This application claims the priority to GB Patent Application No. 1820950.2, filed on Dec. 21, 2018, which application is hereby incorporated herein by reference in its entirety.
This invention relates to the field of mass spectrometry, in particular time-of-flight mass spectrometry and electrostatic trap mass spectrometry. The invention especially relates to time-of-flight mass spectrometry and electrostatic trap mass spectrometry utilizing multi-reflection techniques for extending the ion flight path and increasing mass resolution.
Time of flight (ToF) mass spectrometers are widely used to determine the mass to charge ratio (m/z) of ions on the basis of their flight time along a flight path. In ToF mass spectrometry, short ion pulses are generated by a pulsed ion injector and directed along a prescribed flight path through an evacuated space to reach an ion detector. The detector then detects the arrival of the ions and provides an output to a data acquisition system. The ions in a pulse become separated according to their m/z based on their time-of-flight along the flight path and arrive at the detector as time-separated short ion packets.
Various arrangements utilizing multi-reflections to extend the flight path of ions within mass spectrometers are known. Flight path extension is desirable to increase time-of-flight separation of ions within time-of-flight (ToF) mass spectrometers or to increase the trapping time of ions within electrostatic trap (EST) mass spectrometers. In both cases the ability to distinguish small mass differences between ions is thereby improved. Improved resolution, along with advantages in increased mass accuracy and sensitivity that typically come with it, is an important attribute for a mass spectrometer for a wide range of applications, particularly with regard to applications in biological science, such as proteomics and metabolomics for example.
Mass resolution in time-of-flight mass spectrometers is known to increase in proportion to the length of the ions' flight path, assuming that ion focal properties remain constant. Unfortunately, ion energy distributions and space charge interactions can cause ions to spread out in flight, which in long systems can cause them to be lost from the analyser or to reach the detector at a highly aberrant time-of-flight.
Giles and Gill disclosed in U.S. Pat. No. 9,136,100 that additional focusing lenses at an intermediate position within the flight tube of a conventional single reflection ToF analyser, as shown in
Nazerenko et al in SU1725289 disclosed a multi-reflection time-of-flight analyser (MR-ToF) composed of two opposing ion mirrors, elongated in a drift direction. Ions oscillate between the mirrors whilst they drift down the length of the system, in the drift direction, to a detector, such that the ions follow a zigzag flight path, reflecting between the mirrors and thereby resulting in the folding of a long flight path into a relatively compact volume as illustrated in
A solution to the problem of drift divergence has been demonstrated by Verenchikov in GB2403063. The solution uses periodically spaced lenses located within the field-free region between the two parallel elongated opposing mirrors as shown in
Sudakov in WO2008/047891 also disclosed a system comprising two opposing ion mirrors, elongated in a drift direction, but proposed an alternative means for both doubling the flight path length by returning ions back along the drift length and at the same time inducing beam convergence in the drift direction. Sudakov proposed segmentation of the opposing mirrors to create a superimposed third mirror in the drift direction as shown in
Grinfeld and Makarov in U.S. Pat. No. 9,136,101 disclosed a practical way of achieving reflection in the drift direction in a system compromising two opposing ion mirrors, elongated in the drift direction. They disclosed reflection in the drift direction provided by converging opposing mirrors, which create a pseudo-potential gradient along the drift direction that acts as an ion mirror to reverse the ion drift velocity as well as spatially focus the ions in the drift direction to a focal point where a detector is placed. A specially shaped central correction or compensation electrode is used to correct ToF aberrations induced by the non-constant mirror separation. This arrangement, shown in
In view of the above, it can be seen that improvements are still desired in multi-reflection time-of-flight (MR ToF) and electrostatic trap (MR-EST) mass spectrometers. Desired properties of such spectrometers include extended flight path in a time-of-flight analyser to provide high resolution (e.g. >50K), whilst maintaining relatively compact size, high ion transmission, robust construction with tolerance to small mechanical deviations.
The present invention provides in one aspect a multi-reflection mass spectrometer comprising:
The ion focusing arrangement ensures that the detector detects only ions that have completed exactly the same number N of reflections between the ion mirrors, i.e. N reflections between leaving the ion injector and being detected by the detector.
Preferably, due to the focusing properties of the ion focusing arrangement, the ion beam width in the drift direction Y is substantially the same at the ion detector as at the ion focusing arrangement. The spatial spread of the ion beam in the drift direction on the first reflection is preferably substantially the same as the spatial spread of the ion beam in the drift direction on the N-th reflection. Preferably, the spatial spread of the ion beam in the drift direction Y passes through a single minimum that is substantially halfway along the ion path between the ion focusing arrangement and the detector.
Preferably, the ion focusing arrangement comprises a drift focusing lens or pair of drift focusing lenses for focusing the ions in the drift direction Y. Preferably at least one drift focusing lens is a converging lens (i.e. has a converging effect on the ion beam width, especially in the drift direction Y). Preferably, the converging lens focuses the ions such that the spatial spread of the ion beam in the drift direction Y has a maximum at the converging lens that is 1.2-1.6 times, or about √2 times, the minimum spatial spread. Furthermore, preferably the spatial spread of the ion beam in the drift direction Y has a maximum at the converging lens that is in the range 2× to 20× an initial spatial spread of the ion beam in the drift direction Y at the ion injector. The drift focusing lens (or lenses) is preferably located centrally in the space between the ion mirrors, i.e. halfway between the ion mirrors, in the X direction, although in some embodiments the lens (lenses) may be located away from this central position in the X direction.
The ion beam undergoes a total of K oscillations between the ion mirrors from the ion injector to the ion detector. In each oscillation the ions travel a distance that is double the mirror separation distance and thus K is equal to N/2, where N is the total number of reflections between the mirrors. The value K is preferably a value within a range that is +/−50%, or +/−40%, or +/−30%, or +/−20%, or +/−10% around an optimum value, K(opt) given by:
wherein DL is the drift length travelled by the ion beam in the drift direction Y, Π is the phase volume wherein Π=δαi·δxi and δαi is the initial angular spread and δxi is the initial spatial spread of the ion beam at the ion injector, and W is the distance between the ion mirrors in the X direction. It is preferable that the angular spread of the ion beam, δαi after focusing by the ion focusing arrangement is within a range that is +/−50%, or +/−40%, or +/−30%, or +/−20%, or +/−10% around an optimum value, δα(opt) given by:
Preferably, the initial spatial spread of the ion beam in the drift direction Y at the ion injector, δxi, is 0.25-10 mm or 0.5-5 mm.
The ion focusing arrangement is preferably located before the N/4th reflection in the ion mirrors or before a reflection having a number less than 0.25N. In some preferred embodiments, the ion focusing arrangement comprises a drift focusing lens positioned after a first reflection and before a fifth reflection in the ion mirrors (especially before a fourth, third or second reflection). More preferably, the ion focusing arrangement comprises a drift focusing lens positioned after a first reflection in the ion mirrors and before a second reflection in the ion mirrors. In some preferred embodiments, the ion focusing arrangement has only a single drift focusing lens positioned after the first reflection and before the detector. In such embodiments, the single drift focusing lens is preferably positioned after the first reflection and before a second reflection in the ion mirrors.
Preferably, the drift focusing lens, or lenses where more than one drift focusing lens is present, comprises a trans-axial lens, wherein the trans-axial lens comprises a pair of opposing lens electrodes positioned either side of the beam in a direction Z, wherein direction Z is perpendicular to directions X and Y. Preferably, each of the opposing lens electrodes comprises a circular, elliptical, quasi-elliptical or arc-shaped electrode. In some embodiments, each of the pair of opposing lens electrodes comprises an array of electrodes separated by a resistor chain to mimic a field curvature created by an electrode having a curved edge. In some embodiments, the opposing lens electrodes are each placed within an electrically grounded assembly. In some embodiments, the lens electrodes are each placed within a deflector electrode. Further preferably each deflector electrode placed within an electrically grounded assembly. The deflector electrodes preferably have an outer trapezoid shape that acts as a deflector of the ion beam.
In some embodiments, the drift focusing lens comprises a multipole rod assembly. In some embodiments, the drift focusing lens comprises an Einzel lens (a series of electrically biased apertures).
In some preferred embodiments, the ion focusing arrangement comprises a first drift focusing lens that is a diverging lens in the drift direction Y (i.e. has a diverging effect on the ion beam width, especially in the drift direction Y) and a second drift focusing lens that is a converging lens in the drift direction Y), the second drift focusing lens being downstream of the first drift focusing lens. In some preferred embodiments, the ion focusing arrangement comprises a first drift focusing lens positioned before the first reflection in the ion mirrors for focusing the ion beam in the drift direction Y, wherein the first drift focusing lens is a diverging lens, and a second drift focusing lens positioned after the first reflection in the ion mirrors for focusing the ion beam in the drift direction Y, wherein the second drift focusing lens is a converging lens (i.e. has a converging effect on the ion beam width, especially in the drift direction Y).
