Claims
- 1. A fusion protein comprising a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence of SEQ ID NO:1;
- wherein
- Xaa at position 17 is Ser, Lys, Gly, Asp, Met, Gln or Arg;
- Xaa at position 18 is Asn, His, Leu, Ile, Phe, Arg or Gln;
- Xaa at position 19 is Met, Phe, Ile, Arg, Gly, Ala or Cys;
- Xaa at position 20 is Ile, Cys, Gln, Glu, Arg, Pro or Ala;
- Xaa at position 21 is Asp, Phe, Lys, Arg, Ala, Gly, Glu, Gln, Asn, Thr, Ser or Val;
- Xaa at position 22 is Glu, Trp, Pro, Ser, Ala, His, Asp, Asn, Gin, Leu, Val or Gly;
- Xaa at position 23 is Ile, Val, Ala, Leu, Gly, Trp, Lys, Phe, Ser or Arg;
- Xaa at position 24 is Ile, Gly, Val, Arg, Ser, Phe or Leu;
- Xaa at position 25 is Thr, His, Gly, Gln, Arg, Pro or Ala;
- Xaa at position 26 is His, Thr, Phe, Gly, Arg, Ala or Trp;
- Xaa at position 27 is Leu, Gly, Arg, Thr, Ser or Ala;
- Xaa at position 28 is Lys, Arg, Leu, Gln, Gly, Pro, Val or Trp;
- Xaa at position 29 is Gln, Asn, Leu, Pro, Arg or Val;
- Xaa at position 30 is Pro, His, Thr, Gly, Asp, Gln, Ser, Leu or Lys;
- Xaa at position 31 is Pro, Asp, Gly, Ala, Arg, Leu or Gln;
- Xaa at position 32 is Leu, Val, Arg, Gln, Asn, Gly, Ala or Glu;
- Xaa at position 33 is Pro, Leu, Gln, Ala, Thr or Glu;
- Xaa at position 34 is Leu, Val, Gly, Ser, Lys, Glu, Gln, Thr, Arg, Ala, Phe, Ile or Met;
- Xaa at position 35 is Leu, Ala, Gly, Asn, Pro, Gln or Val;
- Xaa at position 36 is Asp, Leu or Val;
- Xaa at position 37 is Phe, Ser, Pro, Trp or Ile;
- Xaa at position 38 is Asn or Ala;
- Xaa at position 40 is Leu, Trp or Arg;
- Xaa at position 41 is Asn, Cys, Arg, Leu, His, Met or Pro;
- Xaa at position 42 is Gly, Asp, Ser, Cys, Asn, Lys, Thr, Leu, Val, Glu, Phe, Tyr, Ile, Met or Ala;
- Xaa at position 43 is Glu, Asn, Tyr, Leu, Phe, Asp, Ala, Cys, Gln, Arg, Thr, Gly or Ser;
- Xaa at position 44 is Asp, Ser, Leu, Arg, Lys, Thr, Met, Trp, Glu, Asn, Gln, Ala or Pro;
- Xaa at position 45 is Gln, Pro, Phe, Val, Met, Leu, Thr, Lys, Trp, Asp, Asn, Arg, Ser, Ala, Ile, Glu or His;
- Xaa at position 46 is Asp, Phe, Ser, Thr, Cys, Glu, Asn, Gln, Lys, His, Ala, Tyr, Ile, Val or Gly;
- Xaa at position 47 is Ile, Gly, Val, Ser, Arg, Pro or His;
- Xaa at position 48 is Leu, Ser, Cys, Arg, Ile, His, Phe, Glu, Lys, Thr, Ala, Met, Val or Asn;
- Xaa at position 49 is Met, Arg, Ala, Gly, Pro, Asn, His or Asp;
- Xaa at position 50 is Glu, Leu, Thr, Asp, Tyr, Lys, Asn, Ser, Ala, Ile, Val, His, Phe, Met or Gln;
- Xaa at position 51 is Asn, Arg, Met, Pro, Ser, Thr or His;
- Xaa at position 52 is Asn, His, Arg, Leu, Gly, Ser or Thr;
- Xaa at position 53 is Leu, Thr, Ala, Gly, Glu, Pro, Lys, Ser or Met;
- Xaa at position 54 is Arg, Asp, Ile, Ser, Val, Thr, Gln, Asn, Lys, His, Ala or Leu;
- Xaa at position 55 is Arg, Thr, Val, Ser, Leu or Gly;
- Xaa at position 56 is Pro, Gly, Cys, Ser, Gln, Glu, Arg, His, Thr, Ala, Tyr, Phe, Leu, Val or Lys;
- Xaa at position 57 is Asn or Gly;
- Xaa at position 58 is Leu, Ser, Asp, Arg, Gln, Val or Cys;
- Xaa at position 59 is Glu Tyr, His, Leu, Pro or Arg;
- Xaa at position 60 is Ala, Ser, Pro, Tyr, Asn or Thr;
- Xaa at position 61 is Phe, Asn, Glu, Pro, Lys, Arg or Ser;
- Xaa at position 62 is Asn, His, Val, Arg, Pro, Thr, Asp or Ile;
- Xaa at position 63 is Arg, Tyr, Trp, Ser, Pro or Val;
- Xaa at position 64 is Ala, Asn, Pro, Ser or Lys;
- Xaa at position 65 is Val, Thr, Pro, His, Leu, Phe or Ser;
- Xaa at position 66 is Lys, Ile, Arg, Val, Asn, Glu or Ser;
- Xaa at position 67 is Ser, Ala, Phe, Val, Gly, Asn, Ile, Pro or His;
- Xaa at position 68 is Leu, Val, Trp, Ser, Ile, Phe, Thr or His;
- Xaa at position 69 is Gln, Ala, Pro, Thr, Glu, Arg, Trp, Gly or Leu;
- Xaa at position 70 is Asn, Leu, Val, Trp, Pro or Ala;
- Xaa at position 71 is Ala, Met, Leu, Pro, Arg, Glu, Thr, Gln, Trp or Asn;
- Xaa at position 72 is Ser, Glu, Met, Ala, His, Asn, Arg or Asp;
- Xaa at position 73 is Ala, Glu, Asp, Leu, Ser, Gly, Thr or Arg;
- Xaa at position 74 is Ile, Met, Thr, Pro, Arg, Gly, Ala;
- Xaa at position 75 is Glu, Lys, Gly, Asp, Pro, Trp, Arg, Ser, Gln or Leu;
- Xaa at position 76 is Ser, Val, Ala, Asn, Trp, Glu, Pro, Gly or Asp;
- Xaa at position 77 is Ile, Ser, Arg, Thr or Leu;
- Xaa at position 78 is Leu, Ala, Ser, Glu, Phe, Gly or Arg;
- Xaa at position 79 is Lys, Thr, Asn, Met, Arg, Ile, Gly or Asp;
- Xaa at position 80 is Asn, Trp, Val, Gly, Thr, Leu, Glu or Arg;
- Xaa at position 81 is Leu, Gln, Gly, Ala, Trp, Arg, Val or Lys;
- Xaa at position 82 is Leu, Gln, Lys, Trp, Arg, Asp, Glu, Asn, His, Thr, Ser, Ala, Tyr, Phe, Ile, Met or Val;
- Xaa at position 83 is Pro, Ala, Thr, Trp, Arg or Met;
- Xaa at position 84 is Cys, Glu, Gly, Arg, Met or Val;
- Xaa at position 85 is Leu, Asn, Val or Gln;
- Xaa at position 86 is Pro, Cys, Arg, Ala or Lys;
- Xaa at position 87 is Leu, Ser, Trp or Gly;
- Xaa at position 88 is Ala, Lys, Arg, Val or Trp;
- Xaa at position 89 is Thr, Asp, Cys, Leu, Val, Glu, His, Asn or Ser;
- Xaa at position 90 is Ala, Pro, Ser, Thr, Gly, Asp, Ile or Met;
- Xaa at position 91 is Ala, Pro, Ser, Thr, Phe, Leu, Asp or His;
- Xaa at position 92 is Pro, Phe, Arg, Ser, Lys, His, Ala, Gly, Ile or Leu;
- Xaa at position 93 is Thr, Asp, Ser, Asn, Pro, Ala, Leu or Arg;
- Xaa at position 94 is Arg, Ile, Ser, Glu, Leu, Val, Gln, Lys, His, Ala or Pro;
- Xaa at position 95 is His, Gln, Pro, Val, Leu, Gly, Thr, Asn, Ser, Ala, Trp, Phe, Ile or Tyr;
- Xaa at position 96 is Pro, Lys, Tyr, Gly, Ile or Thr;
- Xaa at position 97 is Ile, Val, Lys, Ala or Asn;
- Xaa at position 98 is His, Ile, Asn, Leu, Asp, Ala, Thr, Glu, Gln, Ser, Phe, Met, Val, Lys, Arg, Tyr or Pro;
- Xaa at position 99 is Ile, Leu, Arg, Asp, Val, Pro, Gln, Gly, Ser, Phe or His;
- Xaa at position 100 is Lys, Tyr, Leu, His, Arg, Ile, Ser, Gln or Pro;
- Xaa at position 101 is Asp;
- Xaa at position 102 is Gly, Leu, Glu, Lys, Ser, Tyr or Pro;
- Xaa at position 103 is Asp or Ser;
- Xaa at position 104 is Trp, Val, Cys, Tyr, Thr, Met, Pro, Leu, Gln, Lys, Ala, Phe or Gly;
- Xaa at position 105 is Asn, Pro, Ala, Phe, Ser, Trp, Gln, Tyr, Leu, Lys, Ile, Asp or His;
- Xaa at position 106 is Glu, Ser, Ala, Lys, Thr, Ile, Gly or Pro;
- Xaa at position 108 is Arg, Lys, Asp, Leu, Thr, Ile, Gln, His, Ser, Ala or Pro;
- Xaa at position 109 is Arg, Thr, Pro, Glu, Tyr, Leu, Ser or Gly;
- Xaa at position 110 is Lys, Ala, Asn, Thr, Leu, Arg, Gln, His, Glu, Ser or Trp;
- Xaa at position 111 is Leu, Ile, Arg, Asp or Met;
- Xaa at position 112 is Thr, Val, Gln, Tyr, Glu, or Phe;
- Xaa at position 113 is Phe, Ser, Cys, His, Gly, Trp, Tyr, Asp, Lys, Leu, Ile, Val or Asn;
- Xaa at position 114 is Tyr, Cys, His, Ser, Trp, Arg or Leu;
- Xaa at position 115 is Leu, Asn, Val, Pro, Arg, Ala, His, Thr, Trp or Met;
- Xaa at position 116 is Lys;
- Xaa at position 117 is Thr, Ser, Asn, Ile, Trp, Lys or Pro;
- Xaa at position 118 is Leu, Ser, Pro, Ala, Glu, Cys, Asp or Tyr;
- Xaa at position 119 is Glu, Ser, Lys, Pro, Leu, Thr, Tyr or Arg;
- Xaa at position 120 is Asn, Ala, Pro, Leu, His, Val or Gln;
- Xaa at position 121 is Ala, Ser, Ile, Asn, Pro, Lys or Asp;
- Xaa at position 122 is Gln, Ser, Met, Trp, Arg, Phe, Pro, His, Ile, Tyr or Cys;
- Xaa at position 123 is Ala, Met, Glu, His, Ser, Pro, Tyr or Leu;
- wherein from 1 to 14 amino acids are optionally deleted from the N-terminus and/or from 1 to 15 amino acids are optionally deleted from the C-terminus; wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding amino acids of native (1-133) human interleukin-3;
- and wherein a polypeptide having only the sequence of said mutant human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 2. The fusion protein of claim 1 wherein said factor is selected from the group consisting of: GM-CSF, CSF-1, G-CSF, G-CSF Ser.sup.17, M-CSF, erythropoietin (EPO), IL-1, IL-4, IL-2, IL-3, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-11, IL-12, IL-13, LIF, human growth hormone, B-cell growth factor, B-cell differentiation factor, eosinophil differentiation factor and stem cell factor (SCF).
