Information
-
Patent Application
-
20040009478
-
Publication Number
20040009478
-
Date Filed
April 25, 200222 years ago
-
Date Published
January 15, 200420 years ago
-
Inventors
-
Original Assignees
-
CPC
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US Classifications
-
International Classifications
- C12Q001/68
- G01N033/574
- C07H021/04
- C07K014/47
- C07K016/30
- C12P021/02
- C12N005/06
Abstract
Human nucleic acid sequences—mRNA, cDNA, genomic sequences—from tissue of prostate tumors, which code for gene products or parts thereof and their use, are described. In addition, the polypeptides that can be obtained by way of the sequences and their use are described.
Description
[0001] The invention relates to human nucleic acid sequences—mRNA, cDNA, genomic sequences—from tissue of prostate tumors that code for gene products or parts thereof and their use.
[0002] The invention furthermore relates to polypeptides that can be obtained via the sequences and their use.
[0003] One very common type of cancer is prostate cancer, for control of which new therapies are necessary. Previously used therapies based on the blocking of hormone effects are very often ineffective after a few years since the tumor becomes independent of the hormone, i.e., it continues to grow and forms metastases without the action of hormones.
[0004] The cancer phenomenon often goes along with overexpression or underexpression of certain genes in degenerated cells, it still being unclear whether these altered expression rates are the cause or the result of the malignant transformation. Identification of these genes would be an important step for development of new therapies against cancer. Spontaneous formation of cancer is often preceded by a host of mutations. They can have the most varied effects on the expression pattern in the affected tissue, such as, e.g., underexpression or overexpression, but also expression of shortened genes. Several such changes due to these mutation cascades can ultimately lead to malignant degeneration. The complexity of these relationships makes an experimental approach very difficult.
[0005] A database that consists of so-called ESTs is used to look for tumor-related candidate genes, i.e., genes that can be regarded as the cause or the result of malignant degeneration of normal human tissue. ESTs (expressed sequence tags) are sequences of cDNAs, i.e., mRNAs transcribed in reverse, therefore molecules that reflect gene expression. The EST sequences are determined for normal and degenerated tissue. These databases are offered to some extent commercially by various companies. The ESTs of the LifeSeq database, which is used here, are generally between 150 and 350 nucleotides long. They represent a pattern that is unmistakable for a certain gene, although this gene is normally very much longer (>2000 nucleotides). By comparison of the expression patterns of normal and tumor tissue, ESTs can be identified that are important for tumor formation and proliferation (see FIG. 1). There is, however, the following problem: Since the EST sequences found can belong to different regions of an unknown gene due to different constructions of cDNA libraries, in this case a completely incorrect ratio of the occurrence of these ESTs in the respective tissue would arise. This would only be noticed when the complete gene is known and thus ESTs can be assigned to the same gene.
[0006] It has now been found that this error possibility can be reduced if all ESTs from the respective tissue type are assembled beforehand, before the expression patterns are compared to one another. Therefore, overlapping ESTs of the same gene were combined into longer sequences (see FIG. 1, FIG. 2a and FIG. 3). This lengthening and thus coverage of an essentially larger gene area in each of the respective bases are intended to largely avoid the above-described error. Since there were no existing software products for this purpose, programs for assembling genomic sections were employed which were used modified and to which our own programs were added. A flowchart of the assembly procedure is shown in FIG. 2b1-2b4.
[0007] Nucleic acid sequences Seq. ID No. 3, 4, 6, 7, 10, 12, 13, 15, 17-24, 26, 27, 29, 31-34, 36, 37, 39, 40, 44-53; 142, 144-164 which play a part as candidate genes in prostate cancer have now been found.
[0008] Nucleic acid sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 are of special interest.
[0009] The invention thus relates to nucleic acid sequences that code a gene product or a part thereof, comprising
[0010] a) a nucleic acid sequence selected from the group of nucleic acid sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164.
[0011] b) an allelic variation of the nucleic acid sequences named under a) or
[0012] c) a nucleic acid sequence that is complementary to the nucleic acid sequences named under a) or b).
[0013] The invention furthermore relates to a nucleic acid sequence according to one of the sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 or a complementary or allelic version thereof and the nucleic acid sequences thereof that have 90% to 95% homology to a human nucleic acid sequence.
[0014] The invention also relates to nucleic acid sequences Seq. ID No. 3-53; 142, 144-164, which are expressed elevated in the prostate tumor tissue.
[0015] The invention furthermore relates to nucleic acid sequences comprising part of the aforementioned nucleic acid sequences in such a sufficient amount that they hybridize with sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164.
[0016] The nucleic acid sequences according to the invention generally have a length of at least 50 to 2000 bp, preferably a length of at least 150 to 1700 bp.
[0017] With the partial sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 according to the invention, expression cassettes can also be built using current process practice, whereby on the cassette at least one of the nucleic acid sequences according to the invention is combined with at least one control or regulator sequence known to one skilled in the art, such as, e.g., a suitable promoter. The sequences according to the invention can be inserted in a sense or antisense orientation.
[0018] A large number of expression cassettes or vectors and promoters, which can be used, are known in the literature.
[0019] Expression cassettes or vectors are defined as the following: 1. bacterial, such as, e.g., phagescript, pBs, ΦX174, pBluescript SK, pBs KS, pNH8a, pNH16a, pNH18a, pNH46a (Stratagene), pTrc99A, pKK223-3, pKK233-3, pDR540, pRIT5 (Pharmacia), 2. eukaryotic, such as, e.g., pWLneo, pSV2cat, pOG44, pXT1, pSG (Stratagene), pSVK3, pBPV, pMSG, pSVL (Pharmacia).
[0020] A control or regulatory sequence is defined as suitable promotors. Here two preferred vectors are the pKK232-8 and the PCM7 vector. In particular the following promoters are intended: lacI, lacZ, T3, T7, gpt, lambda PR, trc, CMV, HSV thymidine-kinase, SV40, LTRs from retrovirus and mouse metallothionein-I.
[0021] The DNA sequences on the expression cassette can code a fusion protein, which comprises a known protein and a bioactive polypeptide fragment.
[0022] The expression cassettes are likewise the subject matter of this invention.
[0023] The nucleic acid fragments according to the invention can be used to produce full-length genes. The obtainable genes are likewise the subject matter of this invention.
[0024] The invention also relates to the use of the nucleic acid sequences according to the invention and the gene fragments obtainable from use.
[0025] The nucleic acid sequences according to the invention can be moved into host cells with suitable vectors in which as the heterologous part the genetic information which is expressed and which is contained on the nucleic acid fragments is located.
[0026] The host cells containing the nucleic acid fragments are likewise the subject matter of this invention.
[0027] Suitable host cells are, e.g., prokaryotic cell systems such as E. coli or eukaryotic cell systems such as animal or human cells or yeasts.
[0028] The nucleic acid sequences according to the invention can be used in the sense or antisense form.
[0029] Production of polypeptides or their fragments is done by cultivation of the host cells according to current cultivation methods and subsequent isolation and purification of the peptides or fragments, likewise using current methods. The invention furthermore relates to nucleic acid sequences, which code at least a partial sequence of a bioactive polypeptide.
[0030] Furthermore, this invention relates to polypeptide partial sequences, so-called ORF (open-reading-frame) peptides according to the sequence protocols Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199.
[0031] The invention furthermore relates to polypeptide sequences that have at least 80% homology, especially 90% homology, to the polypeptide partial sequences according to the invention of Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199.
[0032] The invention also relates to antibodies that are directed against a polypeptide or a fragment, which are coded by the nucleic acids of sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 according to the invention.
[0033] Antibodies are defined especially as monoclonal antibodies.
[0034] The invention also relates to phage display proteins, which are directed against a polypeptide or a fragment, and which are coded by the nucleic acids of sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 according to the invention.
[0035] The polypeptides of sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 according to the invention can also be used as tools for finding active agents against prostate cancer; this is likewise the subject matter of this invention.
[0036] Likewise the subject matter of this invention is the use of nucleic acid sequences according to sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 for expression of polypeptides, which can also be used as tools for finding active agents against prostate cancer.
[0037] The invention also relates to the use of the found polypeptide partial sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 as pharmaceutical agents in gene therapy for treatment of prostate cancer, or to produce a pharmaceutical agent for treatment of prostate cancer.
[0038] The invention also relates to pharmaceutical agents that contain at least one polypeptide partial sequence of Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199.
[0039] The nucleic acid sequences found according to the invention can also be genomic or mRNA sequences.
[0040] The invention also relates to genomic genes, their promoters, enhancers, silencers, exon structure, intron structure and their splice variants, obtainable from cDNAs of sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 and their use together with suitable regulatory elements, such as suitable promoters and/or enhancers.
[0041] With the nucleic acids according to the invention (cDNA sequences), genomic BAC, PAC and Cosmid libraries are screened and specifically human clones are isolated via complementary base pairing (hybridization). The BAC, PAC and Cosmid clones isolated in this way are hybridized using fluorescence-in-situ hybridization on metaphase chromosomes and the corresponding chromosome sections on which the corresponding genomic genes lie are identified. BAC, PAC and Cosmid clones are sequenced in order to clarify the corresponding genomic genes in their complete structure (promoters, enhancers, silencers, exons and introns). BAC, PAC and Cosmid clones can be used as independent molecules for gene transfer (see FIG. 5).
[0042] The invention also relates to BAC, PAC and Cosmid clones containing functional genes and their chromosomal localization according to sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 for use as vehicles for gene transfer.
1|
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Meanings of Technical Terms and Abbreviations
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Nucleic acids =Nucleic acids in this invention are defined as:
mRNA, partial cDNA, full-length cDNA and genomic
genes (chromosomes).
ORF =Open Reading Frame, a defined sequence of amino
acids that can be derived from the cDNA sequence.
Contig =A set of DNA sequences that can be combined as a
result of very great similarities into one
sequence (consensus).
Singleton =A contig that contains only one sequence.
Module =Domain of a protein with a defined sequence that
represents one structural unit and that occurs in
different proteins
N =selectively the nucleotide A, T, G or C
X =selectively one of the 20 naturally occurring
amino acids
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[0043] Explanation of the Alignment Parameters
[0044] minimal initial match=minimal initial identity area
[0045] maximum pads per read=maximum number of insertions
[0046] maximum percent mismatch=maximum deviation in %
EXPLANATION OF FIGURES
[0047]
FIG. 1 shows a systematic gene search in the Incyte LifeSeq database.
[0048]
FIG. 2
a
shows the principle of EST assembling
[0049]
FIG. 2b1-2b4 shows the entire principle of EST assembling
[0050]
FIG. 3 shows the in-silico subtraction of gene expression in different tissues
[0051]
FIG. 4
a
shows the determination of tissue-specific expression via electronic Northern
[0052]
FIG. 4
b
shows the electronic Northern
[0053]
FIG. 5 shows the isolation of genomic BAC and PAC clones.
[0054] The following examples explain the production of the nucleic acid sequences according to the invention without limiting the invention to these examples and nucleic acid sequences.
Search for Tumor-Related Candidate Genes
[0055] First, all ESTs of the corresponding tissue from the LifeSeq database (from October 1997) were extracted. They were then assembled by means of the GAP4 program of the Staden package with the parameters 0% mismatch, 8 pads per read and a minimal match of 20. The sequences (fails) not recorded in the GAP4 database were assembled first at 1% mismatch and then again at 2% mismatch with the database. Consensus sequences were computed from the contigs of the database, which consisted of more than one sequence (see FIG. 2a and 2b1-2b4).
[0056] The singletons of the database, which consisted of only one sequence, were re-assembled at 2% mismatch with the sequences not recorded in the GAP4 database. In turn, for the contigs the consensus sequences were determined. All other ESTs were re-assembled at 4% mismatch. The consensus sequences were extracted once again and finally assembled with the previous consensus sequences and the singletons and the sequences not recorded in the database at 4% mismatch. The consensus sequences were formed and used with the singletons and fails as the initial basis for tissue comparisons. This procedure ensured that among the parameters used all sequences represented gene regions independent of one another.
[0057]
FIG. 2b1-2b4 illustrates the lengthening of the prostate tumor ESTs.
[0058] The sequences of the respective tissue assembled in this way were then compared to one another by means of the same program (see FIG. 3). To do this, first, all sequences of the first tissue were input into the database. (Therefore it was important that they were independent of one another).
[0059] Then all sequences of the second tissue were compared to all those of the first. The result was sequences that were specific to the first or the second tissue as well as those which occurred in both. In the latter, the ratio of the frequency of occurrence in the respective tissue was evaluated.