In some embodiments, the ion focusing arrangement comprises at least one injection ion deflector positioned before the first reflection in the ion mirrors, for example for adjusting the inclination angle of the ion beam as it is injected. Preferably, the inclination angle to the X direction of the ion beam is determined by an angle of ion ejection from the pulsed ion injector relative to the direction X and/or a deflection caused by the injection deflector positioned before the first reflection in the ion mirrors. In certain embodiments, the first drift focusing lens can be placed within the at least one injection deflector. In some embodiments, the ion focusing arrangement comprises at least one ion deflector positioned after the first reflection in the ion mirrors but preferably before the fourth, third or most preferably second reflections, optionally in addition to an injection ion deflector positioned before the first reflection. The ion deflector positioned after the first reflection may be used to adjust or optimise the ion beam alignment. In some preferred embodiments, the mass spectrometer further comprises one or more compensation electrodes extending along at least a portion of the drift direction Y in or adjacent the space between the mirrors for minimising time of flight aberrations, e.g. caused by beam deflections.
In some embodiments, a reversing deflector is located at a distal end of the ion mirrors from the ion injector to reduce or reverse the drift velocity of the ions in the direction Y. In such embodiments, preferably a further drift focusing lens is located between the opposing ion mirrors one, two or three reflections before the reversing deflector to focus the ion beam to a focal minimum within the reversing deflector. In some a further drift focusing lens is positioned within, or proximate (adjacent) to, the reversing deflector to focus the ion beam to a focal minimum within one of the ion mirrors at the next reflection after the reversing deflector. In such embodiments, preferably the ion beam passes through the reversing deflector twice, on each pass receiving half the deflection need to completely reverse the ion drift velocity such that after the second pass the ion drift velocity is completely reversed.
In some embodiments, wherein the detector is located at an opposite end of the ion mirrors in the drift direction Y from the ion injector, the ion mirrors diverge from each other along a portion of their length in the direction Y as the ions travel towards the detector. In some embodiments, starting from the end of the ion mirrors closest to the ion injector, the ion mirrors converge towards each other (decreasing distance between the mirrors) along a first portion of their length in the direction Y and diverge from each other (increasing distance between the mirrors) along a second portion of their length in the direction Y, the second portion of length being adjacent the detector.
In some embodiments, the mass spectrometer can be used for imaging, wherein the detector is an imaging detector, such as a 2D or pixel detector, i.e. a position sensitive detector.
In another aspect, the present invention provides a method of mass spectrometry. The mass spectrometer of the present invention may be used to perform the method. The features of the mass spectrometer thus also apply mutatis mutandis to the method. The method of mass spectrometry comprises:
Preferably, the focusing is such that the spatial spread of the ion beam in the drift direction on the first reflection is substantially the same as the spatial spread of the ion beam in the drift direction on the N-th reflection. Preferably, the focusing is such that the spatial spread of the ion beam in the drift direction Y passes through a single minimum that is substantially halfway along the ion path between the ion focusing arrangement and the detector. Preferably, the ion beam undergoes K oscillations between the ion mirrors and K is a value within a range that is +/−50%, or +/−40%, or +/−30%, or +/−20%, or +/−10% around an optimum value, K(opt) given by:
wherein DL is the drift length travelled by the ion beam in the drift direction Y, Π is the phase volume wherein Π=δαi,δxi and δαi is an initial angular spread and δxi is an initial spatial spread of the ion beam, and W is the distance between the ion mirrors in the X direction.
Preferably, the angular spread of the ion beam, δα, after focusing is within a range that is +/−50%, or +/−40%, or +/−30%, or +/−20%, or +/−10% around an optimum value, δα(opt) given by:
Preferably, the focusing is performed using an ion focusing arrangement located before a reflection having a number less than 0.25N in the ion mirrors. Preferably, an initial spatial spread of the ion beam in the drift direction Y at an ion injector, δxi, is 0.25-10 mm or 0.5-5 mm.
Preferably, the ion focusing arrangement comprises a drift focusing lens positioned after a first reflection in the ion mirrors and before a fifth reflection in the ion mirrors.
In some embodiments, the method further comprises deflecting the ion beam using a deflector positioned after a first reflection in the ion mirrors and before a fifth reflection in the ion mirrors.
In some embodiments of the method, the ion focusing arrangement comprises a first drift focusing lens positioned before the first reflection in the ion mirrors for focusing the ion beam in the drift direction Y, wherein the first drift focusing lens is a diverging lens, and a second drift focusing lens positioned after the first reflection in the ion mirrors for focusing the ion beam in the drift direction Y, wherein the second drift focusing lens is a converging lens.
In some embodiments, the method comprises deflecting the ion beam using an injection deflector positioned before the first reflection in the ion mirrors.
In some embodiments, the method further comprises adjusting the inclination angle to the X direction of the ion beam by deflecting the ion beam using the injection deflector.
In some embodiments, the method further comprises applying one or more voltages to respective one or more compensation electrodes extending along at least a portion of the drift direction Y in or adjacent the space between the mirrors to minimise time of flight aberrations.
In some embodiments, the method further comprises deflecting the ion beam using a reversing deflector at a distal end of the ion mirrors from the injection to reduce or reverse the drift velocity of the ions in the direction Y. In some such embodiments, the method further comprises focusing the ion beam to a focal minimum within the reversing deflector. In some embodiments, the method further comprises a focusing lens within or proximate (adjacent) to the reversing deflector and focusing the ion beam to a focal minimum within one of the ion mirrors at the next reflection after the reversing deflector. In such embodiments, preferably the ion beam passes through the reversing deflector twice, on each pass receiving half the deflection need to completely reverse the ion drift velocity such that after the second pass the ion drift velocity is completely reversed.
In some embodiments, the detecting comprises forming a 2-D image of an ion source, e.g. on an imaging detector, such as a 2D or pixel detector.
Problems in extended path multi-reflection time of flight mass spectrometers can arise from the need to control ion beam divergence within the analyser, as ions can become lost from the system or reach the detector at aberrant times, harming sensitivity and resolution or complicating the mass spectrum. Prior art methods have met with some success in this regard but generally require the highest mechanical precision and alignment and/or complicated construction. GB2478300 proposed allowing beam divergence in such a system and using signal processing to generate single peaks from the data. This prior art mentions the possibility of using a long focus lens between the ion source and detector to alter the number and position of overtones (by altering drift focal properties), whereas the present disclosure describes the use of a drift focusing arrangement to eliminate overtones. Furthermore, the present disclosure does not comprise regular or periodic focusing lenses after every reflection, every other reflection or every few reflections, e.g. of the type of periodic focusing lenses shown in GB2403063. Compared to periodic focusing, the present invention is simpler, more tuneable and easier to align, whilst allowing for a more diffuse ion beam and thus better space charge performance.
This disclosure details the use of a long drift focus ion lens, or in some embodiments pair of ion lenses (e.g. in a telescopic configuration where a first one diverges the beam and a second one converges the beam), to reduce the drift spread of an ion beam within a multi-reflection ToF (MR-ToF) analyser or multi-reflection electrostatic trap (MR-EST) analyser. In this way, approximately all ions from an ion source or injector are brought to a detector over a reasonably long, e.g. >10 m, ion flight path and without substantial introduced ToF aberrations. Thus, high mass resolution and high ion transmission can be achieved. The use of a further drift focusing lens within the ion injection region is also advantageous as the combination of two lenses allows a doubling of the initial spatial distribution of the ion beam, or alternatively a doubling of the flight path before alternating trajectories overlap.
The present invention is also designed to be more tolerant to mechanical error than the converging mirror system disclosed in U.S. Pat. No. 9,136,101.
Preferably, methods of mass spectrometry using the present invention comprise injecting ions into the multi-reflection mass spectrometer from one end of the opposing ion-optical mirrors, the ions having a component of velocity in the drift direction Y.
A pulsed ion injector injects pulses of ions into the space between the ion mirrors at a non-zero inclination angle to the X direction, the ions thereby forming an ion beam that follows a zigzag ion path N reflections between the ion mirrors in the direction X whilst drifting along the drift direction Y. N is an integer value of at least 2. Thus, the ion beam undergoes at least 2 reflections between the ion mirrors in the direction X whilst drifting along the drift direction Y.