- 3. The fusion protein of claim 1 wherein R.sub.1 is a mutant human interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence of SEQ ID NO:3;
- wherein
- Xaa at position 17 is Ser, Gly, Asp or Gln;
- Xaa at position 18 is Asn, His or Ile;
- Xaa at position 23 is Ile, Ala, Leu or Gly;
- Xaa at position 25 is Thr, His or Gln;
- Xaa at position 26 is His or Ala;
- Xaa at position 29 is Gln or Asn;
- Xaa at position 30 is Pro or Gly;
- Xaa at position 32 is Leu, Arg, Asn or Ala;
- Xaa at position 34 is Leu, Val, Ser, Ala, Arg, Gln, Glu, Ile, Phe, Thr or Met;
- Xaa at position 35 is Leu, Ala, Asn or Pro;
- Xaa at position 38 is Asn or Ala;
- Xaa at position 42 is Gly, Asp, Ser, Ala, Asn, Ile, Leu, Met, Tyr or Arg;
- Xaa at position 45 is Gln, Val, Met, Leu, Ala, Asn, Glu or Lys;
- Xaa at position 46 is Asp, Phe, Ser, Gln, Glu, His, Val or Thr;
- Xaa at position 50 is Glu Asn, Ser or Asp;
- Xaa at position 51 is Asn, Arg, Pro, Thr or His;
- Xaa at position 55 is Arg, Leu or Gly;
- Xaa at position 56 is Pro, Gly, Ser, Ala, Asn, Val, Leu or Gln;
- Xaa at position 62 is Asn, Pro or Thr;
- Xaa at position 64 is Ala or Asn;
- Xaa at position 65 is Val or Thr;
- Xaa at position 67 is Ser or Phe;
- Xaa at position 68 is Leu or Phe;
- Xaa at position 69 is Gln, Ala, Glu or Arg;
- Xaa at position 76 is Ser, Val, Asn, Pro or Gly;
- Xaa at position 77 is Ile or Leu;
- Xaa at position 79 is Lys, Asn, Met, Arg, Ile or Gly;
- Xaa at position 80 is Asn, Gly, Glu or Arg;
- Xaa at position 82 is Leu, Gln, Trp, Arg, Asp, Asn, Glu, His, Met, Phe, Ser, Thr, Tyr or Val;
- Xaa at position 87 is Leu or Ser;
- Xaa at position 88 is Ala or Trp;
- Xaa at position 91 is Ala or Pro;
- Xaa at position 93 is Thr, Asp or Ala;
- Xaa at position 95 is His, Pro, Val, Gly, Asn, Ser or Thr;
- Xaa at position 98 is His, Ile, Asn, Ala, Thr, Gln, Glu, Lys, Met, Ser, Tyr, Val or Leu;
- Xaa at position 99 is Ile or Leu;
- Xaa at position 100 is Lys or Arg;
- Xaa at position 101 is Asp;
- Xaa at position 105 is Asn, Pro, Ser, Ile or Asp;
- Xaa at position 108 is Arg, Ala or Ser;
- Xaa at position 109 is Arg, Thr, Glu, Leu or Ser;
- Xaa at position 112 is Thr or Gln;
- Xaa at position 116 is Lys;
- Xaa at position 120 is Asn, Pro, Leu, His, Val or Gln;
- Xaa at position 121 is Ala, Ser, Ile, Pro or Asp;
- Xaa at position 122 is Gln, Met, Trp, Phe, Pro, His, Ile or Tyr;
- Xaa at position 123 is Ala, Met, Glu, Ser or Leu;
- wherein from 1 to 14 amino acids are optionally deleted from the N-terminus and/or from 1 to 15 amino acids are optionally deleted from the C-terminus; wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding amino acids of native (1-133)human interleukin-3;
- and wherein a polypeptide having only the sequence of said mutant human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay.
- 4. A fusion protein comprising a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence of SEQ ID NO:4;
- wherein
- Xaa at position 3 is Ser, Lys, Gly, Asp, Met, Gln or Arg;
- Xaa at position 4 is Asn, His, Leu, Ile, Phe, Arg or Gln;
- Xaa at position 5 is Met, Phe, Ile, Arg, Gly, Ala or Cys;
- Xaa at position 6 is Ile, Cys, Gln, Glu, Arg, Pro or Ala;
- Xaa at position 7 is Asp, Phe, Lys, Arg, Ala, Gly, Glu, Gln, Asn, Thr, Ser or Val;
- Xaa at position 8 is Glu, Trp, Pro, Ser, Ala, His, Asp, Asn, Gln, Leu, Val or Gly;
- Xaa at position 9 is Ile, Val, Ala, Leu, Gly, Trp, Lys, Phe, Ser, or Arg;
- Xaa at position 10 is Ile, Gly, Val, Arg, Ser, Phe or Leu;
- Xaa at position 11 is Thr, His, Gly, Gln, Arg, Pro or Ala;
- Xaa at position 12 is His, Thr, Phe, Gly, Arg, Ala or Trp;
- Xaa at position 13 is Leu, Gly, Arg, Thr, Ser or Ala;
- Xaa at position 14 is Lys, Arg, Leu, Gln, Gly, Pro, Val or Trp;
- Xaa at position 15 is Gln, Asn, Leu, Pro, Arg or Val;
- Xaa at position 16 is Pro, His, Thr, Gly, Asp, Gln, Ser, Leu or Lys;
- Xaa at position 17 is Pro, Asp, Gly, Ala, Arg, Leu or Gln;
- Xaa at position 18 is Leu, Val, Arg, Gln, Asn, Gly, Ala or Glu;
- Xaa at position 19 is Pro, Leu, Gln, Ala, Thr or Glu;
- Xaa at position 20 is Leu, Val, Gly, Ser, Lys, Glu, Gln, Thr, Arg, Ala, Phe, Ile or Met;
- Xaa at position 21 is Leu, Ala, Gly, Asn, Pro, Gln or Val;
- Xaa at position 22 is Asp, Leu or Val;
- Xaa at position 23 is Phe, Ser, Pro, Trp or Ile;
- Xaa at position 24 is Asn or Ala;
- Xaa at position 26 is Leu, Trp or Arg;
- Xaa at position 27 is Asn, Cys, Arg, Leu, His, Met, Pro;
- Xaa at position 28 is Gly, Asp, Ser, Cys, Ala, Lys, Asn, Thr, Leu, Val, Glu, Phe, Tyr, Ile or Met;
- Xaa at position 29 is Glu, Asn, Tyr, Leu, Phe, Asp, Ala, Cys, Gln, Arg, Thr, Gly or Ser;
- Xaa at position 30 is Asp, Ser, Leu, Arg, Lys, Thr, Met, Trp, Glu, Asn, Gln, Ala or Pro;
- Xaa at position 31 is Gln, Pro, Phe, Val, Met, Leu, Thr, Lys, Asp, Asn, Arg, Ser, Ala, Ile, Glu, His or Trp;
- Xaa at position 32 is Asp, Phe, Ser, Thr, Cys, Glu, Asn, Gln, Lys, His, Ala, Tyr, Ile, Val or Gly;
- Xaa at position 33 is Ile, Gly, Val, Ser, Arg, Pro or His;
- Xaa at position 34 is Leu, Ser, Cys, Arg, Ile, His, Phe, Glu, Lys, Thr, Ala, Met, Val or Asn;
- Xaa at position 35 is Met, Arg, Ala, Gly, Pro, Asn, His or Asp;
- Xaa at position 36 is Glu, Leu, Thr, Asp, Tyr, Lys, Asn, Ser, Ala, Ile, Val, His, Phe, Met or Gln;
- Xaa at position 37 is Asn, Arg, Met, Pro, Ser, Thr or His;
