Non-endogenous, constitutively activated known G protein-coupled receptors

Abstract
The invention disclosed in this patent document relates to transmembrane receptors, more particularly to a human G protein-coupled receptor for which the endogenous ligand is known (“known GPCRs”), and most particularly to mutated (non-endogenous) versions of the known GPCRs for use, most preferably in screening assays for the direct identification of candidate compounds as inverse agonists, agonists and partial agonists.
Description




FIELD OF THE INVENTION




The invention disclosed in this patent document relates to transmembrane receptors, and more particularly to G protein-coupled receptors for which the endogenous ligand has been identified (“known GPCR”), and specifically to known GPCRs that have been altered to establish or enhance constitutive activity of the receptor. Most preferably, the altered GPCRs are used for the direct identification of candidate compounds as receptor agonists, inverse agonists or partial agonists for use as therapeutic agents.




BACKGROUND OF THE INVENTION




Although a number of receptor classes exist in humans, by far the most abundant and therapeutically relevant is represented by the G protein-coupled receptor (GPCR or GPCRs) class. It is estimated that there are some 100,000 genes within the human genome, and of these, approximately 2%, or 2,000 genes, are estimated to code for GPCRs. Receptors, including GPCRs, for which the endogenous ligand has been identified are referred to as “known” receptors, while receptors for which the endogenous ligand has not been identified are referred to as “orphan” receptors. GPCRs represent an important area for the development of pharmaceutical products: from approximately 20 of the 100 known GPCRs, 60% of all prescription pharmaceuticals have been developed.




GPCRs share a common structural motif. (All these receptors have seven sequences of between 22 to 24 hydrophobic amino acids that form seven alpha helices, each of which spans the membrane (each span is identified by number, i.e., transmembrane-1 (TM-1), transmembrane-2 (TM-2), etc.). The transmembrane helices are joined by strands of amino acids between transmembrane-2 and transmembrane-3, transmembrane-4 and transmembrane-5, and transmembrane-6 and transmembrane-7 on the exterior, or “extracellular” side, of the cell membrane (these are referred to as “extracellular” regions 1, 2 and 3 (EC-1, EC-2 and EC-3), respectively). The transmembrane helices are also joined by strands of amino acids between transmembrane-1 and transmembrane-2, transmembrane-3 and transmembrane-4, and transmembrane-5 and transmembrane-6 on the interior, or “intracellular” side, of the cell membrane (these are referred to as “intracellular” regions 1, 2 and 3 (IC-1, IC-2 and IC-3), respectively). The “carboxy” (“C”) terminus of the receptor lies in the intracellular space within the cell, and the “amino” (“N”) terminus of the receptor lies in the extracellular space outside of the cell.




Generally, when an endogenous ligand binds with the receptor (often referred to as “activation” of the receptor), there is a change in the conformation of the intracellular region that allows for coupling between the intracellular region and an intracellular “G-protein.” It has been reported that GPCRs are “promiscuous” with respect to G proteins, i.e., that a GPCR can interact with more than one G protein. See, Kenakin, T., 43


Life Sciences


1095 (1988). Although other G proteins exist, currently, Gq, Gs, Gi, Gz and Go are G proteins that have been identified. Endogenous ligand-activated GPCR coupling with the G-protein begins a signaling cascade process (referred to as “signal transduction”). Under normal conditions, signal transduction ultimately results in cellular activation or cellular inhibition. It is thought that the IC-3 loop as well as the carboxy terminus of the receptor interact with the G protein.




Under physiological conditions, GPCRs exist in the cell membrane in equilibrium between two different conformations: an “inactive” state and an “active” state. A receptor in an inactive state is unable to link to the intracellular signaling transduction pathway to produce a biological response. Changing the receptor conformation to the active state allows linkage to the transduction pathway (via the G-protein) and produces a biological response.




A receptor may be stabilized in an active state by an endogenous ligand or a compound such as a drug. Recent discoveries, including but not exclusively limited to modifications to the amino acid sequence of the receptor, provide means other than endogenous ligands or drugs to promote and stabilize the receptor in the active state conformation. These means effectively stabilize the receptor in an active state by simulating the effect of an endogenous ligand binding to the receptor. Stabilization by such ligand-independent means is termed “constitutive receptor activation.”




Traditional ligand-dependent screens seek to indirectly identify compounds that antagonize the action of the ligand on the receptor in an effort to prevent ligand-induced activation of the receptor. However, such compounds, sometimes referred to as neutral-antagonists, generally would not be expected to affect the ligand-independent activity, or overactivity, of the receptor and the subsequent abnormal cellular response that can result from this overactivity. This is particularly relevant to a growing number of diseases, such as those identified in the table below, that have been linked to overactive GPCRs, because traditional neutral-antagonists will not block the abnormal ligand-independent activity of these receptors.















Background Table 1














Disease




Overactive GPCR











Schizophrenia




5-HT2A, D2







Depression




5-HT2A







Hyperthyroidism




Thyrotropin







Hypertension




Angiotensin AT1A







Asthma




Adenosine A1







Melanoma




MC-1







Retinitis Pigmentosa




Rhodopsin receptor















SUMMARY OF THE INVENTION




Disclosed herein are non-endogenous versions of endogenous, known GPCRs and uses thereof.











BRIEF DESCRIPTION OF THE DRAWINGS





FIG. 1

provides graphic results of comparative analysis of a co-transfection of non-endogenous TSHR-A6231 (“signal enhancer”) and an endogenous target receptor, in this case GPR24 (“GPR24 wt”), versus non-endogenous, constitutively activated versions of the target receptor GPR24 (“T255K,” “T255K/T257R,” “24-IC3-SST2,” “C305Y,” “P271L,” “W269C,” “W269F,” “W269L,” “F265I,” I261Q,” and “D140N”) co-transfected with non-endogenous TSHR-A623I, utilizing an adenylyl cyclase assay. This assay involved the addition of TSH and MCH, the endogenous ligands for TSHR and GPR24, respectively.





FIG. 2

provides graphic results of comparative analysis of a co-transfection of non-endogenous signal enhancer TSBR-A623I (with and without TSH) and endogenous target receptor GPR5 (“GPR5 wt”), versus non-endogenous, constitutively activated target receptor GPR5 (“V224K”) co-transfected with non-endogenous TSHR-A623I (with and without TSH), utilizing an adenylyl cyclase assay.





FIGS. 3A-3E

provide a diagrammatic representation of the signal measured comparing CMV, non-endogenous, constitutively activated GPCRs, utilizing 8XCRE-Luc reporter plasmid.





FIG. 4

provides an illustration of IP


3


production from several non-endogenous versions of GPR24 as compared with the endogenous version of this receptor.





FIG. 5

is a graphic representation of the results of a membrane-based cyclic AMP assay providing comparative results for constitutive signaling of TSHR-A623K:Fusion Protein and a control vector (pCMV).











DETAILED DESCRIPTION




The scientific literature that has evolved around receptors has adopted a number of terms to refer to ligands having various effects on receptors. For clarity and consistency, the following definitions will be used throughout this patent document. To the extent that these definitions conflict with other definitions for these terms, the following definitions shall control:




AGONISTS shall mean materials (e.g., ligands, candidate compounds) that activate the intracellular response when they bind to the receptor, or enhance GTP binding to membranes.




AMINO ACID ABBREVIATIONS used herein are set out in Table A:














TABLE A











ALANINE




ALA




A






ARGININE




ARG




R






ASPARAGINE




ASN




N






ASPARTIC ACID




ASP




D






CYSTEINE




CYS




C






GLUTAMIC ACID




GLU




E






GLUTAMINE




GLN




Q






GLYCINE




GLY




G






HISTIDINE




HIS




H






ISOLEUCINE




ILE




I






LEUCINE




LEU




L






LYSINE




LYS




K






METHIONINE




MET




M






PHENYLALANINE




PHE




F






PROLINE




PRO




P






SERINE




SER




S






THREONINE




THR




T






TRYPTOPHAN




TRP




W






TYROSINE




TYR




Y






VALINE




VAL




V














PARTIAL AGONISTS shall mean materials (e.g., ligands, candidate compounds) that activate the intracellular response when they bind to the receptor to a lesser degree/extent than do agonists, or enhance GTP binding to membranes to a lesser degree/extent than do agonists.




ANTAGONIST shall mean materials (e.g., ligands, candidate compounds) that competitively bind to the receptor at the same site as the agonists but which do not activate the intracellular response initiated by the active form of the receptor, and can thereby inhibit the intracellular responses by agonists or partial agonists. ANTAGONISTS do not diminish the baseline intracellular response in the absence of an agonist or partial agonist.




CANDIDATE COMPOUND, in the context of the disclosed invention, shall mean a small molecule (for example, and not limitation, a chemical compound) that is amenable to a screening technique.




COMPOSITION means a material comprising at least one component; a “pharmaceutical composition” is an example of a composition.




COMPOUND EFFICACY shall mean a measurement of the ability of a compound to inhibit or stimulate receptor functionality, as opposed to receptor binding affinity. Exemplary means of detecting compound efficacy are disclosed in the Example section of this patent document.




CODON shall mean a grouping of three nucleotides (or equivalents to nucleotides) which generally comprise a nucleoside (adenosine (A), guanosine (G), cytidine (C), uridine (U) and thymidine (T)) coupled to a phosphate group and which, when translated, encodes an amino acid.




CONSTITUTIVELY ACTIVATED RECEPTOR shall mean a receptor subject to constitutive receptor activation. A constitutively activated receptor can be endogenous or non-endogenous.




CONSTITUTIVE RECEPTOR ACTIVATION shall mean stabilization of a receptor in the active state by means other than binding of the receptor with its endogenous ligand or a chemical equivalent thereof.




CONTACT or CONTACTING shall mean bringing at least two moieties together, whether in an in vitro system or an in vivo system.




DIRECTLY IDENTIFYING or DIRECTLY IDENTIFIED, in relationship to the phrase “candidate compound”, shall mean the screening of an candidate compound against a constitutively activated receptor, preferably a constitutively activated receptor, and most preferably against a constitutively activated G protein-coupled cell surface receptor, and assessing the compound efficacy of such compound. This phrase is, under no circumstances, to be interpreted or understood to be encompassed by or to encompass the phrase “indirectly identifying” or “indirectly identified.”




ENDOGENOUS shall mean a material that a mammal naturally produces. ENDOGENOUS in reference to, for example and not limitation, the term “receptor,” shall mean that which is naturally produced by a mammal (for example, and not limitation, a human) or a virus. By contrast, the term NON-ENDOGENOUS in this context shall mean that which is not naturally produced by a mammal (for example, and not limitation, a human) or a virus. For example, and not limitation, a receptor which is not constitutively active in its endogenous form, but when manipulated becomes constitutively active, is most preferably referred to herein as a “non-endogenous, constitutively activated receptor.” Both terms can be utilized to describe both “in vivo” and “in vitro” systems. For example, and not limitation, in a screening approach, the endogenous or non-endogenous receptor may be in reference to an in vitro screening system. As a further example and not limitation, where the genome of a mammal has been manipulated to include a non-endogenous constitutively activated receptor, screening of a candidate compound by means of an in vivo system is viable.




G PROTEIN COUPLED RECEPTOR FUSION PROTEIN and GPCR FUSION PROTEIN, in the context of the invention disclosed herein, each mean a non-endogenous protein comprising an endogenous, constitutively activate GPCR or a non-endogenous, constitutively activated GPCR fused to at least one G protein, most preferably the alpha (α) subunit of such G protein (this being the subunit that binds GTP), with the G protein preferably being of the same type as the G protein that naturally couples with endogenous GPCR. For example, and not limitation, in an endogenous state, if the G protein “Gsα” is the predominate G protein that couples with the GPCR, a GPCR Fusion Protein based upon the specific GPCR would be a non-endogenous protein comprising the GPCR fused to Gsα; in some circumstances, as will be set forth below, a non-predominant G protein can be fused to the GPCR. The G protein can be fused directly to the c-terminus of the constitutively active GPCR or there may be spacers between the two.




HOST CELL shall mean a cell capable of having a Plasmid and/or Vector incorporated therein. In the case of a prokaryotic Host Cell, a Plasmid is typically replicated as a autonomous molecule as the Host Cell replicates (generally, the Plasmid is thereafter isolated for introduction into a eukaryotic Host Cell); in the case of a eukaryotic Host Cell, a Plasmid is integrated into the cellular DNA of the Host Cell such that when the eukaryotic Host Cell replicates, the Plasmid replicates. Preferably, for the purposes of the invention disclosed herein, the Host Cell is eukaryotic, more preferably, mammalian, and most preferably selected from the group consisting of Hek-293, Hek-293T and COS-7 cells.




INDIRECTLY IDENTIFYING or INDIRECTLY IDENTIFIED means the traditional approach to the drug discovery process involving identification of an endogenous ligand specific for an endogenous receptor, screening of candidate compounds against the receptor for determination of those which interfere and/or compete with the ligand-receptor interaction, and assessing the efficacy of the compound for affecting at least one second messenger pathway associated with the activated receptor.




INHIBIT or INHIBITING, in relationship to the term “response” shall mean that a response is decreased or prevented in the presence of a compound as opposed to in the absence of the compound.




INVERSE AGONISTS shall mean materials (e.g., ligand, candidate compounds) which bind to either the endogenous form of the receptor or to the constitutively activated form of the receptor, and which inhibit the baseline intracellular response initiated by the active form of the receptor below the normal base level of activity which is observed in the absence of agonists or partial agonists, or decrease GTP binding to membranes. Preferably, the baseline intracellular response is inhibited in the presence of the inverse agonist by at least 30%, more preferably by at least 50%, and most preferably by at least 75%, as compared with the baseline response in the absence of the inverse agonist.




KNOWN RECEPTOR shall mean an endogenous receptor for which the endogenous ligand specific for that receptor has been identified.




LIGAND shall mean an endogenous, naturally occurring molecule specific for an endogenous, naturally occurring receptor.




MUTANT or MUTATION in reference to an endogenous receptor's nucleic acid and/or amino acid sequence shall mean a specified change or changes to such endogenous sequences such that a mutated form of an endogenous, non-constitutively activated receptor evidences constitutive activation of the receptor. In terms of equivalents to specific sequences, a subsequent mutated form of a human receptor is considered to be equivalent to a first mutation of the human receptor if (a) the level of constitutive activation of the subsequent mutated form of a human receptor is substantially the same as that evidenced by the first mutation of the receptor; and (b) the percent sequence (amino acid and/or nucleic acid) homology between the subsequent mutated form of the receptor and the first mutation of the receptor is at least about 80%, more preferably at least about 90% and most preferably at least 95%. Ideally, and owing to the fact that the most preferred cassettes disclosed herein for achieving constitutive activation includes a single amino acid and/or codon change between the endogenous and the non-endogenous forms of the GPCR, the percent sequence homology should be at least 98%.




NON-ORPHAN RECEPTOR shall mean an endogenous naturally occurring molecule specific for an endogenous naturally occurring ligand wherein the binding of a ligand to a receptor activates an intracellular signaling pathway.




ORPHAN RECEPTOR shall mean an endogenous receptor for which the endogenous ligand specific for that receptor has not been identified or is not known.




PHARMACEUTICAL COMPOSITION shall mean a composition comprising at least one active ingredient, whereby the composition is amenable to investigation for a specified, efficacious outcome in a mammal (for example, and not limitation, a human). Those of ordinary skill in the art will understand and appreciate the techniques appropriate for determining whether an active ingredient has a desired efficacious outcome based upon the needs of the artisan.




PLASMID shall mean the combination of a Vector and cDNA. Generally, a Plasmid is introduced into a Host Cell for the purposes of replication and/or expression of the cDNA as a protein.




STIMULATE or STIMULATING, in relationship to the term “response” shall mean that a response is increased in the presence of a compound as opposed to in the absence of the compound.




VECTOR in reference to cDNA shall mean a circular DNA capable of incorporating at least one cDNA and capable of incorporation into a Host Cell.




The order of the following sections is set forth for presentational efficiency and is not intended, nor should be construed, as a limitation on the disclosure or the claims to follow.