Preferably, the number N of ion reflections in the ion mirrors along the ion path from the ion injector to the detector is at least 3, or at least 10 or at least 30, or at least 50, or at least 100. Preferably, the number N of ion reflections in the ion mirrors along the ion path from the ion injector to the detector is from 2 to 100, 3 to 100, or 10 to 100, or over 100, e.g. one of the groups: (i) from 3 to 10; (ii) from 10 to 30; (iii) from 30 to 100; (iv) over 100.
Ions injected into the spectrometer are preferably repeatedly reflected back and forth in the X direction between the mirrors, whilst they drift down the Y direction of mirror elongation (in the +Y direction). Overall, the ion motion follows a zigzag path.
In certain embodiments, as described hereafter, after a number of reflections (typically N/2), the ions can be reversed in their drift velocity along Y and then repeatedly reflected back and forth in the X direction between the mirrors whilst they drift back up the Y direction.
For convenience herein, the drift direction shall be termed the Y direction, the opposing mirrors are set apart from one another by a distance in what shall be termed the X direction, the X direction being orthogonal to the Y direction, this distance can be the same (such that the ion mirrors lie substantially parallel) or can vary at different locations along the Y direction. The ion flight path, simply termed herein the ion path, generally occupies a volume of space which extends in the X and Y directions, the ions reflecting between the opposing mirrors (in the X direction) and at the same time progressing along the drift direction Y. Generally, the ion beam undergoes an average shift dY in the drift direction Y per single ion reflection.
The mirrors typically being of smaller dimensions in the perpendicular Z direction (Z being perpendicular to X and Y), the volume of space occupied by the ion flight path is typically a slightly distorted rectangular parallelepiped with a smallest dimension preferably being in the Z direction. For convenience of the description herein, ions are injected into the mass spectrometer with initial components of velocity in the +X and +Y directions, progressing initially towards a first ion mirror located in a +X direction and along the drift length in a +Y direction. Thus, after the first reflection in the first ion mirror, the reflected ions travel in the −X direction toward the second ion mirror still with velocity in the +Y direction. After the second reflection, the ions again travel in the +X and +Y direction and so on. The average component of ion velocity in the Z direction is preferably zero.
The resolving power is dependent upon the initial angle of ion injection into the space between the mirrors (herein termed the inclination angle, which is the angle of ion injection to the X direction in the X-Y plane), which determines the drift velocity and therefore the overall time of flight. Ideally, this inclination angle of injection should be minimised to maximise the number of reflections and thus the ion path length and the mass resolving power, but such minimising of the inclination angle can be restricted by mechanical requirements of the injection apparatus and/or of the detector, especially for more compact designs. Advantageously, aspects of the present invention allow the number of ion oscillations within the mirrors structure and thereby the total flight path length to be altered by changing the ion injection angle.
In some embodiments, a deflector can be positioned between the mirrors to reduce the drift velocity after ion injection. In other embodiments, a decelerating stage, such as described in US 2018-0138026 A1, can be built into the mirror structure itself to reduce the drift velocity, e.g. after the first one or two reflections, and thus allow for an increase of the flight time and consequent resolution to be made. In such embodiments, there may be no need for an additional deflector to be incorporated between the mirrors, thus reducing the number of parts and cost.
The ion injector generally receives ions from an ion source, whether directly or indirectly via one or more ion optical devices (e.g. one or more of an ion guide, lens, mass filter, collision cell). The ion source ionises sample species to form the ions. Suitable ion sources are well known in the art, e.g. electrospray ionisation, chemical ionisation, atmospheric pressure chemical ionisation, MALDI etc. In some embodiments, the ion injector itself can be the ion source (e.g. MALDI source). The ion source may ionise multiple sample species, eg. from a chromatograph, to form the ions.
The ion injector is generally a pulsed ion source, i.e. injecting non-continuous pulses of ions, rather than a continuous stream of ions. As known in the art of ToF mass spectrometry, the pulsed ion injector forms short ion packets comprising at least a portion of said ions from the ion source. Typically, an acceleration voltage is applied by the ion injector to inject the ions into the mirrors, which can be several kV, such as 3 kV, 4 kV or 5 kV.
The ion injector may comprise a pulsed ion injector, such as an ion trap, an orthogonal accelerator, MALDI source, secondary ion source (SIMS source), or other known ion injection means for a ToF mass spectrometer. Preferably, the ion injector comprises a pulsed ion trap, more preferably a linear ion trap, such as a rectilinear ion trap or a curved linear ion trap (C-Trap). The ion injector is preferably located at the Y=0 position. The detector in some embodiments, where the ion flight is reversed in the Y direction after a number of reflections, can be similarly located at Y=0.
The ion injector preferably injects ion pulses of limited initial width in the drift direction Y. In an embodiment, the ion pulse can be generated from an ion cloud accumulated in an ion trap. It is then pulse-ejected into the ion mirrors. The trap may provide an ion cloud of limited width in the drift direction. In preferred embodiments, the ion cloud in the ion injector that is injected towards the ion mirrors has a width in the drift direction Y of 0.25 to 10 mm, or 0.5 to 10 mm, preferably 0.25 to 5 mm or 0.5-5 mm, e.g. 1 mm, or 2 mm, or 3 mm, or 4 mm. This thereby defines an initial ion beam width.
The ion injector injects ions from one end of the mirrors into the space between the mirrors at an inclination angle to the X axis in the X-Y plane such that ions are reflected from one opposing mirror to the other a plurality of times whilst drifting along the drift direction away from the ion injector so as to follow a generally zigzag path within the mass spectrometer.
The ion injector is preferably located proximate to one end of the opposing ion-optical mirrors in the drift direction Y so that ions can be injected into the multi-reflection mass spectrometer from one end of the opposing ion-optical mirrors in the drift direction (injection in the +Y direction).
The ion injector for injecting ions as an ion beam into the space between the ion mirrors at an inclination angle to the X direction preferably lies in the X-Y plane. Thereafter, the injected ions following their zigzag path between the ion mirrors in the X-Y plane. However, the ion injector can lie outside the X-Y plane such that ions are injected towards the X-Y plane and are deflected by a deflector when they reach the X-Y plane to thereafter follow their zigzag path between the ion mirrors within the X-Y plane. In some embodiments, C-shaped isochronous ion interfaces or sectors may be used for ion injection as disclosed in U.S. Pat. No. 7,326,925.
The ion focusing arrangement generally is located on the ion path. The ion focusing arrangement is generally positioned along the ion path between the ion injector and the detector. The ion focusing arrangement is preferably positioned along the ion path closer to the ion injector than the detector. For example, it is preferred to locate the ion focusing arrangement along the ion path between first and fifth reflections, or first and fourth reflections, or first and third reflections, or more preferably between the first and second reflections.
The ion focusing arrangement is at least partly located between the opposing ion mirrors. In some embodiments, the ion focusing arrangement is located wholly between the mirrors (i.e. in the space between the mirrors), and in other embodiments the ion focusing arrangement is located partly between the mirrors and partly outside the space between the mirrors. For example, one lens of the ion focusing arrangement can be located outside of the space between the ion mirrors while another lens of the ion focusing arrangement is located between the ion mirrors.
The ion focusing arrangement is configured to provide focusing of the ions in the drift direction. Typically, the ion focusing arrangement comprises a focusing lens that causes the ion beam to converge in the direct direction Y, herein referred to as a converging lens. The ion focusing arrangement or lens has a long focal length providing a single focal minimum (i.e. minimum spatial spread) in the drift direction Y along the ion path at or immediately after a reflection (i.e. before the next reflection) having a number between 0.25N and 0.75N, i.e. the spatial spread of the ion beam in the drift direction Y passes through a single minimum at or immediately after a reflection having a number between the 0.25N and 0.75N. Typically, a single focal minimum occurs approximately or substantially halfway between the first and last (N-th) reflections. For example, this means that the single focal minimum (minimum spatial spread) in the drift direction Y may occur along the ion path at a point that is halfway between the first and N-th reflections +/−20%, or +/−10%, or +/−5% of the total ion path length between the first and N-th reflections. In this way, the ion focusing arrangement generally can provide that the single focal minimum (minimum spatial spread) in the drift direction Y occurs approximately or substantially halfway along the ion path between the ion focusing arrangement (i.e. the converging lens of the ion focusing arrangement) and the detector. For example, the single focal minimum (minimum spatial spread) in the drift direction Y may occur along the ion path at a point that is halfway between the ion focusing arrangement (i.e. the converging lens of the ion focusing arrangement) and the detector +/−20% or +/−10% of the total ion path length between the ion focusing arrangement and the detector. Thus the ion focusing arrangement according to the present disclosure does not provide multiple focal minima (minima of spatial spread) in the drift direction Y along the ion path, unlike periodic focusing arrangements of the prior art.