[0060] All sequences that occurred more than four times in one of the compared tissues in each case and all that occurred at least five times as often in one of the two tissues were further studied. These sequences were subjected to an electronic Northern (see Example 2.1), by which the distribution in all tumor and normal tissues was studied (see FIG. 4a and FIG. 4b). The relevant candidates were then lengthened using all Incyte ESTs and all ESTs of public databases (see example 3). Then the sequences and their translation into possible proteins were compared to all nucleotide and protein databases, and studied for possible regions that code for proteins.
Algorithm for Identification and Lengthening of Partial cDNA Sequences with Altered Expression Pattern
[0061] An algorithm for finding overexpressed or underexpressed genes will be explained below. The individual steps are also summarized in a flowchart for the sake of clarity (see FIG. 4b).
[0062] 2.1. Electronic Northern Blot
[0063] By means of a standard program for homology search, e.g., BLAST (Altschul, S. F., Gish W., Miller, W., Myers, E. W. and Lipman, D. J. (1990) J. Mol. Biol. 215, 403-410), BLAST2 (Altschul S. F., Madden, T. L., Schaeffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Nucleic Acids Research 25 3389-3402) or FASTA (Pearson, W. R. and Lipman, D. J. (1988) Proc. Natl. Acad. Sci. USA 85 2444-2448) the homologous sequences in different EST libraries (private or public) arranged by tissues were determined for a partial DNA sequence S, e.g., an individual EST or a contig of ESTs. The (relative or absolute) tissue-specific occurrence frequencies of this partial sequence S which were determined in this way are called electronic Northern Blot.
[0064] 2.1.1
[0065] Analogously to the procedure described under 2.1, the EST of the sequence Seq. ID No. 36 was found which occurs 5× more heavily in prostate tumor tissue than in the corresponding normal tissue.
[0066] The possible function of this gene region relates to the glutamate-binding subunit of the NMDA receptor.
[0067] The result is as follows:
2|
|
NORMALTUMORRATIOS
% freq.% freq.N/TT/N
|
Bladder0.04650.02042.27310.4399
Breast0.03730.02831.31720.7592
Ovary0.00910.00781.16860.8557
Endocrine0.02920.01631.78610.5599
tissue
Gastrointestinal0.00390.02860.13577.3686
Brain0.01950.03500.55641.7973
Hematopoetic0.01120.0000undef0.0000
Skin0.02490.0000undef0.0000
Hepatic0.00000.0000undefundef
Heart0.00640.01370.46242.1624
Testicles0.00610.0000undef0.0000
Lungs0.03240.01422.28240.4381
Stomach-0.00970.03070.31503.1748
esophagus
Muscle-0.00690.0000undef0.0000
skeleton
Kidneys0.00590.02740.21714.6066
Pancreas0.00760.01660.45712.1876
Penis0.01500.08000.18725.3424
Prostate0.00710.03410.20974.7677
Uterus0.00660.0000undef0.0000
Breast-0.0036
hyperplasia
Small intestine0.0062
Prostatic0.0208
hyperplasia
Seminal vesicles0.0089
Sensory organs0.0000
White blood cells0.0131
|
FETUS
% freq.
|
Development0.0000
Gastrointenstinal0.0092
Brain0.0313
Hematopoetic0.0000
Heart blood vessels0.0000
Lungs0.0111
Kidneys0.0124
Prostate0.0249
Sensory organs0.0000
|
STANDARDIZED/
SUBTRACTED LIBRARIES
% freq.
|
Breast0.0748
Ovary uterus0.0388
Endocrine tissue0.0000
Fetal0.0012
Gastrointestinal0.0244
Hematopoetic0.0057
Skin muscle0.0032
Testicles0.0156
Lungs0.0000
Nerves0.0131
Prostate0.0256
Sensory organs0.0077
|
[0068] 2.1.3
[0069] Analogously to the procedure described under 2.1, the EST of the sequence Seq. ID No. 39 was found which occurs 4.5× more heavily in prostate tumor tissue than in the corresponding normal tissue.
[0070] The possible function of this gene region relates to protein control (protein trafficking) in the endoplasmatic reticulum (ER)
[0071] The result is as follows:
3|
|
NORMALTUMORRATIOS
% freq.% freq.N/TT/N
|
Bladder0.00460.00510.90921.0998
Breast0.00670.00223.05790.3270
Ovary0.00910.00263.50590.2852
Endocrine0.00360.00540.66981.4930
tissue
Gastrointestinal0.00580.00950.61071.6375
Brain0.00340.00331.03210.9689
Hematopoetic0.00560.0000undef0.0000
Skin0.00500.0000undef0.0000
Hepatic0.00990.0000undef0.0000
Heart0.00210.0000undef0.0000
Testicles0.00610.0000undef0.0000
Lungs0.00620.00471.31680.7594
Stomach0.01930.0000undef0.0000
esophagus
Muscle-0.00510.00600.85651.1675
skeleton
Kidneys0.00000.0000undefundef
Pancreas0.00380.00550.68571.4584
Penis0.00000.0000undefundef
Prostate0.00240.01060.22374.4697
Uterus0.00170.0000undef0.0000
Breast-0.0000
hyperplasia
Small0.0093
intestine
Prostatic0.0089
hyperplasia
Seminal-0.0000
vesicles
Sensory organs0.0000
White blood0.0026
cells
|
FETUS
% freq.
|
Development0.0000
Gastrointenstinal0.0062
Brain0.0000
Hematopoetic0.0079
Heart blodd vessels0.0000
Lungs0.0074
Kidneys0.0247
Prostate0.0000
Sensory organs0.0000
|
STANDARDIZED/
SUBTRACTED LIBRARIES
% freq.
|
Breast0.0000
Ovary uterus0.0091
Endocrine tissue0.0000
Fetal0.0017
Gastrointestinal0.0122
Hematopoetic0.0000
Skin muscle0.0162
Testicles0.0078
Lungs0.0082
Nerves0.0020
Prostate0.0128
Sensory organs0.0000
|
[0072] 2.1.4
[0073] Analogously to the procedure described under 2.1, the EST of the sequence Seq. ID No. 40 was found which occurs 8× more heavily in prostate tumor tissue than in the corresponding normal tissue.
[0074] The possible function of this gene region relates to the regulation of protein kinase.
[0075] The result is as follows:
4|
|
NORMALTUMORRATIOS
% freq.% freq.N/TT/N
|
Bladder0.00000.0000undefundef
Breast0.01200.07630.15736.3588
Ovary0.06080.02342.59690.3851
Endocrine0.00730.02450.29773.3593
tissue
Gastrointestinal0.08720.10000.87241.1462
Brain0.00170.0000undef0.0000
Hematopoetic0.00140.0000undef0.0000
Skin0.00000.0000undefundef
Hepatic0.01490.03880.38262.6139
Heart0.00110.0000undef0.0000
Testicles0.00000.0000undefundef
Lungs0.00500.03550.14057.1196
Stomach0.00000.02300.0000undef
esophagus
Muscle-0.00000.0000undefundef
skeleton
Kidneys0.00000.0000undefundef
Pancreas0.00000.01660.0000undef
Penis0.00000.0000undefundef
Prostate0.01190.09580.12438.0455
Uterus0.00170.02140.077412.9263
Breast-0.0073
hyperplasia
Small-0.0436
intestine
Prostatic0.0119
hyperplasia
Seminal-0.0089
vesicles
Sensory organs0.0470
White blood0.0009
cells
|
FETUS
% freq.
|
Development0.0000
Gastrointenstinal0.0247
Brain0.0000
Hematopoetic0.0000
Heart blood vessels0.0000
Lungs0.0000
Kidneys0.0000
Prostate0.0000
Sensory organs0.0000
|
STANDARDIZED/
SUBTRACTED LIBRARIES
% freq.
|
Breast0.0000
Ovary uterus0.0205
Endocrine tissue0.0000
Fetal0.0052
Gastrointestinal0.0366
Hematopoetic0.0000
Skin muscle0.0000
Testicles0.0000
Lungs0.0000
Nerves0.0000
Prostate0.0321
Sensory organs0.0000
|
[0076] The following northerns were also found in a similar procedure:
[0077]
5
|
|
Electronic Northern Blot for SEQ. ID. NO: 3
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0128
0.3637
2.7495
|
Breast
0.0293
0.0087
3.3637
0.2973
|
Ovary
0.0122
0.0416
0.2922
3.4228
|
Endocrine
0.0201
0.0245
0.8186
1.2216
|
tissue
|
Gastrointestinal
0.0252
0.0571
0.4411
2.2673
|
Brain
0.0161
0.0131
1.2257
0.8159
|
Hematopoetic
0.0084
0.1135
0.0739
13.5274
|
Skin
0.0099
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0388
0.0000
undef
|
Heart
0.0180
0.0000
undef
0.0000
|
Testicles
0.0122
0.0000
undef
0.0000
|
Lungs
0.0162
0.0189
0.8559
1.1683
|
Stomach-
0.0000
0.0153
0.0000
undef
|
esophogas
|
Muscle-
0.0069
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0149
0.0342
0.4342
2.3033
|
Pancreas
0.0265
0.0276
0.9599
1.0417
|
Penis
0.0180
0.0267
0.6739
1.4840
|
Prostate
0.0048
0.0149
0.3196
3.1288
|
Uterus
0.0066
0.0142
0.4642
2.1544
|
Breast-
0.0291
|
hyperplasia
|
Small-
0.0093
|
intestine
|
Prostate-
0.0089
|
hyperplasia
|
Seminal-
0.0178
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0148
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0307
|
Gastrointestinal
0.0062
|
Brain
0.0375
|
Hematopoetic
0.0079
|
Heart blood vessels
0.0164
|
Lungs
0.0037
|
Kidneys
0.0062
|
Prostate
0.0499
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0064
|
Gastrointestinal
0.0244
|
Hematopoetic
0.0114
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0328
|
Nerves
0.0120
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 4
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0153
0.3031
3.2995
|
Breast
0.0027
0.0044
0.6116
1.6351
|
Ovary
0.0030
0.0026
1.1686
0.8557
|
Endocrine-
0.0018
0.0082
0.2233
4.4791
|
tissue
|
Gastrointestinal
0.0000
0.0048
0.0000
undef
|
Brain
0.0000
0.0099
0.0000
undef
|
Hematopoetic
0.0070
0.0000
undef
0.0000
|
Skin
0.0050
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0042
0.0000
undef
0.0000
|
Testicles
0.0061
0.0000
undef
0.0000
|
Lungs
0.0037
0.0024
1.5801
0.6329
|
Stomach-
0.0097
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0034
0.0120
0.2855
3.5025
|
skeleton
|
Kidneys
0.0059
0.0068
0.8683
1.1517
|
Pancreas
0.0019
0.0055
0.3428
2.9168
|
Penis
0.0000
0.0267
0.0000
undef
|
Prostate
0.0048
0.0192
0.2486
4.0228
|
Uterus
0.0083
0.0000
undef
0.0000
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0267
|
vesicles
|
Sensory-organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood
0.0000
|
vessels
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0068
|
Endocrine tissue
0.0000
|
Fetal
0.0006
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0082
|
Nerves
0.0040
|
Prostate
0.0256
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 6
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0026
1.8185
0.5499
|
Breast
0.0027
0.0000
undef
0.0000
|
Ovary
0.0000
0.0078
0.0000
undef
|
Endocrine
0.0000
0.0027
0.0000
undef
|
tissue
|
Gastrointestinal
0.0039
0.0000
undef
0.0000
|
Brain
0.0025
0.0000
undef
0.0000
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0000
undef
0.0000
|
Stomach-
0.0193
0.0077
2.5198
0.3968
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0059
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0030
0.0000
undef
0.0000
|
Prostate
0.0024
0.0170
0.1398
7.1516
|
Uterus
0.0066
0.0000
undef
0.0000
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0000
|
Intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0124
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0023
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 7
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0153
0.0000
undef
|
Breast
0.0027
0.0109
0.2446
4.0878
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0036
0.0027
1.3396
0.7465
|
tissue
|
Gastrointestinal
0.0097
0.0000
undef
0.0000
|
Brain
0.0008
0.0011
0.7741
1.2918
|
Hematopoetic
0.0028
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0099
0.0129
0.7651
1.3069
|
Heart
0.0011
0.0000
undef
0.0000
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0019
0.0055
0.3428
2.9168
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0009
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0062
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0041
|
Lungs
0.0037
|
Kidneys
0.0124
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0023
|
Endocrine tissue
0.0000
|
Fetal
0.0029
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0228
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0010
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 10
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0093
0.0051
1.8185
0.5499
|
Breast
0.0027
0.0000
undef
0.0000
|
Ovary
0.0000
0.0026
0.0000
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0039
0.0000
undef
0.0000
|
Brain
0.0076
0.0066
1.1612
0.8612
|
Hematopoetic
0.0042
0.0000
undef
0.0000
|
Skin
0.0050
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0011
0.0275
0.0385
25.9489
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0047
0.0000
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0017
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0030
0.0000
undef
0.0000
|
Pancreas
0.0038
0.0055
0.6857
1.4584
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0048
0.0106
0.4475
2.2349
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0156
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0089
|
vesicles
|
Sensory organs
0.0118
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0031
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0160
|
Endocrine tissue
0.0000
|
Fetal
0.0058
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0114
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0060
|
Prostate
0.0000
|
Sensory organs
0.0155
|
|
Electronic Northern Blot for SEQ. ID. NO: 12
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0128
0.3637
2.7495
|
Breast
0.0080
0.0022
3.6695
0.2725
|
Ovary
0.0061
0.0026
2.3372
0.4279
|
Endocrine-
0.0036
0.0082
0.4465
2.2395
|
tissue
|
Gastrointestinal
0.0058
0.0048
1.2214
0.8187
|
Brain
0.0025
0.0077
0.3318
3.0142
|
Hematopoetic
0.0084
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0042
0.0137
0.3083
3.2436
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0050
0.0071
0.7023
1.4239
|
Stomach-
0.0097
0.0077
1.2599
0.7937
|
esophagus
|
Muscle-
0.0017
0.0300
0.0571
17.5127
|
skeleton
|
Kidneys
0.0059
0.0068
0.8683
1.1517
|
Pancreas
0.0057
0.0055
1.0285
0.9723
|
Penis
0.0000
0.0267
0.0000
undef
|
Prostate
0.0024
0.0170
0.1398
7.1516
|
Uterus
0.0066
0.0000
undef
0.0000
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0119
|
hyperplasia
|
Seminal-
0.0267
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0009
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0031
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood-
0.0041
|
vessels
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0068
|
Endocrine tissue
0.0245
|
Fetal
0.0035
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0114
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0164
|
Nerves
0.0070
|
Prostate