- Xaa at position 38 is Asn, His, Arg, Leu, Gly, Ser or Thr;
- Xaa at position 39 is Leu, Thr, Ala, Gly, Glu, Pro, Lys, Ser or Met;
- Xaa at position 40 is Arg, Asp, Ile, Ser, Val, Thr, Gln, Asn, Lys, His, Ala or Leu;
- Xaa at position 41 is Arg, Thr, Val, Ser, Leu or Gly;
- Xaa at position 42 is Pro, Gly, Cys, Ser, Gln, Glu, Arg, His, Thr, Ala, Tyr, Phe, Leu, Val or Lys;
- Xaa at position 43 is Asn or Gly;
- Xaa at position 44 is Leu, Ser, Asp, Arg, Gln, Val or Cys;
- Xaa at position 45 is Glu Tyr, His, Leu, Pro or Arg;
- Xaa at position 46 is Ala, Ser, Pro, Tyr, Asn or Thr;
- Xaa at position 47 is Phe, Asn, Glu, Pro, Lys, Arg or Ser;
- Xaa at position 48 is Asn, His, Val, Arg, Pro, Thr, Asp or Ile;
- Xaa at position 49 is Arg, Tyr, Trp, Ser, Pro or Val;
- Xaa at position 50 is Ala, Asn, Pro, Ser or Lys;
- Xaa at position 51 is Val, Thr, Pro, His, Leu, Phe or Ser;
- Xaa at position 52 is Lys, Ile, Arg, Val, Asn, Glu or Ser;
- Xaa at position 53 is Ser, Ala, Phe, Val, Gly, Asn, Ile, Pro or His;
- Xaa at position 54 is Leu, Val, Trp, Ser, Ile, Phe, Thr or His;
- Xaa at position 55 is Gln, Ala, Pro, Thr, Glu, Arg, Trp, Gly or Leu;
- Xaa at position 56 is Asn, Leu, Val, Trp, Pro or Ala;
- Xaa at position 57 is Ala, Met, Leu, Pro, Arg, Glu, Thr, Gln, Trp or Asn;
- Xaa at position 58 is Ser, Glu, Met, Ala, His, Asn, Arg or Asp;
- Xaa at position 59 is Ala, Glu, Asp, Leu, Ser, Gly, Thr or Arg;
- Xaa at position 60 is Ile, Met, Thr, Pro, Arg, Gly, Ala;
- Xaa at position 61 is Glu, Lys, Gly, Asp, Pro, Trp, Arg, Ser, Gln or Leu;
- Xaa at position 62 is Ser, Val, Ala, Asn, Trp, Glu, Pro, Gly or Asp;
- Xaa at position 63 is Ile, Ser, Arg, Thr or Leu;
- Xaa at position 64 is Leu, Ala, Ser, Glu, Phe, Gly or Arg;
- Xaa at position 65 is Lys, Thr, Gly, Asn, Met, Arg, Ile or Asp;
- Xaa at position 66 is Asn, Trp, Val, Gly, Thr, Leu, Glu or Arg;
- Xaa at position 67 is Leu, Gln, Gly, Ala, Trp, Arg, Val or Lys;
- Xaa at position 68 is Leu, Gln, Lys, Trp, Arg, Asp, Glu, Asn, His, Thr, Ser, Ala, Tyr, Phe, Ile, Met or Val;
- Xaa at position 69 is Pro, Ala, Thr, Trp, Arg or Met;
- Xaa at position 70 is Cys, Glu, Gly, Arg, Met or Val;
- Xaa at position 71 is Leu, Asn, Val or Gln;
- Xaa at position 72 is Pro, Cys, Arg, Ala or Lys;
- Xaa at position 73 is Leu, Ser, Trp or Gly;
- Xaa at position 74 is Ala, Lys, Arg, Val or Trp;
- Xaa at position 75 is Thr, Asp, Cys, Leu, Val, Glu, His, Asn or Ser;
- Xaa at position 76 is Ala, Pro, Ser, Thr, Gly, Asp, Ile or Met;
- Xaa at position 77 is Ala, Pro, Ser, Thr, Phe, Leu, Asp or His;
- Xaa at position 78 is Pro, Phe, Arg, Ser, Lys, His, Ala, Gly, Ile or Leu;
- Xaa at position 79 is Thr, Asp, Ser, Asn, Pro, Ala, Leu or Arg;
- Xaa at position 80 is Arg, Ile, Ser, Glu, Leu, Val, Gln, Lys, His, Ala or Pro;
- Xaa at position 81 is His, Gln, Pro, Val, Leu, Gly, Thr, Asn, Ser, Ala, Trp, Phe, Ile or Tyr;
- Xaa at position 82 is Pro, Lys, Tyr, Gly, Ile or Thr;
- Xaa at position 83 is Ile, Val, Lys, Ala or Asn;
- Xaa at position 84 is His, Ile, Asn, Leu, Asp, Ala, Thr, Glu, Gln, Ser, Phe, Met, Val, Lys, Arg, Tyr or Pro;
- Xaa at position 85 is Ile, Leu, Arg, Asp, Val, Pro, Gln, Gly, Ser, Phe or His;
- Xaa at position 86 is Lys, Tyr, Leu, His, Arg, Ile, Ser, Gln or Pro;
- Xaa at position 87 is Asp;
- Xaa at position 88 is Gly, Leu, Glu, Lys, Ser, Tyr or Pro;
- Xaa at position 89 is Asp or Ser;
- Xaa at position 90 is Trp, Val, Cys, Tyr, Thr, Met, Pro, Leu, Gln, Lys, Ala, Phe or Gly;
- Xaa at position 91 is Asn, Pro, Ala, Phe, Ser, Trp, Gln, Tyr, Leu, Lys, Ile, Asp or His;
- Xaa at position 92 is Glu, Ser, Ala, Lys, Thr, Ile, Gly, or Pro;
- Xaa at position 94 is Arg, Lys, Asp, Leu, Thr, Ile, Gln, His, Ser, Ala or Pro;
- Xaa at position 95 is Arg, Thr, Pro, Glu, Tyr, Leu, Ser, or Gly;
- Xaa at position 96 is Lys, Asn, Thr, Leu, Gln, Arg, His, Glu, Ser, Ala or Trp;
- Xaa at position 97 is Leu, Ile, Arg, Asp or Met;
- Xaa at position 98 is Thr, Val, Gln, Tyr, Glu, or Phe;
- Xaa at position 99 is Phe, Ser, Cys, His, Gly, Trp, Tyr, Asp, Lys, Leu, Ile, Val or Asn;
- Xaa at position 100 is Tyr, Cys, His, Ser, Trp, Arg or Leu;
- Xaa at position 101 is Leu, Asn, Val, Pro, Arg, Ala, His, Thr, Trp or Met;
- Xaa at position 102 is Lys;
- Xaa at position 103 is Thr, Ser, Asn, Ile, Trp, Lys or Pro;
- Xaa at position 104 is Leu, Ser, Pro, Ala, Glu, Cys, Asp, or Tyr;
- Xaa at position 105 is Glu, Ser, Lys, Pro, Leu, Thr, Tyr, or Arg;
- Xaa at position 106 is Asn, Ala, Pro, Leu, His, Val or Gln;
- Xaa at position 107 is Ala, Ser, Ile, Asn, Pro, Lys or Asp;
- Xaa at position 108 is Gln, Ser, Met, Trp, Arg, Phe, Pro, His, Ile, Tyr or Cys;
- Xaa at position 109 is Ala, Met, Glu, His, Ser, Pro, Tyr, or Leu;
- wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding native amino acids of (1-133) human interleukin-3; and a polypeptide having only the sequence of said mutant (15-125) human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 5. The fusion protein of claim 4 wherein said factor is selected from the group consisting of: GM-CSF, CSF-1, G-CSF, G-CSF Ser.sup.17, M-CSF, erythropoietin (EPO), IL-1, IL-4, IL-2, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-11, IL-12, IL-13, LIF, human growth hormone, B-cell growth factor, B-cell differentiation factor, eosinophil differentiation factor and stem cell factor (SCF).