A. Introduction




Constitutively active forms of known G protein-coupled receptors, disclosed in the present patent document, can be obtained by site-directed mutational methods, well-known to those skilled in the art. A constitutively active receptor useful for direct identification of candidate compounds is preferably achieved by mutating the receptor at a specific location within an intracellular loop, most preferably within the intracellular loop three (IC3) region. Such mutation can produce a non-endogenous receptor that is intended to be constitutively activated, as evidenced by an increase in the functional activity of the receptor, for example, an increase in the level of second messenger activity. While standard methods of site-directed mutagenesis may be employed, a preferred method is one that is disclosed in a co-pending, commonly assigned patent document U.S. application Ser. No. 09/170,496, filed Oct. 13, 1998 which is incorporated herein by reference.




Table B below lists known endogenous GPCRs that have been converted to non-endogenous versions thereof, their respective G protein and endogenous ligand.














TABLE B









Known GPCRs




G Protein




Endogenous Ligand











5HT-1A




Gi




Serotonin






5HT-1B




Gi




Serotonin






5HT-1D




Gi




Serotonin






5HT-1E




Gi




Serotonin






5HT-1F




Gi




Serotonin






5HT-2B




Gi




Serotonin






5HT-4A




N/I




Serotonin






5HT-4B




N/I




Serotonin






5HT-4C




N/I




Serotonin






5HT-4D




N/I




Serotonin






5HT-4E




N/I




Serotonin






5HT-5A




Unknown




Serotonin






5HT-6




Gs




Serotonin






5HT-7




Gs




Serotonin






AVPR1A




Gq




Arginine Vasopressin






AVPRIB




Gq




Arginine Vasopressin






AVPR2




Gs




Arginine Vasopressin






BBR3




Gq




Bombesin






BDKR1




Gq




Bradykinin






BDKR2




Gq




Bradykinin






C3a




N/I




Anaphylatoxin






C5a




N/I




Anaphylatoxin






CB1




Gi




Cannabinoid






CB2




Gi




Cannabinoid






CCR2b




Gi




Monocyte chemoattractant








(MCP)






CCR3




Gi




Eotaxin, Leukotactin-1,








RANTES, MCP






CCR5




Gi




MIP-1α, MIP-1β,








RANTES






CCR8




Gi




I-309, TARC, MIP-1β






CCR9




N/I




Thymus-expressed








chemokine (TECK)






CRFR1




Gs




Corticotropin-releasing-








factor






CXCR4




Gi




SDF1






Dopamine D1




Gs




Dopamine






Dopamine D2




Gi




Dopamine






Dopamine D3




Gi




Dopamine






Dopamine D5




Gs




Dopamine






ETA




Gq




Endothelin






ETB




Gq




Endothelin






FPR1




N/I




Formylpeptide






FPRL1




N/I




formylpeptide






GALR1




Gi




Galanin






GALR2




Gi/Gq




Galanin






GIP




N/I




Gastric inhibitory








polypeptide






mGluR1




Gq




Glutamate






GPR5




N/I




Single C motif-1 (SMC-1)






GPR24




Gi/Gq




Melanin Concentrating






(also known as





Hormone






MCH or






SLC-1)






GRPR




Gq




Gastrin releasing peptide






M1




Gq




Acetylcholine






M2




Gi




Acetylcholine






M3




Gq




Acetylcholine






M4




Gi




Acetylcholine






M5




Gq




Acetylcholine






MC3




Gs




Melanocortin






NK1R




Gq




Substance P






NK2R




Gq




Neurokinin-A






NK3R




Gq




Neurokinin-B






NMBR




Gq




Neuromedin B






NPY5




Gi




Neuropeptide Y






NTSR1




Gq




Neurotensin






NTSR2




Gq




Neurotensin






OPRD




Gi




Opiod






OPRL1




Gi




Opiod






OPRK




Gi




Opiod






OPRM




Gi




Opiod






OPRM1A




Gi




Opiod






OX


1


R




N/I




Orexin






OX


2


R




N/I




Orexin






PACAP




Gs




Pituitary adenylyl cyclase








activating peptide






PAF




N/I




Platelet activating factor






PGE EP1




N/I




Prostaglandin






PGE EP2




Gs




Prostaglandin






PGE EP4




N/I




Prostaglandin






PTHR1




N/I




Parathyroid hormone






PTHR2




N/I




Parathyroid hormone






SCTR




Gs




Secretin






SST1




Gi




Somatostatin






SST2




Gi




Somatostatin






SST3




Gi




Somatostatin






SST4




Gi




Somatostatin






SST5




Gi




Somatostatin






TSHR




Gs




Thyroid Stimulating








Hormone






VIPR




Gs




Vasoactive Intestinal








Peptide






VIPR2




Gs




Vasoactive Intestinal








Peptide











Note:










N/I means not indicated













B. Receptor Screening




Screening candidate compounds against a non-endogenous, constitutively activated version of the known GPCRs disclosed herein allows for the direct identification of candidate compounds which act at the cell surface of the receptor, without requiring use of the receptor's endogenous ligand. By determining areas within the body where the endogenous version of known GPCRs disclosed herein is expressed and/or over-expressed, it is possible to determine related disease/disorder states which are associated with the expression and/or over-expression of the receptor; such an approach is disclosed in this patent document.




Table C below lists the known GPCRs and tissues within the body are expressed and/or over-expressed. The listed references provide support for such tissue expression.














TABLE C









Known








GPCRs




Location of Expression




Reference











5HT-1A




N/I




N/I






5HT-1B




Striatum




Jin, H. et al., 267(9) J Biol








Chem 5735 (1992)






5HT-1D




Cerebral cortex




Weinshank, R. L. et al., 89(8)








Proc Natl Acad Sci USA








3630 (1992)






5HT-1E




N/I




N/I






5HT-1F




Brain




Adham, N. et al., 90 Proc








Natl Acad Sci USA 408








(1993)






5HT-2B




Various tissues, including




Kursar, J. D., 46(2_Mol







Brain




Pharmacol 227 (1994)






5HT-4A




Brain, Intestine and Atrium




Blondel, O. et al., 70 J








Nerochem 2252 (1998)






5HT-4B




Brain, Intestine and Atrium




Blondel, O. et al., 70 J








Nerochem 2252 (1998)






5HT-4C




Brain, Intestine and Atrium




Blondel, O. et al., 70 J








Nerochem 2252 (1998)






5HT-4D




Intestine




Blondel, O. et al., 70 J








Neurochem 2252 (1998)






5HT-4E




Brain




Claeysen, S. et al., 55(5) Mol








Pharmacol 910 (1999)






5HT-5A




Brain




Rees, S. et al., 355(3) FEBS








Lett 242 (1994)






5HT-6




Caudate Nucleus




Kohen, R. et al., 66(1) J








Neurochem 47 (1996)






5HT-7




Brain, Coronary artery




Bard, J. A. et al., 268(31) J








Biol Chem 23422 (1993)






AVPR1A




N/I




N/I






AVPR1B




Pituitary




Sugimoto, T. et al., 269(43) J.








Biol. Chem 27088 (1994)






AVPR2




Lung, Kidney




Fay, M. J., et al., 17(3)








Peptides 477 (1996)






BBR3




Testis, Lung carcinoma




Fathi, Z. et al., 268(8) J. Biol.








Chem. 5979 (1993)






BDKR1




N/I




N/I






BDKR2




N/I




N/I






C3a




Lung, Spleen, Ovary,




Ames, R. et al., 271(34) J.







Placenta, Small Intestine and




Biol. Chem 20231(1996)







Brain






C5a




N/I




N/I






CB1




Brain




Gerard, C. M. et al., 279








Biochem J. 129 (1991)






CB2




Spleen, Macrophage




Munro, S. et al., 365(6441)








Nature 61 (1993)






CCR2b




N/I




N/I






CCR3




Endometrium




Zhang, J. et al., 62(2) Biol








Reprod 404 (2000)






CCR5




Thymus, Spleen




Raport, C. J. et al., 271(29) J








Biol Chem 17161 (1996)






CCR8




Thymus, Spleen and Lymph




Napolitano M. et al., Forum







nodes




(Geneva) 1999 Oct-








Dec;9(4):315-24






CCR9




Thymus




Zaballos, A. et al., 162(10) J.








Immunol 5671 (1999)






CRFR1




Brain, Pituitary




Perrin, M. H. et al., 133(6)








Endocrinology 3058 (1993)






CXCR4




Colonic epithelial cells




Jordan, N. J. et al., 104(8) J








Clin Invest 1061 (1999)






Dopamine




Caudate, Nucleus accumbens




Dearry, A. et al., 347 Nature






D1




and Olfactory tubercle




72 (1990)






Dopamine




Retina




Dearry, A. et al., 11(5) Cell






D2





Mol. Neurobiol. 437 (1991)






Dopamine




Brain




Schmauss, C. et al., 90(19)






D3





Proc Natl Acad Sci USA








8942 (1993)






Dopamine




Brain




Sunahara, R. K. et al.,






D5





350(6319) Nature 614 (1991)






ETA




Placenta, Uterus, Testis,




Adachi, M. et al., 180(3)







Adrenal gland




Biochem Biophys Res








Commun 1265 (1991)






ETB




N/I




N/I






FPR1




N/I




N/I






FPRL1




N/I




N/I






GALR1




Hypothalamic




Gundlach, A. L. et al., 863







paraventricular, Supraoptic




Ann NY Acad Sci 241







nuclei




(1998)






GALR2




Hypothalamus,




Fathi, Z. et al., 51 Brain Res







Hippocampus, Anterior




Mol Brain Res 49 (1997)







pituitary






GIP




N/I




N/I






mGluR1




Brain




Stephan, D. et al., 35(12)








Neuropharmacology 1649








(1996)






GPR5




Leukocyte cells




Shan, L. et al., 268(3)








Biochem Biophys Res








Commun 938 (2000)






GPR24




Fore-brain, Hypothalamus




Kolakowki L F Jr. et al.,






(also





398(2-3) FEBS Lett 253






known





(1996)






as MCH






or SLC-1)






GRPR




Lung carcinoma cells




Corjay, M. H. et al., 266 Jo








Biol Chem 18771 (1991)






M1




Heart, Pancreas and Neuronal




Peralta, E. G. et al., Embo J.







cell lines




6(13) 3923 (1987)






M2




Heart, Pancreas and Neuronal




Peralta, E. G. et al., Embo J.







cell lines




6(13) 3923 (1987)






M3




Heart, Pancreas and Neuronal




Peralta, E. G. et al., Embo J.







cell lines




6(13) 3923 (1987)






M4




Heart, Pancreas and Neuronal




Peralta, E. G. et al., Embo J.







cell lines




6(13) 3923 (1987)






M5




Brain




Bonner, T. I. et al., Neuron








1(5), 403 (1988)






MC3




Brain, Placenta, Gut




Gantz I. et al., 268(11) Jo








Biol Chem 8246 (1993)






NK1R




Spinal cord, Lung




Taked, Y. et aL, 179(3)








Biochem Biophys Res








Commun 1232(1991)






NK2R




N/I




N/I






NK3R




N/I




N/I






NMBR




Lung carcinoma cells




Corjay, M. H. et al., 266 Jo








Biol Chem 18771 (1991)






NPY5




Hypothalamus




Gerald, C. et al., 382 Nature








168 (1996)






NTSR1




Brain, Small intestine




Vita, N. et al., 17 (1-2) FEBS








Lett 139 (1993)






NTSR2




N/I




N/I






OPRD




Peripheral blood




Wick, M. J. et al., 64(1) J.







lymphocytes




Neuroimmunol 29 (1996)






OPRL1




N/I




N/I






OPRK




Placenta, Brain




Manson, E. et al., 202(3)








Biochem Biophys Res








Commun 1431 (1994)






OPRM




N/I




N/I






OPRM1A




N/I




N/I






OX


1


R




Hypothalamus




Sakurai T. et al., 92 Cell 573








(1998)






OX


2


R




Hypothalamus




Sakurai T. et al., 92 Cell 573








(1998)






PACAP




Brain




Ogi, K. et al., 196(3)








Biochem Biophys Res








Commun 1511 (1993)






PAF




N/I




N/I






PGE EP1




Kidney




Watabe, A. et al., 268(27) J








Biol Chem 20175 (1993)






PGE EP2




Small Intestine




Bastien, L. et al., 269(16) J.








Biol. Chem 11873 (1994)






PGE EP4




N/I




N/I






PTHR1




Bone, Kidney




Schipani, E. et al., 132(5)








Endocrinology 2157 (1993)






PTHR2




Brain, Pancreas




Usdin, T. B. et al., 270(26) J.








Biol Chem 15455 (1995)






SCTR




Pancreas, Intestine




Chow, B. K., 212(1) Biochem








Biophys Res Commun 204








(1995)






SST1




Jejunum, Stomach




Yamada Y. et al., 89 Proc








Natl Acad Sci USA 251








(1992)






SST2




Cerebrum, Kidney




Yamada Y. et al., 89 Proc








Natl Acad Sci USA 251








(1992)






SST3




Brain, Pancreatic islet




Yamada Y. et al., 6 Mol








Endocrinol 2136 (1992)






SST4




Fetal, Adult Brain, Lung




Rohser L. et al., 90(9) Pro








Natl Acad Sci USA 4146








(1993)






SST5




Pituitary




Panetta R. et al., 45(3) mol








Pharmacol 417 (1994)






TSHR




Retro-orbital tissues,




Feliciello A. et al 342 Lancet







Exophthalmos




337 (1993)






VIPR




Lung




Sreedharan, S. P. et al.,








193(2) Biochem Biophys Res








Commun 546 (1993)






VIPR2




Skeletal muscle




Adamou, J. E. et al., 209(2)








Biochem Biophys Res








Commun 385 (1995)











Note:










N/I means not indicated













Creation of a non-endogenous version of a known GPCR that may evidence constitutive activity is most preferably based upon the distance from a proline residue located within TM6 of the GPCR; this technique is disclosed in co-pending and commonly assigned patent document U.S. Ser. No. 09/170,496, incorporated herein by reference. This technique is not predicated upon traditional sequence “alignment” but rather a specified distance from the aforementioned TM6 proline residue. By mutating the amino acid residue located 16 amino acid residues from this residue (presumably located in the IC3 region of the receptor) to, most preferably, a lysine residue, such activation may be obtained. Other amino acid residues may be used for the mutation, but lysine is most preferred.




D. Disease/Disorder Identification and/or Selection




As will be set forth in greater detail below, most preferably inverse agonists, partial agonists and agonists in the form of small molecule chemical compounds to the non-endogenous, constitutively activated GPCR can be identified by the methodologies of this invention. Such compounds are ideal candidates as lead modulators in drug discovery programs for treating diseases or disorders associated with a particular receptor. The ability to directly identify such compounds to the GPCR, in the absence of use of the receptor's endogenous ligand, allows for the development of pharmaceutical compositions.




Preferably, in situations where it is unclear what disease or disorder may be associated with a receptor; the DNA sequence of the known GPCR is used to make a probe for (a) dot-blot analysis against tissue-mRNA, and/or (b) RT-PCR identification of the expression of the receptor in tissue samples. The presence of a receptor in a tissue source, or a diseased tissue, or the presence of the receptor at elevated concentrations in diseased tissue compared to a normal tissue, can be preferably utilized to identify a correlation with a treatment regimen, including but not limited to, a disease associated with that disease. Receptors can equally well be localized to regions of organs by this technique. Based on the known functions of the specific tissues to which the receptor is localized, the putative functional role of the receptor can be deduced.




E. Screening of Candidate Compounds




1. Generic GPCR Screening Assay Techniques




When a G protein receptor becomes constitutively active, it binds to a G protein (e.g., Gq, Gs, Gi, Gz, Go) and stimulates the binding of GTP to the G protein. The G protein then acts as a GTPase and slowly hydrolyzes the GTP to GDP, whereby the receptor, under normal conditions, becomes deactivated. However, constitutively activated receptors continue to exchange GDP to GTP. A non-hydrolyzable analog of GTP, [


35


S]GTPγS, can be used to monitor enhanced binding to membranes which express constitutively activated receptors. It is reported that [


35


S]GTPγS can be used to monitor G protein coupling to membranes in the absence and presence of ligand. An example of this monitoring, among other examples well-known and available to those in the art, was reported by Traynor and Nahorski in 1995. The preferred use of this assay system is for initial screening of candidate compounds because the system is generically applicable to all G protein-coupled receptors regardless of the particular G protein that interacts with the intracellular domain of the receptor.