0.0256
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 13
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0077
0.0000
undef
|
Breast
0.0200
0.0240
0.8340
1.1991
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0146
0.0191
0.7655
1.3064
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0008
0.0000
undef
0.0000
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0089
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0124
|
Prostate
0.0000
|
Sensory organs
0.0419
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0175
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 15
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0128
0.3637
2.7495
|
Breast
0.0027
0.0087
0.3058
3.2702
|
Ovary
0.0000
0.0052
0.0000
undef
|
Endocrine-
0.0073
0.0245
0.2977
3.3593
|
tissue
|
Gastrointestinal
0.0019
0.0048
0.4071
2.4562
|
Brain
0.0127
0.0208
0.6111
1.6363
|
Hematopoetic
0.0098
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0129
0.0000
undef
|
Heart
0.0127
0.0000
undef
0.0000
|
Testicles
0.0061
0.0234
0.2612
3.8288
|
Lungs
0.0112
0.0047
2.3702
0.4219
|
Stomach-
0.0000
0.0077
0.0000
undef
|
esophagus
|
Muscle-
0.0051
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0238
0.0068
3.4733
0.2879
|
Pancreas
0.0095
0.0055
1.7142
0.5834
|
Penis
0.0030
0.0000
undef
0.0000
|
Prostate
0.0071
0.0277
0.2581
3.8738
|
Uterus
0.0017
0.0071
0.2321
4.3088
|
Breast-
0.0145
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0178
|
hyperplasia
|
Seminal-
0.0356
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0063
|
Hematopoetic
0.0079
|
Heart blood vessels
0.0041
|
Lungs
0.0111
|
Kidneys
0.0185
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Ovary uterus
0.0205
|
Endocrine tissue
0.0490
|
Fetal
0.0017
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0130
|
Testicles
0.0156
|
Lungs
0.0000
|
Nerves
0.0020
|
Prostate
0.0128
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 17
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0011
0.0000
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0030
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0079
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0023
|
Endocrine tissue
0.0000
|
Fetal
0.0006
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0057
|
Skin muscle
0.0032
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0040
|
Prostate
0.0000
|
Sensory organs
0.0077
|
|
Electronic Northern Blot for SEQ. ID. NO: 18
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0183
0.0000
undef
0.0000
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0085
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0156
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 19
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0022
0.0000
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0008
0.0000
undef
0.0000
|
Hematopoetic
0.0028
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 20
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0102
0.4546
2.1996
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0091
0.0000
undef
0.0000
|
Endocrine-
0.0036
0.0054
0.6698
1.4930
|
tissue
|
Gastrointestinal
0.0000
0.0048
0.0000
undef
|
Brain
0.0017
0.0044
0.3871
2.5836
|
Hematopoetic
0.0070
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0065
0.0000
undef
|
Heart
0.0011
0.0000
undef
0.0000
|
Testicles
0.0061
0.0000
undef
0.0000
|
Lungs
0.0050
0.0024
2.1069
0.4746
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0089
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0043
0.0000
undef
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0073
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0035
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0062
|
Brain
0.0125
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0000
|
Lungs
0.0037
|
Kidneys
0.0124
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0204
|
Ovary uterus
0.0068
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0040
|
Prostate
0.0192
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 21
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0043
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0009
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 22
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0011
0.0000
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0009
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0017
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0057
|
Skin muscle
0.0032
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 23
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0149
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0059
|
hyperplasia
|
Seminal
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 24
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0040
0.0000
undef
0.0000
|
Ovary
0.0030
0.0052
0.5843
1.7114
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0019
0.0000
undef
0.0000
|
Brain
0.0000
0.0011
0.0000
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0065
0.0000
undef
|
Heart
0.0011
0.0000
undef
0.0000
|
Testicles
0.0122
0.0000
undef
0.0000
|
Lungs
0.0025
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0077
0.0000
undef
|
esophagus
|
Muscle-
0.0017
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0149
0.0000
undef
0.0000
|
Pancreas
0.0019
0.0000
undef
0.0000
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0048
0.0106
0.4475
2.2349
|
Uterus
0.0017
0.0071
0.2321
4.3088
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0154
|
Gastrointestinal
0.0031
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0000
|
Lungs
0.0037
|
Kidneys
0.0062
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Ovary uterus
0.0046
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0057
|
Skin muscle
0.0032
|
Testicles
0.0078
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0128
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 26
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 27
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0026
0.0000
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0037
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0068
0.0000
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0059
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0192
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 29
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0027
0.0000
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0106
0.0000
undef
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 31
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0000
undef
0.0000
|
Breast
0.0027
0.0044
0.6116
1.6351
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0018
0.0027
0.6698
1.4930
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0042
0.0088
0.4838
2.0669
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0050
0.0000
undef
0.0000
|
Heart
0.0021
0.0137
0.1541
6.4872
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0120
0.0000
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0166
0.0000
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0000
0.0128
0.0000
undef
|
Uterus
0.0017
0.0071
0.2321
4.3088
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0059
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0154
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0157
|
Heart blood vessels
0.0041
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0249
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Ovary uterus
0.0091
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0060
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 33
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0026
0.0000
undef
|
Breast
0.0013
0.0000
undef
0.0000
|
Ovary
0.0030
0.0078
0.3895
2.5671
|
Endocrine-
0.0000
0.0027
0.0000
undef
|
tissue
|
Gastrointestinal
0.0019
0.0000
undef
0.0000
|
Brain
0.0017
0.0000
undef
0.0000
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0011
0.0000
undef
0.0000
|
Testicles
0.0000
0.0234
0.0000
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0017
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0000
0.0068
0.0000
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0030
0.0000
undef
0.0000
|
Prostate
0.0000
0.0064
0.0000
undef
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate
0.0000
|
hyperplasia
|
Seminal
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0009
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0017
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0057
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0050
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 34
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0077
0.0000
undef
|
Breast
0.0067
0.0065
1.0193
0.9811
|
Ovary
0.0122
0.0052
2.3372
0.4279
|
Endocrine-
0.0073
0.0000
undef
0.0000
|
tissue
|
Gastrointestinal
0.0019
0.0048
0.4071
2.4562
|
Brain
0.0102
0.0033
3.0964
0.3230
|
Hematopoetic
0.0028
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0050
0.0065
0.7651
1.3069
|
Heart
0.0011
0.0000
undef
0.0000
|
Testicles
0.0061
0.0000
undef
0.0000
|
Lungs
0.0025
0.0000
undef
0.0000
|
Stomach-
0.0097
0.0153
0.6300
1.5874
|
esophagus
|
Muscle-
0.0086
0.0060
1.4275
0.7005
|
skeleton
|
Kidneys
0.0030
0.0137
0.2171
4.6066
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0030
0.0000
undef
0.0000
|
Prostate
0.0000
0.0128
0.0000
undef
|
Uterus
0.0033
0.0142
0.2321
4.3088
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0059
|
hyperplasia
|
Seminal-
0.0000
|
Sensory organs
0.0235
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0062
|
Brain
0.0563
|
Hematopoetic
0.0118
|
Heart blood vessels
0.0082
|
Lungs
0.0111
|
Kidneys
0.0124
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0544
|
Ovary uterus
0.0091
|
Endocrine tissue
0.0979
|
Fetal
0.0058
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0097
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0161
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 37
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0027
0.0000
undef
0.0000
|
Ovary
0.0030
0.0000
undef
0.0000
|
Endocrine
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0025
0.0011
2.3223
0.4306
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0117
0.0000
undef
|
Lungs
0.0087
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0024
0.0128
0.1864
5.3637
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0154
|
Gastrointestinal
0.0031
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0037
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0140
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0076
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0097
|
Testicles
0.0000
|
Lungs
0.0082
|
Nerves
0.0030
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 44
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0128
0.0000
undef
|
Breast
0.0013
0.0044
0.3058
3.2702
|
Ovary
0.0030
0.0052
0.5843
1.7114
|
Endocrine
0.0018
0.0054
0.3349
2.9861
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0033
0.0000
undef
|
Hematopoetic
0.0000
0.0378
0.0000
undef
|
Skin
0.0050
0.1693
0.0294
34.0525
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0064
0.0000
undef
0.0000
|
Testicles
0.0061
0.0117
0.5224
1.9144
|
Lungs
0.0025
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0086
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0089
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0030
0.0000
undef
0.0000
|
Prostate
0.0024
0.0128
0.1864
5.3637
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0052
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0041
|
Lungs
0.0037
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0041
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0114
|
Skin muscle
0.0065
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0030
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 45
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0179
0.0000
undef
|
Breast
0.0013
0.0044
0.3058
3.2702
|
Ovary
0.0030
0.0026
1.1686
0.8557
|
Endocrine
0.0018
0.0000
undef
0.0000
|
tissue
|
Gastrointestinal
0.0097
0.0000
undef
0.0000
|
Brain
0.0000
0.0022
0.0000
undef
|
Hematopoetic
0.0014
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0077
0.0000
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0068
0.0000
undef
|
Pancreas
0.0000
0.0055
0.0000
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0024
0.0447
0.0533
18.7729
|
Uterus
0.0000
0.0071
0.0000
undef
|
Breast-
0.0109
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0089
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0037
|
Kidneys
0.0062
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0082
|
Nerves
0.0010
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 46
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0051
0.0000
undef
|
Breast
0.0053
0.0153
0.3495
2.8614
|
Ovary
0.0091
0.0182
0.5008
1.9967
|
Endocrine-
0.0055
0.0191
0.2870
3.4837
|
tissue
|
Gastrointestinal
0.0252
0.0238
1.0585
0.9447
|
Brain
0.0068
0.0153
0.4423
2.2607
|
Hematopoetic
0.0042
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0099
0.0065
1.5303
0.6535
|
Heart
0.0000
0.0412
0.0000
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0025
0.0095
0.2634
3.7971
|
Stomach-
0.0290
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0103
0.0060
1.7130
0.5838
|
skeleton
|
Kidneys
0.0059
0.0068
0.8683
1.1517
|
Pancreas
0.0038
0.0221
0.1714
5.8337
|
Penis
0.0060
0.0000
undef
0.0000
|
Prostate
0.0262
0.0532
0.4922
2.0317
|
Uterus
0.0033
0.0142
0.2321
4.3088
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0125
|
intestine
|
Prostate-
0.0119
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0009
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0154