Furthermore, the ion focusing arrangement through these focusing properties provides that the spatial spread of the ions in the drift direction Y on the first reflection is substantially the same (e.g. within +/−30%, +/−20%, or preferably +/−10%) as the spatial spread of the ions in the drift direction Y on the N-th reflection. The spatial spread on the first (or N-th) reflection herein means the spatial spread of the ions in the drift direction Y immediately downstream of the reflection, e.g. at the first crossing of the midpoint between the ion mirrors in the direction X after the first (or N-th) reflection. Similarly, this can provide that the spatial spread of the ions in the drift direction Y at the detector is substantially the same (e.g. within +/−30%, +/−20%, or preferably +/−10%) as the spatial spread of the ions in the drift direction Y at the ion focusing arrangement (i.e. the converging lens of the ion focusing arrangement). The spatial spread of the ions in the drift direction Y at the converging lens of the ion focusing arrangement (and preferably on the final, N-th reflection and/or at the detector) for a 0.25-10 mm or 0.5-5 mm initial ion beam width range (i.e. spatial spread in the drift direction Y) of 5-25 mm, or 5-15 mm. In preferred embodiments, the ion beam width in the drift direction Y at its maximum at the converging lens of the ion focusing arrangement is in the range 2 to 20 times (2× to 20×) the initial ion beam width (e.g. initial ion beam width from the pulses of ions at the ion injector, at an ejection point from the ion injector). This is determined by the phase volume of the ion beam, which is determined by the ion injector, as well as the dimensions of the mirrors (mirror separation distance (W) and mirror length in drift direction Y). In embodiments, the ion beam width or spatial spread of the ions in the drift direction Y at the single minimum (focal minimum or so-called gorge) is generally about 1/√2 of the maximum ion beam width at the lens (for example, 0.65-0.75, or ˜0.7 of the maximum ion beam width at the lens). Expressed conversely, the converging lens focuses the ions such that the spatial spread of the ion beam in the drift direction Y has a maximum at the converging lens that is 1.2 to 1.6 times, or 1.3-1.5 times, or about √2 times, the minimum spatial spread.
Advantageously, the focusing properties of the ion focusing arrangement ensure that substantially all or all detected ions are detected after completing the same number of reflections N between the ion mirrors. In this way, no overtones are detected, i.e. ions that have undergone a different number of reflections in the ion mirrors (more or less than N).
In some embodiments, at least one focusing lens (a so-called drift focusing lens that focuses ions at least or primarily in the drift direction Y) is located on the ion path. In some embodiments, at least two focusing lens are located on the ion path, for example a pair of lenses. In some such embodiments, a first focusing lens may be positioned before the first reflection of the ions in the ion mirrors and a second focusing lens may be positioned before the first reflection of the ions in the ion mirrors (e.g. between the first and fifth reflections, preferably between first and fourth reflections, or between first and third reflections or most preferably between first and second reflections). In some embodiments, the first focusing lens can be a lens that produces a divergence (increased spatial spread) of the ions in the drift direction Y (i.e. defocusing lens). A second focusing lens is then provided as a focusing lens that produces a convergence of the ions in the drift direction Y, in which the minimum of the spatial spread of the ions in the drift direction Y occurs substantially halfway along the ion path between the second lens of the ion focusing arrangement and the detector. Thus, the ion focusing arrangement can comprise one or more ion focusing lenses. In some embodiments wherein the ion focusing arrangement comprises a plurality of focusing lenses, the final lens on the ion path produces a convergence of the ions in the drift direction Y, in which the minimum of the spatial spread of the ions in the drift direction Y occurs substantially halfway along the ion path between the final lens of the ion focusing arrangement and the detector.
The present disclosure further provides a method of mass spectrometry comprising the steps of injecting ions into the multi-reflection mass spectrometer, for example in such form as a pulsed ion beam as known for ToF mass spectrometry, and detecting at least some of the ions during or after their passage through the mass spectrometer using the ion detector.
Ion detectors known in the art of ToF mass spectrometry can be used. Examples include SEM detectors or microchannel plates (MCP) detectors, or detectors incorporating SEM or MCP combined with a scintillator/photodetector. In some embodiments, the detector can be positioned at the opposite end of the ion mirrors in the drift direction Y to the ion injector. In other embodiments, the detector can be positioned in a region adjacent the ion injector, for example substantially at or near to the same Y position as the ion injector. In such embodiments the ion detector may be positioned, for example, within a distance (centre to centre) of 50 mm, or within 40 mm or within 30 mm or within 20 mm of the ion injector.
Preferably the ion detector is arranged to have a detection surface which is parallel to the drift direction Y, i.e. the detection surface is parallel to the Y axis. In some embodiments, the detector may have a degree of inclination to the Y direction, preferably by an amount to match the angle of the ion isochronous plane, for example a degree of inclination of 1 to 5 degrees, or 1 to 4 degrees, or 1 to 3 degrees. The detector may be located in the direction X at a position intermediate between the ion mirrors, e.g. centrally or halfway between the ion mirrors.
The multi-reflection mass spectrometer may form all or part of a multi-reflection time-of-flight mass spectrometer. In such embodiments of the invention, preferably the ion detector located in a region adjacent the ion injector is arranged to have a detection surface which is parallel to the drift direction Y, i.e. the detection surface is parallel to the Y axis. Preferably the ion detector is arranged so that ions that have traversed the mass spectrometer, moving forth and back between the mirrors along the drift direction as described herein, impinge upon the ion detection surface and are detected. The ions may undergo an integer or a non-integer number of complete oscillations K between the mirrors before impinging upon a detector. Advantageously, the ion detector detects all the ions after they have completed exactly the same number N of reflections between the ion mirrors.
The multi-reflection mass spectrometer may form all or part of a multi-reflection electrostatic trap mass spectrometer, as will be further described. In such embodiments of the invention, the detector preferably comprises one or more electrodes arranged to be close to the ion beam as it passes by, but located so as not to intercept it, the detection electrodes connected to a sensitive amplifier enabling the image current induced in the detection electrodes to be measured.
The ion mirrors may comprise any known type of elongated ion mirror. The ion mirrors are typically electrostatic ion mirrors. The mirrors may be gridded or the mirrors may be gridless. Preferably the mirrors are gridless. The ion mirrors are typically planar ion mirrors, especially electrostatic planar ion mirrors. In numerous embodiments, the planar ion mirrors are parallel to each other, for example over the majority or the entirety of their length in the drift direction Y. In some embodiments, the ion mirrors may not be parallel over a short length in the drift direction Y (e.g. at their entrance end closest to the ion injector as in US 2018-0138026 A). The mirrors are typically substantially the same length in the drift direction Y. The ion mirrors are preferably separated by a region of electric field free space.
The ion optical mirrors oppose one another. By opposing mirrors it is meant that the mirrors are oriented so that ions directed into a first mirror are reflected out of the first mirror towards a second mirror and ions entering the second mirror are reflected out of the second mirror towards the first mirror. The opposing mirrors therefore have components of electric field which are generally oriented in opposite directions and facing one another.
Each mirror is preferably made of a plurality of elongated parallel bar electrodes, the electrodes elongated generally in the direction Y. Such constructions of mirrors are known in the art, for example as described in SU172528 or US2015/0028197. The elongated electrodes of the ion mirrors may be provided as mounted metal bars or as metal tracks on a PCB base. The elongated electrodes may be made of a metal having a low coefficient of thermal expansion such as Invar such that the time of flight is resistant to changes in temperature within the instrument. The electrode shape of the ion mirrors can be precisely machined or obtained by wire erosion manufacturing.
The mirror length (total length of both first and second stages) is not particularly limited in the invention but preferred practical embodiments have a total length in the range 300-500 mm, more preferably 350-450 mm.
The multi-reflection mass spectrometer comprises two ion mirrors, each mirror elongated predominantly in one direction Y. The elongation may be linear (i.e. straight), or the elongation may be non-linear (e.g. curved or comprising a series of small steps so as to approximate a curve), as will be further described. The elongation shape of each mirror may be the same or it may be different. Preferably the elongation shape for each mirror is the same. Preferably the mirrors are a pair of symmetrical mirrors. Where the elongation is linear, the mirrors can be parallel to each other, although in some embodiments, the mirrors may not be parallel to each other.