2. Specific GPCR Screening Assay Techniques




Once candidate compounds are identified using the “generic” G protein-coupled receptor assay (i.e., an assay to select compounds that are agonists, partial agonists, or inverse agonists), further screening to confirm that the compounds have interacted at the receptor site is preferred. For example, a compound identified by the “generic” assay may not bind to the receptor, but may instead merely “uncouple” the G protein from the intracellular domain.




a. Gs, Gz and Gi.




Gs stimulates the enzyme adenylyl cyclase. Gi (and Gz and Go), on the other hand, inhibit this enzyme. Adenylyl cyclase catalyzes the conversion of ATP to cAMP; thus, constitutively activated GPCRs that couple the Gs protein are associated with increased cellular levels of cAMP. On the other hand, constitutively activated GPCRs that couple Gi (or Gz, Go) protein are associated with decreased cellular levels of cAMP. See, generally, “Indirect Mechanisms of Synaptic Transmission,” Chpt. 8


, From Neuron To Brain


(3


rd


Ed.) Nichols, J. G. et al eds. Sinauer Associates, Inc. (1992). Thus, assays that detect cAMP can be utilized to determine if a candidate compound is, e.g., an inverse agonist to the receptor (i.e., such a compound would decrease the levels of cAMP). A variety of approaches known in the art for measuring cAMP can be utilized; a most preferred approach relies upon the use of anti-cAMP antibodies in an ELISA-based format. Another type of assay that can be utilized is a second messenger reporter system assay. Promoters on genes drive the expression of the proteins that a particular gene encodes. Cyclic AMP drives gene expression by promoting the binding of a cAMP-responsive DNA binding protein or transcription factor (CREB) that then binds to the promoter at specific sites called cAMP response elements and drives the expression of the gene. Reporter systems can be constructed which have a promoter containing multiple cAMP response elements before the reporter gene, e.g., β-galactosidase or luciferase. Thus, a constitutively activated Gs-linked receptor causes the accumulation of cAMP that then activates the gene and expression of the reporter protein. The reporter protein such as β-galactosidase or luciferase can then be detected using standard biochemical assays (Chen et al. 1995).




b. Go and Gq.




Gq and Go are associated with activation of the enzyme phospholipase C, which in turn hydrolyzes the phospholipid PIP


2


, releasing two intracellular messengers: diacycloglycerol (DAG) and inistol 1,4,5-triphoisphate (IP


3


). Increased accumulation of PP


3


is associated with activation of Gq- and Go-associated receptors. See, generally, “Indirect Mechanisms of Synaptic Transmission,” Chpt. 8


, From Neuron To Brain


(3


rd


Ed.) Nichols, J. G. et al eds. Sinauer Associates, Inc. (1992). Assays that detect IP


3


accumulation can be utilized to determine if an candidate compound is, e.g., an inverse agonist to a Gq- or Go-associated receptor (i.e., such a compound would decrease the levels of IP


3


). Gq-associated receptors can also be examined using an AP1 reporter assay in that Gq-dependent phospholipase C causes activation of genes containing AP1 elements; thus, activated Gq-associated receptors will evidence an increase in the expression of such genes, whereby inverse agonists thereto will evidence a decrease in such expression, and agonists will evidence an increase in such expression. Commercially available assays for such detection are available.




3. Ligand-Based Confirmation Assays




The candidate compounds directly identified using the techniques (or equivalent techniques) above are then, most preferably, verified using a ligand-based verification assay, such as the one set forth in the protocol of Example 8. The importance here is that the candidate compound be directly identified; subsequent confirmation, if any, using the endogenous ligand, is merely to confirm that the directly identified candidate compound has targeted the receptor.




For example, sumatriptan is a well-known agonist of the 5-HT1B and 5-HT1D receptors, while naltrindole is a well-known antagonist to the OPMID receptor. Accordingly, an agonist (sumatriptan) and/or antagonist (naltrindole) competitive binding assay(s) can be used to confirm that those candidate compounds directly identified using a ligand independent screening technique comprising non-endogenous, constitutively activated 5-HT1B or 5-HT1D, and non-endogenous constitutively activated OPM1D, respectfully, may be used for confirmatory purposes. Those skilled in the art are credited with the ability to select techniques for ligand-based confirmation assays.




4. GPCR Fusion Protein




The use of a non-endogenous, constitutively activated GPCR, for use in screening of candidate compounds for the direct identification of inverse agonists, agonists and partial agonists, provides an interesting screening challenge in that, by definition, the receptor is active even in the absence of an endogenous ligand bound thereto. Thus, in order to differentiate between, e.g., the non-endogenous receptor in the presence of a candidate compound and the non-endogenous receptor in the absence of that compound, with an aim of such a differentiation to allow for an understanding as to whether such compound may be an inverse agonist, agonist, partial agonist or has no affect on such a receptor, it is preferred that an approach be utilized that can enhance such differentiation. A preferred approach is the use of a GPCR Fusion Protein.




Generally, once it is determined that a non-endogenous GPCR has been constitutively activated using the assay techniques set forth above (as well as others), it is possible to determine the predominant G protein that couples with the endogenous GPCR. Coupling of the G protein to the GPCR provides a signaling pathway that can be assessed. Because it is most preferred that screening take place by use of a mammalian expression system, such a system will be expected to have endogenous G protein therein. Thus, by definition, in such a system, the non-endogenous, constitutively activated GPCR will continuously signal. In this regard, it is preferred that this signal be enhanced such that in the presence of, e.g., an inverse agonist to the receptor, it is more likely that it will be able to more readily differentiate, particularly in the context of screening, between the receptor when it is contacted with the inverse agonist.




The GPCR Fusion Protein is intended to enhance the efficacy of G protein coupling with the non-endogenous GPCR. The GPCR Fusion Protein is preferred for screening with a non-endogenous, constitutively activated GPCR because such an approach increases the signal that is most preferably utilized in such screening techniques. This is important in facilitating a significant “signal to noise” ratio; such a significant ratio is preferred for the screening of candidate compounds as disclosed herein.




The construction of a construct useful for expression of a GPCR Fusion Protein is within the purview of those having ordinary skill in the art. Commercially available expression vectors and systems offer a variety of approaches that can fit the particular needs of an investigator. The criteria of importance for such a GPCR Fusion Protein construct is that the endogenous GPCR sequence and the G protein sequence both be in-frame (preferably, the sequence for the endogenous GPCR is upstream of the G protein sequence) and that the “stop” codon of the GPCR must be deleted or replaced such that upon expression of the GPCR, the G protein can also be expressed. The GPCR can be linked directly to the G protein, or there can be spacer residues between the two (preferably, no more than about 12, although this number can be readily ascertained by one of ordinary skill in the art). Use of a spacer is preferred (based upon convenience) in that some restriction sites that are not used will, effectively, upon expression, become a spacer. Most preferably, the G protein that couples to the non-endogenous GPCR will have been identified prior to the creation of the GPCR Fusion Protein construct. Because there are only a few G proteins that have been identified, it is preferred that a construct comprising the sequence of the G protein (i.e., a universal G protein construct) be available for insertion of an endogenous GPCR sequence therein; this provides for efficiency in the context of large-scale screening of a variety of different endogenous GPCRs having different sequences.




F. Co-Transfection of a Target Gi Coupled GPCR with a Signal-Enhancer Gs Coupled GPCR (cAMP Based Assays)




A Gi coupled receptor is known to inhibit adenylyl cyclase, and, therefore, decrease the level of cAMP production, which can make assessment of cAMP levels challenging. An effective technique in measuring the decrease in production of cAMP as an indication of constitutive activation of a receptor that predominantly couples Gi upon activation can be accomplished by co-transfecting a signal enhancer, e.g., a non-endogenous, constitutively activated receptor that predominantly couples with Gs upon activation (e.g., TSHR-A623I, disclosed below), with the Gi linked GPCR (such a technique is exemplified herein with the Gi coupled receptor, GPR24). As is apparent, constitutive activation of a Gs coupled receptor can be determined based upon an increase in production of cAMP. Constitutive activation of a Gi coupled receptor leads to a decrease in production cAMP. Thus, the co-transfection approach is intended to advantageously exploit these “opposite” affects. For example, co-transfection of a non-endogenous, constitutively activated Gs coupled receptor (the “signal enhancer”) with the endogenous Gi coupled receptor (the “target receptor”) provides a baseline cAMP signal (i.e., although the Gi coupled receptor will decrease cAMP levels, this “decrease” will be relative to the substantial increase in cAMP levels established by constitutively activated Gs coupled signal enhancer). By then co-transfecting the signal enhancer with a constitutively activated version of the target receptor, cAMP would be expected to further decrease (relative to base line) due to the increased functional activity of the Gi target (i.e., which decreases cAMP).




Screening of candidate compounds using a cAMP based assay can then be accomplished, with two provisos: first, relative to the Gi coupled target receptor, “opposite” effects will result, i.e., an inverse agonist of the Gi coupled target receptor will increase the measured cAMP signal, while an agonist of the Gi coupled target receptor will decrease this signal; second, as would be apparent, candidate compounds that are directly identified using this approach should be assessed independently to ensure that these do not target the signal enhancing receptor (this can be done prior to or after screening against the co-transfected receptors).




G. Medicinal Chemistry




Generally, but not always, direct identification of candidate compounds is preferably conducted in conjunction with compounds generated via combinatorial chemistry techniques, whereby thousands of compounds are randomly prepared for such analysis. Generally, the results of such screening will be compounds having unique core structures; thereafter, these compounds are preferably subjected to additional chemical modification around a preferred core structure(s) to further enhance the medicinal properties thereof. Such techniques are known to those in the art and will not be addressed in detail in this patent document.




H. Pharmaceutical Compositions




Candidate compounds selected for further development can be formulated into pharmaceutical compositions using techniques well known to those in the art. Suitable pharmaceutically-acceptable carriers are available to those in the art; for example, see Remington's Pharmaceutical Sciences, 16


th


Edition, 1980, Mack Publishing Co., (Oslo et al., eds.).




I. Other Utility




Although a preferred use of the non-endogenous version of the known GPCRs disclosed herein may be for the direct identification of candidate compounds as inverse agonists, agonists or partial agonists (preferably for use as pharmaceutical agents), these versions of known GPCRs can also be utilized in research settings. For example, in vitro and in vivo systems incorporating GPCRs can be utilized to further elucidate and better understand the roles these receptors play in the human condition, both normal and diseased, as well as understanding the role of constitutive activation as it applies to understanding the signaling cascade. The value in non-endogenous known GPCRs is that their utility as a research tool is enhanced in that, because of their unique features, non-endogenous known GPCRs can be used to understand the role of these receptors in the human body before the endogenous ligand therefor is identified. Other uses of the disclosed receptors will become apparent to those in the art based upon, inter alia, a review of this patent document.




EXAMPLES




The following examples are presented for purposes of elucidation, and not limitation, of the present invention. While specific nucleic acid and amino acid sequences are disclosed herein, those of ordinary skill in the art are credited with the ability to make minor modifications to these sequences while achieving the same or substantially similar results as reported below. The traditional approach to application or understanding of sequence cassettes from one sequence to another (e.g. from rat receptor to human receptor or from human receptor A to human receptor B) is generally predicated upon sequence alignment techniques whereby the sequences are aligned in an effort to determine areas of commonality. The mutational approaches disclosed herein do not rely upon a sequence alignment approach but are instead based upon an algorithmic approach and a positional distance from a conserved proline residue located within the TM6 region of GPCRs. Once this approach is secured, those in the art are credited with the ability to make minor modifications thereto to achieve substantially the same results (i.e., constitutive activation) disclosed herein. Such modified approaches are considered within the purview of this disclosure




Example 1




Preparation of Endogenous Known GPCRS




A. Expression By Standard PCR




PCR was performed using a specific cDNA as template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides.




The resulting PCR fragment was digested with the respective restriction sites and cloned into a pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified. See Table D below:
















TABLE D












5′ Primer




3′ Primer






Receptor





Cycle Conditions




(SEQ.ID.NO.) and




(SEQ.ID.NO.) and






Identifier




Template




Min (′), Sec (″)




Restriction site




Restriction site











5HT-1A




Genomic DNA




94° for 1′




CGGAAGCTTAGC




CCGGAATTCCTG








60° C. for 1′




CATGGATGTGCT




GCGGCAGAAGTT








72° for 1′30″




CAGCCCTGGTCA




ACACTTAATG (2);









(1); HindIII




EcoRI













5HT-1B




Genomic DNA




94° for 1′




TCCAAGCTTGGG




GGCGAATTCACTT








60° C. for 1′




GCGAGGAGAGCC




GTGCACTTAAAA








72° for 1′30″




ATGGAGGA (3);




CGTATCAGTT (4);









HindIII




EcoRI













5HT-1D




Genomic DNA




94° for 1′




ATCTACCATGTC




ATAGAATTCGGA








60° C. for 1′




CCCACTGAACCA




GGCCTTCCGGAA








72° for 1′30″




GTCAGC (5)




AGGGACAA (6);










EcoRI













5HT-1E




Genomic DNA




94° for 1′




CCACAGTGTCGA




CAGTATGCTCTCG








60° C. for 1′




CTGAAACAAGGG




GCATCTAATGAG








72° for 2′10″




AAACATGAAC




(8)









(7); SalI













5HT-1E




Genomic DNA




94° for 1′




ATCACCATGGAT




TTAGGATCCACAT








60° C. for 1′




TTCTTAAATTCAT




CGACATCGCACA








72° for 2′10″




CTGATC (9)




AGCTTTTG (10);










BamHI













5HT-2B




Uterus cDNA




94° for 1′




GAAAAGCTTGCC




GTTGGATCCTACA








60° C. for 1′




ATGGCTCTCTCTT




TAACTAACTTGCT








72° for 1′30″




ACAGAGTGTCTG




CTTCAGTTT (12);









(11); HindIII




BamHI













5HT-4A




Brain cDNA




94° for 1′




ATCACCATGGAC




CCTGAATTCGAA








60° C. for 1′




AAACTTGATGCT




GCATGATTCCAG








72° for 1′30″




AATGTGAG (13)




GGATTCTGG (14);










EcoRI













5HT-4B




Brain cDNA




94° for 1′




ATCACCATGGAC




AGGGAATTCAGT








60° C. for 1′




AAACTTGATGCT




GTCACTGGGCTG








72° for 1′30″




AATGTGAG (15)




AGCAGCCAC (16);










EcoRI













5HT-4C




Brain cDNA




94° for 1′




ATCACCATGGAC




TTGGAATTCGGAT








60° C. for 1′




AAACTTGATGCT




GGTTTGGTCAATC








72° for 1′30″




AATGTGAG (17)




TTCTCTTC (18);










EcoRI













5HT-4D




5HT-4E DNA




94° for 1′




ATCACCATGGAC




AGGGAATTCAAA








60° C. for 1′




AAACTTGATGCT




TCTTAGTACATGT








72° for 2″




AATGTGAG (19)




GTGGATCCATTA










AT (20); EcoRI













5HT-4E




Brain cDNA




94° for 1′




ATCACCATGGAC




TCAGAATTCGAC








60° C. for 1′




AAACTTGATGCT




AGGAACTGGTCT








72° for 1′15″




AATGTGAG (21)




ATTGCAGAA (22);










EcoRI













5HT-5A




Brain cDNA




94° for 1′




CCTAAGCTTGCC




TCTGAATTCGTGT








60° C. for 1′




ATGGATTTACCA




TGCCTAGAAAAG








72° for 2′10″




GTGAACCTAACC




AAGTTCTTGA









TCC (23); HindIII




(24); EcoRI













5HT-6




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













5HT-7




Brain cDNA




94° C. for 1′




AGCGGAATTCGG




TTTCGGATCCATT








72° C. for 2″




CGGCGCGATGAT




GTTCTGCTTTCAA









GGACGTT (25);




TCAT (26); BamHI









EcoRI













AVPR1A




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













AVPR1A




See alternative




See alternative




See alternative




See alternative






variant




approach below




approach below




approach below




approach below













AVPR1B




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













AVPR2




IMAGE 301449




pfu PCR




CAGGAATTCAGA




AGCGGATCCCGA








94° for 1′




ACACCTGCCCCA




TGAAGTGTCCTTG








63° C. for 1′




GCCCCAC (27);




GCCAGGGA (28);








72° for 2″




EcoRI




BamHI













BBR3




Uterus cDNA




94° C. for 1′




ACAGAATTCAGA




CATGGATCCTTGA








56° C. for 1′




AGAAATGGCTCA




AAAGCTAGAAAC








72° C. for 1′20″




AAGGCA (29);




