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala Glu
35 40 45
Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser Val
50 55 60
Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile Gly
65 70 75 80
Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val Ile
85 90 95
Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile Gln
100 105 110




63


1114


DNA


Bacillus thuringiensis



63
atgttagata ctaataaaat ttatgaaata agcaatcttg ctaatggatt atatacatca 60
acttatttaa gtcttgatga ttcaggtgtt agtttaatga gtaaaaagga tgaagatatt 120
gatgattaca atttaaaatg gtttttattt cctattgata ataatcaata tattattaca 180
agctatggag ctaataattg taaagtttgg aatgttaaaa atgataaaat aaatgtttca 240
acttattctt caacaaactc tgtacaaaaa tggcaaataa aagctaaaga ttcttcatat 300
ataatacaaa gtgataatgg aaaggtctta acagcaggag taggtcaatc tcttggaata 360
gtacgcctaa ctgatgaatt tccagagaat tctaaccaac aatggaattt aactcctgta 420
caaacaattc aactcccaca aaaacctaaa atagatgaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat aaatcctaaa acaactcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgattcaaaa atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atataaatac tggaatctag caaaaggaag taatgtatct 660
ttacttccac atcaaaaaag atcatatgat tatgaatggg gtacagaaaa aaatcaaaaa 720
acaactatta ttaatacagt aggattgcaa attaatatag attcaggaat gaaatttgaa 780
gtaccagaag taggaggagg tacagaagac ataaaaacac aattaactga agaattaaaa 840
gttgaatata gcactgaaac caaaataatg acgaaatatc aagaacactc agagatagat 900
aatccaacta atcaaccaat gaattctata ggacttctta tttatacttc tttagaatta 960
tatcgatata acggtacaga aattaagata atggacatag aaacttcaga tcatgatact 1020
tacactctta cttcttatcc aaatcataaa gaagcattat tacttctcac aaaccattct 1080
tatgaagaac tagaacaaat tacaagggcg aatt 1114




64


371


PRT


Bacillus thuringiensis



64
Met Leu Asp Thr Asn Lys Ile Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Ser Lys Lys Asp Glu Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asp Ser Ser Tyr Ile Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Val Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Phe Pro
115 120 125
Glu Asn Ser Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Glu Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Asn Pro Lys Thr Thr Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Ser Lys Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Lys Tyr Trp Asn Leu Ala Lys Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Arg Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Lys Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Leu Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Asp Ile Lys
260 265 270
Thr Gln Leu Thr Glu Glu Leu Lys Val Glu Tyr Ser Thr Glu Thr Lys
275 280 285
Ile Met Thr Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Pro Met Asn Ser Ile Gly Leu Leu Ile Tyr Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Thr Glu Ile Lys Ile Met Asp Ile Glu Thr Ser
325 330 335
Asp His Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Lys Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Leu Glu Gln Ile Thr
355 360 365
Arg Ala Asn
370




65


360


DNA


Bacillus thuringiensis



65
atgtcagctc gcgaagtaca cattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgtgacatat actattcaga cagtatcttt acgattataa 360




66


119


PRT


Bacillus thuringiensis



66
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Val Ser Leu Arg Leu
115




67


1158


DNA


Bacillus thuringiensis



67
atgttagata ctaataaagt ttatgaaata agcaatcttg ctaatggatt atatacatca 60
acttatttaa gtcttgatga ttcaggtgtt agtttaatga gtaaaaagga tgaagatatt 120
gatgattaca atttaaaatg gtttttattt cctattgata ataatcaata tattattaca 180
agctatggag ctaataattg taaagtttgg aatgttaaaa atgataaaat aaatgtttca 240
acttattctt caacaaactc tgtacaaaaa tggcaaataa aagctaaaga ttcttcatat 300
ataatacaaa gtgataatgg aaaggtctta acagcaggag taggtcaatc tcttggaata 360
gtacgcctaa ctgatgaatt tccagagaat tctaaccaac aatggaattt aactcctgta 420
caaacaattc aactcccaca aaaacctaaa atagatgaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat aaatcctaaa acaactcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgattcaaaa atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atataaatac tggaatctag caaaaggaag taatgtatct 660
ttacttccac atcaaaaaag atcatatgat tatgaatggg gtacagaaaa aaatcaaaaa 720
acaactatta ttaatacagt aggattgcaa attaatatag attcaggaat gaaatttgaa 780
gtaccagaag taggaggagg tacagaagac ataaaaacac aattaactga agaattaaaa 840
gttgaatata gcactgaaac caaaataatg acgaaatatc aagaacactc agagatagat 900
aatccaacta atcaaccaat gaattctata ggacttctta tttatacttc tttagaatta 960
tatcgatata acggtacaga aattaagata atggacatag aaacttcaga tcatgatact 1020
tacactctta cttcttatcc aaatcataaa gaagcattat tacttctcac aaaccattcg 1080
tatgaagaag tagaagaaat aacaaaaata cctaagcata cacttataaa attgaaaaaa 1140
cattatttta aaaaataa 1158




68


385


PRT


Bacillus thuringiensis



68
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Ser Lys Lys Asp Glu Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asp Ser Ser Tyr Ile Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Val Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Phe Pro
115 120 125
Glu Asn Ser Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Glu Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Asn Pro Lys Thr Thr Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Ser Lys Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Lys Tyr Trp Asn Leu Ala Lys Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Arg Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Lys Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Leu Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Asp Ile Lys
260 265 270
Thr Gln Leu Thr Glu Glu Leu Lys Val Glu Tyr Ser Thr Glu Thr Lys
275 280 285
Ile Met Thr Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Pro Met Asn Ser Ile Gly Leu Leu Ile Tyr Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Thr Glu Ile Lys Ile Met Asp Ile Glu Thr Ser
325 330 335
Asp His Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Lys Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Lys Ile Pro Lys His Thr Leu Ile Lys Leu Lys Lys His Tyr Phe Lys
370 375 380
Lys
385




69


341


DNA


Bacillus thuringiensis



69
atgtcagcac gagaagtaca cattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatctgt agcagaatca aatggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgacaa tccttttgca 240
ggttctaata aatatgatgg acattccaat aaatctcaat atgaaattat tacccaagga 300
ggatcaggaa atcaatctca tgttacttat acaattcaga c 341




70


113


PRT


Bacillus thuringiensis



70
Met Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Ser Val Ala
35 40 45
Glu Ser Asn Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Phe Ala
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Ser Gln Tyr Glu Ile
85 90 95
Ile Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




71


340


DNA


Bacillus thuringiensis



71
atgtcagcag gcgaagttca tattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca aatggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgacaa tccttttgca 240
ggttctaata aatatgatgg acattccaat aaatctcaat atgaaattat tacccaagga 300
ggatcaggaa atcaatctca tgtaacgtat acaattcaaa 340




72


113


PRT


Bacillus thuringiensis



72
Met Ser Ala Gly Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser Asn Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Phe Ala
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Ser Gln Tyr Glu Ile
85 90 95
Ile Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




73


340


DNA


Bacillus thuringiensis



73
atgtcagctc gcgaagtwca tattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgtgacatat accattcaaa 340




74


113


PRT


Bacillus thuringiensis



74
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




75


341


DNA


Bacillus thuringiensis



75
atgtcagctc gcgaagttca tattgaaata aataataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttac cagtggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggaat agaaggtatt 180
atatatttta gcgtaaacgg agaagcagaa attagtttac attttgacaa tccttatgta 240
ggttctaata aatatgatgg ttcttctgat aaagctgcat acgaagttat tgctcaaggt 300
ggatcagggg atatatctca tgtaacttat acaattcaaa c 341




76


113


PRT


Bacillus thuringiensis



76
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Thr Ser Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Ile Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Glu Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Val
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly Ser Ser Asp Lys Ala Ala Tyr Glu Val
85 90 95
Ile Ala Gln Gly Gly Ser Gly Asp Ile Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




77


1175


DNA


Bacillus thuringiensis



77
atgttagata ctaataaagt ttatgaaata agcaatcatg ctaatggatt atatacatca 60
acttatttaa gtctggatga ttcaggtgtt agtttaatgg gtcaaaatga tgaggatata 120
gatgaatmca atttaaagtg gttcttattt ccaatagata ataatcaata tattattaca 180
agctatggag cgaataattg taaagtttgg aatgttaaaa atgataaagt aaatgtttca 240
acgtattctc caacaaactc agtacaaaaa tggcaaataa aagctaaaaa ttcttcatat 300
ataatacaaa gtgagaatgg aaaagtctta acagcaggaa taggtcaatc tcctggaata 360
gtacgcttaa ccgatgaatc atcagagagt tctaaccaac aatggaattt aatccctgta 420
caaacaattt cactcccaca aaaacctaaa atagataaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat agctactgga acaattcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaaa atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atatcaatac tggaaacgag caataggaag taatgtatct 660
ttacttccac atcaaaaaaa atcatatgat tatgagtggg gtacagaaga aaatcaaaaa 720
acaactatta ttaatacagt aggatttcaa attaatgtag attcaggaat gaagtttgag 780
gtaccagaag taggaggagg tacagaagaa ataaaaacac aattaaatga agaattaaaa 840
gttgaatata gcactgacac caaaataatg aaaaaatatc aagaacactc agagatagat 900
aatccaacta atcaaacaat gaattctata ggatttctta cttttacttc tttagaatta 960
tatcgatata acggttcgga aattcgtata atgagaatgg aaacttcaga taatgatact 1020
tatactctga cctcttatcc aaatcataga gaagcattat tacttctcac aaatcattca 1080
tatcaagaag tacmagaaat tacaagggcg aattcttgca gatatccatc acactggcgg 1140
gccggtcgag ccttgcatct agaggggccc caatt 1175