As herein described, the two mirrors are aligned to one another so that they lie in the X-Y plane and so that the elongated dimensions of both mirrors lie generally in the drift direction Y. The mirrors are spaced apart and oppose one another in the X direction. The distance or gap between the ion mirrors can be conveniently arranged to be constant as a function of the drift distance, i.e. as a function of Y, the elongated dimension of the mirrors. In this way the ion mirrors are arranged parallel to each other. However, in some embodiments, the distance or gap between the mirrors can be arranged to vary as a function of the drift distance, i.e. as a function of Y, the elongated dimensions of both mirrors will not lie precisely in the Y direction and for this reason the mirrors are described as being elongated generally along the drift direction Y. Thus, being elongated generally along the drift direction Y can also be understood as being elongated primarily or substantially along the drift direction Y. In some embodiments of the invention the elongated dimension of at least one mirror may be at an angle to the direction Y for at least a portion of its length.
Herein, the distance between the opposing ion mirrors in the X direction means an effective distance in the X direction between the average turning points of ions within the mirrors. A precise definition of the effective distance W between the mirrors, which generally have a field-free region between them, is the product of the average ion velocity in the field-free region and the time lapse between two consecutive turning points, which is independent of the ion's mass-to-charge ratio. An average turning point of ions within a mirror herein means the maximum point or distance in the +/−X direction within the mirror that ions having average kinetic energy and average initial angular divergence characteristics reach, i.e. the point at which such ions are turned around in the X direction before proceeding back out of the mirror. Ions having a given kinetic energy in the +/−X direction are turned around at an equipotential surface within the mirror. The locus of such points at all positions along the drift direction Y of a particular mirror defines the turning points for that mirror, and the locus is hereinafter termed an average reflection surface. In both the description and claims, reference to the distance between the opposing ion-optical mirrors is intended to mean the distance between the opposing average reflection surfaces of the mirrors as just defined. In the present invention, immediately before the ions enter each of the opposing mirrors at any point along the elongated length of the mirrors they possess their original kinetic energy in the +/−X direction. The distance between the opposing ion mirrors may therefore also be defined as the distance between opposing equipotential surfaces where the nominal ions (those having average kinetic energy and average initial angular incidence) turn in the X direction, the said equipotential surfaces extending along the elongated length of the mirrors.
In the present invention, the mechanical construction of the mirrors themselves may appear, under superficial inspection, to maintain a constant distance apart in X as a function of Y, whilst the average reflection surfaces may actually be at differing distances apart in X as a function of Y. For example, one or more of the opposing ion mirrors may be formed from conductive tracks disposed upon an insulating former (such as a printed circuit board) and the former of one such mirror may be arranged a constant distance apart from an opposing mirror along the whole of the drift length whilst the conductive tracks disposed upon the former may not be a constant distance from electrodes in the opposing mirror. Even if electrodes of both mirrors are arranged a constant distance apart along the whole drift length, different electrodes may be biased with different electrical potentials within one or both mirrors along the drift lengths, causing the distance between the opposing average reflection surfaces of the mirrors to vary along the drift length. Thus, the distance between the opposing ion-optical mirrors in the X direction varies along at least a portion of the length of the mirrors in the drift direction.
Preferably, a distance between the opposing ion mirrors in the X direction is constant or varies smoothly as a function of the drift distance. In some embodiments of the present invention the variation in distance between the opposing ion mirrors in the X direction varies linearly as a function of the drift distance, or in two linear stages, i.e. the distance between the opposing ion-optical mirrors in the X direction varies as a first linear function of the drift distance for the first portion of the length and varies as a second linear function of the drift distance for the second portion of the length, the first linear function having a higher gradient than the second linear function (i.e. the distance between the opposing ion-optical mirrors in the X direction varying more greatly as a function of the drift distance for the first linear function than the second). In some embodiments of the present invention the variation in distance between the opposing ion-optical mirrors in the X direction varies non-linearly as a function of the drift distance.
The two elongated ion-optical mirrors may be similar to each other or they may differ. For example, one mirror may comprise a grid whilst the other may not; one mirror may comprise a curved portion whilst the other mirror may be straight. Preferably both mirrors are gridless and similar to each other. Most preferably the mirrors are gridless and symmetrical.
The mirror structures may be continuous in the drift direction Y, i.e. not sectioned, and this eliminates ion beam scattering associated with the step-wise change in the electric field in the gaps between such sections.
Advantageously, embodiments of the present invention may be constructed without the inclusion of any additional lenses or diaphragms in the region between the opposing ion optical mirrors. However additional lenses or diaphragms might be used with the present invention in order to affect the phase-space volume of ions within the mass spectrometer and embodiments are conceived comprising one or more lenses and diaphragms located in the space between the mirrors.
In some embodiments, the mass spectrometer of the present invention includes one or more compensation electrodes in the space between the mirrors to minimise the impact of time of flight aberrations caused by for example mirror misalignment. The compensation electrodes extend along at least a portion of the drift direction in or adjacent the space between the mirrors.
In some embodiments of the present invention, compensation electrodes are used with the opposing ion optical mirrors elongated generally along the drift direction. In some embodiments, the compensation electrodes are used in combination with non-parallel ion mirrors. In some embodiments, the compensation electrodes create components of electric field which oppose ion motion along the +Y direction along at least a portion of the ion optical mirror lengths in the drift direction. These components of electric field preferably provide or contribute to a returning force upon the ions as they move along the drift direction.
The one or more compensation electrodes may be of any shape and size relative to the mirrors of the multi-reflection mass spectrometer. In preferred embodiments the one or more compensation electrodes comprise extended surfaces parallel to the X-Y plane facing the ion beam, the electrodes being displaced in +/−Z from the ion beam flight path, i.e. each one or more electrodes preferably having a surface substantially parallel to the X-Y plane, and where there are two such electrodes, preferably being located either side of a space extending between the opposing mirrors. In another preferred embodiment, the one or more compensation electrodes are elongated in the Y direction along a substantial portion of the drift length, each electrode being located either side of the space extending between the opposing mirrors. In this embodiment preferably the one or more compensation electrodes are elongated in the Y direction along a substantial portion, the substantial portion being at least one or more of: 1/10; ⅕; ¼; ⅓; ½; ¾ of the total drift length. In some embodiments, the one or more compensation electrodes comprise two compensation electrodes elongated in the Y direction along a substantial portion of the drift length, the substantial portion being at least one or more of: 1/10; ⅕; ¼; ⅓; ½; ¾ of the total drift length, one electrode displaced in the +Z direction from the ion beam flight path, the other electrode displaced in the −Z direction from the ion beam flight path, the two electrodes thereby being located either side of a space extending between the opposing mirrors. However other geometries are anticipated. The one or more compensation electrodes can be elongated in the Y direction along substantially the first and second portions of the length along direction Y (i.e. along both stages of the different mirror convergence), or for example substantially along only the second portion of the length. Preferably, the compensation electrodes are electrically biased in use such that the total time of flight of ions is substantially independent of the incidence angle of the ions. As the total drift length travelled by the ions is dependent upon the incidence angle of the ions, the total time of flight of ions is substantially independent of the drift length travelled.
Compensation electrodes may be biased with an electrical potential. Where a pair of compensation electrodes is used, each electrode of the pair may have the same electrical potential applied to it, or the two electrodes may have differing electrical potentials applied. Preferably, where there are two electrodes, the electrodes are located symmetrically either side of a space extending between the opposing mirrors and the electrodes are both electrically biased with substantially equal potentials.
In some embodiments, one or more pairs of compensation electrodes may have each electrode in the pair biased with the same electrical potential and that electrical potential may be zero volts with respect to what is herein termed as an analyser reference potential. Typically the analyser reference potential will be ground potential, but it will be appreciated that the analyser may be arbitrarily raised in potential, i.e. the whole analyser may be floated up or down in potential with respect to ground. As used herein, zero potential or zero volts is used to denote a zero potential difference with respect to the analyser reference potential and the term non-zero potential is used to denote a non-zero potential difference with respect to the analyser reference potential. Typically the analyser reference potential is, for example, applied to shielding such as electrodes used to terminate mirrors, and as herein defined is the potential in the drift space between the opposing ion optical mirrors in the absence of all other electrodes besides those comprising the mirrors.
In preferred embodiments, two or more pairs of opposing compensation electrodes are provided. In such embodiments, some pairs of compensation electrodes in which each electrode is electrically biased with zero volts are further referred to as unbiased compensation electrodes, and other pairs of compensation electrodes having non-zero electric potentials applied are further referred to as biased compensation electrodes. Typically the unbiased compensation electrodes terminate the fields from biased compensation electrodes. In one embodiment, surfaces of at least one pair of compensation electrodes have a profile in the X-Y plane, such that the said surfaces extend towards each mirror a greater distance in the regions near one or both the ends of the mirrors than in the central region between the ends. In another embodiment, at least one pair of compensation electrodes have surfaces having a profile in the X-Y plane, such that the said surfaces extend towards each mirror a lesser distance in the regions near one or both the ends of the mirrors than in the central region between the ends. In such embodiments preferably the pair(s) of compensation electrodes extend along the drift direction Y from a region adjacent an ion injector at one end of the elongated mirrors, and the compensation electrodes are substantially the same length in the drift direction as the extended mirrors, and are located either side of a space between the mirrors. In alternative embodiments, the compensation electrode surfaces as just described may be made up of multiple discrete electrodes.