TGTCC (30); BamHI









EcoRI













BDKR1




IMAGE 1472696




pfu PCR




TGTAAGCTTCAG




GCTGGATCCATTC








94° for 1′




GTCACTGTGCAT




CGCCAGAAAAGT








65° C. for 1′




GGCATCATC (31);




TGGAAGATTTC








72° for 2″




HindIII




(32); BamHI













BDKR2




IMAGE 1682455




pfu PCR




ACTAAGCTTCCA




GTTGAATTCCTGT








94° for 1′




AATGTTCTCTCCC




CTGCTCCCTGCCC








65° C. for 1′




TGGAAGATA (33)




AGTCCTG (34);








72° for 2″




HindIII




EcoRI













C3a




Genomic DNA




94° for 1′




CAGAAGCTTAGC




ACAGGATCCCAC








65° C. for 1′




AATGGCGTCTTT




AGTTGTACTATTT








72° for 1′30″




CTCTGCTG (35);




CTTTCTGAAATG









HindIII




(36); BamHI













C5a




Thymus




94° for 1′




GGGAAGCTTAGG




TGTGAATTCCACT








65° C. for 1′




AGACCAGAACAT




GCCTGGGTCTTCT








72° for 1′10″




GAACTCCTTC




GGGCCAT (38);









(37); HindIII




EcoRI













CB1




EST 01536




pfu PCR




GGGAAGCTTTCT




TCAGAATTCCAG








94° for 1′




CAGTCATTTTGA




AGCCTCGGCAGA








65° C. for 1′




GCTCAGCC (39);




CGTGTCTGT (40);








72° for 2′30″




HindIII




EcoRI













CB2




IMAGE 1301708




pfu PCR




CAAAAGCTTCTA




GCCGAATTCGCA








94° for 1′




GACAAGCTCAGT




ATCAGAGAGGTC








60° C. for 1′




GGAATCTGA (41);




TAGATCTCTG








72° for 2″




HindIII




(42); EcoRI













CCR2b




Genomic DNA




94° for 1′




GACAAGCTTCCC




CTCGGATCCTAA








60° C. for 1′




CAGTACATCCAC




ACCAGCCGAGAC








72° for 1′10″




AACATGC (43);




TTCCTGCTC (44);









HindIII




BamHI













CCR3




Genomic DNA




94° for 1′




ATCGCCATGACA




TCTGAATTCAAAC








60° C. for 1′




ACCTCACTAGAT




ACAATAGAGAGT








72° for 1′10″




ACAGTTGAG (45)




TCCGGCTC (46);










EcoRI













CCR5




Genomic DNA




94° for 1′




GCAAAGCTTGGA




TCCGGATCCCAA








62° C. for 1′




ACAAGATGGATT




GCCCACAGATAT








72° for 1′10″




ATCAAGTGTC




TTCCTGCTC (48);









(47); HindIII




BamHI













CCR8




Genomic DNA




94° for 1′




TGAAAGCTTCCC




TGAGAATTCCAA








60° C. for 1′




GCTGCCTTGATG




AATGTAGTCTAC








72° for 1′10″




GATTATAC (49);




GCTGGAGGAA









HindIII




(50); EcoRI













CCR9




Genomic DNA




94° for 1′




ATCACCATGACA




GACGAATTCGAG








60° C. for 1′




CCCACAGACTTC




GGAGAGTGCTCC








72° for 1′10″




ACAAGCCCTATT




TGAGGTTGT (52);









CCTAACATGGCT




EcoRI









GATGACTATGG









(51)













CRFR1




Pituitary cDNA




94° for 1′




ATCACCATGGGA




CGGGAATTCGAC








65° C. for 1′




GGGCACCCGCAG




TGCTGTGGACTGC








72° for 1′20″




CTCCGT (53)




TTGATGCT (54);










EcoRI













CXCR4




Genomic DNA




94° for 1′




ATCACCATGGAG




TCTGAATTCGCTG








65° C.




GGGATCAGTATA




GAGTGAAAACTT








72° for 1′




TACACTTCAGAT




GAAGACTCAG









AACTACACCGAG




(56); EcoRI









GAAATG (55)













Dopamine




See alternative




See alternative




See alternative




See alternative






D1




approach below




approach below




approach below




approach below













Dopamine




See alternative




See alternative




See alternative




See alternative






D2




approach below




approach below




approach below




approach below













Dopamine




Brain cDNA




94° C. for 1′




AAGAAGCTTGGC




GGCTCTAGAAAT






D3





62° for 1′20″




ATCACGCACCTC




GGGTACAAAGAG








72° C. for 1′20″




CTCTGG(57);




TGTT (58);









HindIII




XbaI













Dopamine




Genomic DNA




See alternative




See alternative




See alternative






D5





approach below




approach below




approach below













ETA




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













ETB




IMAGE 1086987




pfu PCR




CGGAAGCTTCTG




CTTGGATCCAGAT








94° for 1′




GAGCAGGTAGCA




GAGCTGTATTTAT








60° C. for 1′




GCATG (59);




TACTGGAACG








72° for 2′20″




HindIII




(60); BamHI













FPR1




IMAGE 2153284




94° C. for 1′




ATCACCATGGAG




CCCGAATTCCTTT








63° for 1′




ACAAATTCCTCT




GCCTGTAACTCCA








72° C. for 2′30″




CTCCCC (61)




CCTCTGC (62);










EcoRI













FPRL1




Genomic DNA




94° C. for 1′




GCAAAGCTTGCT




CCAGAATTCCATT








65° for 1′




GCTGGCAAGATG




GCCTGTAACTCA








72° C. for 1′10″




GAAACCAAC (63);




GTCTCTGC (64);









HindIII




EcoRI













GALR1




Stomach cDNA




94° C. for 1′




CCGGAATTCGCC




GCAGGATCCTTAT








60° for 1′20″




GGGACAGCCCCG




CACACATGAGTA








72° C. for 1′20″




CGGGCC (65);




CAATTGGT (66);









EcoRI




BamHI













GALR2




Hippocampus




94° C. for 1′




GGCGAATTCGGG




GTGGGATCCCAG







cDNA




62° for 1′20″




GTCAGCGGCACC




CGCGCCCGCTAA








72° C. for 1′20″




ATGAACG (67);




GTGCT (68); BamHI









EcoRI













GIP




Brain cDNA




94° for 1′




CAGAAGCTTCGC




CGCGAATTCGCA








65° C. for 1′




CGCCCTCACGAT




GTAACTTTCCAAC








72° for 1′30″




GACTAC (69);




TCCCGGCT (70);









HindIII




EcoRI













mGluR1




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













GPR5




Genomic DNA




94° C. for 1′




TATGAATTCAGA




TCCGGATCCACCT








64° for 1′




TGCTCTAAACGT




GCACCTGCGCCT








72° C. for 1′30″




CCCTGC (71);




GCACC (72); BamHI









EcoRI













GPR24 (also




See alternative




See alternative




See alternative




See alternative






known as




approach below




approach below




approach below




approach below






MCH or






SLC-1)













GRPR




Stomach cDNA




94° C. for 1′




AGGAAGCTTTTA




CCGGAATTCAAG








56° for 1′20″




GGTGGGAAAAA




GGGCAAAATCAA








65° C. for 1′20″




AAATCTA (73);




GGGTCAA (74);









HindIII




EcoRI













M1




Genomic DNA




94° C. for 1′




GCCAAGCTTAGC




GGAGAATTCGCA








60° for 1′




CACCATGAACAC




TTGGCGGGAGGG








72° C. for 1′50″




TTCAGCCC (75);




AGTGCGGTG (76);









HindIII




EcoRI













M2




Genomic DNA




94° C. for 1′




ATCACCATGAAT




GATGAATTCCCTT








60° for 1′




AACTCAACAAAC




GTAGCGCCTATGT








72° C. for 1′50″




TCCTCTAAC (77)




TCTTATA (78);










EcoRI













M3




Genomic DNA




94° C. for 1′




ATCACCATGACC




CTCGAAATTCCA








60° for 1′




TTGCACAATAAC




AGGCCTGCTCGG








72° C. for 1′50″




AGTACAAC (79)




GTGCGCGCT (80);










EcoRI













M4




Genomic DNA




94° C. for 1′




ATCACCATGGCC




GCCGAATTCCCTG








60° for 1′




AACTTCACACCT




GCAGTGCCGATG








72° C. for 1′50″




GTCAA (81)




TTCCGATA (82);










EcoRI













M5




Genomic DNA




94° C. for 1′




ATCACCATGGAA




GACGGATCCGGG








60° for 1′




GGGGATTCTTAC




TAGCTTGCTGTTC








72° C. for 1′50″




CACAAT (83)




CCCTGCCA (84);










BamHI













MC3




Genomic DNA




94° C. for 1′




CAGGAATTCTGA




AATGGATCCTATC








54° for 1′30″




CAGCAATGAATG




CCAAGTTCATGCC








72° C. for 1′20″




CTTCGT (85);




GTTGCAG (86);









EcoRI




BamHI













NK1R




Brain cDNA




94° C. for 1′




AGTAAGCTTTAC




TGTGAATTCGGA








65° for 1′




GCCTAGCTTCGA




GAGCACATTGGA








72° C. for 1′50″




AATGGAT (87);




GGAGAAGCT (88);









HindIII




EcoRI













NK2R




Uterus cDNA




94° C. for 1′




TCCAAGCTTAGA




AACGAATTCAAT








65° for 1′




AGCAGCCATGGG




TTCAACATGAGTT








72° C. for 1′50″




GACCTGTGACA




TTGGTGGGGG









(89); HindIII




(90); EcoRI













NK3R




Brain cDNA




94° C. for 1′




ATCTGCAGACCG




ATGGGATCCAGA








65° for 1′20″




GTGGCGATGGCC




ATATTCATCCACA








72° C. for 1′20″




ACT (91)




GAGGTATAGG










(92); BamHI













NMBR




Brain cDNA




94° C. for 1′




TGAGAATTCCAG




GTTGGATCCAGG








65° for 1′20″




CGGACTCTGCTG




TAGTGAGTTGAA








72° C. for 1′20″




GAAAGGA (93);




TGGCCA (94);









EcoRI




BamHI













NPY5




Genomic DNA




94° C. for 1′




GGAAAGCTTCAA




GGAGGATCCAGT








54° for 1′30″




GAAAGACTATAA




GAGAATTATTAC








72° C. for 1′20″




TATGGAT (95);




ATATGAAG (96);









HindIII




BamHI













NTSR1




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













NTSR2




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













OPRD




Brain cDNA




94° C. for 1′




CGGAAGCTTGCA




GCCGAATTCGGC








65° for 1′




GCCATGGAACCG




GGCAGCGCCACC








72° C. for 1′15




GCCCCCTCC (97);




GCCGGGACC (98);









HindIII




EcoRI













OPRL1




Brain cDNA




94° C. for 1′




AGTAAGCTTGCA




GCCGAATTCTGC








65° for 1′




GGGCAGTGGCAT




GGGCCGCGGTAC








72° C. for 1′15″




GGAGCCC (99);




CGTCTCAGA (100);









HindIII




EcoRI













OPRK




Brain cDNA




94° C. for 1′




TTTAAGCTTGCA




CTACTGGTTTATT








65° for 1′




GCACTCACCATG




CATCCCATCGATG








72° C. for 1′15″




GAATCCCCGAT




TC (102);









(101); HindIII













OPRM




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













OPRM1A




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













OX


1


R




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













OX


2


R




Brain cDNA




94° C. for 1′




ACCAAGCTTGAG




CAGGGATCCTTGT








65° for 1′




CCCGTGATGTCC




CATATGAATAAA








72° C. for 1′20″




GGCACC (103);




TATT (104); BamHI









HindIII













PACAP




Fetal Brain cDNA




94° C. for 1′




AGTAAGCTTGGC




CATGAATTCGGT








65° for 1′




CAAGAAGTGTCA




GGCCAGATTGTC








72° C. for 1′30″




TGGCTGGTG




AGCAGGGAG









(105); HindIII




(106); EcoRI













PAF




Genomic DNA




94° C. for 1′




CTGAAGCTTCCA




CAGGAATTCATTT








63° for 1′




GCCCACAGCAAT




TTGAGGGAATTG








72° C. for 2′30″




GGAGCCA (107);




CCAGGGATCTG









HindIII




(108); EcoRI













PGE EP1




cDNA clone




pfu PCR




ATCGCCATGAGC




TTGGAATTCGAA








94° C. for 1′




CCTTGCGGGCCC




GTGGCTGAGGCC








63° for 1′




CTCAA (109)




GCTGTGCCG (110);








72° C. for 2′30″





EcoRI













PGE EP2




Thymus cDNA




94° C. for 1′




GCAAAGCTTTTC




CTGGAATTCAAG








63° for 1′




CAGGCACCCCAC




GTCAGCCTGTTTA








72° C. for 2′30″




CATGGGC (111);




CTGGCATC (112);









HindIII




EcoRI













PGE EP4




cDNA clone




pfu PCR




ATCATCATGTCC




TGCGAATTCTATA








94° C. for 1′




ACTCCCGGGGTC




CATTTTTCTGATA








60° for 1′




AAT (113)




AGTTCAGTGTT








72° C. for 2′30″





(114); EcoRI













PTHR1




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













PTHR2




Brain cDNA




94° C. for 1′




CTGAAGCTTCCT




CGAGAACATCCT








65° for 1′




ACAGCCGTTCCG




CAGTTTCTCCTTG








72° C. for 1′50″




GGCATG (115);




G (116)









HindIII













SCTR




Small Intestine




94° C. for 1′




GGGAAGCTTGCG




AGCGAATTCGAT








65° for 1′




GGCACCATGCGT




GATGCTGGTCCTG








72° C. for 1′45″




CCCCACCT (117);




CAGGTGCC (118);









HindIII




EcoRI













SST1




Genomic DNA




94° C. for 1′




GCCGAATTCAGC




CAGGGATCCTGC








65° for 1′20″




TGGGATGTTCCC




GTGGCCCGGGCT








72° C. for 1′20″




CAATGGC (119);




CAGAGCG (120);









EcoRI




BamHI













SST2




See alternative




See alternative




See alternative




See alternative







approach below




approach below




approach below




approach below













SST3




Genomic DNA




94° C. for 1′




ACGGAATTCCCC




TGGGATCCCCAG








65° for 1′20″




TCAGCCATGGAC




GCCCCTACAGGT








72° C. for 1′20″




ATGCTTC (121);




AGCTG (122);









EcoRI




BamHI













SST4




Genomic DNA




94° C. for 1′




GCCGAATTCAGC




GAGGGATCCACG








65° for 1′20″




TGCCCTGCGCCG




CAGGGTGGGTAG








72° C. for 1′20″




GCACCCC (123);




GGGAAGG (124);









EcoRI




BamHI













SST5




Genomic DNA




94° C. for 1′




TCTAAGCTTGCA




CCTGAATTCCTGG








65° for 1′20″




GAGCCTGACGCA




GGGTGACACGGG








72° C. for 1′20″




CCCCAG (125);




GCCGCC (126);









HindIII




EcoRI













TSHR




Genomic DNA




94° C. for 1′




GGCGAATTCGGA




GTAGGATCCCCT








65° for 1′




GGATGGAGAAAT




ACCATTGTGAGT








72° C. for 2′30″




AGCCCC (127);




AGTGTA (128);









EcoRI




BamHI













VIPR1




Lung cDNA




94° C. for 1′




CCGAAGCTTCAG




TGGGAATTCGAC








65° for 1′




GGCAGACCATGC




CAGGGAGACTTC








72° C. for 1′30″




GCCCGCCA (129);




GGCTTGGAA









HindIII




(130); EcoRI













VIPR2




Brain cDNA




94° C. for 1′




GCTAAGCTTGCC




GTGGAATTCGAT








65° for 1′




ATGCGGACGCTG




GACCGAGGTCTC








72° C. for 1′30″




CTGCCTCCCGCG




CGTTTGCAG (132);









(131); HindIII




EcoRI














B. Expression by Alternative Approaches




1. AVPR1A




The endogenous human AVPR1A was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. The cycle condition was 30 cycles of 94° C. for 1 min, 64° C. for 1 min and 72° C. for 1 min and 30 sec. The 5′ PCR fragment was obtained utilizing genomic DNA, as a template, and the following primer set:













(SEQ.ID.NO.:133)















5′-ATCACCATGCGTCTCTCCGCCGGTCCCGA-3′ and





















(SEQ.ID.NO.:134)















5′-TTGTTCACCTCGATCATGGAGAAGA-3′.