- 6. The fusion protein of claim 4 wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence of SEQ ID NO:6;
- wherein
- Xaa at position 3 is Ser, Gly, Asp or Gln;
- Xaa at position 4 is Asn, His or Ile;
- Xaa at position 9 is Ile, Ala, Leu or Gly;
- Xaa at position 11 is Thr, His or Gln;
- Xaa at position 12 is His or Ala;
- Xaa at position 15 is Gln or Asn;
- Xaa at position 16 is Pro or Gly;
- Xaa at position 18 is Leu, Arg, Asn or Ala;
- Xaa at position 20 is Leu, Val, Ser, Ala, Arg, Gln, Glu, Ile, Phe, Thr or Met;
- Xaa at position 21 is Leu, Ala, Asn or Pro;
- Xaa at position 24 is Asn or Ala;
- Xaa at position 28 is Gly, Asp, Ser, Ala, Asn, Ile, Leu, Met, Tyr or Arg;
- Xaa at position 31 is Gln, Val, Met, Leu, Ala, Asn, Glu or Lys;
- Xaa at position 32 is Asp, Phe, Ser, Ala, Gln, Glu, His, Val or Thr;
- Xaa at position 36 is Glu, Asn, Ser or Asp;
- Xaa at position 37 is Asn, Arg, Pro, Thr or His;
- Xaa at position 41 is Arg, Leu or Gly;
- Xaa at position 42 is Pro, Gly, Ser, Ala, Asn, Val, Leu or Gln;
- Xaa at position 48 is Asn, Pro or Thr;
- Xaa at position 50 is Ala or Asn;
- Xaa at position 51 is Val or Thr;
- Xaa at position 53 is Ser or Phe;
- Xaa at position 54 is Leu or Phe;
- Xaa at position 55 is. Gln, Ala, Glu or Arg;
- Xaa at position 62 is Ser, Val, Asn, Pro or Gly;
- Xaa at position 63 is Ile or Leu;
- Xaa at position 65 is Lys, Asn, Met, Arg, Ile or Gly;
- Xaa at position 66 is Asn, Gly, Glu or Arg;
- Xaa at position 68 is Leu, Gln, Trp, Arg, Asp, Asn, Glu, His, Met, Phe, Ser, Thr, Tyr or Val;
- Xaa at position 73 is Leu or Ser;
- Xaa at position 74 is Ala or Trp;
- Xaa at position 77 is Ala or Pro;
- Xaa at position 79 is Thr, Asp or Ala;
- Xaa at position 81 is His, Pro, Val, Gly, Asn, Ser or Thr;
- Xaa at position 84 is His, Ile, Asn, Ala, Thr, Arg, Gln, Glu, Lys, Met, Ser, Tyr, Val or Leu;
- Xaa at position 85 is Ile or Leu;
- Xaa at position 86 is Lys or Arg;
- Xaa at position 87 is Asp;
- Xaa at position 91 is Asn, Pro, Ser, Ile or Asp;
- Xaa at position 94 is Arg, Ala or Ser;
- Xaa at position 95 is Arg, Thr, Glu, Leu or Ser;
- Xaa at position 98 is Thr or Gln;
- Xaa at position 102 is Lys;
- Xaa at position 106 is Asn, Pro, Leu, His, Val or Gln;
- Xaa at position 107 is Ala, Ser, Ile, Pro or Asp;
- Xaa at position 108 is Gln, Met, Trp, Phe, Pro, His, Ile, or Tyr;
- Xaa at position 109 is Ala, Met, Glu, Ser or Leu;
- wherein from 4 to about 26 of the amino acids designated by Xaa are different from the corresponding amino acids of native (1-133)human interleukin-3; and wherein a polypeptide having only the sequence of said mutant (15-125) human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay.
- 7. A fusion protein comprising a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant (15-125) human interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence of SEQ ID NO:8;
- wherein
- Xaa at position 4 is Asn or Ile;
- Xaa at position 5 is Met, Ala or Ile:
- Xaa at position 6 is Ile, Pro or Leu;
- Xaa at position 9 is Ile, Ala or Leu;
- Xaa at position 11 is Thr or His;
- Xaa at position 15 is Gln, Arg, Val or Ile;
- Xaa at position 18 is Leu, Ala, Asn or Arg;
- Xaa at position 20 is Leu or Ser;
- Xaa at position 23 is Phe, Pro or Ser;
- Xaa at position 24 is Asn or Ala;
- Xaa at position 28 is Gly, Ala, Ser, Asp or Asn;
- Xaa at position 31 is Gln, Val or Met;
- Xaa at position 32 is Asp or Ser;
- Xaa at position 35 is Met, Ile or Asp;
- Xaa at position 36 is Glu or Asp;
- Xaa at position 37 is Asn, Arg or Ser;
- Xaa at position 41 is Arg, Leu or Thr;
- Xaa at position 42 is Pro or Ser;
- Xaa at position 45 is Glu or Leu;
- Xaa at position 46 is Ala or Ser;
- Xaa at position 48 is Asn, Val or Pro;
- Xaa at position 49 is Arg or His;
- Xaa at position 51 is Val or Ser;
- Xaa at position 53 is Ser, Asn, His or Gln;
- Xaa at position 55 is Gln or Glu;
- Xaa at position 59 is Ala or Gly;
- Xaa at position 62 is Ser, Ala or Pro;
- Xaa at position 65 is Lys, Arg or Ser;
- Xaa at position 67 is Leu, Glu or Val;
- Xaa at position 68 is Leu, Glu, Val or Trp;
- Xaa at position 71 is Leu or Val;
- Xaa at position 73 is Leu, Ser or Tyr;
- Xaa at position 74 is Ala or Trp;
- Xaa at position 77 is Ala or Pro;
- Xaa at position 79 is Pro or Ser;
- Xaa at position 81 is His or Thr;
- Xaa at position 84 is His, Ile or Thr;
- Xaa at position 86 is Lys or Arg;
- Xaa at position 87 is Asp;
- Xaa at position 91 is Asn or Glu;
- Xaa at position 95 is Arg, Glu, Leu;
- Xaa at position 98 Thr or Gin;
- Xaa at position 102 is Lys;
- Xaa at position 103 is Thr or Ser;
- Xaa at position 106 is Asn, Gln or His;
- Xaa at position 109 is Ala or Glu;
- wherein from four to about forty-four of the amino acids designated by Xaa are different from the corresponding amino acids of native (15-125)human interleukin-3; and wherein a polypeptide having only the sequence of said mutant (15-125) human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 8. A fusion protein comprising a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence of SEQ ID NO 4; wherein
- Xaa at position 42 is Gly, Asp, Ser, Ile, Leu, Met, Tyr or Ala;
- Xaa at position 45 is Gln, Val, Met or Asn;
- Xaa at position 46 is Asp, Ser, Gln, His or Val;
- Xaa at position 50 is Glu or Asp;
- Xaa at position 51 is Asn, Pro or Thr;
- Xaa at position 62 is Asn or Pro;
- Xaa at position 76 is Ser or Pro;
- Xaa at position 82 is Leu, Trp, Asp, Asn Glu, His, Phe, Ser or Tyr;
- Xaa at position 95 is His, Arg, Thr, Asn or Ser;
- Xaa at position 98 is His, Ile, Leu, Ala, Gln, Lys, Met, Ser, Tyr or Val;
- Xaa at position 100 is Lys or Arg;
- Xaa at position 105 is Asn or Pro;
- Xaa at position 108 is Arg, Ala or Ser;
- Xaa at position 121 is Ala or Ile;
- Xaa at position 122 is Gln or Ile; and
- Xaa at position 123 is Ala, Met or Glu;
- wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding native amino acids of (1-133) human interleukin-3; and a polypeptide having only the sequence of said mutant (15-125) human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 9. A fusion protein comprising a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence selected from the group consisting of:
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:31;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:32;
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:33;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:34;
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:35;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 117S, 120H and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:36;
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 117S, 120H and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:37;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:38;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 117S, 120H and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:39;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 50D, 51R, 55L, 56S, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:40;
- (18I, 23A, 25H, 29R, 32A, 34S, 37P, 42D, 45M, 46S, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:41;
- (18I, 25H, 29R, 32A, 37P, 42D, 45M, 46S, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:42;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 50D, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:43;
- (18I, 25H, 29R, 32A, 37P, 42D, 45V, 46S, 50D, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:44;
- (18I, 25H, 29R, 32A, 37P, 42D, 45M, 46S, 50D, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:45;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 10. The fusion protein of claim 9 wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide comprising a modified hIL-3 amino acid sequence selected from the group consisting of:
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:31;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:32; and
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:33;
- R.sub.2 is G-CSF Ser.sup.17 ; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 11. The fusion protein of claim 1, 2, 3, 4, 5, 6, 7, 8 or 9 wherein said factor is selected from the group consisting of G-CSF, G-CSF Ser.sup.17 and GM-CSF.
- 12. The fusion protein of claim 1, 2, 3, 4, 5, 6, 7, or 8 wherein a polypeptide having only the sequence of said human interleukin-3 polypeptide R.sub.1 has at least five times greater activity than native human interleukin-3.
- 13. The fusion protein of claim 1, 2, 3, 4, 5, 6, 7, or 8 wherein a polypeptide having only the sequence of said human interleukin-3 polypeptide R.sub.1 has at least ten times greater activity than native human interleukin-3.
- 14. The fusion protein of claim 1, 2, 3, 4, 5, 6, 7, or 8 wherein a polypeptide having only the sequence of said human interleukin-3 polypeptide R.sub.1 has at least five times greater activity than native human interleukin-3.