Preferably, in all embodiments of the present invention, the compensation electrodes do not comprise ion optical mirrors in which the ion beam encounters a potential barrier at least as large as the kinetic energy of the ions in the drift direction. However, as has already been stated and will be further described, they preferably create components of electric field which oppose ion motion along the +Y direction along at least a portion of the ion optical mirror lengths in the drift direction.
Preferably the one or more compensation electrodes are, in use, electrically biased so as to compensate for at least some of the time-of-flight aberrations generated by the opposing mirrors. Where there is more than one compensation electrode, the compensation electrodes may be biased with the same electrical potential, or they may be biased with different electrical potentials. Where there is more than one compensation electrode one or more of the compensation electrodes may be biased with a non-zero electrical potential whilst other compensation electrodes may be held at another electrical potential, which may be zero potential. In use, some compensation electrodes may serve the purpose of limiting the spatial extent of the electric field of other compensation electrodes.
In some embodiments, one or more compensation electrodes may comprise a plate coated with an electrically resistive material which has different electrical potentials applied to it at different ends of the plate in the Y direction, thereby creating an electrode having a surface with a varying electrical potential across it as a function of the drift direction Y. Accordingly, electrically biased compensation electrodes may be held at no one single potential. Preferably the one or more compensation electrodes are, in use, electrically biased so as to compensate for a time-of-flight shift in the drift direction generated by misalignment or manufacturing tolerances of the opposing mirrors and so as to make a total time-of-flight shift of the system substantially independent of such misalignment or manufacturing.
The electrical potentials applied to compensation electrodes may be held constant or may be varied in time. Preferably the potentials applied to the compensation electrodes are held constant in time whilst ions propagate through the multi-reflection mass spectrometer. The electrical bias applied to the compensation electrodes may be such as to cause ions passing in the vicinity of a compensation electrode so biased to decelerate, or to accelerate, the shapes of the compensation electrodes differing accordingly, examples of which will be further described. As herein described, the term “width” as applied to compensation electrodes refers to the physical dimension of the biased compensation electrode in the +/−X direction. It will be appreciated that potentials (i.e. electric potentials) and electric fields provided by the ion mirrors and/or potentials and electric fields provided by the compensation electrodes are present when the ion mirrors and/or compensation electrodes respectively are electrically biased.
The biased compensation electrodes located adjacent or in the space between the ion mirrors can be positioned between two or more unbiased (grounded) electrodes in the X-Y plane that are also located adjacent or in the space between the ion mirrors. The shapes of the unbiased electrodes can be complementary to the shape of the biased compensation electrodes.
In some preferred embodiments, the space between the opposing ion optical mirrors is open ended in the X-Z plane at each end of the drift length. By open ended in the X-Z plane it is meant that the mirrors are not bounded by electrodes in the X-Z plane which fully or substantially span the gap between the mirrors.
Embodiments of the multi-reflection mass spectrometer of the present invention may form all or part of a multi-reflection electrostatic trap mass spectrometer. A preferred electrostatic trap mass spectrometer comprises two multi-reflection mass spectrometers arranged end to end symmetrically about an X axis such that their respective drift directions are collinear, the multi-reflection mass spectrometers thereby defining a volume within which, in use, ions follow a closed path with isochronous properties in both the drift directions and in an ion flight direction. Such systems are described in US2015/0028197 and shown in FIG. 13 of that document, the disclosure of which is hereby incorporated by reference in its entirety (however, where anything in the incorporated reference contradicts anything stated in the present application, the present application prevails). A plurality of pairs (e.g. four pairs in the case of two multi-reflection mass spectrometers arranged end to end) of stripe-shaped detection electrodes can be used for readout of an induced-current signal on every pass of the ions between the mirrors. The electrodes in each pair are symmetrically separated in the Z-direction and can be located in the planes of compensation electrodes or closer to the ion beam. The electrode pairs are connected to the direct input of a differential amplifier and the electrode pairs are connected to the inverse input of the differential amplifier, thus providing differential induced-current signal, which advantageously reduces the noise. To obtain the mass spectrum, the induced-current signal is processed in known ways using the Fourier transform algorithms or specialized comb-sampling algorithm, as described by J. B. Greenwood at al. in Rev. Sci. Instr. 82, 043103 (2011).
The multi-reflection mass spectrometer of the present invention may form all or part of a multi-reflection time-of-flight mass spectrometer.
A composite mass spectrometer may be formed comprising two or more multi-reflection mass spectrometers according to the invention aligned so that the X-Y planes of each mass spectrometer are parallel and optionally displaced from one another in a perpendicular direction Z, the composite mass spectrometer further comprising ion-optical means to direct ions from one multi-reflection mass spectrometer to another. In one such embodiment of a composite mass spectrometer a set of multi-reflection mass spectrometers are stacked one upon another in the Z direction and ions are passed from a first multi-reflection mass spectrometer in the stack to further multi-reflection mass spectrometers in the stack by means of deflection means, such as electrostatic electrode deflectors, thereby providing an extended flight path composite mass spectrometer in which ions do not follow the same path more than once, allowing full mass range TOF analysis as there is no overlap of ions. Such systems are described in US2015/0028197 and shown in
Alternatively, embodiments of the present invention may be used with a further beam deflection means arranged to turn ions around and pass them back through the multi-reflection mass spectrometer or composite mass spectrometer one or more times, thereby multiplying the flight path length, though at the expense of mass range.
Analysis systems for MS/MS may be provided using the present invention comprising a multi-reflection mass spectrometer and, an ion injector comprising an ion trapping device upstream of the mass spectrometer, and a pulsed ion gate, a high energy collision cell and a time-of-flight analyser downstream of the mass spectrometer. Such systems are described in US2015/0028197 and shown in FIG. 15 of that document. Moreover, the same analyser could be used for both stages of analysis or multiple such stages of analysis thereby providing the capability of MSn, by configuring the collision cell so that ions emerging from the collision cell are directed back into the ion trapping device.
As a result of time-of-flight focussing in both X and Y directions, the ions arrive at substantially same coordinate in the Y direction at the detector after a designated number of oscillations between the mirrors in X direction. Spatial focussing on the detector is thereby achieved and the mass spectrometer construction is greatly simplified.
Various embodiments of the invention will now be described with reference to the figures. These embodiments are intended to illustrate features of the invention and are not intended to be limiting on the scope of the invention. It will be appreciated that variations to the embodiments can be made while still falling within the scope of the invention as defined by the claims.
A multi-reflection mass spectrometer 2 according to an embodiment of the present invention is shown in
Suitable ion mirrors such as 6 and 8 are well understood from the prior art (e.g. U.S. Pat. No. 9,136,101). An example configuration of ion mirror, like that shown in
After the first reflection in the first ion mirror 6, the ion beam expands substantially under thermal drift to about 8 mm in width in the drift direction and meets an ion focusing arrangement in the form of a drift focusing lens 12, which focuses the ion beam in the drift direction Y. The drift focusing lens 12 is located in the direction X centrally in the space between the mirrors, i.e. halfway between the mirrors. The drift focusing lens 12 in this embodiment is a trans-axial lens comprising a pair of opposing lens electrodes positioned either side of the beam in a direction Z (perpendicular to directions X and Y). Specifically, the drift focusing lens 12 comprises a pair of quasi-elliptical plates 12a, 12b located above and below the ion beam. The lens may be referred to as a button-shaped lens. In this embodiment, the plates are 7 mm wide and 24 mm long with about −100V applied. In some embodiments, the pair of opposing lens electrodes may comprise circular, elliptical, quasi-elliptical or arc-shaped electrodes. The drift focusing lens 12 has a converging effect on the ion beam by reducing an angular spread of the ions in the drift direction Y.
After focusing by the focusing lens 12, the ion beam 5 proceeds to undergo multiple further reflections between the ion mirrors in the direction X whilst drifting along the drift direction Y so as to follow a zigzag ion path in the X-Y plane between the ion mirrors (there being a total of N mirror reflections in the system). After completing N reflections (i.e. N/2 “oscillations”, where an oscillation is equal to twice the distance between consecutive reflections in the direction X), the ions are detected by an ion detector 14 to permit the time of flight of the ions to be detected. A data acquisition system comprising a processor (not shown) is interfaced to the detector and enables a mass spectrum to be produced. In the embodiment shown, the ions undergo 22 reflections (N=22), giving a total flight path of more than 10 metres. The detector is preferably a fast time response detector such as a multi-channel plate (MCP) or dynode electron multiplier with magnetic and electric fields for electron focusing.