The 3′ PCR fragment was obtained by pfu polymerase (Stratagene) using IMAGE 1055179, as a template, and the following primer set:













(SEQ.ID.NO.:135)















5′-CGCAGTACTTCGTCTTCTCCATGA-3′ and





















(SEQ.ID.NO.:136)















5′-CAAGAATTCAGTTGAAACAGGAATGAATTTGATGG-3′.












The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 60° C. and 72° C. for 1 min 30 sec. The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase and SEQ. ID. NO.:133 and SEQ. ID. NO.:136 as primers. The cycle condition for each PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. and 72° C. for 2 min 10 sec.




The resulting PCR fragment was digested with EcoRI restriction site and cloned into an EcoRI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




2. AVPR1A Variant




The endogenous human AVPR1A variant was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. The cycle condition was 30 cycles of 94° C. for 1 min, 64° C. for 1 min and 72° C. for 1 min and 30 sec. The 5′ PCR fragment was obtained utilizing genomic DNA, as a template, and: SEQ. ID. NO.:133 and SEQ. ID. NO.:134 as primers.




The 3′ PCR fragment was obtained by pfu polymerase (Stratagene) using IMAGE 1542469, as a template, and SEQ. ID. NO.:136 and 5′-ACAGAATTCTCCAGTTCTCATTTTCTTATCCGTAC-3′ (SEQ. ID. NO.:137).




The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min 30 sec. The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and SEQ. ID. NO.:133 and SEQ. ID. NO.:136 as primers. The cycle condition for each PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 2 min 10 sec.




The resulting PCR fragment was digested with EcoRI restriction site and cloned into an EcoRI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified. 3. AVPR1B




The endogenous human AVPR1B was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. Both rounds of PCR had the following cycle condition: 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 2 sec. The first round of PCR utilized a pituitary DNA, as a template, and a 5′ PCR primer that contained a HindIII site with the following sequence: 5′-GCAAAGCTTGCTCATGGATTCTGGGCCTCT-3′ (SEQ. ID. NO.:138) The 3′ PCR primer contained an EcoRI site with the following sequence: 5′-TCTGAATTCAAAGATGATGGTCTCAGCGGTGCC-3′-(SEQ. ID. NO.:139). The second round of PCR utilized pituitary DNA as a template and a 5′ PCR primer contained a HindIII site with the following sequence: 5′-GCAAAGCTTGCTCATGGATTCTGGGCCTCTGTGGG-3′ (SEQ. ID. NO.:140) and the 3′ PCR primer contained an EcoRI site with the following sequence: 5′-TCTGAATTCAAAGATGATGGTCTCAGCGGTGCCTTCCC-3′ (SEQ. ID. NO.:141).




The resulting PCR fragment was digested with HindIII and EcoRI restriction site and cloned into a HindIII-EcoRI pCMN expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




4. 5HT6




The endogenous human 5HT6 receptor was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. Both rounds of PCR had the following cycle condition: 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 1 min and 45 sec. The first round of PCR utilized a caudate nucleus DNA, as a template, and a 5′ PCR primer that contained a HindIII site with the following sequence: 5′-CATAAGCTTTCCCGCCACCCTATCACT-3′ (SEQ. ID. NO.:142) The 3′ PCR primer contained an EcoRI site with the following sequence: 5′-ACTGAATTCTGCTCAATCCAGCTCCCCA-3′-(SEQ. ID. NO.:143). The second round of PCR also utilized caudate nucleus DNA as a template and a 5′ PCR primer that contained an EcoRV site with the following sequence: 5′-CCTCGGATATCATGGTCCCAGAGCCGGGCCC-3′ (SEQ. ID. NO.:144) and a 3′ PCR primer that contained a XbaI site with the following sequence: 5′-CAGCTCTAGATTGGCCAGCCCCAAGCCCGGGT-3′ (SEQ. ID. NO.:145).




Nucleic acid and amino acid sequences were thereafter determined and verified.




5. Dopamine D1




Dopamine D1 was subcloned from a full length cDNA clone obtained from the American Type Culture Collection.




6. Dopamine D2




Dopamine D2 was subcloned from a full length cDNA clone obtained from the American Type Culture Collection.




7. Dopamine D5




To obtain Dopamine D5, PCR was performed using genomic cDNA as template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides.




Dopamine D5 receptor contained no intron in the coding region. However, Dopamine D5 receptor contained two pseudogenes with 8 bp fame shift insertion within the coding region. In order to avoid the pseudogenes, the DNA fragment 5′ and 3′ of the frame shift insert was each amplified from genomic DNA. The 5′ PCR fragment was obtained utilizing the following primer set:













(SEQ.ID.NO.:146; sense)    













5′-CCTGAATTCCAGCCCGAAATGCTGCCGCCAG-3′




















(SEQ.ID.NO.:147; antisense)













5′-GGTCCACGCTGATGACGCACAGGTTC-3′












3′ fragment was obtained utilizing the following primer set:













(SEQ.ID.NO.: 148; sense)    













5′-GAACCTGTGCGTCATCAGCGTGGACC-3′




















(SEQ.ID.NO.:149; antisense)













5′-TGCGGATCCATGAGGGGGTTTCTTAATG-3′.












The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase and SEQ. ID. NO.:146 and SEQ. ID. NO.:149 as primers. The cycle condition for each PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 2 min 30 sec and 72° C. for 1 min 30 sec.




The resulting PCR fragment was digested with EcoRI and Bamboo restriction sites and cloned into an EcoRI-BamHI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




8. ETA




The endogenous human ETA was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. The cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 2 sec. The 5′ PCR fragment, containing a HindIII site, was obtained utilizing genomic DNA, as a template, and the following primer set:













(SEQ.ID.NO.:150)















5′-CGGAAGCTTCTGGAGCAGGTAGCAGCATG-3′ and





















(SEQ.ID.NO.:151)















5′-TGGGCAATAGTTGTGCATTGAGCCA-3′.












The 3′ PCR fragment, containing BamHI site, was obtained by pfu polymerase (Stratagene) using IMAGE 666747, as a template, and the following primer set:













(SEQ.ID.NO.:152)















5′-CTAATTTGGTCCTACCCAGCAATGGC-3′ and





















(SEQ.ID.NO.:153)















5′-CTTGGATCCAGATGAGCTGTATTTATTACTGGAACG-3′.












The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 64° C. for 1 min and 72° C. for 2 sec. The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and the following primers:













(SEQ ID.NO.:154)















5′-AATAAGCTTCAAGATGGAAACCCTTTGCCTCAG-3′





















(SEQ.ID.NO.:155)















5′-CGTTCATGCTGTCCTTATGGCTGCTC-3′.












The PCR cycle condition for the full length clone was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 2 min 10 sec.




The resulting PCR fragment was digested with EcoRI restriction site and cloned into an EcoRI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




9. mGluR1




The endogenous human mGluR1 was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer. The cycle condition for the first round of PCR was as follows: 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 50 sec. The 5′ PCR fragment contained a SalI site and was obtained utilizing hippocampus DNA as a template, and the following primer set:













(SEQ.ID.NO.:156)















5′-GCAGGCTGTCGACCTCGTCCTCACCACCATGGTC-3′ and





















(SEQ.ID.NO.:157)















5′-AATGGGCTCACAGCCTGTTAGATCTGCATTGGGCCAC-3′.












The middle PCR fragment was obtained utilizing genomic DNA as a template, where the cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 50 sec, with the following primer set:













(SEQ.ID.NO.:158)















5′-TAACAGGCTGTGAGCCCATTCCTGTGCG-3′ and





















(SEQ.ID.NO.:159)















5′-TTAGAATTCGCATTCCCTGCCCCTGCCTTCTTTC-3′.












The 3′ PCR fragment contained a BamHI site and was obtained utilizing genomic cDNA, as a template, and the following primer set:













(SEQ.ID.NO.:160)















5′-TGCGAATTCTAATGGCAAGTCTGTGTCATGGTC-3′ and





















(SEQ.ID.NO.:161)















5′-TCCGGATCCCAGGGTGGAAGAGCTTTGCTTGTA-3′.












The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 15 sec.




The resulting PCR fragment was digested with SalI and BamHI restriction site and cloned into a SalI-BamHI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




10. GPR24 (Also Known as MCH or SLC-1)




The endogenous human GPR24 was obtained by PCR using genomic DNA as template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. The cycle condition was 30 cycles of 94° C. for 1 min, 56° C. for 1 min and 72° C. for 1 min and 20 sec.




The 5′ PCR primer contained a HindIII site with the sequence: 5′-GTGAAGCTTGCCTCTGGTGCCTGCAGGAGG-3′ (SEQ. ID. NO.:162) and the 3′ primer contained an EcoRI site with the sequence: 5′-GCAGAATTCCCGGTGGCGTGTTGTGGTGCCC-3′ (SEQ. ID. NO.:163).




The 1.3 kb PCR fragment was digested with HindIII and EcoRI and cloned into HindIII-EcoRI site of CMVp expression vector. Later the cloning work by Lakaye et al showed that there is an intron in the coding region of the gene. Thus the 5′ end of the cDNA was obtained by 5′ RACE PCR using Clontech's marathon-ready hypothalamus cDNA as template and the manufacturer's recommended protocol for cycling condition. The 5′ RACE PCR for the first and second round PCR were as follows:














5′-CATGAGCTGGTGGATCATGAAGGG-3′




(SEQ.ID.NO.:164)







and













5′-ATGAAGGGCATGCCCAGGAGAAAG-3′.




(SEQ.ID.NO.:165)











Nucleic acid and amino acid sequences were thereafter determined and verified.




11. NTSR1




The endogenous human NTSR1 was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer, 0.25 μM of each primer, and 0.2 mM of each 4 nucleotides. The cycle condition was 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 1 min and 10 sec. The 5′ PCR fragment, containing a HindIII site, was obtained utilizing genomic DNA, as a template, and the following primer set:













(SEQ.ID.NO.:166)















5′-CCCAAGCTTCCAGCCCCGGAGGCGCCGGAC-3′ and





















(SEQ.ID.NO.:167)















5′-TGAAGGTGTTGACCTGTATGACGACCTTGACGGTGGG-3′.












The 3′ PCR fragment, containing an EcoRI site, was obtained utilizing brain cDNA, as a template, and the following primer set:













(SEQ.ID.NO.:168)















5′-GGTCGTCATACAGGTCAACACCTTCATGTCCTTCATA-3′ and





















(SEQ.ID.NO.:169)















5′-CACGAATTCGTACAGCGTCTCGCGGGTGGCATT-3′.












The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 1 min and 10 sec. The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and 5′-ATCACCATGCGCCTCAACAGCTCCGC-3′ (SEQ. ID. NO.:170) and SEQ. ID. NO.:169 as primers. The cycle condition for each PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 2 min 10 sec.




The resulting PCR fragment was digested with HindIII and EcoRI restriction site and cloned into a HindIII-EcoRI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




12. NTSR2




The endogenous human NTSR2 was obtained by PCR using a template and pfu polymerase (Stratagene) with the buffer system provided by the manufacturer. The cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 15 sec. The 5′ PCR fragment was obtained utilizing IMAGE 1537523, as a template, and the following primer set:













(SEQ.ID.NO.:171)















5′-ATCACCATGGAAACCAGCAGCCCGCGGC-3′ and





















(SEQ.ID.NO.:172)















5′-CGGGGTAGAAGTGGACGGCACTTGGG-3′.












The 3′ PCR fragment, containing an EcoRI site, was obtained utilizing caudate nucleus cDNA, as a template, and the following primer set:













(SEQ.ID.NO.:173)















5′-GCTCCCAAGTGCCGTCCACTTCTACC-3′ and





















(SEQ.ID.NO.:174)















5′-TTAGAATTCGGTCCGGGTTTCTGGGGGATCC-3′.












The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 1 min and 20 sec. The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and SEQ. ID. NO.:171 and SEQ. ID. NO.:174 as primers. The PCR cycle condition for the full length clone was 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 2 min 10 sec.




The resulting PCR fragment was digested with EcoRI restriction site and cloned into an EcoRI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




13. OPRM1




The endogenous human OPRM1 was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer. The cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 40 sec. The 5′ PCR fragment, containing a HindIII site, was obtained utilizing genomic DNA as a template, and the following primer set:













(SEQ.ID.NO.:175)















5′-CCCAAGCTTCAGTACCATGGACAGCAGCGCTGCC-3′ and





















(SEQ.ID.NO.:176)















5′-CATCTTGGTGTATCTGACAATCACATACATGACCAGGAA-3′.












The middle PCR fragment was obtained utilizing genomic DNA as a template, where the cycle condition was 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 40 sec, and the following primer set:













(SEQ.ID.NO.:177)












5′-GTATGTGATTGTCAGATACACCAAGATGAAGACTGCCAC-3′






and



















(SEQ.ID.NO.:178)












5′-TACAATCTATGGAACCTTGCCTGTATTTTGTTGTAGCCA-3′.











The 3′ PCR fragment was obtained utilizing brain cDNA, as a template, and the following primer set:













(SEQ.ID.NO.:179)












5′-CAAAATACAGGCAAGGTTCCATAGATTGTACACTAACAT-3′ and



















(SEQ.ID.NO.:180)












5′-CGGGCAACGGAGCAGTTTCTGCTTCAG-3′.











The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 63° C. for 1 min and 72° C. for 1 min and 15 sec.




The 5′PCR fragment and the middle PCR fragment were used as templates to obtain the 5′-region through the middle region of OPRM1 (“5′-middle PCR fragment”) using the pfu polymerase (Stratagene) and SEQ. ID. NO.:175 and SEQ. ID. NO.:178 with the cycle conditions as follows: 30 cycles of 94° C. for 1 min, 63° C. for 1 min and 72° C. for 1 min and 15 sec.




The 5′-middle PCR fragment and 3′ PCR fragment were then used as templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and SEQ. ID. NO.:175 and SEQ. ID. NO.:180 as primers. The cycle condition for the full length PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min 15 sec.




The resulting PCR fragment was digested with Hindi restriction site and cloned into a HindIII pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




14. OPRM1A




The endogenous human OPRM1A was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer. The cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 40 sec. The 5′ PCR fragment, containing a HindIII site, was obtained utilizing genomic DNA as a template, and SEQ. ID. NO.:175 and SEQ. ID. NO.:176.




The middle PCR fragment was obtained utilizing genomic DNA as a template, where the cycle condition was 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 40 sec, and SEQ. ID. NO.:177 and SEQ. ID. NO.:178.




The 3′ PCR fragment was obtained utilizing genomic DNA as a template, and SEQ. ID. NO.:179 and SEQ. ID. NO.:180. The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 60° C. for 1 min and 72° C. for 1 min and 30 sec.




The 5′PCR fragment and the middle PCR fragment were used as co-templates to obtain the 5′-region through the middle region of OPRM1A (“5′-middle PCR fragment”) using the pfu polymerase (Stratagene) and SEQ. ID. NO.:175 and SEQ. ID. NO.:178 with the cycle conditions as follows: 30 cycles of 94° C. for 1 min, 63° C. for 1 min and 72° C. for 1 min and 15 sec.




The 5′-middle PCR fragment and 3′ PCR fragment were then used as co-templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and SEQ. ID. NO.:175 and SEQ. ID. NO.:180 as primers. The cycle condition for the full length PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min 15 sec.




The resulting PCR fragment was digested with HindIII restriction site and cloned into a HindIII pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




15. OX


1


R




The OX


1


R EST clone 40608 is a full length cDNA clone. However, it contained a 4 bp frame shift insertion. To remove the insert, the fragments 5, and 3, of the frame shift insert was each obtained by PCR using EST clone 40608 as template and two primer pairs. The 5′ primer set, containing an EcoRI site, were as follows:













(SEQ.ID.No.:181; sense)    














5′-ATGGAATTCTGCTGCAGCGGCTCCTGAGCTC-3′




















(SEQ.ID.No.:182; antisense)














5′-ACGGACACAGCCTGTAGATAGGGGATGACCTTGCAG-3′











and the 3′ primer set, containing a BamHI site, were as follows:













(SEQ.ID.NO.:183; sense)    












5′-ATCCCCTATCTACAGGCTGTGTCCGTGTCAGTGGCAG-3′



















(SEQ.ID.NO.:184; antisense)












5′-GGAGGATCCAGGGCAGCCCTCGCTCAGGGC-3′.