|
Gastrointestinal
0.0031
|
Brain
0.0125
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0041
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Ovary uterus
0.0137
|
Endocrine tissue
0.0000
|
Fetal
0.0070
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0097
|
Testicles
0.0000
|
Lungs
0.0082
|
Nerves
0.0110
|
Prostate
0.0321
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 47
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0051
0.9092
1.0998
|
Breast
0.0080
0.0087
0.9174
1.0901
|
Ovary
0.0061
0.0000
undef
0.0000
|
Endocrine-
0.0073
0.0054
1.3396
0.7465
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0051
0.0088
0.5806
1.7224
|
Hematopoetic
0.0070
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0021
0.0000
undef
0.0000
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0062
0.0024
2.6336
0.3797
|
Stomach-
0.0000
0.0077
0.0000
undef
|
esophagus
|
Muscle-
0.0086
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0059
0.0068
0.8683
1.1517
|
Pancreas
0.0057
0.0000
undef
0.0000
|
Penis
0.0090
0.0000
undef
0.0000
|
Prostate
0.0048
0.0128
0.3729
2.6818
|
Uterus
0.0083
0.0071
1.1604
0.8618
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0125
|
intestine
|
Prostate-
0.0059
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0061
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0031
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0041
|
Lungs
0.0037
|
Kidneys
0.0185
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0068
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0328
|
Nerves
0.0080
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 48
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0153
0.0000
undef
|
Breast
0.0040
0.0044
0.9174
1.0901
|
Ovary
0.0000
0.0104
0.0000
undef
|
Endocrine-
0.0018
0.0000
undef
0.0000
|
tissue
|
Gastrointestinal
0.0019
0.0095
0.2036
4.9124
|
Brain
0.0000
0.0055
0.0000
undef
|
Hematopoetic
0.0098
0.0000
undef
0.0000
|
Skin
0.0050
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0194
0.0000
undef
|
Heart
0.0021
0.0000
undef
0.0000
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0012
0.0047
0.2634
3.7971
|
Stomach-
0.0097
0.0077
1.2599
0.7937
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0059
0.0068
0.8683
1.1517
|
Pancreas
0.0057
0.0000
undef
0.0000
|
Penis
0.0000
0.0267
0.0000
undef
|
Prostate
0.0048
0.0298
0.1598
6.2576
|
Uterus
0.0033
0.0071
0.4642
2.1544
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0031
|
intestine
|
Prostate-
0.0238
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0026
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0154
|
Gastrointestinal
0.0154
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0041
|
Lungs
0.0111
|
Kidneys
0.0000
|
Prostate
0.0499
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0160
|
Endocrine tissue
0.0000
|
Fetal
0.0041
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0030
|
Prostate
0.0128
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 49
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0026
0.0000
undef
|
Breast
0.0067
0.0065
1.0193
0.9811
|
Ovary
0.0061
0.0052
1.1686
0.8557
|
Endocrine-
0.0055
0.0027
2.0093
0.4977
|
tissue
|
Gastrointestinal
0.0019
0.0048
0.4071
2.4562
|
Brain
0.0008
0.0044
0.1935
5.1673
|
Hematopoetic
0.0042
0.0000
undef
0.0000
|
Skin
0.0050
0.0000
undef
0.0000
|
Hepatic
0.0099
0.0000
undef
0.0000
|
Heart
0.0064
0.0275
0.2312
4.3248
|
Testicles
0.0061
0.0117
0.5224
1.9144
|
Lungs
0.0087
0.0071
1.2290
0.8137
|
Stomach-
0.0097
0.0077
1.2599
0.7937
|
esophagus
|
Muscle-
0.0086
0.0060
1.4275
0.7005
|
skeleton
|
Kidneys
0.0059
0.0068
0.8683
1.1517
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0533
0.0000
undef
|
Prostate
0.0024
0.0170
0.1398
7.1516
|
Uterus
0.0066
0.0142
0.4642
2.1544
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0062
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0118
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0092
|
Brain
0.0000
|
Hematopoetic
0.0118
|
Heart blood vessels
0.0204
|
Lungs
0.0185
|
Kidneys
0.0247
|
Prostate
0.0249
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Ovary uterus
0.0023
|
Endocrine tissue
0.0000
|
Fetal
0.0111
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0057
|
Skin muscle
0.0194
|
Testicles
0.0000
|
Lungs
0.0328
|
Nerves
0.0020
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 50
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0000
undef
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0000
0.0000
undef
undef
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0024
0.0255
0.0932
10.7274
|
Uterus
0.0000
0.0000
undef
undef
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 51
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0000
0.0077
0.0000
undef
|
Breast
0.0000
0.0022
0.0000
undef
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0000
0.0000
undef
undef
|
Brain
0.0008
0.0033
0.2580
3.8754
|
Hematopoetic
0.0000
0.0000
undef
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0065
0.0000
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0061
0.0000
undef
0.0000
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0097
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Penis
0.0000
0.0267
0.0000
undef
|
Prostate
0.0048
0.0192
0.2486
4.0228
|
Uterus
0.0017
0.0142
0.1160
8.6176
|
Breast-
0.0000
|
hyperplasia
|
Small-
0.0000
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0000
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0031
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0082
|
Nerves
0.0000
|
Prostate
0.0128
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 52
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0046
0.0077
0.6062
1.6497
|
Breast
0.0027
0.0022
1.2232
0.8176
|
Ovary
0.0030
0.0026
1.1686
0.8557
|
Endocrine
0.0000
0.0000
undef
undef
|
tissue
|
Gastrointestinal
0.0039
0.0000
undef
0.0000
|
Brain
0.0076
0.0022
3.4835
0.2871
|
Hematopoetic
0.0042
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0065
0.0000
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0071
0.0000
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0034
0.0060
0.5710
1.7513
|
skeleton
|
Kidneys
0.0030
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0055
0.0000
undef
|
Penis
0.0000
0.0000
undef
undef
|
Prostate
0.0048
0.0149
0.3196
3.1288
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0062
|
intestine
|
Prostate-
0.0059
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0062
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Heart blood vessels
0.0041
|
Lungs
0.0037
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Ovary uterus
0.0023
|
Endocrine tissue
0.0000
|
Fetal
0.0017
|
Gastrointestinal
0.0244
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0000
|
Nerves
0.0070
|
Prostate
0.0064
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 53
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0093
0.0128
0.7274
1.3748
|
Breast
0.0053
0.0022
2.4463
0.4088
|
Ovary
0.0030
0.0026
1.1686
0.8557
|
Endocrine-
0.0109
0.0082
1.3396
0.7465
|
tissue
|
Gastrointestinal
0.0039
0.0048
0.8143
1.2281
|
Brain
0.0042
0.0153
0.2765
3.6171
|
Hematopoetic
0.0042
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0050
0.0000
undef
0.0000
|
Heart
0.0064
0.0000
undef
0.0000
|
Testicles
0.0061
0.0117
0.5224
1.9144
|
Lungs
0.0075
0.0024
3.1603
0.3164
|
Stomach-
0.0193
0.0153
1.2599
0.7937
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0137
0.0000
undef
|
Pancreas
0.0057
0.0110
0.5143
1.9446
|
Penis
0.0030
0.0000
undef
0.0000
|
Prostate
0.0048
0.0106
0.4475
2.2349
|
Uterus
0.0017
0.0000
undef
0.0000
|
Breast-
0.0145
|
hyperplasia
|
Small-
0.0062
|
intestine
|
Prostate-
0.0000
|
hyperplasia
|
Seminal-
0.0089
|
Sensory organs
0.0000
|
White blood
0.0044
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0123
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0123
|
Lungs
0.0037
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Ovary uterus
0.0160
|
Endocrine tissue
0.0000
|
Fetal
0.0140
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0057
|
Skin muscle
0.0130
|
Testicles
0.0156
|
Lungs
0.0082
|
Nerves
0.0090
|
Prostate
0.0128
|
Sensory organs
0.0000
|
|
Electronic Northern Blot for SEQ. ID. NO: 142
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
Bladder
0.0093
0.0026
3.6370
0.2750
|
Breast
0.0067
0.0131
0.5096
1.9621
|
Ovary
0.0122
0.0130
0.9349
1.0696
|
Endocrine-
0.0036
0.0027
1.3396
0.7465
|
tissue
|
Gastrointestinal
0.0058
0.0048
1.2214
0.8187
|
Brain
0.0161
0.0044
3.6770
0.2720
|
Hematopoetic
0.0056
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0099
0.0065
1.5303
0.6535
|
Heart
0.0117
0.0000
undef
0.0000
|
Testicles
0.0000
0.0117
0.0000
undef
|
Lungs
0.0075
0.0189
0.3950
2.5314
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0069
0.0060
1.1420
0.8756
|
skeleton
|
Kidneys
0.0000
0.0068
0.0000
undef
|
Pancreas
0.0057
0.0000
undef
0.0000
|
Penis
0.0000
0.0267
0.0000
undef
|
Prostate
0.0024
0.0085
0.2797
3.5758
|
Uterus
0.0033
0.0142
0.2321
4.3088
|
Breast-
0.0036
|
hyperplasia
|
Small-
0.0125
|
intestine
|
Prostate-
0.0030
|
hyperplasia
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
White blood
0.0017
|
cells
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0092
|
Brain
0.0125
|
Hematopoetic
0.0000
|
Heart blood vessels
0.0041
|
Lungs
0.0148
|
Kidneys
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0140
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Ovary uterus
0.0023
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0114
|
Skin muscle
0.0000
|
Testicles
0.0000
|
Lungs
0.0410
|
Nerves
0.0090
|
Prostate
0.0192
|
Sensory organs
0.0000
|
|
Electronic Northern for SEQ. ID: 144
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphoma
0.0025
0.0000
undef
0.0000
|
Bladder
0.0039
0.0141
0.2766
3.6156
|
Breast
0.0062
0.0056
1.0959
0.9125
|
Large-
0.0057
0.0028
2.0184
0.4955
|
intestine
|
Small-
0.0000
0.0107
0.0000
undef
|
intestine
|
Ovary
0.0059
0.0024
2.4887
0.4018
|
Endocrine-
0.0016
0.0142
0.1132
8.8363
|
tissue
|
Brain
0.0023
0.0140
0.1658
6.0318
|
Skin
0.0037
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0063
0.0000
undef
|
Heart
0.0061
0.0137
0.4430
2.2572
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0029
0.0074
0.3947
2.5338
|
Stomach-
0.0145
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0017
0.0185
0.0928
10.7785
|
skeleton
|
Kidneys
0.0067
0.0048
1.3927
0.7180
|
Pancreas
0.0083
0.0055
1.4958
0.6685
|
Prostate
0.0066
0.0143
0.4604
2.1719
|
T lymphoma
0.0000
0.0000
undef
undef
|
Uterus
0.0103
0.0138
0.7497
1.3339
|
White blood
0.0007
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0000
|
Seminal-
0.0211
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0056
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0071
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0303
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0354
|
Endocrine tissue
0.0245
|
Fetal
0.0029
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0125
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0131
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0225
|
Prostate_n
0.0182
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 145
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0025
0.0000
undef
0.0000
|
Bladder
0.0390
0.1151
0.3387
2.9527
|
Breast
0.0132
0.0014
9.3932
0.1065
|
Large
0.0498
0.0114
4.3731
0.2287
|
intestine
|
Small
0.0165
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0000
0.0072
0.0000
undef
|
Endocrine
0.0016
0.0124
0.1293
7.7318
|
tissue
|
Brain
0.0278
0.0150
1.8568
0.5386
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0127
0.0000
undef
|
Heart
0.0000
0.0550
0.0000
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0156
0.0000
undef
0.0000
|
Stomach-
0.0145
0.0064
2.2671
0.4411
|
esophagus
|
Muscle-
0.0017
0.0074
0.2319
4.3114
|
skeleton
|
Kidneys
0.0067
0.0048
1.3927
0.7180
|
Pancreas
0.0248
0.0552
0.4487
2.2285
|
Prostate
0.0349
0.0638
0.5463
1.8304
|
T lymphoma
0.0076
0.0000
undef
0.0000
|
Uterus
0.0089
0.0000
undef
0.0000
|
White blood
0.0157
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0080
|
Penis
0.0027
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0056
|
Brain
0.0000
|
Hematopoetic
0.0079
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0124
|
Placenta
0.0182
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0203
|
Endocrine tissue
0.0000
|
Fetal
0.0017
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0257
|
Skin muscle
0.0000
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0010
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0090
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 146
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0075
0.0000
undef
0.0000
|
Bladder
0.0078
0.0094
0.8297
1.2052
|
Breast
0.0044
0.0042
1.0437
0.9581
|
Large-
0.0038
0.0000
undef
0.0000
|
intestine
|
Small-
0.0165
0.0213
0.7730
1.2937
|
intestine
|
Ovary
0.0030
0.0048
0.6222
1.6073
|
Endocrine-
0.0000
0.0018
0.0000
undef
|
tissue
|
Brain
0.0081
0.0070
1.1605
0.8617
|
Skin
0.0037
0.0000
undef
0.0000
|
Hepatic
0.0093
0.0063
1.4649
0.6826
|
Heart
0.0030
0.0275
0.1108
9.0287
|
Testicles
0.0040
0.0059
0.6786
1.4737
|
Lungs
0.0000
0.0037
0.0000
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0017
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0090
0.0000
undef
0.0000
|
Pancreas
0.0050
0.0055
0.8975
1.1142
|
Prostate
0.0047
0.0091
0.5168
1.9350
|
T lymphoma
0.0051
0.0075
0.6762
1.4788
|
Uterus
0.0015
0.0046
0.3213
3.1125
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0053
|
Penis
0.0054
|
Seminal-
0.0070
|
vesicles
|
Sensory organs
0.0118
|
|
FETUS
|
% freq.