- 15. The fusion protein of claim 1, 2, 3, 4, 5, 6, 7, or 8 wherein a polypeptide having only the sequence of said human interleukin-3 polypeptide R.sub.1 has at least ten times greater activity than native human interleukin-3.
- 16. A fusion protein consisting of a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human interleukin-3 polypeptide consisting of a modified hIL-3 amino acid sequence of SEQ ID NO:1;
- wherein
- Xaa at position 17 is Ser, Lys, Gly, Asp, Met, Gln or Arg;
- Xaa at position 18 is Asn, His, Leu, Ile, Phe, Arg or Gln;
- Xaa at position 19 is Met, Phe, Ile, Arg, Gly, Ala or Cys;
- Xaa at position 20 is Ile, Cys, Gln, Glu, Arg, Pro or Ala;
- Xaa at position 21 is Asp, Phe, Lys, Arg, Ala, Gly, Glu, Gln, Asn, Thr, Ser or Val;
- Xaa at position 22 is Glu, Trp, Pro, Ser, Ala, His, Asp, Asn, Gln, Leu, Val or Gly;
- Xaa at position 23 is Ile, Val, Ala, Leu, Gly, Trp, Lys, Phe, Ser or Arg;
- Xaa at position 24 is Ile, Gly, Val, Arg, Ser, Phe or Leu;
- Xaa at position 25 is Thr, His, Gly, Gln, Arg, Pro or Ala;
- Xaa at position 26 is His, Thr, Phe, Gly, Arg, Ala or Trp;
- Xaa at position 27 is Leu, Gly, Arg, Thr, Ser or Ala;
- Xaa at position 28 is Lys, Arg, Leu, Gln, Gly, Pro, Val or Trp;
- Xaa at position 29 is Gln, Asn, Leu, Pro, Arg or Val;
- Xaa at position 30 is Pro, His, Thr, Gly, Asp, Gln, Ser, Leu or Lys;
- Xaa at position 31 is Pro, Asp, Gly, Ala, Arg, Leu or Gln;
- Xaa at position 32 is Leu, Val, Arg, Gln, Asn, Gly, Ala or Glu;
- Xaa at position 33 is Pro, Leu, Gln, Ala, Thr or Glu;
- Xaa at position 34 is Leu, Val, Gly, Ser, Lys, Glu, Gln, Thr, Arg, Ala, Phe, Ile or Met;
- Xaa at position 35 is Leu, Ala, Gly, Asn, Pro, Gln or Val;
- Xaa at position 36 is Asp, Leu or Val;
- Xaa at position 37 is Phe, Ser, Pro, Trp or Ile;
- Xaa at position 38 is Asn or Ala;
- Xaa at position 40 is Leu, Trp or Arg;
- Xaa at position 41 is Asn, Cys, Arg, Leu, His, Met or Pro;
- Xaa at position 42 is Gly, Asp, Ser, Cys, Asn, Lys, Thr, Leu, Val, Glu, Phe, Tyr, Ile, Met or Ala;
- Xaa at position 43 is Glu, Asn, Tyr, Leu, Phe, Asp, Ala, Cys, Gln, Arg, Thr, Gly or Ser;
- Xaa at position 44 is Asp, Ser, Leu, Arg, Lys, Thr, Met, Trp, Glu, Asn, Gln, Ala or Pro;
- Xaa at position 45 is Gln, Pro, Phe, Val, Met, Leu, Thr, Lys, Trp, Asp, Asn, Arg, Ser, Ala, Ile, Glu or His;
- Xaa at position 46 is Asp, Phe, Ser, Thr, Cys, Glu, Asn, Gln, Lys, His, Ala, Tyr, Ile, Val or Gly;
- Xaa at position 47 is Ile, Gly, Val, Ser, Arg, Pro or His;
- Xaa at position 48 is Leu, Ser, Cys, Arg, Ile, His, Phe, Glu, Lys, Thr, Ala, Met, Val or Asn;
- Xaa at position 49 is Met, Arg, Ala, Gly, Pro, Asn, His or Asp;
- Xaa at position 50 is Glu, Leu, Thr, Asp, Tyr, Lys, Asn, Ser, Ala, Ile, Val, His, Phe, Met or Gln;
- Xaa at position 51 is Asn, Arg, Met, Pro, Ser, Thr or His;
- Xaa at position 52 is Asn, His, Arg, Leu, Gly, Ser or Thr;
- Xaa at position 53 is Leu, Thr, Ala, Gly, Glu, Pro, Lys, Ser or Met;
- Xaa at position 54 is Arg, Asp, Ile, Ser, Val, Thr, Gln, Asn, Lys, His, Ala or Leu;
- Xaa at position 55 is Arg, Thr, Val, Ser, Leu or Gly;
- Xaa at position 56 is Pro, Gly, Cys, Ser, Gln, Glu, Arg, His, Thr, Ala, Tyr, Phe, Leu, Val or Lys;
- Xaa at position 57 is Asn or Gly;
- Xaa at position 58 is Leu, Ser, Asp, Arg, Gln, Val or Cys;
- Xaa at position 59 is Glu Tyr, His, Leu, Pro or Arg;
- Xaa at position 60 is Ala, Ser, Pro, Tyr, Asn or Thr;
- Xaa at position 61 is Phe, Asn, Glu, Pro, Lys, Arg or Ser;
- Xaa at position 62 is Asn, His, Val, Arg, Pro, Thr, Asp or Ile;
- Xaa at position 63 is Arg, Tyr, Trp, Ser, Pro or Val;
- Xaa at position 64 is Ala, Asn, Pro, Ser or Lys;
- Xaa at position 65 is Val, Thr, Pro, His, Leu, Phe or Ser;
- Xaa at position 66 is Lys, Ile, Arg, Val, Asn, Glu or Ser;
- Xaa at position 67 is Ser, Ala, Phe, Val, Gly, Asn, Ile, Pro or His;
- Xaa at position 68 is Leu, Val, Trp, Ser, Ile, Phe, Thr or His;
- Xaa at position 69 is Gln, Ala, Pro, Thr, Glu, Arg, Trp, Gly or Leu;
- Xaa at position 70 is Asn, Leu, Val, Trp, Pro or Ala;
- Xaa at position 71 is Ala, Met, Leu, Pro, Arg, Glu, Thr, Gln, Trp or Asn;
- Xaa at position 72 is Ser, Glu, Met, Ala, His, Asn, Arg or Asp;
- Xaa at position 73 is Ala, Glu, Asp, Leu, Ser, Gly, Thr or Arg;
- Xaa at position 74 is Ile, Met, Thr, Pro, Arg, Gly, Ala;
- Xaa at position 75 is Glu, Lys, Gly, Asp, Pro, Trp, Arg, Ser, Gln or Leu;
- Xaa at position 76 is Ser, Val, Ala, Asn, Trp, Glu, Pro, Gly or Asp;
- Xaa at position 77 is Ile, Ser, Arg, Thr or Leu;
- Xaa at position 78 is Leu, Ala, Ser, Glu, Phe, Gly or Arg;
- Xaa at position 79 is Lys, Thr, Asn, Met, Arg, Ile, Gly or Asp;
- Xaa at position 80 is Asn, Trp, Val, Gly, Thr, Leu, Glu or Arg;
- Xaa at position 81 is Leu, Gln, Gly, Ala, Trp, Arg, Val or Lys;
- Xaa at position 82 is Leu, Gln, Lys, Trp, Arg, Asp, Glu, Asn, His, Thr, Ser, Ala, Tyr, Phe, Ile, Met or Val;
- Xaa at position 83 is Pro, Ala, Thr, Trp, Arg or Met;
- Xaa at position 84 is Cys, Glu, Gly, Arg, Met or Val;
- Xaa at position 85 is Leu, Asn, Val or Gln;
- Xaa at position 86 is Pro, Cys, Arg, Ala or Lys;
- Xaa at position 87 is Leu, Ser, Trp or Gly;
- Xaa at position 88 is Ala, Lys, Arg, Val or Trp;
- Xaa at position 89 is Thr, Asp, Cys, Leu, Val, Glu, His, Asn or Ser;
- Xaa at position 90 is Ala, Pro, Ser, Thr, Gly, Asp, Ile or Met;
- Xaa at position 91 is Ala, Pro, Ser, Thr, Phe, Leu, Asp or His;
- Xaa at position 92 is Pro, Phe, Arg, Ser, Lys, His, Ala, Gly, Ile or Leu;
- Xaa at position 93 is Thr, Asp, Ser, Asn, Pro, Ala, Leu or Arg;
- Xaa at position 94 is Arg, Ile, Ser, Glu, Leu, Val, Gln, Lys, His, Ala or Pro;
- Xaa at position 95 is His, Gln, Pro, Val, Leu, Gly, Thr, Asn, Ser, Ala, Trp, Phe, Ile or Tyr;
- Xaa at position 96 is Pro, Lys, Tyr, Gly, Ile or Thr;
- Xaa at position 97 is Ile, Val, Lys, Ala or Asn;
- Xaa at position 98 is His, Ile, Asn, Leu, Asp, Ala, Thr, Glu, Gln, Ser, Phe, Met, Val, Lys, Arg, Tyr or Pro;
- Xaa at position 99 is Ile, Leu, Arg, Asp, Val, Pro, Gln, Gly, Ser, Phe or His;
- Xaa at position 100 is Lys, Tyr, Leu, His, Arg, Ile, Ser, Gln or Pro;
- Xaa at position 101 is Asp;
- Xaa at position 102 is Gly, Leu, Glu, Lys, Ser, Tyr or Pro;
- Xaa at position 103 is Asp or Ser;
- Xaa at position 104 is Trp, Val, Cys, Tyr, Thr, Met, Pro, Leu, Gln, Lys, Ala, Phe or Gly;
- Xaa at position 105 is Asn, Pro, Ala, Phe, Ser, Trp, Gln, Tyr, Leu, Lys, Ile, Asp or His;
- Xaa at position 106 is Glu, Ser, Ala, Lys, Thr, Ile, Gly or Pro;
- Xaa at position 108 is Arg, Lys, Asp, Leu, Thr, Ile, Gln, His, Ser, Ala or Pro;
- Xaa at position 109 is Arg, Thr, Pro, Glu, Tyr, Leu, Ser or Gly;
- Xaa at position 110 is Lys, Ala, Asn, Thr, Leu, Arg, Gln, His, Glu, Ser or Trp;
- Xaa at position 111 is Leu, Ile, Arg, Asp or Met;
- Xaa at position 112 is Thr, Val, Gln, Tyr, Glu, or Phe;
- Xaa at position 113 is Phe, Ser, Cys, His, Gly, Trp, Tyr, Asp, Lys, Leu, Ile, Val or Asn;
- Xaa at position 114 is Tyr, Cys, His, Ser, Trp, Arg or Leu;
- Xaa at position 115 is Leu, Asn, Val, Pro, Arg, Ala, His, Thr, Trp or Met;
- Xaa at position 116 is Lys;
- Xaa at position 117 is Thr, Ser, Asn, Ile, Trp, Lys or Pro;
- Xaa at position 118 is Leu, Ser, Pro, Ala, Glu, Cys, Asp or Tyr;
- Xaa at position 119 is Glu, Ser, Lys, Pro, Leu, Thr, Tyr or Arg;