The 5′ and 3, PCR fragments were then used as cotemplates to obtain the full length cDNA using SEQ. ID. NO.:181 and SEQ. ID. NO.:184 as primers. The cycle condition for each PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 2 min 30 sec and 72° C. for 1 min 30 sec.




The resulting PCR fragment was digested with EcoRI and BamHI restriction sites and cloned into an EcoRI-BamHI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




16. PTHR1




The endogenous human PTHR1 was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer. The cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 30 sec. The 5′ PCR fragment, containing a HindIII site, was obtained utilizing kidney cDNA, as a template, and the following primer set:













(SEQ.ID.NO.:185)















5′-CGCAAGCTTAGGCGGTGGCGATGGGGACCGCC-3′ and





















(SEQ.ID.NO.:186)















5′-GGATGTGGTCCCATTCCGGCAGACAG-3′.












The 3′ PCR fragment, containing an EcoRI site, was obtained by pfu PCR (Stratagene) and IMAGE 1624048, as a template, and the following primer set:













(SEQ.ID.NO.:187)















5′-AGGAGGCACCCACTGGCAGCAGGTA-3′ and





















(SEQ.ID.NO.:188)















5′-GCCGAATTCCATGACTGTCTCCCACTCTTCCTG-3′.












The cycle condition for 3′ PCR reaction was as follows: 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 30 sec. The 5′ and 3′ PCR fragments were then used as co-templates to obtain the full length cDNA using the pfu polymerase (Stratagene) and SEQ. ID. NO.:185 and SEQ. ID. NO.:188 as primers. The PCR cycle condition for the full length clone was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 3 sec.




The resulting PCR fragment was digested with HindIII and EcoRI restriction site and cloned into a HindIII-EcoRI pCMV expression vector. Nucleic acid and amino acid sequences were thereafter determined and verified.




17. SST2




SST2 was obtained by subcloning EST 06818 into a pCMN vector.




Table E below indicates the GenBank Accession number for which the endogenous receptors set forth above can be located, and for which the endogenous nucleic and amino acid sequences are provided.













TABLE E









Receptor Identifier




GenBank Accession Number











5HT-1A




X13556






5HT-1B




D10995






5HT-1D




M81589






5HT-1E




M91467






5HT-1F




L04962






5HT-2B




X77307






5HT-4A




Y08756






5HT-4B




Y12505






5HT-4C




Y12506






5HT-4D




Y12507






5HT-4E




AJ011371






5HT-5A




X81411






5HT6




L41147






5HT7




L21195






AVPR1A




AF030625






AVPR1B




D31833






AVPR2




NM_000054






BBR3




X76498






BDKR1




AJ238044






BDKR2




NM_000623






C3a




U62027






C5a




M62505






CB1




X54937






CB2




X74328






CCR2b




U03882






CCR3




U28694






CCR5




U54994






CCR8




U45983






CCR9




AJ132337






CRFR1




L23332






CXCR4




AJ224869






Dopamine D1




X55758






Dopamine D2




S62137






Dopamine D3




U32499






Dopamine D5




M67439






ETA




X61950






ETB




L06623






FPR1




M60627






FPRL1




M76672






GALR1




L34339






GALR2




AF040630






GALR3




AF073799






GIP




U39231






mGluR1




L76627






GPR5




L36149






GPR24 (also known as MCH or SLC-1)




U71092






GRPR




M73481






M1




X15263






M2




X15264






M3




X15266






M4




X15265






M5




M80333






MC3




L06155






NK1R




M74290






NK2R




M57414






NK3R




M89473






NMBR




M73482






NPY5




U94320






NTSR1




X70070






NTSR2




Y10148






OPRD




U07882






OPRL1




X77130






OPRK




U11053






OPRM




L25119






OPRM1A




L25119






OX


1


R




AF041243






OX


2


R




AF041245






PACAP




D17516






PAF




S56396






PGE EP1




L22647






PGE EP2




U19487






PGE EP4




NM_000958






PTHR1




L04308






PTHR2




U25128






SCTR




U28281






SST1




M81829






SST2




M81830






SST3




M96738






SST4




D16826






SST5




D16827






TSHR




AF035261






VIPR




L13288






VIPR2




X95097














Example 2




Preparation of Non-Endogenous, Versions of the Known GPCRS




A. Site-Directed Mutagenesis




Those skilled in the art are credited with the ability to select techniques for mutation of a nucleic acid sequence. Presented below are approaches utilized to create non-endogenous versions of several of the human GPCRs disclosed above. The mutations disclosed below are based upon an algorithmic approach whereby the 16


th


amino acid (located in the IC3 region of the GPCR) from a conserved proline residue (located in the TM6 region of the GPCR, near the TM6/IC3 interface) is mutated, most preferably to a lysine amino acid residue.




In most of the examples of this Example 2, the algorithmic approach set forth above was used to identify the amino acid residue to be mutated. However, several GPCRs set forth below utilized a modified algorithmic approach (e.g., CRFR1, GIP, mGluR1, GPR24, PTHR1, PTHR2, SCTR, TSHR, VIPR and VIPR2). This modified approach focuses on a conserved proline residue (also located in the TM6 region of the GPCR, near the TM6/IC3 interface) whereby the 5


th


amino acid upstream from the proline is generally, but not always, a threonine residue. For these receptors, the endogenous 5


th


amino acid residue is mutated, most preferably to a proline amino acid residue.




Other mutation approaches can be used (e.g., mGluR1, GPR24 and TSHR) and one skilled in the art is credited with the ability to select techniques for mutation of a nucleic acid sequence. The importance here is that the mutation leads to a constitutively activated receptor and given the extension approaches set forth herein for determination of constitutively activity, routine analysis can be employed in this context.




Preparation of non-endogenous known GPCRs is preferably accomplished by using TRANSFORMER SITE-DIRECTED™ Mutagenesis Kit (Stratagene, according to manufacturer's instructions) or QUIKCHANGE SITE-DIRECTED™ Mutagenesis (Clontech). Endogenous GPCR is preferably used as a template and two mutagenesis primers utilized, as well as, most preferably, a lysine mutagenesis oligonucleotide and a selection marker oligonucleotide (SEQ. ID. NO.:252; included in Stratagene's kit). For convenience, the codon mutation incorporated into the known GPCR and the respective oligonucleotides are noted, in standard form (Table F):















TABLE F











5′-3′ orientation (sense),







Receptor




Codon




(SEQ.ID.NO.) mutation




5′-3′ orientation (antisense)






Identifier




Mutation




underlined




(SEQ.ID.NO.)











5HT-1A




V343K




CGAGAGAGGAAGACA


AAG






ATGCCCAGCGTCTT


CTT


T








AAGACGCTGGGCAT (189)




GTCTTCCTCTCTCG (190)













5HT-1B




T313K




GGGAGCGCAAAGCC


AAG


A




GATCCCTAGGGTCTT


CTT










AGACCCTAGGGATC (191)




GGCTTTGCGCTCCC (192)













5HT-1D




T300K




CGAGAAAGGAAAGCC


AAG






GAATGATGCCCAGGATT








AAAATCCTGGGCATCATTC




TT


CTT


GGCTTTCCTTTCT








(193)




CG(194)













5HT-1E




A290K




AGGGAACGGAAGGCA


AAA






AGCCCCAGGATGCG


TTT










CGCATCCTGGGGCT (195)




TGCCTTCCGTTCCCT









(196)













5HT-1F




A292K




CAAGAGAACGGAAAGCA


A






GATTAATCCCAGGGTAG










AG


ACTACCCTGGGATTAAT




T


CTT


TGCTTTCCGTTCTC








C(197)




TTG(198)













5HT-2B




S323K




AACGAACAGAGAGCC


AAA






CAATCCCTAGGACCTT


TT










AAGGTCCTAGGGATTG






T


GGCTCTCTGTTCGTT








(199)




(200)













5HT-4A




A258K




GGACAGAGACCAAAGCA


A






GATGCACAGGGTCTT


CTT












AG


AAGACCCTGTGCATC




TGCTTTGGTCTCTGTCC








(201)




(202)













5HT-4B




A258K




GGACAGAGACCAAAGCA


A






GATGCACAGGGTCTT


CTT












AG


AAGACCCTGTGCATC




TGCTTTGGTCTCTGTCC








(203)




(204)













5HT-4C




A258K




GGACAGAGACCAAAGCA


A






GATGCACAGGGTCTT


CTT












AG


AAGACCCTGTGCATC




TGCTTTGGTCTCTGTCC








(205)




(206)













5HT-4D




A258K




GGACAGAGACCAAAGCA


A






GATGCACAGGGTCTT


CTT












AG


AAGACCCTGTGCATC




TGCTTTGGTCTCTGTCC








(207)




(208)













5HT-4E




A258K




GGACAGAGACCAAAGCA


A






GATGCACAGGGTCTT


CTT












AG


AAGACCCTGTGCATC




TGCTTTGGTCTCTGTCC








(209)




(210)













5HT-5A




A284K




AAGGAGCAGCGGGCC


AAG






GATGCCCACCATGAG


CT










CTCATGGTGGGCATC (211)






T


GGCCCGCTGCTCCTT









(212)













5HT-6




S267K




CTGAAGGCC


AAG


CTTACGCT




ATGCCCAGCGTAAG


CTT


G








GGGCATCCTGCTGGGCA




GCCTTCAGGGCCTTCCTG








(213)




CT (214)













5HT-7




A326K




GAACAGAAAGCA


AAG


ACCA




CCCAGGGTGGT


CTT


TGCT








CCCTGGGGATCATCGT (215)




TTCTGTTCTCGCTTAAA









(216)













AVPR1A




V290K




GCCAAGATCCGCACG


AAG


A




CGATCACAAAAGTCATCT








AGATGACTTTTGTGATCG




T


CTT


CGTGCGGATCTTGG








(217)




C(218)













AVPR1B




V280K




GGCCAAGATCCGAACA


AAG






CGATGACAAAGGTCATCT








AAGATGACCTTTGTCATC




T


CTT


TGTTCGGATCTTGG








(219)




CC (220)













AVPR2




V270K




GCTGTGGCCAAGACT


AAG


A




CACTAGCGTCATCCT


CTT










GGATGACGCTAGTG (221)




AGTCTTGGCCACAGC









(222)













BBR3




270K




CGAAAGAGAATT


AAA


AGAA




AATACCGTTCT


TTT


AATT








CGGTATTGGTGTTG (223)




CTCTTTCGGGATTC (224)













BDKR1




T249K




GCCGCAAGGATAGCAAGAC




GTGAGGATCAGCG


CTT


TG








C


AAA


GCGCTGATCCTCAC




GTCTTGCTATCCTTGCGG








(225)




C (226)













BDKR2




T269K




CGGAGAGGAGGGCC


AAG


GT




ACCAGGACTAGCAC


CTT


G








GCTAGTCCTGGT (227)




GCCCTCCTCTCCG (228)













C3a




F376K




CGCCAAGTCTCAGAGCAAA




CACCACGGCCACTCG


CTT










ACC


AAG


CGAGTGGCCGTGG




GGTTTTGCTCTGAGACTT








TG (229)




GGCG (230)













C5a




L241K




CGGTCCACCAAGACA


AAG


A




TGCCACCACCACCTT


CTT










AGGTGGTGGTGGCA (231)




TGTCTTGGTGGACCG









(232)













CB1




A342K




CGCATGGACATTAGGTTA


A






TCAGGACCAGGGTCTT


CT












AG


AAGACCCTGGTCCTGA






T


TAACCTAATGTCCATGC








(233)




G (234)













CB2




A244K




GGCTGGATGTGAGGTTG


AA






CACTAGCCCTAGGGTCTT










G


AAGACCCTAGGGCTAGTG






CTT


CAACCTCACATCCAG








(235)




CC (236)













CCR2b




V242K




GAAGAGGCATAGGGC


AAA


G




GGTGAAGATGACTCT


CTT










AGAGTCATCTTCACC (237)




TGCCCTATGCCTCTTC









(238)













CCR3




I238K




GTAAAAAAAAGTACAAGGC




GATGACAAAAATGAGCC








C


AAG


CGGCTCATTTTTGTCA




G


CTT


GGCCTTGTACTTTTT








TC (239)




TTTAC (240)













CCR5




V234K




GAAGAGGCACAGGGCT


AAG






GATGGTGAAGATAAGCC








AGGCTTATCTTCACCATC




T


CTT


AGCCCTGTGCCTCT








(241)




TC (242)













CCR8




I237K




CCACAACAAGACCAAGGCC




CCACAATGAGCACCAAC










AAG


AGGTTGGTGCTCATTGT




CT


CTT


GGCCTTGGTCTTG








GG (243)




TTGTGG (244)













CCR9




L253K




TCCAAGCACAAAGCC


AAA


A




GGACAGTGATGGTCACTT








AAGTGACCATCACTGTCC




TT


TTG


GCTTTGTGCTTGG








(245)




A (246)













CRFR1




T316P




GAAGGCTGTGAAAGCC


CCT






GCAGCAGCACCAG


AGG


G








CTGGTGCTGCTGC (247)




GCTTTCACAGCCTTC (248)













CXCR4




L238K




AGAAGCGCAAGGCC


AAG


AA




TGAGGATGACTGTGGTCT








GACCACAGTCATCCTCA




T


CTT


GGCCTTGCGCTTCT








(249)




(250)













Dopamine D1




L271K




GAGAAACTAAAGTC


AAG


AA




CTCCTTCGGTCCTCCTAT








GACTCTGTG (251)




CGTTGTCAGAAGT (252)













Dopamine D2




T372K




GAGAAGAAAGCC


AAT


CAGA




GGCGAGCATCTGAGTGG








TGCTCGCC (253)




CTTTCTTCTC (254)













Dopamine D3




T328K




GAGAAGAAGGCA


AAA


CAAA




GGCCACCATTTGTTTTGC








TGGTGGCC (255)




CTTCTTCTC (256)













Dopamine D5




L295K




AAGAAGGAGACCAAAGTT


A






CGACAGGGTCTT


TTT


AAC










AA


AAGACCCTGTCG (257)




TTTGGTCTCCTTCTT (258)













ETA




A305K




CAGCGTCGAGAAGTG


AAA


A




TACAACCAAGCAGAAAA








AAACAGTTTTCTGCTTGGTT




CTGTTTT


TTT


CACTTCTCG








GTA (259)




ACGCTG (260)













ETB




A322K




CAGAGACGGGAAGTG


AAG


A




CCAGGCAAAAGACGGTT








AAACCGTCTTTTGCCTGG




TT


CTT


CACTTCCCGTCTCT








(261)




G(262)













FPR1




L240K




AAGTCCAGTCGTCCC


AAA


C




AAGGAGAGGACCCG


TTT










GGGTCCTCTCCTT (263)




GGGACGACTGGACTT









(264)













FPRL1




L240K




AAATCCAGCCGTCCC


AAA


C




GCAGTGAGGACCCG


TTT


G








GGGTCCTCACTGC (265)




GGACGGCTGGATTT (266)













GALR1




A246K




CCAAGAAAAAGACT


AAA


CA




CTCCTTCGGTCCTCCTAT








GACAGTTCTGG (267)




CGTTGTCAGAAGT (252)













GALR2




T235K




GCCAAGCGCAAGGTG


AAA


C




GAGGATCATGCG


TTT


CAC








GCATGATCCTC (268)




CTTGCGCTTGGCG (269)













GIP




T343P




AGGCTGGCTCGCTCC


CCG


CT




GCACCAGCGTCAG


CGG


G








GACGCTGGTGC (270)




GAGCGAGCCAGCCT (271)













mGluR1




3′ Deletion




See alternative approach below




See alternative approach









below













GPR5




V224K




CGGCGCCACCGCACG


AAA


A




CTCCTTCGGTCCTCCTAT








AGCTCATCTTC (272)




CGTTGTCAGAAGT (252)













GPR24 (also




T255K




See alternative approach below




See alternative approach






known as MCH




T255K/T257R





below






or SLC-1)