|
|
Development
0.0139
|
Gastrointestinal
0.0028
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0061
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0253
|
Endocrine tissue
0.0000
|
Fetal
0.0064
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0257
|
Skin muscle
0.0000
|
Testicles_n
0.0084
|
Testicles_t
0.0000
|
Lungs_n
0.0195
|
Lungs_t
0.0000
|
Nerves
0.0070
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0158
|
Prostate_n
0.0000
|
Sensory organs
0.0155
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 147
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0025
0.0000
undef
0.0000
|
Bladder
0.0039
0.0141
0.2766
3.6156
|
Breast
0.0062
0.0028
2.1917
0.4563
|
Large-
0.0057
0.0028
2.0184
0.4955
|
intestine
|
Small-
0.0000
0.0107
0.0000
undef
|
intestine
|
Ovary
0.0059
0.0024
2.4887
0.4018
|
Endocrine-
0.0016
0.0106
0.1509
6.6272
|
tissue
|
Brain
0.0046
0.0080
0.5803
1.7234
|
Skin
0.0037
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0041
0.0137
0.2954
3.3858
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0039
0.0055
0.7016
1.4253
|
Stomach-
0.0145
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0017
0.0185
0.0928
10.7785
|
skeleton
|
Kidneys
0.0045
0.0048
0.9285
1.0770
|
Pancreas
0.0066
0.0055
1.1966
0.8357
|
Prostate
0.0057
0.0130
0.4341
2.3036
|
T lymphoma
0.0000
0.0000
undef
undef
|
Uterus
0.0074
0.0046
1.6064
0.6225
|
White blood
0.0014
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0000
|
Seminal-
0.0211
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0056
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0071
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0121
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0304
|
Endocrine tissue
0.0245
|
Fetal
0.0046
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0209
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0141
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0203
|
Prostate_n
0.0182
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 148
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0125
0.0000
undef
0.0000
|
Bladder
0.0039
0.0141
0.2766
3.6156
|
Breast
0.0079
0.0141
0.5636
1.7743
|
Large-
0.0038
0.0057
0.6728
1.4864
|
intestine
|
Small-
0.0027
0.0107
0.2577
3.8812
|
intestine
|
Ovary
0.0000
0.0095
0.0000
undef
|
Endocrine-
0.0161
0.0231
0.6964
1.4359
|
tissue
|
Brain
0.0156
0.0229
0.6812
1.4681
|
Skin
0.0110
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0190
0.0000
undef
|
Heart
0.0132
0.0000
undef
0.0000
|
Testicles
0.0080
0.0118
0.6786
1.4737
|
Lungs
0.0097
0.0055
1.7540
0.5701
|
Stomach-
0.0000
0.0064
0.0000
undef
|
esophagus
|
Muscle-
0.0086
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0246
0.0048
5.1067
0.1958
|
Pancreas
0.0116
0.0055
2.0941
0.4775
|
Prostate
0.0104
0.0221
0.4682
2.1360
|
T lymphoma
0.0152
0.0000
undef
0.0000
|
Uterus
0.0089
0.0092
0.9638
1.0375
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0107
|
Penis
0.0054
|
Seminal-
0.0493
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0125
|
Hematopoetic
0.0079
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0036
|
Lungs
0.0108
|
Adrenal gland
0.0000
|
Kidneys
0.0309
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0557
|
Endocrine tissue
0.0735
|
Fetal
0.0023
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0130
|
Testicles_n
0.0125
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0020
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0248
|
Prostate_n
0.0121
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 149
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0000
0.0000
undef
undef
|
Bladder
0.0000
0.0000
undef
undef
|
Breast
0.0000
0.0042
0.0000
undef
|
Large-
0.0000
0.0028
0.0000
undef
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0032
0.0000
undef
0.0000
|
tissue
|
Brain
0.0000
0.0010
0.0000
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0010
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0045
0.0000
undef
0.0000
|
Pancreas
0.0000
0.0000
undef
undef
|
Prostate
0.0019
0.0039
0.4823
2.0732
|
T lymphoma
0.0051
0.0000
undef
0.0000
|
Uterus
0.0000
0.0000
undef
undef
|
White blood
0.0014
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0000
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0079
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0244
|
Hematopoetic
0.0000
|
Skin muscle
0.0032
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0050
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0045
|
Prostate_n
0.0000
|
Sensory organs
0.0077
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 150
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0100
0.0000
undef
0.0000
|
Bladder
0.0117
0.0094
1.2446
0.8035
|
Breast
0.0035
0.0014
2.5048
0.3992
|
Large-
0.0038
0.0028
1.3456
0.7432
|
intestine
|
Small-
0.0055
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0059
0.0048
1.2443
0.8036
|
Endocrine-
0.0032
0.0053
0.6036
1.6568
|
tissue
|
Brain
0.0029
0.0070
0.4145
2.4127
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0190
0.0000
undef
|
Heart
0.0051
0.0000
undef
0.0000
|
Testicles
0.0040
0.0000
undef
0.0000
|
Lungs
0.0039
0.0055
0.7016
1.4253
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0017
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0067
0.0000
undef
0.0000
|
Pancreas
0.0017
0.0000
undef
0.0000
|
Prostate
0.0038
0.0052
0.7235
1.3821
|
T lymphoma
0.0101
0.0149
0.6762
1.4788
|
Uterus
0.0015
0.0046
0.3213
3.1125
|
White blood
0.0048
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0094
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0028
|
Brain
0.0125
|
Hematopoetic
0.0079
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood
0.0000
|
vessels
|
Lungs
0.0072
|
Adrenal gland
0.0000
|
Kidneys
0.0185
|
Placenta
0.0061
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0204
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0152
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0257
|
Skin muscle
0.0000
|
Testicles_n
0.0042
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0100
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0090
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 151
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0000
0.0000
undef
undef
|
Bladder
0.0000
0.0023
0.0000
undef
|
Breast
0.0000
0.0000
undef
undef
|
Large-
0.0000
0.0000
undef
undef
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0071
0.0000
undef
|
tissue
|
Brain
0.0000
0.0010
0.0000
undef
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Prostate
0.0009
0.0039
0.2412
4.1464
|
T lymphoma
0.0000
0.0075
0.0000
undef
|
Uterus
0.0015
0.0000
undef
0.0000
|
White blood
0.0007
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0000
|
Penis
0.0000
|
Seminal-vesicles
0.0000
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0035
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0032
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0010
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0000
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 152
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0000
0.0000
undef
undef
|
Bladder
0.0000
0.0047
0.0000
undef
|
Breast
0.0009
0.0014
0.6262
1.5969
|
Large-
0.0038
0.0000
undef
0.0000
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0000
0.0024
0.0000
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Brain
0.0006
0.0010
0.5803
1.7234
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0049
0.0000
undef
0.0000
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0017
0.0000
undef
0.0000
|
Prostate
0.0075
0.0039
1.9294
0.5183
|
T lymphoma
0.0000
0.0075
0.0000
undef
|
Uterus
0.0015
0.0000
undef
0.0000
|
White blood
0.0000
0.0000
undef
undef
|
cells
|
Hematopoetic
0.0000
|
Penis
0.0027
|
Seminal-
0.0070
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0028
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0062
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0010
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0000
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 153
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0075
0.0000
undef
0.0000
|
Bladder
0.0078
0.0000
undef
0.0000
|
Breast
0.0026
0.0028
0.9393
1.0646
|
Large-
0.0000
0.0000
undef
undef
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0016
0.0000
undef
0.0000
|
tissue
|
Brain
0.0041
0.0110
0.3693
2.7082
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0046
0.0000
undef
0.0000
|
Heart
0.0020
0.0137
0.1477
6.7715
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0010
0.0018
0.5262
1.9004
|
Stomach
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0000
0.0074
0.0000
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0166
0.0000
undef
|
Prostate
0.0028
0.0078
0.3618
2.7643
|
T lymphoma
0.0025
0.0000
undef
0.0000
|
Uterus
0.0015
0.0046
0.3213
3.1125
|
White blood
0.0000
0.0000
undef
undef
|
cells
|
Hematopoetic
0.0000
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0139
|
Gastrointestinal
0.0000
|
Brain
0.0063
|
Hematopoetic
0.0157
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0036
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0249
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0068
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0152
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0060
|
Kidneys_t
0.0000
|
Ovary Uterus
0.0113
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 154
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0075
0.0000
undef
0.0000
|
Bladder
0.0000
0.0023
0.0000
undef
|
Breast
0.0018
0.0014
1.2524
0.7985
|
Large-
0.0019
0.0000
undef
0.0000
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0030
0.0072
0.4148
2.4110
|
Endocrine-
0.0000
0.0095
0.0000
undef
|
tissue
|
Brain
0.0018
0.0000
undef
0.0000
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0010
0.0000
undef
0.0000
|
Testicles
0.0000
0.0118
0.0000
undef
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0034
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0000
0.0048
0.0000
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Prostate
0.0009
0.0039
0.2412
4.1465
|
T lymphoma
0.0025
0.0000
undef
0.0000
|
Uterus
0.0015
0.0000
undef
0.0000
|
White blood
0.0014
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0053
|
Penis
0.0027
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0000
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0017
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0042
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0060
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0000
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 155
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0100
0.0000
undef
0.0000
|
Bladder
0.0000
0.0117
0.0000
undef
|
Breast
0.0088
0.0098
0.8946
1.1179
|
Large-
0.0019
0.0028
0.6728
1.4864
|
intestine
|
Small-
0.0027
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0119
0.0048
2.4886
0.4018
|
Endocrine-
0.0064
0.0019
3.3917
0.2948
|
tissue
|
Brain
0.0205
0.0060
3.4255
0.2919
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0046
0.0063
0.7324
1.3653
|
Heart
0.0030
0.0000
undef
0.0000
|
Testicles
0.0040
0.0000
undef
0.0000
|
Lungs
0.0049
0.0037
1.3155
0.7602
|
Stomach-
0.0072
0.0192
0.3778
2.6472
|
esophagus
|
Muscle-
0.0103
0.0037
2.7833
0.3593
|
skeleton
|
Kidneys
0.0022
0.0096
0.2321
4.3085
|
Pancreas
0.0000
0.0000
undef
undef
|
Prostate
0.0066
0.0130
0.5065
1.9745
|
T lymphoma
0.0000
0.0075
0.0000
undef
|
Uterus
0.0046
0.0138
0.3368
2.9694
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0080
|
Seminal-
0.0070
|
vesicles
|
Sensory organs
0.0235
|
|
FETUS
|
% freq.