78


391


PRT


Bacillus thuringiensis




MISC_FEATURE




(43)




Undetermined amino acid





78
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Gly Gln Asn Asp Glu Asp Ile Asp Glu Xaa Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Val Asn Val Ser
65 70 75 80
Thr Tyr Ser Pro Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asn Ser Ser Tyr Ile Ile Gln Ser Glu Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Ile Gly Gln Ser Pro Gly Ile Val Arg Leu Thr Asp Glu Ser Ser
115 120 125
Glu Ser Ser Asn Gln Gln Trp Asn Leu Ile Pro Val Gln Thr Ile Ser
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Lys Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Ala Thr Gly Thr Ile Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Lys Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Gln Tyr Trp Lys Arg Ala Ile Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Lys Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Glu Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Phe Gln Ile Asn Val Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Val Glu Tyr Ser Thr Asp Thr Lys
275 280 285
Ile Met Lys Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Thr Met Asn Ser Ile Gly Phe Leu Thr Phe Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Arg Met Glu Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Arg Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Gln Glu Val Xaa Glu Ile Thr
355 360 365
Arg Ala Asn Ser Cys Arg Tyr Pro Ser His Trp Arg Ala Gly Arg Ala
370 375 380
Leu His Leu Glu Gly Pro Gln
385 390




79


341


DNA


Bacillus thuringiensis



79
atgtcagcag gtgaagttca tattgaaata aataataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttac cagtggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggaat agaaggtatt 180
atatatttta gcgtaaacgg agaagcagaa attagtttac attttgacaa tccttatgta 240
ggttctaata aatatgatgg ttcttctgat aaagctgcat acgaagttat tgctcaaggt 300
ggatcagggg atatatctca tctaacatat acaattcaaa c 341




80


113


PRT


Bacillus thuringiensis



80
Met Ser Ala Gly Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Thr Ser Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Ile Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Glu Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Val
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly Ser Ser Asp Lys Ala Ala Tyr Glu Val
85 90 95
Ile Ala Gln Gly Gly Ser Gly Asp Ile Ser His Leu Thr Tyr Thr Ile
100 105 110
Gln




81


1410


DNA


Bacillus thuringiensis



81
atgttagata ctaataaaat ttatgaaata agcaatcatg ctaatggatt atatacatca 60
acttatttaa gtctggatga ttcaggtgtt agtttaatgg gtcaaaatga tgaggatata 120
gatgaataca atttaaagtg gttcttattt ccaatagata ataatcaata tattattaca 180
agctatggag cgaataattg taaagtttgg aatgttaaaa atgataaagt aaatgtttca 240
acgtattctc caacaaactc agtacaaaaa tggcaaataa aagctaaaaa ttcttcatat 300
ataatacaaa gtgagaatgg aaaagtctta acagcaggaa taggtcaatc tcttggaata 360
gtacgcttaa ccgatgaatc atcagagagt tctaaccaac aatggaattt aatccctgta 420
caaacaattt cactcccaca aaaacctaaa atagataaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat agctactgga acaattcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaaa ataggtaaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atatcaatac tggaaacgag caataggaag taatgtatct 660
ttacttccac atcaaaaaaa atcatatgat tatgagtggg gtacagaaga aaatcaaaaa 720
acaactatta ttaatacagt aggatttcaa attaatgtag attcaggaat gaagtttgag 780
gtaccagaag taggaggagg tacagaagaa ataaaaacac aattaaatga agaattaaaa 840
gttgaatata gcactgacac caaaataatg aaaaaatatc aagaacactc agagatagat 900
aatccaacta atcaaacaac gaattctata ggatttctta cttttacttc tttagaatta 960
tatcgatata acggttcgga aattcgtata atgagaatgg aaacttcaga taatgatact 1020
tatactctga cctcttatcc aaatcataga gaagcattat tacttctcac aaatcattct 1080
tatcaagaag taagccgaat tccagcacac tggcggccgt tactagtgga tccgagctcg 1140
gtaccaagct tggcgtaatc atggtcatag stgtttcctg tgtgaaattg ttatccgctc 1200
acaattccac acaacatacg agccggaagc ataaagtgta aagcctgggg tgcctaatga 1260
gtgagctaac tcacattaat tgcgttgcgc tcactgcccg ctttccagtc gggaaacctg 1320
tcgtgccagc tgcattaatg aatcggccaa cgcgcgggga gaggcggttt gcgtattggg 1380
cgctcttccg cttcctcgct cactgactcg 1410




82


462


PRT


Bacillus thuringiensis




MISC_FEATURE




(389)




Undetermined amino acid





82
Met Leu Asp Thr Asn Lys Ile Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Gly Gln Asn Asp Glu Asp Ile Asp Glu Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Val Asn Val Ser
65 70 75 80
Thr Tyr Ser Pro Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asn Ser Ser Tyr Ile Ile Gln Ser Glu Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Ile Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Ser Ser
115 120 125
Glu Ser Ser Asn Gln Gln Trp Asn Leu Ile Pro Val Gln Thr Ile Ser
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Lys Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Ala Thr Gly Thr Ile Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Lys Ile Gly
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Gln Tyr Trp Lys Arg Ala Ile Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Lys Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Glu Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Phe Gln Ile Asn Val Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Val Glu Tyr Ser Thr Asp Thr Lys
275 280 285
Ile Met Lys Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Thr Thr Asn Ser Ile Gly Phe Leu Thr Phe Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Arg Met Glu Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Arg Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Gln Glu Val Ser Arg Ile Pro
355 360 365
Ala His Trp Arg Pro Leu Leu Val Asp Pro Ser Ser Val Pro Ser Leu
370 375 380
Ala Ser Trp Ser Xaa Phe Pro Val Asn Cys Tyr Pro Leu Thr Ile Pro
385 390 395 400
His Asn Ile Arg Ala Gly Ser Ile Lys Cys Lys Ala Trp Gly Ala Val
405 410 415
Ser Leu Thr Leu Ile Ala Leu Arg Ser Leu Pro Ala Phe Gln Ser Gly
420 425 430
Asn Leu Ser Cys Gln Leu His Ile Gly Gln Arg Ala Gly Arg Gly Gly
435 440 445
Leu Arg Ile Gly Arg Ser Ser Ala Ser Ser Leu Thr Asp Ser
450 455 460




83


340


DNA


Bacillus thuringiensis



83
tgtcagcacg tgaagtacat attgatgtaa ataataagac aggtcataca ttacaattag 60
aagataaaac aaaacttgat ggtggtagat ggcgaacatc acctacaaat gttgctaatg 120
atcaaattaa aacatttgta gcagaatcaa atggttttat gacaggtaca gaaggtacta 180
tatattatag tataaatgga gaagcagaaa ttagtttata ttttgacaat ccttttgcag 240
gttctaataa atatgatgga cattccaata aatctcaata tgaaattatt acccaaggag 300
gatcaggaaa tcaatctcat gtgacatata ctattcaaac 340




84


112


PRT


Bacillus thuringiensis



84
Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His Thr
1 5 10 15
Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg Thr
20 25 30
Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala Glu
35 40 45
Ser Asn Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser Ile
50 55 60
Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Phe Ala Gly
65 70 75 80
Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Ser Gln Tyr Glu Ile Ile
85 90 95
Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile Gln
100 105 110




85


1114


DNA


Bacillus thuringiensis



85
atgttagata ctaataaagt ttatgaaata agcaatcatg ctaatggact atatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgattata acttaaaatg gtttttattt cctattgatg atgatcaata tattattaca 180
agctatgcag caaataattg taaagtttgg aatgttaata atgataaaat aaatgtttcg 240
acttattctt caacaaattc aatacaaaaa tggcaaataa aagctaatgg ttcttcatat 300
gtaatacaaa gtgataatgg aaaagtctta acagcaggaa ccggtcaagc tcttggattg 360
atacgtttaa ctgatgaatc ctcaaataat cccaatcaac aatggaattt aacttctgta 420
caaacaattc aacttccacg aaaacctata atagatacaa aattaaaaga ttatcccaaa 480
tattcaccaa ctggaaatat agataatgga acatctcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaat atagataaaa atactcaaat taaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacgag cagtaggaag taatgtagct 660
ttacgtccac atgaaaaaaa atcatatact tatgaatggg gcacagaaat agatcaaaaa 720
acaacaatta taaatacatt aggatttcaa atcaatatag attcaggaat gaaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aactaaatga agaattaaaa 840
atagaatata gtcatgaaac taaaataatg gaaaaatatc aagaacaatc tgaaatagat 900
aatccaactg atcaatcaat gaattctata ggatttctta ctattacttc cttagaatta 960
tatagatata atggctcaga aattcgtata atgcaaattc aaacctcaga taatgatact 1020
tataatgtta cttcttatcc aaatcatcaa caagctttat tacttcttac aaatcattca 1080
tatgaagaag ttgaagaaat aacaagggcg aatt 1114