Important factors for the positioning of the drift focusing lens 12 have been determined. Firstly, the ion beam should preferably have expanded sufficiently so that by the time it reaches the focusing lens the effect of the lens on the drift energy or angular spread is maximised relative to its effect on the spatial spread. This means that the ion beam must be allowed to expand before it reaches the drift focusing lens. Thus, it is preferable to position the lens after the first reflection in the ion mirror 6 (unless the mirror separation is very large, for example 500 mm). Secondly, for an injection of an ion beam at a 2 degree inclination angle to the direction X into a mass spectrometer system of this size, the reflections of the central ion trajectory (i.e. centre of the ion beam) are separated by less than 25 mm, and it is important that the focusing lens not be so large as to interfere with adjacent ion trajectories. Without drift focusing, the ion beam would be already 20 mm wide by the third reflection and by the fourth reflection trajectories nearly start to overlap with those of other reflections. The optimum position for the drift focusing lens is therefore preferably after the first but before the fourth or fifth reflection in the system, i.e. it is positioned relatively early in a system such as this, which has a total of 22 reflections (N=22). The optimum position for the drift focusing lens is preferably before the reflection with a number less than 0.25N or less than 0.2N. The optimum position for the drift focusing lens is more preferably after the first reflection but before the second or third reflection (especially before the second).
The concept of placing button shaped electrodes (e.g. circular, oval, elliptical or quasi-elliptical) above and below the ion beam to generate drift focusing in a multi-turn ToF instrument, albeit in a periodic manner and constructed within an orbital geometry, is described in US 2014/175274 A, the contents of which is hereby incorporated by reference in its entirety. Such lenses are a form of “transaxial lens” (see P. W Hawkes and E Kasper, Principles of Electron Optics Volume 2, Academic Press, London, 1989, the contents of which is hereby incorporated by reference in its entirety). Such lenses have an advantage of having a wide spatial acceptance, which is important to control such an elongated ion beam. The lenses need to be wide enough to both accommodate the ion beam and so that the 3D field perturbation from the sides of the lens does not damage the focal properties. The space between the lenses should likewise be a compromise between minimising these 3D perturbations and accommodating the height of the beam. In practice, a distance of 4-8 mm can be sufficient.
A variation in lens curvature from a circular (button) lens to a narrow ellipse shaped lens is possible. A quasi-elliptical structure taking a short arc reduces the time-of-flight aberrations compared to a wider arc or full circle as the path through it is shorter but it requires stronger voltages and at extremes will start to induce considerable lensing out-of-plane. This effect may be harnessed for some combination of control of drift and out-of-plane dispersion in a single lens, but will limit the range of control over each property. As an adjunct, areas where strong fields are already applied, such as the ion extraction region at the ion trap 4, may be exploited via curvature of the ion trap pull/push electrodes to either induce or limit drift divergence of the ion beam. An example of this is the commercial Curved Linear Ion Trap (C-trap) described in US 2011-284737 A, the contents of which is hereby incorporated by reference in its entirety, where an elongated ion beam is focused to a point to aid injection into an Orbitrap™ mass analyser.
An extraction ion trap 40 suitable for use as the ion trap 4 is shown in
In addition to the ion trap 4, 40, it is preferred to have several further ion optical elements to control the injection of ions into the analyser (“injection optics”). Such ion injection optics may be considered part of the ion focusing arrangement. Firstly, it is beneficial to have out of plane focusing lenses (i.e. focusing in a direction out of the X-Y plane, i.e. in the direction Z) along the path between the ion trap 4 and the first mirror 6. Such out of plane focusing lenses can comprise elongated apertures that improve the transmission of ions into the mirror. Secondly, a portion, e.g. half, of the injection angle of the ion beam to the X direction as it enters the mirror can be provided by the angle of the ion trap to the X direction, and the remainder, e.g. the other half, can be provided by at least one deflector located in front of the ion trap (a so-called injection deflector). The injection deflector is generally positioned before the first reflection in the ion mirrors. The injection deflector can comprises at least one injection deflector electrode (e.g. a pair of electrodes positioned above and below the ion beam). In this way, the isochronous plane of the ions will be correctly aligned to the analyser rather than being 2 degrees misaligned with corresponding time-of-flight errors. Such a method is detailed in U.S. Pat. No. 9,136,101. The injection deflector may be a prism type deflector of the types shown in
It has been found that this additional drift focusing lens, mounted between the extraction ion trap 4 (or optionally incorporated into the ion trap itself by utilising for example a curved pull/adjacent ground electrode) and the first reflection and operated in a diverging manner is beneficial as it allows control of the ion beam divergence before the beam reaches the converging lens 12. Even more beneficially, the additional drift focusing lens mounted between the extraction ion trap 4 and the first reflection can be mounted within an injection deflector as described above and shown in the injection optics scheme of
It is preferable that the converging drift focusing lens 12, mounted after the first reflection, also incorporates an ion deflector, e.g. the prism type shown in
In U.S. Pat. No. 9,136,101, elongate electrodes (termed therein “compensation electrodes”) with a low voltage (e.g. ˜20V) are used to correct the time-of-flight error caused by the many hundreds of microns of mirror convergence. Similar electrodes, following linear or curved or even complex functions can be used in the present invention to correct for small misalignments or curvature of the mirror electrodes. One or more sets of compensation electrodes can be used wherein each set comprises a pair of elongate electrodes, one electrode positioned above the ion beam and one electrode positioned below the ion beam. The sets of compensation electrodes preferably extend for most of the length of the ion mirrors in the drift direction Y. Whilst such compensation electrodes can be considered for many error functions, the primary mechanical errors are likely to be non-parallelism of mirror electrodes and curvature around the centre, thus two sets of compensation electrodes should be sufficient, preferably each set of compensation electrodes having a different profile in the X-Y plane, e.g. one set having a profile in the X-Y plane that follows a linear function and one set with a profile in the X-Y plane that follows a curved function. The two sets of compensation electrodes are preferably placed side-by-side in the space between the ion mirrors. A set having a profile in the X-Y plane that follows a linear function, when biased, can correct for mirror tilt or misalignment. A set having a profile in the X-Y plane that follows a curved function, when biased, can correct for mirror curvature. The only disadvantage is that such compensation electrodes may add to any unwanted deflection of the ion beam, which can then be corrected by an appropriate voltage on the deflector, i.e. the deflector positioned between the mirrors after the first reflection.
An example of a preferred embodiment, comprising ion injection optics, drift focusing lenses and deflectors, and compensation electrodes is shown schematically in
It has been found that having a diverging lens located shortly after the ion injector (ion trap), preferably between the ion injector and the first reflection, is beneficial to optimise the expansion of the ion beam before it reaches the main drift focusing lens (the converging focusing lens). Thus, a “telescopic” lens system is preferred. The diverging lens preferably has a strong voltage applied to it as the beam is initially very narrow. In the embodiments described above with reference to
The difficulty in collimating an ion beam with lenses comes from ions initially having independent distributions in space and energy. A lens that controls expansion due to the initial ion energy spread will induce convergence from the initial spatial spread. This cannot be eliminated but may be minimised by allowing (or inducing) a large expansion in the beam width. As complete collimation is impossible, it has been found that having a small convergence of the ion beam after the focusing lens is preferable. In order to maximise the ion beam path length, the ion beam spatial spread in the drift direction passes through a single minimum at a mid-way point between the converging drift focusing lens and the detector. After the minimum the ion beam then begins to diverge until the ion beam strikes the detector plane with a similar spatial spread as the beam had at the drift focusing lens. The focusing system is represented schematically in
An optimised analytical solution is now described. The mass resolving power of a ToF mass spectrometer is known to be proportional to the total flight length L. In a multi-reflection ToF mass spectrometer of the type described
ΔD=W/sin θ
where θ is the injection angle (the angle of the ion beam to the direction X as it enters the mirrors and thus reflects between the mirrors, around 2 degrees being typical). Accordingly, the number of oscillation on the whole drift length DL is:
K=DL/ΔD
This may be increased by choosing a smaller injection angle that leads to a smaller drift step ΔD. The drift step has, nevertheless, a low limit ΔD(min) determined by a minimal separation between neighbouring oscillations.
The phase volume of the ion beam in the direction of drift is denoted as Π. As the phase volume is constant along a trajectory according to the Liouville's theorem, Π is determined by the ion injector and cannot be modified by any collimation optics. Such optics may, however, be used to ‘prepare’ the ion beam before injection into the analyser by setting the optimal ratio between the spatial and the angular spreads and optimal correlation.