|
|
Development
0.0139
|
Gastrointestinal
0.0083
|
Brain
0.0626
|
Hematopoetic
0.0118
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0107
|
Lungs
0.0108
|
Adrenal gland
0.0254
|
Kidneys
0.0124
|
Placenta
0.0061
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0544
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0051
|
Endocrine tissue
0.0979
|
Fetal
0.0058
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0194
|
Testicles_n
0.0167
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0201
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0090
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 156
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0025
0.0000
undef
0.0000
|
Bladder
0.0039
0.0141
0.2766
3.6156
|
Breast
0.0044
0.0098
0.4473
2.2357
|
Large-
0.0019
0.0057
0.3364
2.9727
|
intestine
|
Small-
0.0110
0.0107
1.0306
0.9703
|
intestine
|
Ovary
0.0030
0.0119
0.2489
4.0182
|
Endocrine-
0.0032
0.0089
0.3621
2.7613
|
tissue
|
Brain
0.0017
0.0040
0.4352
2.2978
|
Skin
0.0037
0.0789
0.0466
21.4787
|
Hepatic
0.0000
0.0063
0.0000
undef
|
Heart
0.0152
0.0000
undef
0.0000
|
Testicles
0.0120
0.0237
0.5089
1.9650
|
Lungs
0.0039
0.0037
1.0524
0.9502
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0086
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0090
0.0000
undef
0.0000
|
Pancreas
0.0017
0.0055
0.2992
3.3427
|
Prostate
0.0038
0.0117
0.3216
3.1098
|
T lymphoma
0.0101
0.0224
0.4508
2.2182
|
Uterus
0.0030
0.0092
0.3213
3.1125
|
White blood
0.0123
0.0607
0.2029
4.9287
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0054
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0028
|
Brain
0.0000
|
Hematopoetic
0.0079
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0142
|
Lungs
0.0072
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0061
|
Prostate
0.0000
|
Sensory organs
0.0126
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0070
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0000
|
Skin muscle
0.0065
|
Testicles_n
0.0042
|
Testicles_t
0.0000
|
Lungs_n
0.0098
|
Lungs_t
0.0000
|
Nerves
0.0060
|
Kidneys_t
0.0000
|
Ovary Uterus
0.0023
|
Prostate_n
0.0121
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 157
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0025
0.0000
undef
0.0000
|
Bladder
0.0000
0.0235
0.0000
undef
|
Breast
0.0035
0.0070
0.5010
1.9961
|
Large-
0.0134
0.0000
undef
0.0000
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0030
0.0048
0.6222
1.6073
|
Endocrine-
0.0032
0.0000
undef
0.0000
|
tissue
|
Brain
0.0006
0.0040
0.1451
6.8935
|
Skin
0.0037
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0000
undef
undef
|
Heart
0.0010
0.0275
0.0369
27.0862
|
Testicles
0.0000
0.0000
undef
undef
|
Lungs
0.0010
0.0000
undef
0.0000
|
Stomach-
0.0072
0.0064
1.1335
0.8822
|
esophagus
|
Muscle-
0.0017
0.0000
undef
0.0000
|
skeleton
|
Kidneys
0.0022
0.0048
0.4642
2.1540
|
Pancreas
0.0000
0.0055
0.0000
undef
|
Prostate
0.0123
0.0456
0.2687
3.7211
|
T lymphoma
0.0000
0.0000
undef
undef
|
Uterus
0.0015
0.0046
0.3213
3.1125
|
White blood
0.0000
0.0000
undef
undef
|
cells
|
Hematopoetic
0.0013
|
Penis
0.0000
|
Seminal-
0.0070
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0028
|
Brain
0.0000
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0072
|
Adrenal gland
0.0000
|
Kidneys
0.0124
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0051
|
Endocrine tissue
0.0000
|
Fetal
0.0000
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0032
|
Testicles_n
0.0042
|
Testicles_t
0.0000
|
Lungs_n
0.0098
|
Lungs_t
0.0000
|
Nerves
0.0040
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0045
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 158
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0000
0.0000
undef
undef
|
Bladder
0.0039
0.0047
0.8297
1.2052
|
Breast
0.0079
0.0112
0.7045
1.4195
|
Large-
0.0287
0.0142
2.0184
0.4955
|
intestine
|
Small-
0.0192
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0059
0.0167
0.3555
2.8128
|
Endocrine-
0.0064
0.0177
0.3621
2.7613
|
tissue
|
Brain
0.0087
0.0140
0.6217
1.6085
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0139
0.0063
2.1973
0.4551
|
Heart
0.0020
0.0412
0.0492
20.3146
|
Testicles
0.0040
0.0000
undef
0.0000
|
Lungs
0.0039
0.0129
0.3007
3.3256
|
Stomach-
0.0217
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0120
0.0037
3.2472
0.3080
|
skeleton
|
Kidneys
0.0045
0.0048
0.9285
1.0770
|
Pancreas
0.0050
0.0221
0.2244
4.4570
|
Prostate
0.0254
0.0469
0.5426
1.8428
|
T lymphoma
0.0051
0.0075
0.6762
1.4788
|
Uterus
0.0030
0.0092
0.3213
3.1125
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0054
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0278
|
Gastrointestinal
0.0056
|
Brain
0.0125
|
Hematopoetic
0.0039
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0036
|
Lungs
0.0000
|
Adrenal gland
0.0507
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0253
|
Endocrine tissue
0.0000
|
Fetal
0.0075
|
Gastrointestinal
0.0244
|
Hematopoetic
0.0000
|
Skin muscle
0.0097
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0098
|
Lungs_t
0.0000
|
Nerves
0.0141
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0158
|
Prostate_n
0.0243
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 159
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0075
0.0000
undef
0.0000
|
Bladder
0.0000
0.0141
0.0000
undef
|
Breast
0.0026
0.0028
0.9393
1.0646
|
Large-
0.0077
0.0057
1.3456
0.7432
|
intestine
|
Small-
0.0027
0.0107
0.2577
3.8812
|
intestine
|
Ovary
0.0030
0.0095
0.3111
3.2146
|
Endocrine-
0.0064
0.0018
3.6214
0.2761
|
tissue
|
Brain
0.0000
0.0060
0.0000
undef
|
Skin
0.0073
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0190
0.0000
undef
|
Heart
0.0020
0.0000
undef
0.0000
|
Testicles
0.0000
0.0059
0.0000
undef
|
Lungs
0.0010
0.0037
0.2631
3.8007
|
Stomach-
0.0072
0.0064
1.1335
0.8822
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0067
0.0048
1.3927
0.7180
|
Pancreas
0.0050
0.0000
undef
0.0000
|
Prostate
0.0123
0.0260
0.4703
2.1264
|
T lymphoma
0.0101
0.0149
0.6762
1.4788
|
Uterus
0.0044
0.0092
0.4819
2.0750
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0120
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0139
|
Gastrointestinal
0.0194
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0260
|
Heart blood vessels
0.0071
|
Lungs
0.0108
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0121
|
Prostate
0.0499
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0608
|
Endocrine tissue
0.0000
|
Fetal
0.0075
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0000
|
Lungs_t
0.0000
|
Nerves
0.0030
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0293
|
Prostate_n
0.0061
|
Sensory organs
0.0387
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 160
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0125
0.0000
undef
0.0000
|
Bladder
0.0000
0.0023
0.0000
undef
|
Breast
0.0044
0.0056
0.7828
1.2775
|
Large-
0.0019
0.0028
0.6728
1.4864
|
intestine
|
Small-
0.0055
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0059
0.0048
1.2443
0.8036
|
Endocrine-
0.0048
0.0071
0.6790
1.4727
|
tissue
|
Brain
0.0017
0.0050
0.3482
2.8723
|
Skin
0.0037
0.0000
undef
0.0000
|
Hepatic
0.0093
0.0000
undef
0.0000
|
Heart
0.0071
0.0275
0.2584
3.8695
|
Testicles
0.0040
0.0059
0.6786
1.4737
|
Lungs
0.0097
0.0074
1.3155
0.7601
|
Stomach-
0.0072
0.0064
1.1335
0.8822
|
esophagus
|
Muscle-
0.0069
0.0037
1.8555
0.5389
|
skeleton
|
Kidneys
0.0045
0.0048
0.9285
1.0770
|
Pancreas
0.0000
0.0000
undef
undef
|
Prostate
0.0009
0.0104
0.0904
11.0571
|
T lymphoma
0.0025
0.0000
undef
0.0000
|
Uterus
0.0059
0.0092
0.6426
1.5563
|
White blood
0.0000
0.0000
undef
undef
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0083
|
Brain
0.0000
|
Hematopoetic
0.0118
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0178
|
Lungs
0.0181
|
Adrenal gland
0.0000
|
Kidneys
0.0247
|
Placenta
0.0061
|
Prostate
0.0249
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0110
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0194
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0293
|
Lungs_t
0.0000
|
Nerves
0.0020
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0023
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 161
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0000
0.0000
undef
undef
|
Bladder
0.0000
0.0070
0.0000
undef
|
Breast
0.0000
0.0014
0.0000
undef
|
Large-
0.0000
0.0000
undef
undef
|
intestine
|
Small-
0.0000
0.0000
undef
undef
|
intestine
|
Ovary
0.0000
0.0000
undef
undef
|
Endocrine-
0.0000
0.0000
undef
undef
|
tissue
|
Brain
0.0006
0.0030
0.1934
5.1701
|
Skin
0.0037
0.0000
undef
0.0000
|
Hepatic
0.0000
0.0063
0.0000
undef
|
Heart
0.0000
0.0000
undef
undef
|
Testicles
0.0040
0.0000
undef
0.0000
|
Lungs
0.0000
0.0000
undef
undef
|
Stomach-
0.0072
0.0000
undef
0.0000
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0000
0.0000
undef
undef
|
Pancreas
0.0000
0.0000
undef
undef
|
Prostate
0.0038
0.0117
0.3216
3.1098
|
T lymphoma
0.0025
0.0000
undef
0.0000
|
Uterus
0.0015
0.0092
0.1606
6.2251
|
White blood
0.0000
0.0000
undef
undef
|
cells
|
Hematopoetic
0.0000
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0028
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0000
|
Lungs
0.0000
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0012
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0000
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0098
|
Lungs_t
0.0000
|
Nerves
0.0000
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0000
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 162
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0075
0.0000
undef
0.0000
|
Bladder
0.0039
0.0070
0.5532
1.8078
|
Breast
0.0053
0.0028
1.8786
0.5323
|
Large-
0.0038
0.0057
0.6728
1.4864
|
intestine
|
Small-
0.0082
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0030
0.0048
0.6222
1.6073
|
Endocrine-
0.0016
0.0018
0.9054
1.1045
|
tissue
|
Brain
0.0214
0.0030
7.1565
0.1397
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0000
0.0063
0.0000
undef
|
Heart
0.0030
0.0000
undef
0.0000
|
Testicles
0.0040
0.0000
undef
0.0000
|
Lungs
0.0019
0.0092
0.2105
4.7509
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0069
0.0074
0.9278
1.0778
|
skeleton
|
Kidneys
0.0022
0.0000
undef
0.0000
|
Pancreas
0.0017
0.0055
0.2992
3.3427
|
Prostate
0.0066
0.0143
0.4604
2.1719
|
T lymphoma
0.0000
0.0000
undef
undef
|
Uterus
0.0015
0.0046
0.3213
3.1125
|
White blood
0.0068
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0054
|
Seminal-
0.0141
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0056
|
Brain
0.0000
|
Hematopoetic
0.0039
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0036
|
Lungs
0.0036
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0000
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0340
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0051
|
Endocrine tissue
0.0000
|
Fetal
0.0035
|
Gastrointestinal
0.0366
|
Hematopoetic
0.0000
|
Skin muscle
0.0097
|
Testicles_n
0.0000
|
Testicles_t
0.0000
|
Lungs_n
0.0098
|
Lungs_t
0.0000
|
Nerves
0.0201
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0045
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 163
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0050
0.0000
undef
0.0000
|
Bladder
0.0078
0.0117
0.6638
1.5065
|
Breast
0.0070
0.0028
2.5048
0.3992
|
Large-
0.0038
0.0028
1.3456
0.7432
|
intestine
|
Small-
0.0055
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0030
0.0024
1.2443
0.8036
|
Endocrine-
0.0096
0.0106
0.9054
1.1045
|
tissue
|
Brain
0.0046
0.0130
0.3571
2.8005
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0046
0.0000
undef
0.0000
|
Heart
0.0061
0.0000
undef
0.0000
|
Testicles
0.0040
0.0059
0.6786
1.4737
|
Lungs
0.0068
0.0018
3.6835
0.2715
|
Stomach-
0.0145
0.0064
2.2671
0.4411
|
esophagus
|
Muscle-
0.0000
0.0000
undef
undef
|
skeleton
|
Kidneys
0.0022
0.0096
0.2321
4.3081
|
Pancreas
0.0050
0.0110
0.4487
2.2285
|
Prostate
0.0028
0.0065
0.4341
2.3036
|
T lymphoma
0.0025
0.0149
0.1691
5.9152
|
Uterus
0.0030
0.0000
undef
0.0000
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0040
|
Penis
0.0027
|
Seminal-
0.0070
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0111
|
Brain
0.0063
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0000
|
Heart blood vessels
0.0107
|
Lungs
0.0036
|
Adrenal gland
0.0000
|
Kidneys
0.0000
|
Placenta
0.0121
|
Prostate
0.0000
|
Sensory organs
0.0000
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0136
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.0000
|
Ovary_t
0.0203
|
Endocrine tissue
0.0000
|
Fetal
0.0139
|
Gastrointestinal
0.0122
|
Hematopoetic
0.0257
|
Skin muscle
0.0130
|
Testicles_n
0.0125
|
Testicles_t
0.0000
|
Lungs_n
0.0098
|
Lungs_t
0.0000
|
Nerves
0.0100
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0180
|
Prostate_n
0.0000
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
Electronic Northern for SEQ. ID: 164
|
NORMAL
TUMOR
RATIOS
|
% freq.