- Xaa at position 120 is Asn, Ala, Pro, Leu, His, Val or Gin;
- Xaa at position 121 is Ala, Ser, Ile, Asn, Pro, Lys or Asp;
- Xaa at position 122 is Gln, Ser, Met, Trp, Arg, Phe, Pro, His, Ile, Tyr or Cys;
- Xaa at position 123 is Ala, Met, Glu, His, Ser, Pro, Tyr or Leu;
- wherein from 1 to 14 amino acids are optionally deleted from the N-terminus and/or from 1 to 15 amino acids are optionally deleted from the C-terminus; wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding amino acids of native (1-133) human interleukin-3; and wherein a polypeptide having only the sequence of said mutant human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 17. The fusion protein of claim 16 wherein said factor is selected from the group consisting of: GM-CSF, CSF-1, G-CSF, G-CSF Ser.sup.17, M-CSF, erythropoietin (EPO), IL-1, IL-4, IL-2, IL-3, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-11, IL-12, IL-13, LIF, human growth hormone, B-cell growth factor, B-cell differentiation factor, eosinophil differentiation factor and stem cell factor (SCF).
- 18. A fusion protein consisting of a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide consisting of a modified hIL-3 amino acid sequence of SEQ ID NO:4;
- wherein
- Xaa at position 3 is Ser, Lys, Gly, Asp, Met, Gln or Arg;
- Xaa at position 4 is Asn, His, Leu, Ile, Phe, Arg or Gln;
- Xaa at position 5 is Met, Phe, Ile, Arg, Gly, Ala or Cys;
- Xaa at position 6 is Ile, Cys, Gln, Glu, Arg, Pro or Ala;
- Xaa at position 7 is Asp, Phe, Lys, Arg, Ala, Gly, Glu, Gln, Asn, Thr, Ser or Val;
- Xaa at position 8 is Glu, Trp, Pro, Ser, Ala, His, Asp, Asn, Gln, Leu, Val or Gly;
- Xaa at position 9 is Ile, Val, Ala, Leu, Gly, Trp, Lys, Phe, Ser, or Arg;
- Xaa at position 10 is Ile, Gly, Val, Arg, Ser, Phe or Leu;
- Xaa at position 11 is Thr, His, Gly, Gln, Arg, Pro or Ala;
- Xaa at position 12 is His, Thr, Phe, Gly, Arg, Ala or Trp;
- Xaa at position 13 is Leu, Gly, Arg, Thr, Ser or Ala;
- Xaa at position 14 is Lys, Arg, Leu, Gln, Gly, Pro, Val or Trp;
- Xaa at position 15 is Gln, Asn, Leu, Pro, Arg or Val;
- Xaa at position 16 is Pro, His, Thr, Gly, Asp, Gln, Ser, Leu or Lys;
- Xaa at position 17 is Pro, Asp, Gly, Ala, Arg, Leu or Gln;
- Xaa at position 18 is Leu, Val, Arg, Gln, Asn, Gly, Ala or Glu;
- Xaa at position 19 is Pro, Leu, Gln, Ala, Thr or Glu;
- Xaa at position 20 is Leu, Val, Gly, Ser, Lys, Glu, Gln, Thr, Arg, Ala, Phe, Ile or Met;
- Xaa at position 21 is Leu, Ala, Gly, Asn, Pro, Gln or Val;
- Xaa at position 22 is Asp, Leu or Val;
- Xaa at position 23 is Phe, Ser, Pro, Trp or Ile;
- Xaa at position 24 is Asn or Ala;
- Xaa at position 26 is Leu, Trp or Arg;
- Xaa at position 27 is Asn, Cys, Arg, Leu, His, Met, Pro;
- Xaa at position 28 is Gly, Asp, Ser, Cys, Ala, Lys, Asn, Thr, Leu, Val, Glu, Phe, Tyr, Ile or Met;
- Xaa at position 29 is Glu, Asn, Tyr, Leu, Phe, Asp, Ala, Cys, Gln, Arg, Thr, Gly or Ser;
- Xaa at position 30 is Asp, Ser, Leu, Arg, Lys, Thr, Met, Trp, Glu, Asn, Gln, Ala or Pro;
- Xaa at position 31 is Gln, Pro, Phe, Val, Met, Leu, Thr, Lys, Asp, Asn, Arg, Ser, Ala, Ile, Glu, His or Trp;
- Xaa at position 32 is Asp, Phe, Ser, Thr, Cys, Glu, Asn, Gln, Lys, His, Ala, Tyr, Ile, Val or Gly;
- Xaa at position 33 is Ile, Gly, Val, Ser, Arg, Pro or His;
- Xaa at position 34 is Leu, Ser, Cys, Arg, Ile, His, Phe, Glu, Lys, Thr, Ala, Met, Val or Asn;
- Xaa at position 35 is Met, Arg, Ala, Gly, Pro, Asn, His or Asp;
- Xaa at position 36 is Glu, Leu, Thr, Asp, Tyr, Lys, Asn, Ser, Ala, Ile, Val, His, Phe, Met or Gln;
- Xaa at position 37 is Asn, Arg, Met, Pro, Ser, Thr or His;
- Xaa at position 38 is Asn, His, Arg, Leu, Gly, Ser or Thr;
- Xaa at position 39 is Leu, Thr, Ala, Gly, Glu, Pro, Lys, Ser or Met;
- Xaa at position 40 is Arg, Asp, Ile, Ser, Val, Thr, Gln, Asn, Lys, His, Ala or Leu;
- Xaa at position 41 is Arg, Thr, Val, Ser, Leu or Gly;
- Xaa at position 42 is Pro, Gly, Cys, Ser, Gln, Glu, Arg, His, Thr, Ala, Tyr, Phe, Leu, Val or Lys;
- Xaa at position 43 is Asn or Gly;
- Xaa at position 44 is Leu, Ser, Asp, Arg, Gln, Val or Cys;
- Xaa at position 45 is Glu Tyr, His, Leu, Pro or Arg;
- Xaa at position 46 is Ala, Ser, Pro, Tyr, Asn or Thr;
- Xaa at position 47 is Phe, Asn, Glu, Pro, Lys, Arg or Ser;
- Xaa at position 48 is Asn, His, Val, Arg, Pro, Thr, Asp or Ile;
- Xaa at position 49 is Arg, Tyr, Trp, Ser, Pro or Val;
- Xaa at position 50 is Ala, Asn, Pro, Ser or Lys;
- Xaa at position 51 is Val, Thr, Pro, His, Leu, Phe or Ser;
- Xaa at position 52 is Lys, Ile, Arg, Val, Asn, Glu or Ser;
- Xaa at position 53 is Ser, Ala, Phe, Val, Gly, Asn, Ile, Pro or His;
- Xaa at position 54 is Leu, Val, Trp, Ser, Ile, Phe, Thr or His;
- Xaa at position 55 is Gln, Ala, Pro, Thr, Glu, Arg, Trp, Gly or Leu;
- Xaa at position 56 is Asn, Leu, Val, Trp, Pro or Ala;
- Xaa at position 57 is Ala, Met, Leu, Pro, Arg, Glu, Thr, Gln, Trp or Asn;
- Xaa at position 58 is Ser, Glu, Met, Ala, His, Asn, Arg or Asp;
- Xaa at position 59 is Ala, Glu, Asp, Leu, Ser, Gly, Thr or Arg;
- Xaa at position 60 is Ile, Met, Thr, Pro, Arg, Gly, Ala;
- Xaa at position 61 is Glu, Lys, Gly, Asp, Pro, Trp, Arg, Ser, Gln or Leu;
- Xaa at position 62 is Ser, Val, Ala, Asn, Trp, Glu, Pro, Gly or Asp;
- Xaa at position 63 is Ile, Ser, Arg, Thr or Leu;
- Xaa at position 64 is Leu, Ala, Ser, Glu, Phe, Gly or Arg;
- Xaa at position 65 is Lys, Thr, Gly, Asn, Met, Arg, Ile or Asp;
- Xaa at position 66 is Asn, Trp, Val, Gly, Thr, Leu, Glu or Arg;
- Xaa at position 67 is Leu, Gln, Gly, Ala, Trp, Arg, Val or Lys;
- Xaa at position 68 is Leu, Gln, Lys, Trp, Arg, Asp, Glu, Asn, His, Thr, Ser, Ala, Tyr, Phe, Ile, Met or Val;
- Xaa at position 69 is Pro, Ala, Thr, Trp, Arg or Met;
- Xaa at position 70 is Cys, Glu, Gly, Arg, Met or Val;
- Xaa at position 71 is Leu, Asn, Val or Gln;
- Xaa at position 72 is Pro, Cys, Arg, Ala or Lys;
- Xaa at position 73 is Leu, Ser, Trp or Gly;
- Xaa at position 74 is Ala, Lys, Arg, Val or Trp;
- Xaa at position 75 is Thr, Asp, Cys, Leu, Val, Glu, His, Asn or Ser;
- Xaa at position 76 is Ala, Pro, Ser, Thr, Gly, Asp, Ile or Met;
- Xaa at position 77 is Ala, Pro, Ser, Thr, Phe, Leu, Asp or His;
- Xaa at position 78 is Pro, Phe, Arg, Ser, Lys, His, Ala, Gly, Ile or Leu;
- Xaa at position 79 is Thr, Asp, Ser, Asn, Pro, Ala, Leu or Arg;
- Xaa at position 80 is Arg, Ile, Ser, Glu, Leu, Val, Gln, Lys, His, Ala or Pro;
- Xaa at position 81 is His, Gln, Pro, Val, Leu, Gly, Thr, Asn, Ser, Ala, Trp, Phe, Ile or Tyr;
- Xaa at position 82 is Pro, Lys, Tyr, Gly, Ile or Thr;
- Xaa at position 83 is Ile, Val, Lys, Ala or Asn;
- Xaa at position 84 is His, Ile, Asn, Leu, Asp, Ala, Thr, Glu, Gln, Ser, Phe, Met, Val, Lys, Arg, Tyr or Pro;
- Xaa at position 85 is Ile, Leu, Arg, Asp, Val, Pro, Gln, Gly, Ser, Phe or His;
- Xaa at position 86 is Lys, Tyr, Leu, His, Arg, Ile, Ser, Gln or Pro;
- Xaa at position 87 is Asp;
- Xaa at position 88 is Gly, Leu, Glu, Lys, Ser, Tyr or Pro;
- Xaa at position 89 is Asp or Ser;
- Xaa at position 90 is Trp, Val, Cys, Tyr, Thr, Met, Pro, Leu, Gln, Lys, Ala, Phe or Gly;
- Xaa at position 91 is Asn, Pro, Ala, Phe, Ser, Trp, Gln, Tyr, Leu, Lys, Ile, Asp or His;
- Xaa at position 92 is Glu, Ser, Ala, Lys, Thr, Ile, Gly, or Pro;