86


371


PRT


Bacillus thuringiensis



86
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Ser
115 120 125
Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile Gln
130 135 140
Leu Pro Arg Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser His Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Ser Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Gln Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asn His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Arg Ala Asn
370




87


341


DNA


Bacillus thuringiensis



87
atgtcagctg gcgaagttca tattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgtcacttat acaattcaaa c 341




88


113


PRT


Bacillus thuringiensis



88
Met Ser Ala Gly Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




89


1186


DNA


Bacillus thuringiensis



89
atgttagata caaataaagt ttatgaaata agcaatcttg ctaatggatt atatacatca 60
acttatttaa gtcttgatga ttcaggtgtt agtttaatga gtaaaaagga tgaagatatt 120
gatgattaca atttaaaatg gtttttattt cctattgata ataatcaata tattattaca 180
agctatggag ctaataattg taaagtttgg aatgttaaaa atgataaaat aaatgtttca 240
acttattctt caacaaactc tgtacaaaaa tggcaaataa aagctaaaga ttcttcatat 300
ataatacaaa gtgataatgg aaaggtctta acagcaggag taggtcaatc tcttggaata 360
gtacgcctaa ctgatgaatt tccagagaat tctaaccaac aatggaattt aactcctgta 420
caaacaattc aactcccaca aaaacctaaa atagatgaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat aaatcctaaa acaactcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgattcaaaa atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atataaatac tggaatctag caaaaggaag taatgtatct 660
ttacttccac atcaaaaaag atcatatgat tatgaatggg gtacagaaaa aaatcaaaaa 720
acaactatta ttaatacagt aggattgcaa attaatatag attcaggaat gaaatttgaa 780
gtaccagaag taggaggagg tacagaagac ataaaaacac aattaactga agaattaaaa 840
gttgaatata gcactgaaac caaaataatg acgaaatatc aagaacactc agagatagat 900
aatccaacta atcaaccaat gaattctata ggacttctta tttatacttc tttagaatta 960
tatcgatata acggrcagaa attaagataa tggacataga aacttcagat catgatactt 1020
acactcttac ttcttatcca aatcataaag aagcattatt acttctcaca aaccattctt 1080
atgaagaagt agaagaaatt acaagggcga attccagcac actggcggcc gttactagtg 1140
gatccgagct cggtaccaag cttggcgtgt caggtcaaag ggttca 1186




90


392


PRT


Bacillus thuringiensis



90
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Ser Lys Lys Asp Glu Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asp Ser Ser Tyr Ile Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Val Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Phe Pro
115 120 125
Glu Asn Ser Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Glu Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Asn Pro Lys Thr Thr Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Ser Lys Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Lys Tyr Trp Asn Leu Ala Lys Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Arg Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Lys Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Leu Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Asp Ile Lys
260 265 270
Thr Gln Leu Thr Glu Glu Leu Lys Val Glu Tyr Ser Thr Glu Thr Lys
275 280 285
Ile Met Thr Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Pro Met Asn Ser Ile Gly Leu Leu Ile Tyr Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Gln Lys Leu Arg Trp Thr Lys Leu Gln Ile Met
325 330 335
Ile Leu Thr Leu Leu Leu Leu Ile Gln Ile Ile Lys Lys His Tyr Tyr
340 345 350
Phe Ser Gln Thr Ile Leu Met Lys Lys Lys Lys Leu Gln Gly Arg Ile
355 360 365
Pro Ala His Trp Arg Pro Leu Leu Val Asp Pro Ser Ser Val Pro Ser
370 375 380
Leu Ala Cys Gln Val Lys Gly Phe
385 390




91


341


DNA


Bacillus thuringiensis



91
atgtcagcag ccgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaactt a 341




92


113


PRT


Bacillus thuringiensis



92
Met Ser Ala Ala Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr




93


341


DNA


Bacillus thuringiensis



93
atgtcagatc gcgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaactt a 341




94


113


PRT


Bacillus thuringiensis



94
Met Ser Asp Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr




95


353


DNA


Bacillus thuringiensis



95
atgtcagcac gtgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaacat atacgattca aac 353




96


117


PRT


Bacillus thuringiensis



96
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Ile Gln
115




97


353


DNA


Bacillus thuringiensis



97
atgtcagctc gtgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtgacat atacaattca aac 353




98


117


PRT


Bacillus thuringiensis



98
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Ile Gln
115




99


353


DNA


Bacillus thuringiensis



99
atgtcaggtc gcgaagttca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaacat atacgattca aac 353




100


117


PRT


Bacillus thuringiensis



100
Met Ser Gly Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Ile Gln
115




101


353


DNA


Bacillus thuringiensis



101
atgtcagctc gtgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgttacgt atacaattca aac 353




102


117


PRT


Bacillus thuringiensis



102
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Ile Gln
115




103


353


DNA


Bacillus thuringiensis



103
atgtcaggtc gcgaagtaga tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagcg 300
agagcagaac atagagctaa taatcatgat catgtaacat atactattca gac 353




104


117


PRT


Bacillus thuringiensis



104
Met Ser Gly Arg Glu Val Asp Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Ile Gln
115




105


353


DNA


Bacillus thuringiensis



105
atgtcagcac gtgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaacat ataccattca aac 353




106


117


PRT


Bacillus thuringiensis



106
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Ile Gln
115




107


341


DNA


Bacillus thuringiensis



107
atgtcaggtc gcgaagttca tattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caagacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgacaa tccttattca 240
ggttctaata aatatgatgg gcattccaat aaaaatcaat atgaagttat tacccaagga 300
ggatcaggaa atcaatctca tctgacgtat acaattcaaa c 341




108


113


PRT


Bacillus thuringiensis



108
Met Ser Gly Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Arg Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Asn Gln Tyr Glu Val
85 90 95
Ile Thr Gln Gly Gly Ser Gly Asn Gln Ser His Leu Thr Tyr Thr Ile
100 105 110
Gln




109


1114


DNA


Bacillus thuringiensis



109
atgttagata ctaataaagt atatgaaata agtaattatg ctaatggatt acatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgactata atttaaggtg gtttttattt cctattgatg ataatcaata tattattaca 180
agctacgcag cgaataattg taaggtttgg aatgttaata atgataaaat aaatgtttca 240
acttattctt caacaaactc gatacagaaa tggcaaataa aagctaatgc ttcttcgtat 300
gtaatacaaa gtaataatgg gaaagttcta acagcaggaa ccggtcaatc tcttggatta 360
atacgtttaa cggatgaatc accagataat cccaatcaac aatggaattt aactcctgta 420
caaacaattc aactcccacc aaaacctaca atagatacaa agttaaaaga ttaccccaaa 480
tattcacaaa ctggcaatat agacaaggga acacctcctc aattaatggg atggacatta 540
ataccttgta ttatggtaaa tgatccaaat atagataaaa acactcaaat caaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacaag cagtaggaag taatgtagct 660
ttacgtccgc atgaaaaaaa atcatatgct tatgagtggg gtacagaaat agatcaaaaa 720
acaactatca ttaatacatt aggatttcag attaatatag attcgggaat ggaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aattaaacga agaattaaaa 840
atagaatata gccgtgaaac caaaataatg gaaaaatatc aggaacaatc agagatagat 900
aatccaactg atcaatcaat gaattctata ggattcctca ctattacttc tttagaatta 960
tatcgatata atggttcgga aattagtgta atgaaaattc aaacttcaga taatgatact 1020
tacaatgtga cctcttatcc agatcatcaa caagctctat tacttcttac aaatcattca 1080
tatgaacaag tacaagaaat aacaagggcg aatt 1114




110


371


PRT


Bacillus thuringiensis



110
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Tyr Ala Asn Gly
1 5 10 15
Leu His Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Arg Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asn Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Ala Ser Ser Tyr Val Ile Gln Ser Asn Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ser Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Pro
115 120 125
Asp Asn Pro Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Pro Lys Pro Thr Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Gln Thr Gly Asn Ile Asp Lys Gly Thr Pro Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Ile Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Gln Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Ala Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Glu Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser Arg Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Ser Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Ser Val Met Lys Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asp His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Gln Val Gln Glu Ile Thr
355 360 365
Arg Ala Asn
370




111


341


DNA


Bacillus thuringiensis



111
atgtcagctc gtgaagtaca tattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgttacatat acaattcaga c 341




112


113


PRT


Bacillus thuringiensis



112
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




113


360


DNA


Bacillus thuringiensis



113
atgtcagctc gcgaagtaca cattgaaata aacaataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttag cggcggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggagt agaaggtatt 180
atatatttta gtgtaaacgg agacgcagaa attagtttac attttgacaa tccttatata 240
ggttctaata aatgtgatgg ttcttctgat aaacctgaat atgaagttat tactcaaagc 300
ggatcaggag ataaatctca tgtgacatat actattcaga cagtatcttt acgattataa 360




114


119


PRT


Bacillus thuringiensis



114
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Cys Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Val Ser Leu Arg Leu
115