% freq.
N/T
T/N
|
|
B_Lymphom
0.0000
0.0000
undef
undef
|
Bladder
0.0078
0.0023
3.3190
0.3013
|
Breast
0.0053
0.0126
0.4175
2.3954
|
Large-
0.0057
0.0057
1.0092
0.9909
|
intestine
|
Small-
0.0110
0.0000
undef
0.0000
|
intestine
|
Ovary
0.0119
0.0119
0.9955
1.0046
|
Endocrine-
0.0032
0.0035
0.9054
1.1045
|
tissue
|
Brain
0.0174
0.0040
4.3519
0.2298
|
Skin
0.0000
0.0000
undef
undef
|
Hepatic
0.0093
0.0063
1.4649
0.6826
|
Heart
0.0112
0.0000
undef
0.0000
|
Testicles
0.0120
0.0059
2.0357
0.4912
|
Lungs
0.0068
0.0148
0.4604
2.1719
|
Stomach-
0.0000
0.0000
undef
undef
|
esophagus
|
Muscle-
0.0069
0.0037
1.8555
0.5389
|
skeleton
|
Kidneys
0.0022
0.0048
0.4642
2.1540
|
Pancreas
0.0066
0.0000
undef
0.0000
|
Prostate
0.0019
0.0052
0.3618
2.7643
|
T lymphoma
0.0126
0.0373
0.3381
2.9576
|
Uterus
0.0030
0.0092
0.3213
3.1125
|
White blood
0.0027
0.0000
undef
0.0000
|
cells
|
Hematopoetic
0.0053
|
Penis
0.0000
|
Seminal-
0.0000
|
vesicles
|
Sensory organs
0.0000
|
|
FETUS
|
% freq.
|
|
Development
0.0000
|
Gastrointestinal
0.0083
|
Brain
0.0125
|
Hematopoetic
0.0000
|
Skin
0.0000
|
Hepatic
0.0260
|
Heart blood vessels
0.0036
|
Lungs
0.0181
|
Adrenal gland
0.0000
|
Kidneys
0.0062
|
Placenta
0.0061
|
Prostate
0.0000
|
Sensory organs
0.0126
|
|
STANDARDIZED/
|
SUBTRACTED LIBRARIES
|
% freq.
|
|
Breast
0.0000
|
Breast_t
0.0000
|
Large intestine_t
0.0000
|
Ovary_n
0.1595
|
Ovary_t
0.0000
|
Endocrine tissue
0.0000
|
Fetal
0.0035
|
Gastrointestinal
0.0000
|
Hematopoetic
0.0000
|
Skin muscle
0.0065
|
Testicles_n
0.0042
|
Testicles_t
0.0000
|
Lungs_n
0.0293
|
Lungs_t
0.0000
|
Nerves
0.0090
|
Kidneys_t
0.0000
|
Ovary_Uterus
0.0023
|
Prostate_n
0.0182
|
Sensory organs
0.0000
|
White blood cells
0.0000
|
|
[0078] 2.2. Fisher Test
[0079] In order to decide whether a partial sequence S of a gene occurs significantly more often or less often in a library for normal tissue than in a library for degenerated tissue, Fisher's exact test, a standard statistical process, is carried out (Hays, W. L., (1991) Statistics, Harcourt Brace College Publishers, Fort Worth).
[0080] The null hypothesis reads: The two libraries cannot be distinguished with respect to the frequency of sequences homologous to S. If the null hypothesis can be rejected with high enough certainty, the gene belonging to S is accepted as an advantageous candidate for a cancer gene, and in the next step an attempt is made to achieve lengthening of its sequence.
Automatic Lengthening of the Partial Sequence
[0081] Automatic lengthening of partial sequence S is completed in three steps:
[0082] 1. Determination of all sequences homologous to S from the total set of available sequences using BLAST.
[0083] 2. Assembling these sequences by means of the standard program GAP4 (Bonfield, J. K., Smith, K. F. and Staden, R. (1995), Nucleic Acids Research 23 4992-4999) (contig formation).
[0084] 3. Computation of a consensus sequence C from the assembled sequences.
[0085] Consensus sequence C will generally be longer than initial sequence S. Its electronic Northern Blot will accordingly deviate from that for S. A repeated Fisher test decides whether the alternative hypothesis of deviation from a uniform expression in the two libraries can be maintained. If this is the case, an attempt is made to lengthen C in the same way as S. This iteration is continued with the consensus sequences Ci (i: iteration index) obtained each time until the alternative hypothesis is rejected (if H0 Exit; truncation criterion I) or until automatic lengthening is no longer possible (while Ci>Ci−1; truncation criterion II).
[0086] In the case of truncation criterion II, with the consensus sequence present after the last iteration, a complete or roughly complete sequence of a gene that can be related to cancer with high statistical certainty is acquired.
[0087] Analogously to the above described examples, the nucleic acid sequences described in Table I from prostate tumor tissue were found.
[0088] Furthermore, for the individual nucleic acid sequences the peptide sequences (ORFs) which are listed in Table II were determined, in which no peptide can be assigned to a few nucleic acid sequences and more than one peptide can be assigned to some nucleic acid sequences. As already mentioned above, both the determined nucleic acid sequences and also the peptide sequences assigned to the nucleic acid sequences are the subject of this invention.
Mapping of Nucleic Acid Sequences on the Human Genome
[0089] Human genes were mapped using the Stanford G3 Hybrid Panel (Stewart et al., 1997) which is marketed by Research Genetics, Huntsville, Ala. This panel consists of 83 different genomic DNAs of human-hamster hybrid cell lines and allows resolution of 500 kilobases. The hybrid cell lines were obtained by fusion of irradiated diploid human cells with cells of the Chinese hamster. The retention pattern of the human chromosome fragments is determined by means of gene-specific primers in a polymerase chain reaction and is analyzed using software available from the Stanford RH server (http://www.stanford.edu/RH/rhserver_form2. html). This program determines the STS marker which is nearest the desired gene. The corresponding cytogenetic band was determined using the “Mapview” program of the Genome Database (GDB), (http://gdbwww.dkfz-heidelberg.de). In addition to mapping of genes on the human chromosome set by various experimental methods it is possible to determine the location of genes on this by biocomputer methods. To do this, the known program e-PCR was used (Schuler G D (1998) Electronic PCR: Bridging the Gap Between Genome Mapping and Genome Sequencing. Trends Biotechnol 16: 456-459, Schuler G D (1997). Sequence Mapping By Electronic PCR, Genome Res. 7; 541-550). The database used here no longer corresponds to the one cited in the literature, but is a development that includes data from the public database RHdb (http://www.ebi.ac.uk/RHdb/index.html). Analogously to the mapping by the hybrid panels, the results were evaluated with the aforementioned software and the software of the Whitehead Institute (http://carbon.wi.mit.edu:8000/cgi-bin/contig/rhmapper.pl).
Obtaining Genomic DNA Sequences (BAC Clones)
[0090] The genomic BAC clones containing the corresponding cDNAs (http://www.tree.caltech.edu/; Shizuya, H., B. Birren, U-J. Kim, V. Mancino, T. Slepak, Y. Tachiiri, M. Simon (1992) Proc. Natl. Acad. Sci., USA 89: 8794-8797) were isolated with the procedure of “down-to-the-well”. In this procedure a library consisting of BAC clones (the library covers roughly 3× the human genome) is moved into a certain raster so that the DNA of these clones with a specific PCR can be studied. In doing so “pooling” of the DNA of different BAC clones takes place. Combinatorial analysis makes it possible to determine the clones that contain the desired DNA. By fixing the clones the address of the clones in the library can be determined. This address together with the name of the library which is being used unequivocally fixes the clones and thus the DNA sequence of these clones.
[0091] The following examples explain the successful isolation of the genomic BAC clones without limiting them thereto.
[0092] The libraries used were CITB B and CITB C:
6|
|
Seq.ID No.Identified BACs
|
|
3523-P-21
20446-E-12
33544-K-9552-M-9391-B15228-G-2
36420-I-3395-G-4489-A14
44194-A-22438-F-10491-A-16
50423-P-13327-G-1221-M-24197-M-19
51244-C-10421-G-19
53342-M-13347-N-18
142353-J-9383-F-17404-H-16416-N-2501-A-5
|
[0093]
7
TABLE 1
|
|
|
Length of
Seq. ID
|
Length of
Claimed
of
|
Seq.