- Xaa at position 94 is Arg, Lys, Asp, Leu, Thr, Ile, Gln, His, Ser, Ala or Pro;
- Xaa at position 95 is Arg, Thr, Pro, Glu, Tyr, Leu, Ser, or Gly;
- Xaa at position 96 is Lys, Asn, Thr, Leu, Gln, Arg, His, Glu, Ser, Ala or Trp;
- Xaa at position 97 is Leu, Ile, Arg, Asp or Met;
- Xaa at position 98 is Thr, Val, Gln, Tyr, Glu, or Phe;
- Xaa at position 99 is Phe, Ser, Cys, His, Gly, Trp, Tyr, Asp, Lys, Leu, Ile, Val or Asn;
- Xaa at position 100 is Tyr, Cys, His, Ser, Trp, Arg or Leu;
- Xaa at position 101 is Leu, Asn, Val, Pro, Arg, Ala, His, Thr, Trp or Met;
- Xaa at position 102 is Lys;
- Xaa at position 103 is Thr, Ser, Asn, Ile, Trp, Lys or Pro;
- Xaa at position 104 is Leu, Ser, Pro, Ala, Glu, Cys, Asp, or Tyr;
- Xaa at position 105 is Glu, Ser, Lys, Pro, Leu, Thr, Tyr, or Arg;
- Xaa at position 106 is Asn, Ala, Pro, Leu, His, Val or Gln;
- Xaa at position 107 is Ala, Ser, Ile, Asn, Pro, Lys or Asp;
- Xaa at position 108 is Gln, Ser, Met, Trp, Arg, Phe, Pro, His, Ile, Tyr or Cys;
- Xaa at position 109 is Ala, Met, Glu, His, Ser, Pro, Tyr, or Leu;
- wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding native amino acids of (1-133) human interleukin-3; and wherein a polypeptide having only the sequence of said mutant (15-125) human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 19. The fusion protein of claim 18 wherein said factor is selected from the group consisting of: GM-CSF, CSF-1, G-CSF, G-CSF Ser.sup.17, M-CSF, erythropoietin (EPO), IL-1, IL-4, IL-2, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-11, IL-12, IL-13, LIF, human growth hormone, B-cell growth factor, B-cell differentiation factor, eosinophil differentiation factor and stem cell factor (SCF).
- 20. A fusion protein consisting of a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant (15-125) human interleukin-3 polypeptide consisting of a modified hIL-3 amino acid sequence of SEQ ID NO:8;
- wherein
- Xaa at position 4 is Asn or Ile;
- Xaa at position 5 is Met, Ala or Ile:
- Xaa at position 6 is Ile, Pro or Leu;
- Xaa at position 9 is Ile, Ala or Leu;
- Xaa at position 11 is Thr or His;
- Xaa at position 15 is Gln, Arg, Val or Ile;
- Xaa at position 18 is Leu, Ala, Asn or Arg;
- Xaa at position 20 is Leu or Ser;
- Xaa at position 23 is Phe, Pro or Ser;
- Xaa at position 24 is Asn or Ala;
- Xaa at position 28 is Gly, Ala, Ser, Asp or Asn;
- Xaa at position 31 is Gln, Val or Met;
- Xaa at position 32 is Asp or Ser;
- Xaa at position 35 is Met, Ile or Asp;
- Xaa at position 36 is Glu or Asp;
- Xaa at position 37 is Asn, Arg or Ser;
- Xaa at position 41 is Arg, Leu or Thr;
- Xaa at position 42 is Pro or Ser;
- Xaa at position 45 is Glu or Leu;
- Xaa at position 46 is Ala or Ser;
- Xaa at position 48 is Asn, Val or Pro;
- Xaa at position 49 is Arg or His;
- Xaa at position 51 is Val or Ser;
- Xaa at position 53 is Ser, Asn, His or Gln;
- Xaa at position 55 is Gln or Glu;
- Xaa at position 59 is Ala or Gly;
- Xaa at position 62 is Ser, Ala or Pro;
- Xaa at position 65 is Lys, Arg or Ser;
- Xaa at position 67 is Leu, Glu or Val;
- Xaa at position 68 is Leu, Glu, Val or Trp;
- Xaa at position 71 is Leu or Val;
- Xaa at position 73 is Leu, Ser or Tyr;
- Xaa at position 74 is Ala or Trp;
- Xaa at position 77 is Ala or Pro;
- Xaa at position 79 is Pro or Ser;
- Xaa at position 81 is His or Thr;
- Xaa at position 84 is His, Ile or Thr;
- Xaa at position 86 is Lys or Arg;
- Xaa at position 87 is Asp;
- Xaa at position 91 is Asn or Glu;
- Xaa at position 95 is Arg, Glu, Leu;
- Xaa at position 98 Thr or Gln;
- Xaa at position 102 is Lys;
- Xaa at position 103 is Thr or Ser;
- Xaa at position 106 is Asn, Gln or His;
- Xaa at position 109 is Ala or Glu;
- wherein from four to about forty-four of the amino acids designated by Xaa are different from the corresponding amino acids of native (15-125)human interleukin-3; and wherein a polypeptide having only the sequence of said mutant (15-125) human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 21. A fusion protein consisting of a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide consisting of a modified hIL-3 amino acid sequence of SEQ ID NO 4; wherein
- Xaa at position 42 is Gly, Asp, Ser, Ile, Leu, Met, Tyr or Ala;
- Xaa at position 45 is Gln, Val, Met or Asn;
- Xaa at position 46 is Asp, Ser, Gln, His or Val;
- Xaa at position 50 is Glu or Asp;
- Xaa at position 51 is Asn, Pro or Thr;
- Xaa at position 62 is Asn or Pro;
- Xaa at position 76 is Ser or Pro;
- Xaa at position 82 is Leu, Trp, Asp, Asn Glu, His, Phe, Ser or Tyr;
- Xaa at position 95 is His, Arg, Thr, Asn or Ser;
- Xaa at position 98 is His, Ile, Leu, Ala, Gln, Lys, Met, Ser, Tyr or Val;
- Xaa at position 100 is Lys or Arg;
- Xaa at position 101 is Asp;
- Xaa at position 105 is Asn or Pro;
- Xaa at position 108 is Arg, Ala or Ser;
- Xaa at position 116 is Lys;
- Xaa at position 122 is Gln or Ile; and
- Xaa at position 123 is Ala, Met or Glu;
- wherein from 4 to about 44 of the amino acids designated by Xaa are different from the corresponding amino acids of native (1-133) human interleukin-3; and wherein a polypeptide having only the sequence of said mutant human interleukin-3 polypeptide R.sub.1 has at least three times greater activity than native human interleukin-3, in at least one assay selected from the group consisting of: AML cell proliferation, TF-1 cell proliferation and Methylcellulose assay;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 22. A fusion protein consisting of a sequence of the formula selected from the group consisting of:
- R.sub.1 -L-R.sub.2, R.sub.2 -L-R.sub.1, R.sub.1 -R.sub.2, R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -L-R.sub.2, Met-Ala-R.sub.2 -L-R.sub.1, Met-Ala-R.sub.1 -R.sub.2, Met-Ala-R.sub.2 -R.sub.1, Met-R.sub.1 -L-R.sub.2, Met-R.sub.2 -L-R.sub.1, Met-R.sub.1 -R.sub.2, Met-R.sub.2 -R.sub.1, Ala-R.sub.1 -L-R.sub.2, Ala-R.sub.2 -L-R.sub.1, Ala-R.sub.1 -R.sub.2 and Ala-R.sub.2 -R.sub.1 ;
- wherein R.sub.1 is a mutant human (15-125) interleukin-3 polypeptide consisting of a modified hIL-3 amino acid sequence selected from the group consisting of:
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:31;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:32;
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:33;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:34;
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:35;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 117S, 120H and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:36;
- (18I, 25H, 29V, 32A, 37S, 42S, 45M, 51R, 55L, 59L, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 117S, 120H and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:37;
- (18I, 25H, 29R, 32N, 37P, 42S, 45M, 51R, 55T, 59L, 62V, 67H, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:38;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82V, 87S, 93S, 98T, 101A, 105Q, 109E, 116V, 117S, 120H and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:39;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 50D, 51R, 55L, 56S, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:40;
- (18I, 23A, 25H, 29R, 32A, 34S, 37P, 42D, 45M, 46S, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:41;