115


1158


DNA


Bacillus thuringiensis



115
atgttagata ctaataaagt ttatgaaata agcaatcttg ctaatggatt atatacatca 60
acttatttaa gtcttgatga ttcaggtgtt agtttaatga gtaaaaagga tgaagatatt 120
gatgattaca atttaaaatg gtttttattt cctattgata ataatcaata tattattaca 180
agctatggag ctaataattg taaagtttgg aatgttaaaa atgataaaat aaatgtttca 240
acttattctt caacaaactc tgtacaaaaa tggcaaataa aagctaaaga ttcttcatat 300
ataatacaaa gtgataatgg aaaggtctta acagcaggag taggtgaatc tcttggaata 360
gtacgcctaa ctgatgaatt tccagagaat tctaaccaac aatggaattt aactcctgta 420
caaacaattc aactcccaca aaaacctaaa atagatgaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat aaatcctaaa acaactcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgattcagga atagataaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atataaatac tggaatctag caaaaggaag taatgtatct 660
ttacttccac atcaaaaaag atcatatgat tatgaatggg gtacagaaaa aaatcaaaaa 720
acatctatta ttaatacagt aggattgcaa attaatatag attcaggaat gaaatttgaa 780
gtaccagaag taggaggagg tacagaagac ataaaaacac aattaactga agaattaaaa 840
gttgaatata gcactgaaac caaaataatg acgaaatatc aagaacactc agagatagat 900
aatccaacta atcaaccaat gaattctata ggacttctta tttatacttc tttagaatta 960
tatcgatata acggtacaga aattaagata atggacatag aaacttcaga tcatgatact 1020
tacactctta cttcttatcc aaatcataaa gaagcattat tacttctcac aaaccattcg 1080
tatgaagaag tagaagaaat aacaaaaata cctaagcata cacttataaa attgaaaaaa 1140
cattatttta aaaaataa 1158




116


385


PRT


Bacillus thuringiensis



116
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn Leu Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Ser Lys Lys Asp Glu Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asp Ser Ser Tyr Ile Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Val Gly Glu Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Phe Pro
115 120 125
Glu Asn Ser Asn Gln Gln Trp Asn Leu Thr Pro Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Glu Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Asn Pro Lys Thr Thr Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Ser Gly Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Lys Tyr Trp Asn Leu Ala Lys Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Arg Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Lys Asn Gln Lys
225 230 235 240
Thr Ser Ile Ile Asn Thr Val Gly Leu Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Asp Ile Lys
260 265 270
Thr Gln Leu Thr Glu Glu Leu Lys Val Glu Tyr Ser Thr Glu Thr Lys
275 280 285
Ile Met Thr Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Pro Met Asn Ser Ile Gly Leu Leu Ile Tyr Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Thr Glu Ile Lys Ile Met Asp Ile Glu Thr Ser
325 330 335
Asp His Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Lys Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Lys Ile Pro Lys His Thr Leu Ile Lys Leu Lys Lys His Tyr Phe Lys
370 375 380
Lys
385




117


341


DNA


Bacillus thuringiensis



117
atgtcagcac gccaacttca tattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgacaa tccttattca 240
ggttctaata aatatgatgg gcattctaat aaaaatcaat atgaagttat tacccaagga 300
ggatcaggaa atcaatctca tgtgacttat acgattcaca c 341




118


113


PRT


Bacillus thuringiensis



118
Met Ser Ala Arg Gln Leu His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Asn Gln Tyr Glu Val
85 90 95
Ile Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
His




119


341


DNA


Bacillus thuringiensis



119
atgtcaggtc gtgaagttca tattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgataa tccttattca 240
ggttctaata aatatgatgg gcattccaat aaacctcaat atgaagttac tacccaagga 300
ggatcaggaa atcaatctca tgtaacgtat actattcaaa c 341




120


113


PRT


Bacillus thuringiensis



120
Met Ser Gly Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Pro Gln Tyr Glu Val
85 90 95
Thr Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




121


341


DNA


Bacillus thuringiensis



121
atgtcaggtc gcgaagttga cattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgataa tccttattca 240
ggttctaata aatatgatgg gcattccaat aaacctcaat atgaagttac tacccaagga 300
ggatcaggaa atcaatctca tgtcacatat acgattcaaa c 341




122


113


PRT


Bacillus thuringiensis



122
Met Ser Gly Arg Glu Val Asp Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Pro Gln Tyr Glu Val
85 90 95
Thr Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




123


341


DNA


Bacillus thuringiensis



123
atgtcagcac gtgaagtaga tattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgataa tccttattca 240
ggttctaata aatatgatgg gcattccaat aaacctcaat atgaagttac tacccaagga 300
ggatcaggaa atcaatctca tgtaacgtat acgattcaaa c 341




124


113


PRT


Bacillus thuringiensis



124
Met Ser Ala Arg Glu Val Asp Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Pro Gln Tyr Glu Val
85 90 95
Thr Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln




125


1103


DNA


Bacillus thuringiensis



125
atgttagata ctaataaagt ttatgaaata agtaatcatg ctaatggact atatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgattata acttaaaatg gtttttattt cctattgatg atgatcaata tattattaca 180
agctatgcag caaataattg taaagtttgg aatgttaata atgataaaat aaatgtttcg 240
acttattctt caacaaattc aatacaaaaa tggcaaataa aagctaatgg ttcttcatat 300
gtaatacaaa gtgataatgg aaaagtctta acagcaggaa ccggtcaagc tcttggattg 360
atacgtttaa ctgatgaatc ctcaaataat cccaatcaac aatggaattt aacttctgta 420
caaacaattc aacttccaca aaaacctata atagatacaa aattaaaaga ttatcccaaa 480
tattcaccaa ctggaaatat agataatgga acatctcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaat atagataaaa atactcaaat taaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacgag cagtaggaag taatgtagct 660
ttacgtccac atgaagaaaa atcatatact tatgaatggg gaacagaaat agatcaaaaa 720
acaacaatca taaatacatt aggatttcaa atcaatatag attcaggaat gaaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aactaaatga agaattaaaa 840
atagaatata gtcgtgaaac taaaataatg gaaaaatatc aagaacaatc tgaaatagat 900
aatccaactg atcaaccaat gaattctata ggatttctta ctattacttc tttagaatta 960
tatagatata atggctcaga aattcgtata atgcaaattc aaacctcaga taatgatact 1020
tataatgtta cttcttatcc agatcatcaa caagctttat tacttcttac aaatcattca 1080
tatgaagaac ttgaagaaat tag 1103




126


367


PRT


Bacillus thuringiensis



126
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Ser
115 120 125
Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Glu Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser Arg Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Pro Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Gln Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asp His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Leu Glu Glu Ile
355 360 365




127


369


DNA


Artificial Sequence




Description of Artificial Sequence gene
sequence optimized for expression in Zea mays






127
atgtccgccc gcgaggtgca catcgacgtg aacaacaaga ccggccacac cctccagctg 60
gaggacaaga ccaagctcga cggcggcagg tggcgcacct ccccgaccaa cgtggccaac 120
gaccagatca agaccttcgt ggccgaatcc aacggcttca tgaccggcac cgagggcacc 180
atctactact ccatcaacgg cgaggccgag atcagcctct acttcgacaa cccgttcgcc 240
ggctccaaca aatacgacgg ccactccaac aagtcccagt acgagatcat cacccagggc 300
ggctccggca accagtccca cgtgacctac accatccaga ccacctcctc ccgctacggc 360
cacaagtcc 369




128


1149


DNA


Artificial Sequence




Description of Artificial Sequence gene
sequence optimized for expression in Zea mays






128
atgctcgaca ccaacaaggt gtacgagatc agcaaccacg ccaacggcct ctacgccgcc 60
acctacctct ccctcgacga ctccggcgtg tccctcatga acaagaacga cgacgacatc 120
gacgactaca acctcaagtg gttcctcttc ccgatcgacg acgaccagta catcatcacc 180
tcctacgccg ccaacaactg caaggtgtgg aacgtgaaca acgacaagat caacgtgtcc 240
acctactcct ccaccaactc catccagaag tggcagatca aggccaacgg ctcctcctac 300
gtgatccagt ccgacaacgg caaggtgctc accgccggca ccggccaggc cctcggcctc 360
atccgcctca ccgacgagtc ctccaacaac ccgaaccagc aatggaacct gacgtccgtg 420
cagaccatcc agctcccgca gaagccgatc atcgacacca agctcaagga ctacccgaag 480
tactccccga ccggcaacat cgacaacggc acctccccgc agctcatggg ctggaccctc 540
gtgccgtgca tcatggtgaa cgacccgaac atcgacaaga acacccagat caagaccacc 600
ccgtactaca tcctcaagaa gtaccagtac tggcagaggg ccgtgggctc caacgtcgcg 660
ctccgcccgc acgagaagaa gtcctacacc tacgagtggg gcaccgagat cgaccagaag 720
accaccatca tcaacaccct cggcttccag atcaacatcg acagcggcat gaagttcgac 780
atcccggagg tgggcggcgg taccgacgag atcaagaccc agctcaacga ggagctcaag 840
atcgagtact cccacgagac gaagatcatg gagaagtacc aggagcagtc cgagatcgac 900
aacccgaccg accagtccat gaactccatc ggcttcctca ccatcacctc cctggagctc 960
taccgctaca acggctccga gatccgcatc atgcagatcc agacctccga caacgacacc 1020
tacaacgtga cctcctaccc gaaccaccag caggccctgc tgctgctgac caaccactcc 1080
tacgaggagg tggaggagat caccaacatc ccgaagtcca ccctcaagaa gctcaagaag 1140
tactacttc 1149