There is a minimum of the ion-beam spatial spread δx0 on the oscillation k0. As there are no optical elements for collimating the ion trajectories in the drift direction between the first and the last oscillations, the angular spread δα stays constant and the spatial spread on any oscillation k is:
δx[k]=√{square root over (δx02+W2(k−k0)2δα2)}
The optimization target consists in maximization of the total flight length with respect to ΔD and the phase distribution of the ion beam, the optimum being subject to following restrictions:
It is easy to see that the optimal position of the ion beam's gorge (the minimum spatial spread) δx0 is on the middle oscillation k0=K/2, which gives:
In the optimum case, the inequality turns to equality, and the optimal value of the angular spread to maximize the number of oscillations K is given by the equation dK=0
As an example, for a 1 mm wide (in Y) ion cloud at the ion injector, with reasonable inter-mirror distance and drift length given by Wand DL:
The value 0.025 eV is the (thermal) energy spread of the ions and 4000 eV is the ion acceleration voltage.
The total flight length is thereby given by:
L=K(opt)W=32.5×1000 mm=32.5 m
It can be seen in the example that the spatial spread on the first oscillation δx[0] and the spatial spread after the last oscillation δx[K] have a value 7.6 mm that is about √2 times the minimum spatial spread in the system δx0 5.45 mm. In general, the converging lens preferably focuses the ions such that the spatial spread of the ion beam in the drift direction Y has a maximum at the drift focusing lens (and preferably the ion detector) that is 1.2-1.6 times, more preferably 1.3-1.5 times, or about √2 times, the minimum spatial spread.
To provide an optimized system it follows that as the ion beam undergoes K oscillations between the ion mirrors from the ion injector to the ion detector, K preferably has a value within a range that is +/−50%, or +/−40%, or +/−30%, or +/−20%, or +/−10% around the above optimum value, K(opt) given by:
Similarly, the angular spread of the ion beam, δα, after focusing by the drift focusing arrangement is preferably within a range that is +/−50%, or +/−40%, or +/−30%, or +/−20%, or +/−10% around the above optimum value, δα(opt) given by:
In a further embodiment, as long as the ion beam remains reasonably well focused, it is possible to place a deflector or a deflector/drift focusing lens combo (such as described above), or some other beam direction control means at the distal (far) end of the mirrors from the end at which the ion injector is location, in order to reverse the ion beam's drift velocity. Herein such deflectors are referred to as end or reversing deflectors. This results in reflection of the ions back to the starting end of the mirrors, where a detector can be placed. This enables multiplication (e.g. doubling) of the ions' time-of-flight. It can also be possible in some embodiments to have a deflector in the mirrors at one side to reverse the beam again for multiplication of the ions' time-of-flight. Such end or reversing deflectors, preferably have a wide spatial acceptance and operate in an isochronous manner. Another consideration is that positioning the detector proximate to the ion injector introduces space restrictions. One workaround disclosed in U.S. Pat. No. 9,136,101 is to inject ions with a high injection angle to improve the clearance and then use a deflector located after the first reflection to reduce this injection angle. Another possible solution to the problem of space and injection angle is disclosed in U.S. Pat. No. 7,326,925 which uses sectors to carry out ion injection at a small angle and optionally extraction to a detector. Increasing the ion mirror spacing is another possible solution.
An embodiment of a system employing a reversing deflector at the distal end is shown in
The beam reversing deflector should preferably incorporate a mechanism to minimise time-of-flight aberration incurred across the width of the ion beam. Two methods to reduce this effect are now described.
The first method is the minimisation of the ion beam width via a focusing lens the turn before beam drift-reversal. A lens can be positioned so that ions pass through it prior to reaching the reversing deflector, preferably one reflection prior to reaching the reversing deflector. The voltage of the lens can be set so that the (relatively wide) ion beam is focused almost to a point within the reversing deflector, thereby minimising ToF aberrations. Thus, the lens preferably has a point focus within the reversing deflector. The ion beam can then diverge to its original width on the return path along the drift direction Y as it passes through such lens a second time, as shown in
The second method for minimising time-of-flight aberration associated with use of a reversing deflector comprises self-correction of the time-of-flight aberration via two passes through the reversing deflector, which has a focusing lens integrated or in close proximity (e.g. not separated from the deflector by a reflection). For example, a deflector, such as a prism deflector for example, operated at half the voltage required to completely reverse the ions in the drift direction Y (impart opposite drift direction velocity), will instead reduce the ions' drift velocity to zero. Thus, when the ions exit the deflector and reach the ion mirror for the next reflection they will be reflected back into the deflector whereupon the deflection acts to change the ions' drift velocity from zero to the reverse drift velocity and the reversal of the ion trajectory is thereby completed. If a focusing lens is incorporated into the deflector, such as a prism type deflector, for example as described earlier and shown in
The use of reversing deflectors to reverse the ion beam and double the flight path is known in prior art but these tend to harm resolution. The more isochronous deflection methods presented here are useful to limit the time-of-flight aberrations and preserve resolution. Both are relatively simple constructions. This problem is addressed in the prior art either by having the aberration cancelled out with mirror inclination working in combination with a deflector (U.S. Pat. No. 9,136,101), which is mechanically demanding), or by having the ion beam always compressed with periodic lenses so the aberration on deflection is small (GB2403063) but this suffers from relatively poor space charge performance.
In patent application US 2018-0138026 A1 is described the use of curvature of the mirror electrodes along at least a portion of the drift length of the analyser as a means of controlling the drift velocity and thus maximising the number of reflections within the limited space of the analyser.
Multi-reflection mass spectrometers of the present invention may be combined with a point ion source such as laser ablation, MALDI etc for imaging applications, where each mass spectrum corresponds to a source point and images are built up over many points and corresponding mass spectra. Thus, in some embodiments, ions may be produced from a plurality of spatially separate points on a sample in an ion source in sequence and from each point a mass spectrum recorded in order to image the sample. Referring to the system shown in
The embodiments presented above could be also implemented not only as ultra-high resolution ToF instruments but also as low-cost mid-performance analysers. For example, if the ion energy and thus the voltages applied do not exceed a few kilovolts, the entire assembly of mirrors and/or compensation electrodes could be implemented as a pair of printed-circuit boards (PCBs) arranged with their printed surfaces parallel to and facing each other, preferably flat and made of FR4 glass-filled epoxy or ceramics, spaced apart by metal spacers and aligned by dowels. PCBs may be glued or otherwise affixed to more resilient material (metal, glass, ceramics, polymer), thus making the system more rigid. Preferably, electrodes on each PCB may be defined by laser-cut grooves that provide sufficient isolation against breakdown, whilst at the same time not significantly exposing the dielectric inside. Electrical connections may be implemented via the rear surface which does not face the ion beam and may also integrate resistive voltage dividers or entire power supplies.
For practical implementations the elongation of the mirrors in the drift direction Y should not be too long in order to reduce the complexity and cost of the design. Preferably means are provided for compensating the fringing fields, for example using end electrodes (preferably located at the distance of at least 2-3 times the height of mirror in Z-direction from the closest ion trajectory) or end-PCBs which mimic the potential distribution of infinitely elongated mirrors. In the former case, electrodes could use the same voltages as the mirror electrodes and might be implemented as flat plates of appropriate shape and attached to the mirror electrodes.
The spectrometer according to the invention in some embodiments may be used as a high resolution mass selection device to select precursor ions of particular mass-to-charge ratio for fragmentation and MS2 analysis in a second mass spectrometer. For example, in the manner shown in FIG. 15 of U.S. Pat. No. 9,136,101.
As used herein, including in the claims, unless the context indicates otherwise, singular forms of the terms herein are to be construed as including the plural form and vice versa. For instance, unless the context indicates otherwise, a singular reference herein including in the claims, such as “a” or “an” means “one or more”.
Throughout the description and claims of this specification, the words “comprise”, “including”, “having” and “contain” and variations of the words, for example “comprising” and “comprises” etc, mean “including but not limited to” and are not intended to (and do not) exclude other components.
It will be appreciated that variations to the foregoing embodiments of the invention can be made while still falling within the scope of the invention as defined by the claims. Each feature disclosed in this specification, unless stated otherwise, may be replaced by alternative features serving the same, equivalent or similar purpose. Thus, unless stated otherwise, each feature disclosed is one example only of a generic series of equivalent or similar features.
The use of any and all examples, or exemplary language (“for instance”, “such as”, “for example” and like language) provided herein, is intended merely to better illustrate the invention and does not indicate a limitation on the scope of the invention unless otherwise claimed. No language in the specification should be construed as indicating any non-claimed element as essential to the practice of the invention.
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