- (18I, 25H, 29R, 32A, 37P, 42D, 45M, 46S, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:42;
- (18I, 25H, 29R, 32A, 37P, 42A, 45V, 50D, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:43;
- (18I, 25H, 29R, 32A, 37P, 42D, 45V, 46S, 50D, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125)hIL-3, residues 3-113 of SEQ ID NO:44;
- (18I, 25H, 29R, 32A, 37P, 42D, 45M, 46S, 50D, 51R, 55L, 60S, 62V, 67N, 69E, 73G, 76A, 79R, 82Q, 87S, 93S, 98I, 101A, 105Q, 109E, 116V, 120Q and 123E)-(15-125) hIL-3, residues 3-113 of SEQ ID NO:45;
- R.sub.2 is R.sub.1 or a factor selected from the group consisting of a colony stimulating factor, a cytokine, a lymphokine, an interleukin, and a hematopoietic growth factor; and
- L is a linker capable of linking R.sub.1 to R.sub.2.
- 23. The fusion protein of claim 22 wherein said factor is selected from the group consisting of: GM-CSF, CSF-1, G-CSF, G-CSF Ser.sup.17, M-CSF, erythropoietin (EPO), IL-1, IL-4, IL-2, IL-5, IL-6, IL-7, IL-8, IL-9, IL-10, IL-11, IL-12, IL-13, LIF, human growth hormone, B-cell growth factor, B-cell differentiation factor, eosinophil differentiation factor and stem cell factor (SCF).
- 24. The fusion protein of claim 22 wherein said factor is G-CSF Ser.sup.17.
- 25. The fusion protein of claim 16, 17, 18, 19, 20, or 21 wherein a polypeptide having only the sequence of said human interleukin-3 polypeptide R.sub.1 has at least five times greater activity than native human interleukin-3.
- 26. The fusion protein of claim 16, 17, 18, 19, 20, or 21 wherein a polypeptide having only the sequence of said human interleukin-3 polypeptide R.sub.1 has at least ten times greater activity than native human interleukin-3.
- 27. A nucleic acid molecule encoding the fusion protein of claim 1.
- 28. A nucleic acid molecule encoding the fusion protein of claim 2.
- 29. A nucleic acid molecule encoding the fusion protein of claim 3.
- 30. A nucleic acid molecule encoding the fusion protein of claim 4.
- 31. A nucleic acid molecule encoding the fusion protein of claim 5.
- 32. A nucleic acid molecule encoding the fusion protein of claim 6.
- 33. A nucleic acid molecule encoding the fusion protein of claim 7.
- 34. A nucleic acid molecule encoding the fusion protein of claim 8.
- 35. A nucleic acid molecule encoding the fusion protein of claim 9.
- 36. A nucleic acid molecule encoding the fusion protein of claim 10.
- 37. A nucleic acid molecule encoding the fusion protein of claim 11.
- 38. A nucleic acid molecule encoding the fusion protein of claim 12.
- 39. A nucleic acid molecule encoding the fusion protein of claim 13.
- 40. A nucleic acid molecule encoding the fusion protein of claim 14.
- 41. A nucleic acid molecule encoding the fusion protein of claim 15.
- 42. A nucleic acid molecule encoding the fusion protein of claim 16.
- 43. A nucleic acid molecule encoding the fusion protein of claim 17.
- 44. A nucleic acid molecule encoding the fusion protein of claim 18.
- 45. A nucleic acid molecule encoding the fusion protein of claim 19.
- 46. A nucleic acid molecule encoding the fusion protein of claim 20.
- 47. A nucleic acid molecule encoding the fusion protein of claim 21.
- 48. A nucleic acid molecule encoding the fusion protein of claim 22.
- 49. A nucleic acid molecule encoding the fusion protein of claim 23.
- 50. A nucleic acid molecule encoding the fusion protein of claim 24.
- 51. A nucleic acid molecule encoding the fusion protein of claim 25.
- 52. A nucleic acid molecule encoding the fusion protein of claim 26.
- 53. A method of producing a fusion protein comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 27, 28, 29, 30, 31, 32, 33, 34, 35 or 36 in a manner allowing expression of said fusion protein and recovering said fusion protein.
- 54. A method of producing a fusion protein comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 37 in a manner allowing expression of said fusion protein and recovering said fusion protein.
- 55. A method of producing a fusion protein comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 38 in a manner allowing expression of said fusion protein and recovering said fusion protein.
- 56. A method of producing a fusion protein comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 39 in a manner allowing expression of said fusion protein and recovering said fusion protein.
- 57. A method of producing a polypeptide comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 40, in a manner allowing expression of said polypeptide and recovering said polypeptide.
- 58. A method of producing a polypeptide comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 41, in a manner allowing expression of said polypeptide and recovering said polypeptide.
- 59. A method of producing a fusion protein comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 42, 43, 44, 45, 46, 47, 48, 49, or 50, in a manner allowing expression of said fusion protein and recovering said fusion protein.
- 60. A method of producing a fusion protein comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 51, in a manner allowing expression of said fusion protein and recovering said fusion protein.
- 61. A method of producing a polypeptide comprising:
- growing under suitable nutrient conditions, a host cell transformed or transfected with a replicable vector comprising said nucleic acid molecule of claim 52, in a manner allowing expression of said polypeptide and recovering said polypeptide.
- 62. A pharmaceutical composition comprising the fusion protein of claim 1, 2, 3, 4, 5, 6, 7, 8, 9, or 10 and a pharmaceutically acceptable carrier.
- 63. A pharmaceutical composition comprising the fusion protein of claim 11 and a pharmaceutically acceptable carrier.
- 64. A pharmaceutical composition comprising the fusion protein of claim 12 and a pharmaceutically acceptable carrier.
- 65. A pharmaceutical composition comprising the fusion protein of claim 13 and a pharmaceutically acceptable carrier.
- 66. A pharmaceutical composition comprising the fusion protein of claim 14 and a pharmaceutically acceptable carrier.
- 67. A pharmaceutical composition comprising the fusion protein of claim 15 and a pharmaceutically acceptable carrier.
- 68. A pharmaceutical composition comprising the fusion protein of claim 16, 17, 18, 19, 20, 21, 22, 23 or 24 and a pharmaceutically acceptable carrier.
- 69. A pharmaceutical composition comprising the fusion protein of claim 25 and a pharmaceutically acceptable carrier.
- 70. A pharmaceutical composition comprising the fusion protein of claim 26 and a pharmaceutically acceptable carrier.
Parent Case Info
This is a continuation-in-part of international application PCT/US93/11197, which was filed on Nov. 22, 1993 and which entered the U.S. national stage under 35 U.S.C. .sctn. as Ser. No. 08/411,795 (now U.S. Pat. No. 5,604,116) on Apr. 6, 1995 and which is in turn a continuation-in-part of U.S. Ser. No. 07/981,044, filed Nov. 24, 1992 (now abandoned).
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Continuation in Parts (2)
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Number |
Date |
Country |
Parent |
PCTUS9311197 |
Nov 1993 |
|
Parent |
981044 |
Nov 1992 |
|