129


357


DNA


Artificial Sequence




Description of Artificial Sequence
maize-optimized gene sequence






129
atgtccgccc gcgaggtgca catcgagatc aacaacaaga cccgccacac cctccagctc 60
gaggacaaga ccaagctctc cggcggcagg tggcgcacct ccccgaccaa cgtggcccgc 120
gacaccatca agacgttcgt ggcggagtcc cacggcttca tgaccggcgt cgagggcatc 180
atctacttct ccgtgaacgg cgacgccgag atctccctcc acttcgacaa cccgtacatc 240
ggctccaaca agtccgacgg ctcctccgac aagcccgagt acgaggtgat cacccagtcc 300
ggctccggcg acaagtccca cgtgacctac accatccaga ccgtgtccct ccgcctc 357




130


119


PRT


Artificial Sequence




Description of Artificial Sequence protein
encoded by maize-optimized gene






130
Met Ser Ala Arg Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Ser Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Val Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Asp Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Ile
65 70 75 80
Gly Ser Asn Lys Ser Asp Gly Ser Ser Asp Lys Pro Glu Tyr Glu Val
85 90 95
Ile Thr Gln Ser Gly Ser Gly Asp Lys Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Val Ser Leu Arg Leu
115




131


21


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide primer






131
atgtcagctc gcgaagtaca c 21




132


22


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide primer






132
gtccatccca ttaattgagg ag 22




133


399


DNA


Bacillus thuringiensis



133
atgtcagcac gtgaagtaca cattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attcccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaacat atacagttca aagaaacata 360
tcacgatata ccaataaatt atgttctaat aactcctaa 399




134


132


PRT


Bacillus thuringiensis



134
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Pro Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Val Gln Arg Asn Ile Ser Arg Tyr Thr Asn Lys Leu Cys
115 120 125
Ser Asn Asn Ser
130




135


1164


DNA


Bacillus thuringiensis



135
atgatagaaa ctaataagat atatgaaata agcaataaag ctaatggatt atatgcaact 60
acttatttaa gttttgataa ttcaggtgtt agtttattaa ataaaaatga atctgatatt 120
aatgattata atttgaaatg gtttttattt cctattgata ataatcagta tattattaca 180
agttatggag taaataaaaa taaggtttgg actgctaatg gtaataaaat aaatgttaca 240
acatattccg cagaaaattc agcacaacaa tggcaaataa gaaacagttc ttctggatat 300
ataatagaaa ataataatgg gaaaatttta acggcaggaa caggccaatc attaggttta 360
ttatatttaa ctgatgaaat acctgaagat tctaatcaac aatggaattt aacttcaata 420
caaacaattt cacttccttc acaaccaata attgatacaa cattagtaga ttaccctaaa 480
tattcaacga ccggtagtat aaattataat ggtacagcac ttcaattaat gggatggaca 540
ctcataccat gtattatggt atacgataaa acgatagctt ctacacacac tcaaattaca 600
acaacccctt attatatttt gaaaaaatat caacgttggg tacttgcaac aggaagtggt 660
ctatctgtac ctgcacatgt caaatcaact ttcgaatacg aatggggaac agacacagat 720
caaaaaacca gtgtaataaa tacattaggt tttcaaatta atacagatac aaaattaaaa 780
gctactgtac cagaagtagg tggaggtaca acagatataa gaacacaaat cactgaagaa 840
cttaaagtag aatatagtag tgaaaataaa gaaatgcgaa aatataaaca aagctttgac 900
gtagacaact taaattatga tgaagcacta aatgctgtag gatttattgt tgaaacttca 960
ttcgaattat atcgaatgaa tggaaatgtc cttataacaa gtataaaaac tacaaataaa 1020
gacacctata atacagttac ttatccaaat cataaagaag ttttattact tcttacaaat 1080
cattcttatg aagaagtaac agcactaact ggcatttcca aagaaagact tcaaaatctt 1140
aaaaacaatt ggaaaaaaag ataa 1164




136


387


PRT


Bacillus thuringiensis



136
Met Ile Glu Thr Asn Lys Ile Tyr Glu Ile Ser Asn Lys Ala Asn Gly
1 5 10 15
Leu Tyr Ala Thr Thr Tyr Leu Ser Phe Asp Asn Ser Gly Val Ser Leu
20 25 30
Leu Asn Lys Asn Glu Ser Asp Ile Asn Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Val
50 55 60
Asn Lys Asn Lys Val Trp Thr Ala Asn Gly Asn Lys Ile Asn Val Thr
65 70 75 80
Thr Tyr Ser Ala Glu Asn Ser Ala Gln Gln Trp Gln Ile Arg Asn Ser
85 90 95
Ser Ser Gly Tyr Ile Ile Glu Asn Asn Asn Gly Lys Ile Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ser Leu Gly Leu Leu Tyr Leu Thr Asp Glu Ile Pro
115 120 125
Glu Asp Ser Asn Gln Gln Trp Asn Leu Thr Ser Ile Gln Thr Ile Ser
130 135 140
Leu Pro Ser Gln Pro Ile Ile Asp Thr Thr Leu Val Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Thr Thr Gly Ser Ile Asn Tyr Asn Gly Thr Ala Leu Gln Leu
165 170 175
Met Gly Trp Thr Leu Ile Pro Cys Ile Met Val Tyr Asp Lys Thr Ile
180 185 190
Ala Ser Thr His Thr Gln Ile Thr Thr Thr Pro Tyr Tyr Ile Leu Lys
195 200 205
Lys Tyr Gln Arg Trp Val Leu Ala Thr Gly Ser Gly Leu Ser Val Pro
210 215 220
Ala His Val Lys Ser Thr Phe Glu Tyr Glu Trp Gly Thr Asp Thr Asp
225 230 235 240
Gln Lys Thr Ser Val Ile Asn Thr Leu Gly Phe Gln Ile Asn Thr Asp
245 250 255
Thr Lys Leu Lys Ala Thr Val Pro Glu Val Gly Gly Gly Thr Thr Asp
260 265 270
Ile Arg Thr Gln Ile Thr Glu Glu Leu Lys Val Glu Tyr Ser Ser Glu
275 280 285
Asn Lys Glu Met Arg Lys Tyr Lys Gln Ser Phe Asp Val Asp Asn Leu
290 295 300
Asn Tyr Asp Glu Ala Leu Asn Ala Val Gly Phe Ile Val Glu Thr Ser
305 310 315 320
Phe Glu Leu Tyr Arg Met Asn Gly Asn Val Leu Ile Thr Ser Ile Lys
325 330 335
Thr Thr Asn Lys Asp Thr Tyr Asn Thr Val Thr Tyr Pro Asn His Lys
340 345 350
Glu Val Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Thr Ala
355 360 365
Leu Thr Gly Ile Ser Lys Glu Arg Leu Gln Asn Leu Lys Asn Asn Trp
370 375 380
Lys Lys Arg
385




137


341


DNA


Bacillus thuringiensis



137
atgtcagcag gtgaagttca tattgaaata aataataaaa cacgtcatac attacaatta 60
gaggataaaa ctaaacttac cagtggtaga tggcgaacat cacctacaaa tgttgctcgt 120
gatacaatta aaacatttgt agcagaatca catggtttta tgacaggaat agaaggtatt 180
atatatttta gcgtaaacgg agaagcagaa attagtttac attttgacaa tccttatgta 240
ggttctaata aatatgatgg ttcttctgat aaagctgcat acgaagttat tgctcaaggt 300
ggatcagggg atatatctca tctaacatat acaattcaaa c 341




138


113


PRT


Bacillus thuringiensis



138
Met Ser Ala Gly Glu Val His Ile Glu Ile Asn Asn Lys Thr Arg His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Thr Ser Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Arg Asp Thr Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Ile Glu Gly Ile Ile Tyr Phe Ser
50 55 60
Val Asn Gly Glu Ala Glu Ile Ser Leu His Phe Asp Asn Pro Tyr Val
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly Ser Ser Asp Lys Ala Ala Tyr Glu Val
85 90 95
Ile Ala Gln Gly Gly Ser Gly Asp Ile Ser His Leu Thr Tyr Thr Ile
100 105 110
Gln