Cytogenetic
Nearest
Initial EST
Sequence
Initial
|
ID
Expression
Function
Modules
Localization
Marker
in Bases
in Bases
Sequence
|
|
|
3
elevated in
Human homolog to
Pyropho
10q21.1-
SHGC-36251-
246
1258
|
prostate tumors
bovine inorganic
sphatase
q22.1
D10S1428
|
pyrophosphatase
|
4
elevated in
Unknown
2q35
SHGC-32022-
257
894
|
prostate tumors
D2S126
|
6
elevated in
Human homolog to
TBC
225
1017
|
prostate tumors
a GTPase activating
|
protein from
|
Yarrowia lypolytica
|
7
elevated in
MLN 62
MATH;
17p12-q11.2
D17S798
192
671
|
prostate and
TRAF
|
breast tumors
|
10
elevated in
Unknown
1p36.13-
D1S3153-
225
870
|
prostate tumors
p36.12
D1S2740
|
12
elevated in
BCE-1
2q35
SHGC-32022-
215
1312
|
prostate tumors
D2S126
|
13
elevated in
GATA-3
10p15.1
D10S1431-
230
1008
|
prostate tumors
SHGC-32335
|
15
elevated in
Unknown
19p13.3-
D19S854-
193
706
|
prostate tumors
P13.2
SHGC-36605
|
17
in
Unknown
2q33.1-q33.3
SHGC-36529-
246
450
|
nonstandardized
D2S374
|
or subtracted
|
libraries only
|
detectable in
|
prostate and
|
brain tumors
|
34
elevated in
Unknown
17q11.2
SHGC-2348
386
1563
|
prostate tumors
|
36
ca. 5x more
Homolog to NMDA
8q24.3
AFMA128XH5
298
1557
|
heavily in
|
prostate tumors
|
than in
|
corresponding
|
normal tissue
|
37
5x more heavily
Unknown
18q21.1-
D18S831-
213
1381
|
in prostate
18q21.33
D18S64
|
tumors than in
|
corresponding
|
normal tissue
|
39
ca. 4.5x more
Human homolog to
3q22.1-3q23
SHGC-37132-
224
615
|
heavily in
Sec61
SHGC-30693
|
prostate tumors
|
than in
|
corresponding
|
normal tissue
|
40
8x more heavily
HUMAN INTESTINAL
trefoil
21q22.3
276
834
|
in prostate
TREFOIL FACTOR
|
tumors than in
HP1.B
|
corresponding
|
normal tissue
|
44
elevated in
Unknown
6q12-p12.1
SHGC-10670-
207
997
|
prostate and
SHGC-31710
|
skin tumors
|
45
elevated in
Homolog to human
CATION—
19q13.2-
SHGC-9668-
212
548
|
prostate tumors
metastatin 1
CHAN
q13.41
SHGC-30929
|
NEL_TRPL
|
46
elevated in
Unknown
9q21.32-
D9S1120-
241
1448
|
prostate tumors
q22.1
D9S1812
|
47
elevated in
Homolog to a
16p13.3-
D16S521-
165
1163
|
prostate tumors
protein kinase C
q24.3
SHGC-2951
|
substrate
|
48
elevated in
Unknown
19q13.2-
NIB1805-WI-
260
906
|
prostate tumors
q13.41
9028
|
49
elevated in
Unknown
2p24.3
D2S1288
259
1222
|
prostate tumors
|
50
elevated in
Unknown
277
649
|
prostate tumors
|
51
elevated in
Unknown
272
1226
|
prostate tumors
|
52
elevated in
Unknown
12q24.22-
D12S1619-
249
1036
|
prostate tumors
q24.23
D12S1915
|
53
elevated in
Homology to the
Ribosomal—
10q11.1-
D10S1571-
228
758
|
prostate tumors
family of high
L7A
q23.1
D10S583
|
mobility group
|
proteins
|
142
elevated in
Calcyclin-
1q24-25
WI-3733-WI-
317
1663
|
prostate tumors
binding protein
5780
|
144
expressed
Unknown
2q35
SHGC-32022-
2105
4
|
2.1719x in the
D2S126
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
145
expressed
Human homolog to
TBC
1125
6
|
1.8304x in the
a GTPase
|
prostate tumor
activating
|
compared to
protein from
|
normal prostate
Yarrowia
|
tissue
lypolytica
|
146
expressed
Unknown
1p36.l3-
D1S3153-
1490
10
|
1.935x in the
p36.12
D1S2740
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
147
expressed BCE-1
2q35
SHGC-32022-
1692
12
|
2.3036x in the
D2S126
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
148
expressed
Unknown
19p13.3-
D19S854-
866
15
|
2.1361x in the
p13.2
SHGC-36605
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
149
expressed
Unknown
2q33.1-q33.3
SHGC-36529-
992
17
|
2.0732x in the
D2S374
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
150
expressed
Human homolog to
GAMMA—
1640
20
|
1.3821x in the
tyrosine-protein
CARB
|
prostate tumor
kinase 1 from
OXYLASE
|
compared to
Dictyostelium
|
normal prostate
discoideurm
|
tissue
|
151
expressed
Human homolog to
zf-C2H2
16p11.2
SHGC-2727-
974
22
|
4.1464x in the
ZPF-29 from mice
SHGC-35326
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
152
expressed
Homolog to
15q25.1-
SHGC-30592-
1059
27
|
1.9294x in the
DYNANIN-1
q25.3
SHGC-35120
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
153
expressed
Unknown
10q21.1-21.3
D10S1688-
2003
31
|
2.7643x in the
SHGC-33649
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
154
expressed
Human homolog to
HSP70
1130
33
|
4.1465x in the
NST-1 from mice
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
155
expressed
Phosphatidyl
17q11.2
SHGC-2348
5779
34
|
1.9745x. in the
inositol-4-
|
prostate tumor
phosphate-5-
|
compared to
kinase type 2
|
normal prostate
beta
|
tissue
|
156
expressed
Lysophospholipase
ESTERASE
6q12-p12.1
SHGC-10670-
2408
44
|
3.1098x in the
SHGC-31710
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
157
expressed
Homolog to human
CATION—
19q13.2-
SHGC-9668-
1548
45
|
3.7211x in the
metastatin 1
CHANNEL-
q13.41
SHGC-30929
|
prostate tumor
TRPL
|
compared to
|
normal prostate
|
tissue
|
158
expressed
Unknown
9q21.32-
D9S1120-
2319
46
|
1.8428x in the
q22.1
D9S1812
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
18
elevated in
Unknown
Xq25-28
DXS1062-
233
418
|
prostate tumors
DXS9754
|
19
only in
Homolog to
20q13.2
D20S197-
282
549
|
prostate and
inositol
SHGC-33731
|
breast tumors
polyphosphate-4-
|
phosphatase type
|
1 beta
|
20
elevated in
Unknown
249
999
|
prostate tumors
|
21
elevated in
Unknown
4q31.22-
D4S397-
301
311
|
prostate tumors
31.23
D4S2965
|
22
elevated in
Unknown
16p11.2
SHGC-2727-
231
527
|
prostate tumors
SHGC-35326
|
23
detectable only
Unknown
9q21.31-
SHGC-35114-
224
359
|
in prostate
21.32
D9S1122
|
tumors
|
24
elevated in
Unknown
2p11.1-2p12
D2S388-
242
1482
|
prostate tumors
D2S2579
|
26
detectable only
Unknown
2q11.2
D2S2311-
229
316
|
in prostate
D2S2886
|
tumors
|
27
elevated in
Homolog to
15q25.1-
SHGC-30592-
209
369
|
prostate tumor
DYNAMIN-1
q25.3
SHGC-35120
|
and hyperplasia
|
29
detectable in
Unknown
6q23.1-23.3
D6S1835-
260
591
|
normal lung
D6S1569
|
tissue, in
|
prostate and
|
endocrine
|
tumors
|
31
elevated in
Unknown
10q21.1-21.3
D10S1688-
241
1631
|
prostate tumors
SHGC-33649
|
33
elevated in
Human homolog to
HSP70
247
844
|
prostate tumors
NST-1 from mice
|
159
expressed
Unknown
19q13.2-
NIB1805-WI-
1467
48
|
2.1264x in the
q13.41
9028
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
160
expressed
Unknown
2p24.3
D2S1288
1348
49
|
11.0571x in the
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
161
expressed
Unknown
1290
51
|
3.1098x in the
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
162
expressed
Unknown
12q24.22-
D12S1619-
2912
52
|
2.1719x in the
q24.23
D12S1915
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
163
expressed
Homology to the
Ribosom
10q11.1-
D10S1571-
850
53
|
2.3036x in the
family of high
al—
q23.1
D10S583
|
prostate tumor
mobility group
L7Ae
|
compared to
proteins
|
normal prostate
|
tissue
|
164
expressed
Calcyclin-
1q24-25
WI-3733-WI-
2223
142
|
2.7643x in the
binding protein
5780
|
prostate tumor
|
compared to
|
normal prostate
|
tissue
|
|
[0094]
8
TABLE 2
|
|
|
DNA Sequence
Peptide
Sequence
|
Seq ID No.
(ORFs)
Seq ID No.
|
|
|
3
57
|
4
58
|
6
59
60
|
7
61
|
10
64
|
12
66
67
|
13
68
|
15
70
71
|
17
73
74
|
18
75
|
19
76
77
|
20
78
79
|
21
80
|
22
81
|
23
82
|
24
83
|
26
85
|
27
86
|
29
87
|
31
89
90
|
33
|
34
92
|
36
94
|
37
95
|
39
|
40
97
|
44
101
102
103
104
105
|
45
106
107
108
|
46
109
110
111
|
47
112
113
114
|
48
115
116
117
118
119
120
121
|
49
122
123
124
125
|
50
126
127
128
129
|
51
130
131
132
|
52
133
134
135
136
137
|
53
138
139
140
141
|
142
143
|
144
165
166
|
145
167
|
146
168
169
|
147
170
171
|
148
172
173
|
149
174
175
|
150
176
177
|
151
178
|
152
179
180
|
153
181
182
|
154
183
|
155
184
|
156
185
|
157
186
187
|
158
188
189
|
159
190
191
|
160
192
193
|
161
194
195
|
162
196
197
|
163
198
|
164
199
|
|
[0095] The inventive nucleic acid sequences Seq. ID No. 3, 4, 6, 7, 10, 12, 13, 15, 17-24, 26, 27, 29, 31-34, 36, 37, 39, 40, 44-53; 142 144-164 of the determined candidate genes and the determined amino acid sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 are described in the following sequence protocol.
Claims
- 1. A nucleic acid sequence that codes a gene product or a part thereof, comprising
a) a nucleic acid sequence selected from the group Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 b) an allelic variation of the nucleic acid sequences named under a) or c) a nucleic acid sequence that is complementary to the nucleic acid sequences named under a) or b).
- 2. A nucleic acid sequence according to one of the sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164, or a complementary or allelic variant thereof.
- 3. Nucleic acid sequence Seq. ID No. 3, 4, 6, 7, 10, 12, 13, 15, 17-24, 26, 27, 29, 31-34, 36, 37, 39, 40, 44-53; 142, 144-164, characterized in that it is expressed elevated in prostate tumor tissue.
- 4. BAC, PAC and Cosmid clones containing functional genes and their chromosomal localization according to sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 for use as a vehicle for gene transfer.
- 5. A nucleic acid sequence according to claims 1 to 4, wherein it has 90% homology to a human nucleic acid sequence.
- 6. A nucleic acid sequence according to claims 1 to 4, wherein it has 95% homology to a human nucleic acid sequence.
- 7. A nucleic acid sequence comprising a portion of the nucleic acid sequences named in claims 1 to 6, in such a sufficient amount that they hybridize with the sequences according to claims 1 to 6.
- 8. A nucleic acid sequence according to claims 1 to 7, wherein the size of the fragment has a length of at least 50 to 2000 bp.
- 9. A nucleic acid sequence according to claims 1 to 7, wherein the size of the fragment has a length of at least 150 to 1700 bp.
- 10. A nucleic acid sequence according to one of claims 1 to 9, which codes at least one partial sequence of a bioactive polypeptide.
- 11. An expression cassette comprising a nucleic acid fragment or a sequence according to one of claims 1 to 9, together with at least one control or regulatory sequence.
- 12. An expression cassette, comprising a nucleic acid fragment or a sequence according to claim 11, in which the control or regulatory sequence is a suitable promoter.
- 13. An expression cassette according to one of claims 11 and 12, wherein the DNA sequences located on the cassette code a fusion protein that comprises a known protein and a bioactive polypeptide fragment.
- 14. Use of nucleic acid sequences according to claims 1 to 10 for producing full-length genes.
- 15. A DNA fragment, comprising a gene, which can be obtained from an application according to claim 14.
- 16. Host cell, containing as the heterologous part of its expressible genetic information a nucleic acid fragment according to one of claims 1 to 10.
- 17. Host cell according to claim 16, wherein it is a prokaryotic or eukaryotic cell system.
- 18. Host cell according to one of claims 16 or 17, wherein the prokaryotic cell system is E. coli and the eukaryotic cell system is an animal, human or yeast cell system.
- 19. A process for producing a polypeptide or a fragment, wherein the host cells according to claims 16 to 18 are cultivated.
- 20. An antibody which is directed against a polypeptide or a fragment, which by the nucleic acids of sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164, which can be obtained according to claim 19.
- 21. An antibody according to claim 20, wherein it is monoclonal.
- 22. A protein according to claim 20, wherein it originates from a phage display.
- 23. Polypeptide partial sequences according to sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199.
- 24. Polypeptide partial sequences according to claim 22, with at least 80% homology to these sequences.
- 25. Polypeptide partial sequences according to claim 22, with at least 90% homology to these sequences.
- 26. Use of polypeptide partial sequences according to sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 as tools for finding active agents against prostate cancer.
- 27. Use of nucleic acid sequences according to sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164 for expression of polypeptides which can be used as tools for finding active agents against prostate cancer.
- 28. Use of nucleic acid sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27-29, 31-34, 36, 39, 44 53; 142, 144-164 in sense or antisense form.
- 29. Use of polypeptide partial sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 as pharmaceutical agents in gene therapy for treatment of prostate cancer.
- 30. Use of polypeptide partial sequences Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199 to produce a pharmaceutical agent for treatment of prostate cancer.
- 31. Pharmaceutical agent, containing at least one polypeptide partial sequence Seq. ID No. 57-61, 64, 66-68, 70-71, 73-83, 85-87, 89-90, 92, 94, 95, 97, 101-141, 143 and 165-199.
- 32. A nucleic acid sequence according to claims 1 to 10, wherein it is a genomic sequence.
- 33. A nucleic acid sequence according to claims 1 to 10, wherein it is an mRNA sequence.
- 34. Genomic genes, their promoters, enhancers, silencers, exon structure, intron structure and their splice variants, obtainable from cDNAs of sequences Seq. ID No. 3, 4, 6; 10, 12, 15, 17-24, 27, 29, 31-34, 36, 39, 44-53; 142, 144-164.
- 35. Use of the genomic genes according to claim 33, together with suitable regulatory elements.
- 36. Use according to claim 34, wherein the regulatory element is a suitable promoter and/or enhancer.
Priority Claims (1)
Number |
Date |
Country |
Kind |
198 11 193.2 |
Mar 1998 |
DE |
|
Divisions (1)
|
Number |
Date |
Country |
Parent |
09623791 |
Dec 2000 |
US |
Child |
10131487 |
Apr 2002 |
US |