24-IC3-SST2







C305Y







P271L







W269C







W269F







W269L







F265I







I261Q







D140N













GRPR




A263K




GGAAGCGACTT


AAG


AAGAC




CAGCACTGTCTT


CTT


AAG








AGTGCTGGTGTTT (273)




TCGCTTCCGGGATTC (274)













M1




A364K




AAGGAGAAGAAGGCG


AAA


C




GGCACTCAGGGTCCG


TTT










GGACCCTGAGTGCC (275)




CGCCTTCTTCTCCTT (276)













M2




T386K




CCGGGAAAAGAAAGTC


AAG






AGCCAAGATTGTCCT


CTT










AGGACAATCTTGGCT (277)




GACTTTCTTTTCCCGG









(278)













M3




A490K




GGTCAAGGAGAAGAAAGCG




CGCACTGAGGGTCTG


TTT












AAA


CAGACCCTCAGTGCG




CGCTTTCTTCTCCTTGACC








(279)




(280)













M4




T399K




GGGAGCGCAAAGTG


AAA


CG




GGCAAAGATCGTTCG


TTT










AACGATCTTTGCC (281)




CACTTTGCGCTCCC (282)













M5




A441K




GTCAAAGAGAGGAAAGCA


A






GGCACTCAGTGTCTG


TTT












AA


CAGACACTGAGTGCC




TGCTTTCCTCTCTTTGAC








(283)




(284)













MC3




A241K




GCAACACTCATGTATGAAG




CTCCTTCGGTCCTCCTAT








GGG


AAA


GTCACCATCACC




CGTTGTCAGAAGT (252)








(285)













NK1R




V247K




GCCAAGCGCAAGGTG


AAG


A




GACAATCATCATTTT


CTT










AAATGATGATTGTC (286)




CACCTTGCGCTTGGC









(287)













NK2R




V249K




GCCAAGAAGAAGTTT


AAG


A




AGCACCATGGTCTT


CTT


A








AGACCATGGTGCT (288)




AACTTCTTCTTGGC (289)













NK3R




V298K




GGCCAAAAGAAAGGTT


AAG






CAATAATCATCATTTT


CT










AAAATGATGATTATTG (290)






T


AACCTTTCTTTTGGCC









(291)













NMBR




A265K




CACGGAAACGCCTG


AAA


AA




CAAGCACAATTTT


TTT


CA








AATTGTGCTTG (292)




GGCGTTTCCGTG (293)













NPY5




F367K




GAATAAAAAAGAGATCACG




GGTCAGTCTGTA


CTT


AAC








AAGTGTT


AAG


TACAGACTG




ACTTCGTGATCTCTTTTTT








ACC (294)




AT (295)













NTSR1




V302K




GCCCTGCGGCACGGC


AAG


C




GCACGTAGGACGCG


CTT


G








GCGTCCTACGTGC (296)




CCGTGCCGCAGGGC (297)













NTSR2




V269K




AGCCTCCAGCGCAGC


AAG


C




GGCTCTGAGAACCTG


CTT










AGGTTCTCAGAGCC (298)




GCTGCGCTGGAGGCT









(299)













OPRD




T260K




GCCTGCGGCGCATC


AAG


CG




ACCAGCACCATGCG


CTT


G








CATGGTGCTGGT (300)




ATGCGCCGCAGGC (301)













OPRL1




T262K




ACCTGCGGCGCATC


AAG


CG




CACCAGCACCAGCCG


CTT










GCTGGTGCTGGTG (302)




GATGCGCCGCAGGT (303)













OPRK




T273K




ACCTGCGTAGGATC


AAG


AG




CACCAGGACCAGTCT


CTT










ACTGGTCCTGGTG (304)




GATCCTACGCAGGT (305)













OPRM




T281K




GGGAATCTTCGAAGGATC


A






CACCAGCACCATCCT


CTT












AG


AGGATGGTGCTGGTG




GATCCTTCGAAGATTCC








(306)




(307)













OPRM1A




T281K




GGGAATCTTCGAAGGATC


A






CACCAGCACCATCCT


CTT












AG


AGGATGGTGCTGGTG




GATCCTTCGAAGATTCC








(308)




(309)













OX


I


R




A297K




CGGAGGAAGACA


AAA


AAGA




CCATCAGCATCTT


TTT


TG








TGCTGATGG (310)




TCTTCCTCCG (311)













OX


2


R




A303K




CCAGAAGGAAAACA


AAA


CG




CTCCTTCGGTCCTCCTAT








GATGTTGATG (312)




CGTTGTCAGAAGT (252)













PACAP




T355K




CGACTGGCCCGGTCC


CCC


CT




GGATGAGCAGCAG


GGG


G








GCTGCTCATCC (313)




GACCGGGCCAGTCG (314)













PAF




L231K




GTCAAGCGCCGGGCG


AAG


T




GTGCACACCATCCA


CTT


C








GGATGGTGTGCAC (315)




GCCCGGCGCTTGAC (316)













PGE EP1




V296K




CACGACGTGGAGATG


AAG


G




CCGACAAGCTGGCC


CTT


C








GCCAGCTTGTCGG (317)




ATCTCCACGTCGTG (318)













PGE EP2




L263K




GAGGAGACGGACCAC


AAG


A




CATGATAGCCAGGAGAA








TTCTCCTGGCTATCATG (319)




T


CTT


GTGGTCCGTCTCCT









C (320)













PGE EP4




V271K




GCCGAGATCCAGATG


AAG


A




GGTGGCAATGAGTAAGA








TCTTACTCATTGCCACC (321)




T


CTT


CATCTGGATCTCGG









C (322)













PTHR1




T410P




GGAAGCTGCTCAAATCC


CC






GCATGAGCACCAG


CGG


G










G


CTGGTGCTCATGC (323)




GATTTGAGCAGCTTCC









(324)













PTHR2




T365P




GGAAACTGGCCAAATCG


CC






GGACCAGGACCAG


TGG


C










A


CTGGTCCTGGTCC (325)




GATTTGGCCAGTTTCC









(326)













SCTR




T344P




CGCCTGGCCAGGTCC


CCT


CT




GGATCAGCAGGAG


AGG


G








CCTGCTGATCC (327)




GACCTGGCCAGGCG (328)













SST1




T270K




CGAGCGCAAGATC


AAA


TTA




CTCCTTCGGTCCTCCTAT








ATGGTGATGG (329)




CGTTGTCAGAAGT (252)













SST2




T255K




AGAAGAAGGTC


AAA


CGAAT




GGACACCATTCG


TTT


GAC








GGTGTCCATCGTG (330)




CTTCTTCTCAGACT (331)













SST3




T256K




GAACGCAGGGTC


AAG


CGCA




CTCCTTCGGTCCTCCTAT








TGGTGGTGGCC (332)




CGTTGTCAGAAGT (252)













SST4




T258K




CGGAGAAGAAAATCA


AAA


G




CTCCTTCGGTCCTCCTAT








GCTGGTGCTG (333)




CGTTGTCAGAAGT (252)













SST5




T247K




TCGGAGCGAAAGGTG


AAG


C




ACCATGCG


CTT


CACCTTT








GCATGGTGTTGGTGGT (334)




CGCTCCGAGCGCCGCCG









(335)













TSHR




V509A




See alternative approach below




See alternative approach







D619G





below







A623I







A623K







C672Y







D619G/A623K







V509A/C672Y







V509A/A623K/C672Y













VIPR




T343P




AGGCTAGCCAGGTCC


CCA


CT




GGATCAGCAGGAG


TGG


G








CCTGCTGATCC (336)




GACCTGGCTAGCCT (337)













VIPR2




T330P




AGGCTGGCCAAGTCC


CCG


CT




GGATAAGCAGGAG


CGG


G








CCTGCTTATCC (338)




GACTTGGCCAGCCT (339)














B. Alternative Approaches to Mutation




1. mGluR1




Preparation of a non-endogenous version of the human mGluR1 receptor was accomplished by deleting a portion of the intracellular region at the 3′ end. The non-endogenous human mGluR1 was obtained by PCR using a template and rTth polymerase (Perkin Elmer) with the buffer system provided by the manufacturer. The cycle condition for the first round of PCR was as follows: 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 50 sec. The 5′ PCR fragment contained a SalI site and was obtained utilizing hippocampus DNA as a template, and the following primer set:













(SEQ.ID.NO.:340)















5′-GCAGGCTGTCGACCTCGTCCTCACCACCATGGTC-3′ and





















(SEQ.ID.NO.:341)















5′-AATGGGCTCACAGCCTGTTAGATCTGCATTGGGCCAC-3′.












The middle PCR fragment was obtained utilizing genomic DNA as a template, where the cycle condition was 30 cycles of 94° C. for 1 min, 65° C. for 1 min and 72° C. for 1 min and 50 sec, with the following primer set:













(SEQ.ID.NO.:342)















5′-TAACAGGCTGTGAGCCCATTCCTGTGCG-3′ and





















(SEQ.ID.NO.:343)















5′-TTAGAATTCGCATTCCCTGCCCCTGCCTTCTTTC-3′.












The 3′ PCR fragment was obtained by utilizing the endogenous mGluR1 clone as a co-template to obtain the full length cDNA using the pfu polymerase. The cycle condition for this PCR reaction was 30 cycles of 94° C. for 1 min, 65° C. for 2 min 30 sec and 72° C. for 1 min 30 sec. and the following primer set:













(SEQ.ID.NO.:344)















5′-TGCGAATTCTAATGGCAAGTCTGTGTCATGGTC-3′ and





















(SEQ.ID.NO.:345)















5′-TGCGGATCCTCTTCGGAAGATGTTGAGGAAAGTG-3′.












(See, SEQ. ID. NO.:346 for nucleic acid sequence and SEQ. ID. NO.:347 for amino acid sequence).




2. GPR24 (MCH or SLC-1)




Preparation of non-endogenous versions of the human GPR24 receptor was accomplished by creating an T255K mutation (see, SEQ. ID. NO.:350 for nucleic acid sequence, SEQ. ID. NO.:351 for amino acid sequence), a T255K/T257R mutation (see, SEQ. ID. NO.:354 for nucleic acid sequence, SEQ. ID. NO.:355 for amino acid sequence), an 24-IC3-SST3 mutation (see, SEQ. ID. NO.:358 for nucleic acid sequence, SEQ. ID. NO.:359 for amino acid sequence), a C305Y mutation (see, SEQ. ID. NO.:362 for nucleic acid sequence, SEQ. ID. NO.:363 for amino acid sequence), a P271L mutation (see, SEQ. ID. NO.:366 for nucleic acid sequence, SEQ. ID. NO.:367 for amino acid sequence), a W269C mutation (see, SEQ. ID. NO.:370 for nucleic acid sequence, SEQ. ID. NO.:371 for amino acid sequence), a W269F mutation see, SEQ. ID. NO.:374 for nucleic acid sequence, SEQ. ID. NO.:375 for amino acid sequence), and a W269L mutation (see, SEQ. ID. NO.:378 for nucleic acid sequence, SEQ. ID. NO.:379 for amino acid sequence), a F265I mutation see, SEQ. ID. NO.:382 for nucleic acid sequence, SEQ. ID. NO.:383 for amino acid sequence), an I261Q mutation see, SEQ. ID. NO.:386 for nucleic acid sequence, SEQ. ID. NO.:387 for amino acid sequence), and a D140N mutation see, SEQ. ID. NO.:390 for nucleic acid sequence, SEQ. ID. NO.:391 for amino acid sequence).




A. T255K Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an T255K mutation (see, SEQ. ID. NO.:350 for nucleic acid sequence, and SEQ. ID. NO.:351 for amino acid sequence). Mutagenesis was performed using Transformer Site-Directed Mutagenesis Kit (Clontech) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-AGAGGGTG


AAA


CGCACAGCCATCGCCATCTG-3′ (SEQ. ID. NO.:348) and the antisense primer (selection marker) had the following sequence: 5′-CTCCTTCCGGTCCTCCTATCGTTGTCAGAAGT-3′ (SEQ. ID. NO.:349). The endogenous GPR24 cDNA was used as a template.




B. T255K/T257R Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an T255K/T257R mutation (see, SEQ. ID. NO.:354 for nucleic acid sequence, and SEQ. ID. NO.:355 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-AGAGGGTG


AAA


CG


CAG


AGCCATCGCCATCTG-3′ (SEQ. ID. NO.:352) and the antisense primer had the following sequence: 5′-CAGATGGCGATGGC


TCT


GCG


TTT


CACCCTCT-3′ (SEQ. ID. NO.:353). The endogenous GPR24 cDNA was used as a template.




C. 24-IC3-SST2 Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating a 24-IC3-SST2 mutation (see; SEQ. ID. NO.:358 for nucleic acid sequence, and SEQ. ID. NO.:359 for amino acid sequence). Blast result showed that GPR24 had the highest sequence homology to SST2. Thus the IC3 loop of GPR24 was replaced with that of SST2 to see if the chimera would show constitutive activity.




The BamHI-BstEII fragment containing IC3 of GPR24 was replaced with synthetic oligonucleotides that contained the IC3 of SST2. The PCR sense mutagenesis primer used had the following sequence:














5′-GATCCTGCAGAAGGTGAAGTCCTCTGGAATCCGAGTGGGCTCCTCTAAGAGGAAGAAGTCTGAGAAGAAG-3′




(SEQ.ID.NO.:356)












and the antisense primer had the following sequence:














5′-GTGACCTTCTTCTCAGACTTCTTCCTCTTAGAGGAGCCCACTCGGATTCCAGAGGACTTCACCTTCTGCAG-3′.




(SEQ.D.NO.:357)












The endogenous GPR24 cDNA was used as a template.




D. C305Y Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an C305Y mutation (see, SEQ. ID. NO.:362 for nucleic acid sequence, and SEQ. ID. NO.:363 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-GGCTATGCCAACAGC


TAC


CTCAACCCCTTTGTG-3′ (SEQ. ID. NO.:360) and the antisense primer had the following sequence: 5′-CACAAAGGGGTTGAG


GTA


GCTGTTGGCATAGCC-3′ (SEQ. ID. NO.:361). The endogenous GPR24 cDNA was used as a template.




E. P271L Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an P271L mutation (see, SEQ. ID. NO.:366 for nucleic acid sequence, and SEQ. ID. NO.:367 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-TTGTGTGCTGGGCA


CTC


TACTATGTGCTACAGC-3′ (SEQ. ID. NO.:364) and the antisense primer had the following sequence: 5′-GCTGTAGCACATAGTA


GAG


TGCCCAGCACACAA-3′ (SEQ. ID. NO.:365). The endogenous GPR24 cDNA was used as a template.




F. W269C Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an W269C mutation (see, SEQ. ID. NO.:370 for nucleic acid sequence, and SEQ. ID. NO.:371 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-GGTCTTCTTTGTGTGC


TGC


GCACCCTACTATGTG-3′ (SEQ. ID. NO.:368) and the antisense primer had the following sequence: 5′-CACATAGTAGGGTGC


GCA


GCACACAAAGAAGACC-3′ (SEQ. ID. NO.:369). The endogenous GPR24 cDNA was used as a template.




G. W269F Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an W269F mutation (see, SEQ. ID. NO.:374 for nucleic acid sequence, and SEQ. ID. NO.:375 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-GGTCTTCTTTGTGTGC


TTC


GCACCCTACTATGTG-3′ (SEQ. ID. NO.:372) and the antisense primer had the following sequence: 5′-CACATAGTAGGGTGC


GAA


GCACACAAAGAAGACC-3′ (SEQ. ID. NO.:373). The endogenous GPR24 cDNA was used as a template.




H. W269L Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an W269L mutation (see, SEQ. ID. NO.:378 for nucleic acid sequence, and SEQ. ID. NO.:379 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-GGTCTTCTTTGTGTGC


TTG


GCACCCTACTATGTG-3′ (SEQ. ID. NO.:376) and the antisense primer had the following sequence: 5′-CACATAGTAGGGTGC


CAA


GCACACAAAGAAGACC-3′ (SEQ. ID. NO.:377). The endogenous GPR24 cDNA was used as a template.




I. F265I Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an F265 I mutation (see, SEQ. ID. NO.:382 for nucleic acid sequence, and SEQ. ID. NO.:383 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-GCCATCTGTCTGGTC


ATC


TTTGTGTGCTGGG-3′ (SEQ. ID. NO.:380) and the antisense primer had the following sequence: 5′-CCCAGCACACAAA


GAT


GACCAGACAGATGGC-3′ (SEQ. ID. NO.:381). The endogenous GPR24 cDNA was used as a template.