139


1158


DNA


Bacillus thuringiensis



139
atgttagata ctaataaaat ttatgaaata agcaatcatg ctaatggatt atatacatca 60
acttatttaa gtctggatga ttcaggtgtt agtttaatgg gtcaaaatga tgaggatata 120
gatgaataca atttaaagtg gttcttattt ccaatagata ataatcaata tattattaca 180
agctatggag cgaataattg taaagtttgg aatgttaaaa atgataaagt aaatgtttca 240
acgtattctc caacaaactc agtacaaaaa tggcaaataa aagctaaaaa ttcttcatat 300
ataatacaaa gtgagaatgg aaaagtctta acagcaggaa taggtcaatc tcttggaata 360
gtacgcttaa ccgatgaatc atcagagagt tctaaccaac aatggaattt aatccctgta 420
caaacaattt cactcccaca aaaacctaaa atagataaaa aattaaaaga tcatcctgaa 480
tattcagaaa ccggaaatat agctactgga acaattcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaaa ataggtaaaa acactcaaat taaaactact 600
ccatattata tttttaaaaa atatcaatac tggaaacgag caataggaag taatgtatct 660
ttacttccac atcaaaaaaa atcatatgat tatgagtggg gtacagaaga aaatcaaaaa 720
acaactatta ttaatacagt aggatttcaa attaatgtag attcaggaat gaagtttgag 780
gtaccagaag taggaggagg tacagaagaa ataaaaacac aattaaatga agaattaaaa 840
gttgaatata gcactgacac caaaataatg aaaaaatatc aagaacactc agagatagat 900
aatccaacta atcaaacaac gaattctata ggatttctta cttttacttc tttagaatta 960
tatcgatata acggttcgga aattcgtata atgagaatgg aaacttcaga taatgatact 1020
tatactctga cctcttatcc aaatcataga gaagcattat tacttctcac aaatcattct 1080
tatcaagaag taagccgaat tccagcacac tggcggccgt tactagtgga tccgagctcg 1140
gtaccaagct tggcgtaa 1158




140


385


PRT


Bacillus thuringiensis



140
Met Leu Asp Thr Asn Lys Ile Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Thr Ser Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Gly Gln Asn Asp Glu Asp Ile Asp Glu Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Lys Asn Asp Lys Val Asn Val Ser
65 70 75 80
Thr Tyr Ser Pro Thr Asn Ser Val Gln Lys Trp Gln Ile Lys Ala Lys
85 90 95
Asn Ser Ser Tyr Ile Ile Gln Ser Glu Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Ile Gly Gln Ser Leu Gly Ile Val Arg Leu Thr Asp Glu Ser Ser
115 120 125
Glu Ser Ser Asn Gln Gln Trp Asn Leu Ile Pro Val Gln Thr Ile Ser
130 135 140
Leu Pro Gln Lys Pro Lys Ile Asp Lys Lys Leu Lys Asp His Pro Glu
145 150 155 160
Tyr Ser Glu Thr Gly Asn Ile Ala Thr Gly Thr Ile Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Lys Ile Gly
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Phe Lys Lys Tyr
195 200 205
Gln Tyr Trp Lys Arg Ala Ile Gly Ser Asn Val Ser Leu Leu Pro His
210 215 220
Gln Lys Lys Ser Tyr Asp Tyr Glu Trp Gly Thr Glu Glu Asn Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Val Gly Phe Gln Ile Asn Val Asp Ser Gly
245 250 255
Met Lys Phe Glu Val Pro Glu Val Gly Gly Gly Thr Glu Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Val Glu Tyr Ser Thr Asp Thr Lys
275 280 285
Ile Met Lys Lys Tyr Gln Glu His Ser Glu Ile Asp Asn Pro Thr Asn
290 295 300
Gln Thr Thr Asn Ser Ile Gly Phe Leu Thr Phe Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Arg Met Glu Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Thr Leu Thr Ser Tyr Pro Asn His Arg Glu Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Gln Glu Val Ser Arg Ile Pro
355 360 365
Ala His Trp Arg Pro Leu Leu Val Asp Pro Ser Ser Val Pro Ser Leu
370 375 380
Ala
385




141


399


DNA


Bacillus thuringiensis



141
atgtcagatc gcgaagtaca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtaacat atacagttca aagaaacata 360
tcacgatata ccaataaatt atgttctaat aactcctaa 399




142


132


PRT


Bacillus thuringiensis



142
Met Ser Asp Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr Tyr Thr Val Gln Arg Asn Ile Ser Arg Tyr Thr Asn Lys Leu Cys
115 120 125
Ser Asn Asn Ser
130




143


871


DNA


Bacillus thuringiensis



143
atgatagaaa ctaataagat atatgaaata agcaataaag ctaatggatt atatgcaact 60
acttatttaa gttttgataa ttcaggtgtt agtttattaa ataaaaatga atctgatatt 120
aatgattata atttgaaatg gtttttattt cctattgata ataatcagta tattattaca 180
agttatggag taaataaaaa taaggtttgg actgctaatg gtaataaaat aaatgttaca 240
acatattccg cagaaaattc agcacaacaa tggcaaataa gaaacagttc ttctggatat 300
ataatagaaa ataataatgg gaaaatttta acggcaggaa caggccaatc attaggttta 360
ttatatttaa ctgatgaaat acctgaagat tctaatcaac aatggaattt aacttcaata 420
caaacaattt cacttccttc acaaccaata attgatacaa cattagtaga ttaccctaaa 480
tattcaacga ccggtagtat aaattataat ggtacagcac ttcaattaat gggatggaca 540
ctcataccat gtattatggt atacgataaa acgatagctt ctacacacac tcaaattaca 600
acaacccctt attatatttt gaaaaaatat caacgttggg tacttgcaac aggaagtggt 660
ctatctgtac ctgcacatgt caaatcaact ttcgaatacg aatggggaac agacacagat 720
caaaaaacca gtgtaataaa tacattaggt tttcaaatta atacagatac aaaattaaaa 780
gctactgtac cagaagtagg tggaggtaca acagatataa gaacacaaat cactgaagaa 840
cttaaagtag aatatagtag tgaaaataaa g 871




144


290


PRT


Bacillus thuringiensis



144
Met Ile Glu Thr Asn Lys Ile Tyr Glu Ile Ser Asn Lys Ala Asn Gly
1 5 10 15
Leu Tyr Ala Thr Thr Tyr Leu Ser Phe Asp Asn Ser Gly Val Ser Leu
20 25 30
Leu Asn Lys Asn Glu Ser Asp Ile Asn Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asn Asn Gln Tyr Ile Ile Thr Ser Tyr Gly Val
50 55 60
Asn Lys Asn Lys Val Trp Thr Ala Asn Gly Asn Lys Ile Asn Val Thr
65 70 75 80
Thr Tyr Ser Ala Glu Asn Ser Ala Gln Gln Trp Gln Ile Arg Asn Ser
85 90 95
Ser Ser Gly Tyr Ile Ile Glu Asn Asn Asn Gly Lys Ile Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ser Leu Gly Leu Leu Tyr Leu Thr Asp Glu Ile Pro
115 120 125
Glu Asp Ser Asn Gln Gln Trp Asn Leu Thr Ser Ile Gln Thr Ile Ser
130 135 140
Leu Pro Ser Gln Pro Ile Ile Asp Thr Thr Leu Val Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Thr Thr Gly Ser Ile Asn Tyr Asn Gly Thr Ala Leu Gln Leu
165 170 175
Met Gly Trp Thr Leu Ile Pro Cys Ile Met Val Tyr Asp Lys Thr Ile
180 185 190
Ala Ser Thr His Thr Gln Ile Thr Thr Thr Pro Tyr Tyr Ile Leu Lys
195 200 205
Lys Tyr Gln Arg Trp Val Leu Ala Thr Gly Ser Gly Leu Ser Val Pro
210 215 220
Ala His Val Lys Ser Thr Phe Glu Tyr Glu Trp Gly Thr Asp Thr Asp
225 230 235 240
Gln Lys Thr Ser Val Ile Asn Thr Leu Gly Phe Gln Ile Asn Thr Asp
245 250 255
Thr Lys Leu Lys Ala Thr Val Pro Glu Val Gly Gly Gly Thr Thr Asp
260 265 270
Ile Arg Thr Gln Ile Thr Glu Glu Leu Lys Val Glu Tyr Ser Ser Glu
275 280 285
Asn Lys
290




145


372


DNA


Bacillus thuringiensis



145
atgtcagcac gtgaagtaca cattgatgta aataataaga caggtcatac attacaatta 60
gaagataaaa caaaacttga tggtggtaga tggcgaacat cacctacaaa tgttgctaat 120
gatcaaatta aaacatttgt agcagaatca catggtttta tgacaggtac agaaggtact 180
atatattata gtataaatgg agaagcagaa attagtttat attttgataa tccttattca 240
ggttctaata aatatgatgg gcattccaat aaacctcaat atgaagttac tacccaagga 300
ggatcaggaa atcaatctca tgttacgtat actattcaaa ctgcatcttc acgatatggg 360
aataactcat aa 372




146


123


PRT


Bacillus thuringiensis



146
Met Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His
1 5 10 15
Thr Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg
20 25 30
Thr Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala
35 40 45
Glu Ser His Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser
50 55 60
Ile Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Tyr Ser
65 70 75 80
Gly Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Pro Gln Tyr Glu Val
85 90 95
Thr Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile
100 105 110
Gln Thr Ala Ser Ser Arg Tyr Gly Asn Asn Ser
115 120




147


1152


DNA


Bacillus thuringiensis



147
atgttagata ctaataaagt ttatgaaata agtaatcatg ctaatggact atatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgattata acttaaaatg gtttttattt cctattgatg atgatcaata tattattaca 180
agctatgcag caaataattg taaagtttgg aatgttaata atgataaaat aaatgtttcg 240
acttattctt caacaaattc aatacaaaaa tggcaaataa aagctaatgg ttcttcatat 300
gtaatacaaa gtgataatgg aaaagtctta acagcaggaa ccggtcaagc tcttggattg 360
atacgtttaa ctgatgaatc ctcaaataat cccaatcaac aatggaattt aacttctgta 420
caaacaattc aacttccaca aaaacctata atagatacaa aattaaaaga ttatcccaaa 480
tattcaccaa ctggaaatat agataatgga acatctcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaat atagataaaa atactcaaat taaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacgag cagtaggaag taatgtagct 660
ttacgtccac atgaaaaaaa atcatatact tatgaatggg gaacagaaat agatcaaaaa 720
acaacaatca taaatacatt aggatttcaa atcaatatag attcaggaat gaaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aactaaatga agaattaaaa 840
atagaatata gtcgtgaaac taaaataatg gaaaaatatc aagaacaatc tgaaatagat 900
aatccaactg atcaaccaat gaattctata ggatttctta ctattacttc tttagaatta 960
tatagatata atggctcaga aattcgtata atgcaaattc aaacctcaga taatgatact 1020
tataatgtta cttcttatcc agatcatcaa caagctttat tacttcttac aaatcattca 1080
tatgaagaag tagaagaaat aacaaatatt cctaaaagta cactaaaaaa attaaaaaaa 1140
tattattttt aa 1152




148


383


PRT


Bacillus thuringiensis



148
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Ser
115 120 125
Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser Arg Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Pro Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Gln Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asp His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Asn Ile Pro Lys Ser Thr Leu Lys Lys Leu Lys Lys Tyr Tyr Phe
370 375 380




149


354


DNA


Bacillus thuringiensis



149
atgtcagctc gcgaagttca tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtgacat atacaattca aaca 354




150


113


PRT


Bacillus thuringiensis



150
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr




151


353


DNA


Bacillus thuringiensis



151



152


113


PRT


Bacillus thuringiensis



152
Met Ser Ala Arg Glu Val His Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr




153


353


DNA


Bacillus thuringiensis



153
atgtcagcac gcgaagtaga tattgaaata ataaatcata caggtcatac cttacaaatg 60
gataaaagaa ctagacttgc acatggtgaa tggattatta cacccgtgaa tgttccaaat 120
aattcttctg atttatttca agcaggttct gatggagttt tgacaggagt agaaggaata 180
ataatttata ctataaatgg agaaatagaa attaccttac attttgacaa tccttatgca 240
ggttctaata aatattctgg acgttctagt gatgatgatt ataaagttat aactgaagca 300
agagcagaac atagagctaa taatcatgat catgtgactt atacaattca aac 353




154


113


PRT


Bacillus thuringiensis



154
Met Ser Ala Arg Glu Val Asp Ile Glu Ile Ile Asn His Thr Gly His
1 5 10 15
Thr Leu Gln Met Asp Lys Arg Thr Arg Leu Ala His Gly Glu Trp Ile
20 25 30
Ile Thr Pro Val Asn Val Pro Asn Asn Ser Ser Asp Leu Phe Gln Ala
35 40 45
Gly Ser Asp Gly Val Leu Thr Gly Val Glu Gly Ile Ile Ile Tyr Thr
50 55 60
Ile Asn Gly Glu Ile Glu Ile Thr Leu His Phe Asp Asn Pro Tyr Ala
65 70 75 80
Gly Ser Asn Lys Tyr Ser Gly Arg Ser Ser Asp Asp Asp Tyr Lys Val
85 90 95
Ile Thr Glu Ala Arg Ala Glu His Arg Ala Asn Asn His Asp His Val
100 105 110
Thr




155


37


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide primer






155
aaatattatt ttatgtcagc acgtgaagta cacattg 37




156


40


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide primer






156
tctctggtac cttattatga tttatgccca tatcgtgagg 40




157


45


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide primer






157
agagaactag taaaaaggag ataaccatgt tagatactaa taaag 45




158


46


DNA


Artificial Sequence




Description of Artificial Sequence
oligonucleotide primer






158
cgtgctgaca taaaataata tttttttaat ttttttagtg tacttt 46




159


506


PRT


Artificial Sequence




Description of Artificial Sequence fusion
protein






159
Met Leu Asp Thr Asn Lys Val Tyr Glu Ile Ser Asn His Ala Asn Gly
1 5 10 15
Leu Tyr Ala Ala Thr Tyr Leu Ser Leu Asp Asp Ser Gly Val Ser Leu
20 25 30
Met Asn Lys Asn Asp Asp Asp Ile Asp Asp Tyr Asn Leu Lys Trp Phe
35 40 45
Leu Phe Pro Ile Asp Asp Asp Gln Tyr Ile Ile Thr Ser Tyr Ala Ala
50 55 60
Asn Asn Cys Lys Val Trp Asn Val Asn Asn Asp Lys Ile Asn Val Ser
65 70 75 80
Thr Tyr Ser Ser Thr Asn Ser Ile Gln Lys Trp Gln Ile Lys Ala Asn
85 90 95
Gly Ser Ser Tyr Val Ile Gln Ser Asp Asn Gly Lys Val Leu Thr Ala
100 105 110
Gly Thr Gly Gln Ala Leu Gly Leu Ile Arg Leu Thr Asp Glu Ser Ser
115 120 125
Asn Asn Pro Asn Gln Gln Trp Asn Leu Thr Ser Val Gln Thr Ile Gln
130 135 140
Leu Pro Gln Lys Pro Ile Ile Asp Thr Lys Leu Lys Asp Tyr Pro Lys
145 150 155 160
Tyr Ser Pro Thr Gly Asn Ile Asp Asn Gly Thr Ser Pro Gln Leu Met
165 170 175
Gly Trp Thr Leu Val Pro Cys Ile Met Val Asn Asp Pro Asn Ile Asp
180 185 190
Lys Asn Thr Gln Ile Lys Thr Thr Pro Tyr Tyr Ile Leu Lys Lys Tyr
195 200 205
Gln Tyr Trp Gln Arg Ala Val Gly Ser Asn Val Ala Leu Arg Pro His
210 215 220
Glu Lys Lys Ser Tyr Thr Tyr Glu Trp Gly Thr Glu Ile Asp Gln Lys
225 230 235 240
Thr Thr Ile Ile Asn Thr Leu Gly Phe Gln Ile Asn Ile Asp Ser Gly
245 250 255
Met Lys Phe Asp Ile Pro Glu Val Gly Gly Gly Thr Asp Glu Ile Lys
260 265 270
Thr Gln Leu Asn Glu Glu Leu Lys Ile Glu Tyr Ser His Glu Thr Lys
275 280 285
Ile Met Glu Lys Tyr Gln Glu Gln Ser Glu Ile Asp Asn Pro Thr Asp
290 295 300
Gln Ser Met Asn Ser Ile Gly Phe Leu Thr Ile Thr Ser Leu Glu Leu
305 310 315 320
Tyr Arg Tyr Asn Gly Ser Glu Ile Arg Ile Met Gln Ile Gln Thr Ser
325 330 335
Asp Asn Asp Thr Tyr Asn Val Thr Ser Tyr Pro Asn His Gln Gln Ala
340 345 350
Leu Leu Leu Leu Thr Asn His Ser Tyr Glu Glu Val Glu Glu Ile Thr
355 360 365
Asn Ile Pro Lys Ser Thr Leu Lys Lys Leu Lys Lys Tyr Tyr Phe Met
370 375 380
Ser Ala Arg Glu Val His Ile Asp Val Asn Asn Lys Thr Gly His Thr
385 390 395 400
Leu Gln Leu Glu Asp Lys Thr Lys Leu Asp Gly Gly Arg Trp Arg Thr
405 410 415
Ser Pro Thr Asn Val Ala Asn Asp Gln Ile Lys Thr Phe Val Ala Glu
420 425 430
Ser Asn Gly Phe Met Thr Gly Thr Glu Gly Thr Ile Tyr Tyr Ser Ile
435 440 445
Asn Gly Glu Ala Glu Ile Ser Leu Tyr Phe Asp Asn Pro Phe Ala Gly
450 455 460
Ser Asn Lys Tyr Asp Gly His Ser Asn Lys Ser Gln Tyr Glu Ile Ile
465 470 475 480
Thr Gln Gly Gly Ser Gly Asn Gln Ser His Val Thr Tyr Thr Ile Gln
485 490 495
Thr Thr Ser Ser Arg Tyr Gly His Lys Ser
500 505




160


1521


DNA


Artificial Sequence




Description of Artificial Sequence fusion
gene






160
atgttagata ctaataaagt ttatgaaata agcaatcatg ctaatggact atatgcagca 60
acttatttaa gtttagatga ttcaggtgtt agtttaatga ataaaaatga tgatgatatt 120
gatgattata acttaaaatg gtttttattt cctattgatg atgatcaata tattattaca 180
agctatgcag caaataattg taaagtttgg aatgttaata atgataaaat aaatgtttcg 240
acttattctt caacaaattc aatacaaaaa tggcaaataa aagctaatgg ttcttcatat 300
gtaatacaaa gtgataatgg aaaagtctta acagcaggaa ccggtcaagc tcttggattg 360
atacgtttaa ctgatgaatc ctcaaataat cccaatcaac aatggaattt aacttctgta 420
caaacaattc aacttccaca aaaacctata atagatacaa aattaaaaga ttatcccaaa 480
tattcaccaa ctggaaatat agataatgga acatctcctc aattaatggg atggacatta 540
gtaccttgta ttatggtaaa tgatccaaat atagataaaa atactcaaat taaaactact 600
ccatattata ttttaaaaaa atatcaatat tggcaacgag cagtaggaag taatgtagct 660
ttacgtccac atgaaaaaaa atcatatact tatgaatggg gcacagaaat agatcaaaaa 720
acaacaatta taaatacatt aggatttcaa atcaatatag attcaggaat gaaatttgat 780
ataccagaag taggtggagg tacagatgaa ataaaaacac aactaaatga agaattaaaa 840
atagaatata gtcatgaaac taaaataatg gaaaaatatc aagaacaatc tgaaatagat 900
aatccaactg atcaatcaat gaattctata ggatttctta ctattacttc cttagaatta 960
tatagatata atggctcaga aattcgtata atgcaaattc aaacctcaga taatgatact 1020
tataatgtta cttcttatcc aaatcatcaa caagctttat tacttcttac aaatcattca 1080
tatgaagaag tagaagaaat aacaaatatt cctaaaagta cactaaaaaa attaaaaaaa 1140
tattatttta tgtcagcacg tgaagtacac attgatgtaa ataataagac aggtcataca 1200
ttacaattag aagataaaac aaaacttgat ggtggtagat ggcgaacatc acctacaaat 1260
gttgctaatg atcaaattaa aacatttgta gcagaatcaa atggttttat gacaggtaca 1320
gaaggtacta tatattatag tataaatgga gaagcagaaa ttagtttata ttttgacaat 1380
ccttttgcag gttctaataa atatgatgga cattccaata aatctcaata tgaaattatt 1440
acccaaggag gatcaggaaa tcaatctcat gttacgtata ctattcaaac cacatcctca 1500
cgatatgggc ataaatcata a 1521




161


23


DNA


Artificial Sequence




Description of Artificial Sequence primer
45kD5′






161
gatratratc aatatattat tac 23




162


20


DNA


Artificial Sequence




Description of Artificial Sequence primer
45kD3′rc






162
caaggtarta atgtccatcc 20




163


24


DNA


Artificial Sequence




Description of Artificial Sequence primer
45kD5′01






163
gatgatgrtm rakwwattat trca 24




164


24


DNA


Artificial Sequence




Description of Artificial Sequence primer
45kD5′02






164
gatgatgrtm ratatattat trca 24




165


23


DNA


Artificial Sequence




Description of Artificial Sequence primer
45kD3′03






165
ggawgkrcdy twdtmccwtg tat 23




166


23


DNA


Artificial Sequence




Description of Artificial Sequence primer
45kD3′04






166
ggawgkacry tadtaccttg tat 23






Claims
  • 1. An isolated polynucleotide that encodes a fusion protein comprising a first amino acid sequence and a second amino acid sequence, wherein said first amino acid sequence is the amino acid sequence of an approximately 45 kDa polypeptide and said second amino acid sequence is the amino acid sequence of an approximately 15 kDa polypeptide, wherein said polypeptides are toxic to a rootworm pest that ingests said polypeptides, wherein a nucleotide sequence that codes for said first amino acid sequence hybridizes with the complement of the nucleic acid sequence of SEQ ID NO:10, and wherein a nucleotide sequence that codes for said second amino acid sequence hybridizes with the complement of the nucleic acid sequence of SEQ ID NO:31.
  • 2. An isolated polynucleotide that encodes a fusion protein comprising a first amino acid sequence and a second amino acid sequence wherein said fusion protein is toxic to a rootworm pest that ingests said protein; wherein said first amino sequence is the amino sequence of an approximately 45 kDa polypeptide and said second amino acid sequence is the amino acid sequence of an approximately 15 kDa polypeptide; wherein a nucleotide sequence that codes for said first amino acid sequence hybridizes under stringent conditions with the complement of a nucleic acid sequence selected form the group consisting of SEQ ID NO:10, SEQ ID NO:42, and SEQ ID NO:45; and wherein a nucleotide sequences that codes for said second amino acid sequence hybridizes under stringent condition with the complement of nucleic acid sequence selected from the group consisting of SEQ ID NO:31, SEQ ID NO:40, and SEQ ID NO:44.
  • 3. The polynucleotide according to claim 1 wherein said polynucleotide encodes a fusion protein comprising the amino acid sequence of SEQ ID NO:159.
  • 4. The polynucleotide according to claim 1 wherein said polynucleotide comprises the nucleic acid sequence of SEQ ID NO:160.
  • 5. The polynucleotide according to claim 2 wherein a nucleotide sequence that codes for said first amino acid sequence hybridizes under stringent conditions with the complement of the nucleic acid sequence of SEQ ID NO:10.
  • 6. The polynucleotide according to claim 2 wherein a nucleotide sequence that codes for said second amino acid sequence hybridizes under stringent conditions with the complement of the nucleic acid sequence of SEQ ID NO:31.
  • 7. The polynucleotide according to claim 2 wherein a nucleotide sequence that codes for said first amino acid sequence hybridizes under stringent conditions with the complement of the nucleic acid sequence of SEQ ID NO:42.
  • 8. The polynucleotide according to claim 2 wherein a nucleotide sequence that codes for said second amino acid sequence hybridizes under stringent conditions with the complement of the nucleic acid sequence of SEQ ID NO:40.
  • 9. The polynucleotide according to claim 2 wherein a nucleotide sequence that codes for said first amino acid sequence hybridizes under stringent conditions with the complement of the nucleic acid sequence SEQ ID NO:45.
  • 10. The polynucleotide according to claim 2 wherein a nucleotide sequence that codes for said amino acid sequence hybridizes under stringent conditions with the complement of the nucleic acid sequence of SEQ ID NO:44.
  • 11. The polynucleotide according to claim 2 wherein said polynucleotide comprises the nucleic acid sequence of SEQ ID NO:44.
  • 12. The polynucleotide according of claim 2 wherein said polynucleotide comprises the nucleic acid sequence of SEQ ID NO:45.
  • 13. The polynucleotide according to claim 2 wherein said first amino acid sequence is SEQ ID NO:11.
  • 14. The polynucleotide according to claim 2 wherein said second amino acid sequence is SEQ ID NO:32.
  • 15. The polynucleotide according to claim 2 wherein said first amino acid sequence is SEQ ID NO:43.
  • 16. The polynucleotide according to claim 2 wherein said second amino acid sequence is SEQ ID NO:41.
  • 17. The polynucleotide of claim 1 wherein said polynucleotide comprises a first segment and a second segment, wherein said first segment encodes said first amino acid sequence and said second segment encodes said second amino acid sequence, and wherein said second segment is 5′ to said first segment.
  • 18. The polynucleotide of claim 1 wherein said second amino acid sequence is at the carboxy terminus of said protein and said first amino acid sequence is at the amino terminus of said protein.
  • 19. A transgenic host cell comprising a polynucleotide of claim 1, wherein said cell is selected from the group consisting of a plant cell and a bacterial cell.
  • 20. The polynucleotide according to claim 2, wherein said first amino acid sequence is SEQ ID NO:11.
  • 21. The polynucleotide according to claim 2 wherein said second amino acid sequence is SEQ ID NO:32.
  • 22. The polynucleotide of claim 2 wherein said polynucleotide comprises a first segment and a second segment, wherein said first segment encodes said first amino aid sequence and said second segment encodes said second amino acid sequence, and wherein said second segment is 5′ to said first segment.
  • 23. The polynucleotide of claim 2 wherein said second amino acid sequence is at the carboxy terminus of said protein and said first amino acid sequence is at the amino terminus of said protein.
  • 24. A transgenic host cell comprising a polynucleotide of claim 2, wherein said cell is selected from the group consisting of a plant cell and a bacterial cell.
CROSS-REFERENCE TO A RELATED APPLICATION

This application is a continuation-in-part of U.S. Ser. No. 09/378,088, filed Aug. 20, 1999 now U.S. Pat. No. 6,372,480, which is a continuation-in-part of Ser. No. 08/844,188, filed Apr. 18, 1997 now U.S. Pat. No. 6,127,180, which is a continuation-in-part of Ser. No. 08/633,993, filed Apr. 19, 1996, which issued as U.S. Pat. No. 6,083,499 on Jul. 4, 2000.

US Referenced Citations (2)
Number Name Date Kind
5723758 Payne et al. Mar 1998 A
6172281 Van Mellaert et al. Jan 2001 B1
Foreign Referenced Citations (1)
Number Date Country
WO 0024904 May 2000 WO
Non-Patent Literature Citations (1)
Entry
Hofte et al., “Insecticidal Crystal Proteins of Bacillus thuringiensis,” Microbiological Reviews, Jun. 1989, p. 242-255, vol. 53, No. 2.
Continuation in Parts (3)
Number Date Country
Parent 09/378088 Aug 1999 US
Child 09/643596 US
Parent 08/844188 Apr 1997 US
Child 09/378088 US
Parent 08/633993 Apr 1996 US
Child 08/844188 US