J. I261Q Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an I 261Q mutation (see, SEQ. ID. NO.:386 for nucleic acid sequence, and SEQ. ID. NO.:387 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-CGCACAGCCATCGCC


CAG


TGTCTGGTCTTCTTTGTG-3′ (SEQ. ID. NO.:384) and the antisense primer had the following sequence: 5′-CACAAAGAAGACCAGACA


CTG


GGCGATGGCTGTGCG-3′ (SEQ. ID. NO.:385). The endogenous GPR24 cDNA was used as a template.




K. D140N Mutation




Preparation of a non-endogenous version of the human GPR24 receptor was accomplished by creating an D140N mutation (see, SEQ. ID. NO.:390 for nucleic acid sequence, and SEQ. ID. NO.:391 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-ACCGCCATGGCCATT


AAC


GCGTACCTGGCCACT-3′ (SEQ. ID. NO.:388) and the antisense primer had the following sequence: 5′-AGTGGCCAGGTAGCG


GTT


AATGGCCATGGCGGT-3′ (SEQ. ID. NO.:389). The endogenous GPR24 cDNA was used as a template.




3. TSHR




Preparation of non-endogenous versions of the human TSHR receptor were accomplished by creating an V509A mutation (see, SEQ. ID. NO.:394 for nucleic acid sequence, SEQ. ID. NO.:395 for amino acid sequence), a D619G mutation (see, SEQ. ID. NO.:398 for nucleic acid sequence, SEQ. ID. NO.:399 for amino acid sequence), an A623I mutation (see, SEQ. ID. NO.:402 for nucleic acid sequence, SEQ. ID. NO.:403 for amino acid sequence), a A623K mutation (see, SEQ. ID. NO.:406 for nucleic acid sequence, SEQ. ID. NO.:407 for amino acid sequence), an C672Y mutation (see, SEQ. ID. NO.:410 for nucleic acid sequence, SEQ. ID. NO.:411 for amino acid sequence), a D619G/A623K mutation (see, SEQ. ID. NO.:414 for nucleic acid sequence, SEQ. ID. NO.:415 for amino acid sequence), an V509A/C672Y mutation see, SEQ. ID. NO.:418 for nucleic acid sequence, SEQ. ID. NO.:419 for amino acid sequence), and an V509A/A623K/C672Y mutation (see, SEQ. ID. NO.:422 for nucleic acid sequence, SEQ. ID. NO.:423 for amino acid sequence).




A. V509A Mutation




Preparation of a non-endogenous version of the human TSHR receptor was accomplished by creating an V509A mutation (see, SEQ. ID. NO.:394 for nucleic acid sequence, and SEQ. ID. NO.:395 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-CAAGCGAGTTATCG


GCA


TATACGCTGACGGTC-3′ (SEQ. ID. NO.:392) and the antisense primer had the following sequence: 5′-GACCGTCAGCGTATA


TGC


CGATAACTCGCTTG-3′ (SEQ. ID. NO.:393). The endogenous TSHR cDNA was used as a template. This V509A mutant can be differentiated from the endogenous version by the absence of an AccI site near the mutation site.




B. D619G Mutation




Preparation of a non-endogenous version of the human TSHR receptor was also accomplished by creating a D619G mutation (see, SEQ. ID. NO.:398 for nucleic acid sequence, and SEQ. ID. NO.:399 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-ACCCAGGGGACAAA


GGT


ACCAAAATTGCCAA-3′ (SEQ. ID. NO.:396) and the antisense primer had the following sequence: 5′-TTGGCAATTTTGGT


ACC


TTTGTCCCCTGGGT-3′ (SEQ. ID. NO.:397). The endogenous TSHR cDNA was used as a template. This D619G mutant can be differentiated from the endogenous version by the presence of a KpnI site near the mutation site.




C. A623I Mutation




Preparation of a non-endogenous version of the human TSBR was accomplished by creating an A623I mutation (see, SEQ. ID. NO.:402 for nucleic acid sequence, and SEQ. ID. NO.:403 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-AAAGATACCAAAATT


ATC


AAGAGGATGGCTGT-3′ (SEQ. ID. NO.:400) and the antisense primer had the following sequence: 5′-ACAGCCATCCTCTT


GAT


AATTTTGGTATCTTT-3′ (SEQ. ID. NO.:401). The endogenous TSHR cDNA was used as a template. This A623I mutant can be differentiated from the endogenous version by the absence of a BstXI site near the mutation site.




D. A623K Mutation




Preparation of a non-endogenous version of the human TSHR receptor was also accomplished by creating a A623K mutation (see, SEQ. ID. NO.:406 for nucleic acid sequence, and SEQ. ID. NO.:407 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-AAAGATACCAAAATT


AAG


AAGAGGATGGCTGTG-3′ (SEQ. ID. NO.:404) and the antisense primer had the following sequence: 5′-CACAGCCATCCT


CTT


CTTAATTTTGGTATCTTT-3′ (SEQ. ID. NO.:405). The endogenous TSHR cDNA was used as a template. This A623K mutant can be differentiated from the endogenous version by the absence of a BstXI site near the mutation site.




E. C672Y Mutation




Preparation of a non-endogenous version of the human TSHR receptor was also accomplished by creating a C672Y mutation (see, SEQ. ID. NO.:410 for nucleic acid sequence, and SEQ. ID. NO.:411 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence: 5′-CTATCCACTTAACTCG


TAC


GCCAATCCATTCCTC-3′ (SEQ. ID. NO.:408) and the antisense primer had the following sequence: 5′-GAGGAATGGATTGGC


GTA


CGAGTTAAGTGGATAG-3′ (SEQ. ID. NO.:409). The endogenous TSIR cDNA was used as a template. This C672Y mutant can be differentiated from the endogenous version by the presence of a BsiWI site near the mutation site.




F. D619G/A623K Mutation




Preparation of a non-endogenous version of the human TSHR receptor was also accomplished by creating a D619G/A623K mutation (see, SEQ. ID. NO.:414 for nucleic acid sequence, and SEQ. ID. NO.:415 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The PCR sense mutagenesis primer used had the following sequence:












(SEQ.ID.NO.:412)











5′-ACCCAGGGGACAAA


GGT


ACCAAAATT


AAG


AAGAGGATGGCTGTG-3′











and the antisense primer had the following sequence: 5′-CACAGCCATCCTCTT


CTT


AATTTTGGT


ACC


TTTGTCCCCTGGGT-3′ (SEQ. ID. NO.:413). The non-endogenous D619G mutant version of TSHR cDNA was used as a template. This D619G/A623K mutant can be differentiated from the endogenous version by the presence of a KpnI site near the D619G mutation site and absence of a BstXI site near the A623K mutation site.




G. V509A/C672Y Mutation




Preparation of a non-endogenous version of the human TSHR receptor was also accomplished by creating a V509A/C672Y mutation (see, SEQ. ID. NO.:418 for nucleic acid sequence, and SEQ. ID. NO.:419 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The V509A sense mutagenesis primer used had the following sequence: 5′-CAAGCGAGTTATCGGCATATACGCTGACGGTC-3′ (SEQ. ID. NO.:416) and the C672Y antisense primer had the following sequence: 5′-GAGGAATGGATTGGCGTACGAGTTAAGTGGATAG-3′ (SEQ. ID. NO.:417). The endogenous TSHR cDNA was used as a template. This V509A/C672Y mutant can be differentiated from the endogenous version by the absence of an AccI site near the V509A mutation site and presence of a BsiWI site near the C672Y mutation site.




H. V509A/A623K/C672Y Mutation




Preparation of a non-endogenous version of the human TSHR receptor was also accomplished by creating a V509A/A623K/C672Y mutation (see, SEQ. ID. NO.:422 for nucleic acid sequence, and SEQ. ID. NO.:423 for amino acid sequence). Mutagenesis was performed using QuikChange Site-Directed Mutagenesis Kit (Stratagene) according to the manufacturer. The A623K sense mutagenesis primer used had the following sequence: 5′-AAAGATACCAAAATTAAGAAGAGGATGGCTGTG-3′ (SEQ. ID. NO.:420) and the A623K antisense primer had the following sequence: 5′-CACAGCCATCCTCTTCTTAATTTTGGTATCTTT-3′ (SEQ. ID. NO.:421). The non-endogenous V509A/C672Y mutant version of TSHR cDNA was used as a template. This V509A/A623K/C672Y mutant can be differentiated from the endogenous version by the absence of an AccI site near the V509A mutation site, absence of a BstXI near the A623K mutation site and the presence of a BsiWI site near the C672Y mutation 10 site.




The non-endogenous human GPCRs were then sequenced and the derived and verified nucleic acid and amino acid sequences are listed in the accompanying “Sequence Listing” appendix to this patent document, as summarized in Table G below:














TABLE G










Nucleic Acid




Amino Acid






Mutated GPCR




Sequence Listing




Sequence Listing











5HT-1A




SEQ.ID.NO.:424




SEQ.ID.NO.:425






V343K






5HT-1B




SEQ.ID.NO.:426




SEQ.ID.NO.:427






T313K






5HT-1D




SEQ.ID.NO.:428




SEQ.ID.NO.:429






T300K






5HT-1E




SEQ.ID.NO.:430




SEQ.ID.NO.:431






A290K






5HT-1F




SEQ.ID.NO.:432




SEQ.ID.NO.:433






A292K






5HT-2B




SEQ.ID.NO.:434




SEQ.ID.NO.:435






S323K






5HT-4A




SEQ.ID.NO.:436




SEQ.ID.NO.:437






A258K






5HT-4B




SEQ.ID.NO.:438




SEQ.ID.NO.:439






A258K






5HT-4C




SEQ.ID.NO.:440




SEQ.ID.NO.:441






A258K






5HT-4D




SEQ.ID.NO.:442




SEQ.ID.NO.:443






A258K






5HT-4E




SEQ.ID.NO.:444




SEQ.ID.NO.:445






A258K






5HT-5A




SEQ.ID.NO.:446




SEQ.ID.NO.:447






A284K






5HT-6




SEQ.ID.NO.:448




SEQ.ID.NO.:449






S267K






5HT-7




SEQ.ID.NO.:450




SEQ.ID.NO.:451






A326K






AVPR1A




SEQ.ID.NO.:452




SEQ.ID.NO.:453






V290K






AVPR1B




SEQ.ID.NO.:454




SEQ.ID.NO.:455






V280K






AVPR2




SEQ.ID.NO.:456




SEQ.ID.NO.:457






V270K






BBR3




SEQ.ID.NO.:458




SEQ.ID.NO.:459






A270K






BDKR1




SEQ.ID.NO.:460




SEQ.ID.NO.:461






T249K






BDKR2




SEQ.ID.NO.:462




SEQ.ID.NO.:463






T269K






C3a




SEQ.ID.NO.:464




SEQ.ID.NO.:465






F376K






C5a




SEQ.ID.NO.:466




SEQ.ID.NO.:467






L241K






CB1




SEQ.ID.NO.:468




SEQ.ID.NO.:469






A342K






CB2




SEQ.ID.NO.:470




SEQ.ID.NO.:471






A244K






CCR2b




SEQ.ID.NO.:472




SEQ.ID.NO.:473






V242K






CCR3




SEQ.ID.NO.:474




SEQ.ID.NO.:475






I238K






CCR5




SEQ.ID.NO.:476




SEQ.ID.NO.:477






V234K






CCR8




SEQ.ID.NO.:478




SEQ.ID.NO.:479






I237K






CCR9




SEQ.ID.NO.:480




SEQ.ID.NO.:481






L253K






CRFR1




SEQ.ID.NO.:482




SEQ.ID.NO.:483






T316P






CXCR4




SEQ.ID.NO.:484




SEQ.ID.NO.:485






L238K






Dopamine D1




SEQ.ID.NO.:486




SEQ.ID.NO.:487






L271K






Dopamine D2




SEQ.ID.NO.:488




SEQ.ID.NO.:489






T372K






Dopamine D3




SEQ.ID.NO.:490




SEQ.ID.NO.:491






T328K






Dopamine D5




SEQ.ID.NO.:492




SEQ.ID.NO.:493






L295K






ETA




SEQ.ID.NO.:494




SEQ.ID.NO.:495






A305K






ETB




SEQ.ID.NO.:496




SEQ.ID.NO.:497






A322K






FPR1




SEQ.ID.NO.:498




SEQ.ID.NO.:499






L240K






FPRL1




SEQ.ID.NO.:500




SEQ.ID.NO.:501






L240K






GALR1




SEQ.ID.NO.:502




SEQ.ID.NO.:503






A246K






GALR2




SEQ.ID.NO.:504




SEQ.ID.NO.:505






T235K






GIP




SEQ.ID.NO.:506




SEQ.ID.NO.:507






T343P






mGluR1




SEQ.ID.NO.:346




SEQ.ID.NO.:347






3′ Deletion






GPR5




SEQ.ID.NO.:508




SEQ.ID.NO.:509






V224K






GPR24 (also known






as MCH or SLC-1)






T255K




SEQ.ID.NO.:350




SEQ.ID.NO.:351






T255K/T257R




SEQ.ID.NO.:354




SEQ.ID.NO.:355






24-IC3-SST2




SEQ.ID.NO.:358




SEQ.ID.NO.:359






C305Y




SEQ.ID.NO.:362




SEQ.ID.NO.:363






P271L




SEQ.ID.NO.:366




SEQ.ID.NO.:367






W269C




SEQ.ID.NO.:370




SEQ.ID.NO.:371






W269F




SEQ.ID.NO.:374




SEQ.ID.NO.:375






W269L




SEQ.ID.NO.:378




SEQ.ID.NO.:379






F265I




SEQ.ID.NO.:382




SEQ.ID.NO.:383






I261Q




SEQ.ID.NO.:386




SEQ.ID.NO.:387






D140N




SEQ.ID.NO.:390




SEQ.ID.NO.:391






GRPR




SEQ.ID.NO.:510




SEQ.ID.NO.:511






A263K






M1




SEQ.ID.NO.:512




SEQ.ID.NO.:513






A364K






M2




SEQ.ID.NO.:514




SEQ.ID.NO.:515






T386K






M3




SEQ.ID.NO.:516




SEQ.ID.NO.:517






A490K






M4




SEQ.ID.NO.:518




SEQ.ID.NO.:519






T399K






M5




SEQ.ID.NO.:520




SEQ.ID.NO:521






A441K






MC3




SEQ.ID.NO.:522




SEQ.ID.NO.:523






A241K






NK1R




SEQ.ID.NO.:524




SEQ.ID.NO.:525






V247K






NK2R




SEQ.ID.NO.:526




SEQ.ID.NO.:527






V249K






NK3R




SEQ.ID.NO.:528




SEQ.ID.NO.:529






V298K






NMBR




SEQ.ID.NO.:530




SEQ.ID.NO.:531






A265K






NPY5




SEQ.ID.NO.:532




SEQ.ID.NO.:533






A297K






NTSR1




SEQ.ID.NO.:534




SEQ.ID.NO.:535






V302K






NTSR2




SEQ.ID.NO.:536




SEQ.ID.NO.:537






V269K






OPRD




SEQ.ID.NO.:538




SEQ.ID.NO.:539






T260K






OPRL1




SEQ.ID.NO.:540




SEQ.ID.NO.:541






T262K






OPRK




SEQ.ID.NO.:542




SEQ.ID.NO.:543






T273K






OPRM




SEQ.ID.NO.:544




SEQ.ID.NO.:545






T281K






OPRM1A




SEQ.ID.NO.:546




SEQ.ID.NO.:547






T281K






OX


1


R




SEQ.ID.NO.:548




SEQ.ID.NO.:549






F367K






OX


2


R




SEQ.ID.NO.:550




SEQ.ID.NO.:551






A297K






PACAP




SEQ.ID.NO.:552




SEQ.ID.NO.:553






T355K






PAF




SEQ.ID.NO.:554




SEQ.ID.NO.:555






L231K






PGE EP1




SEQ.ID.NO.:556




SEQ.ID.NO.:557






V296K






PGE EP2




SEQ.ID.NO.:558




SEQ.ID.NO.:559






L263K






PGE EP4




SEQ.ID.NO.:560




SEQ.ID.NO.:561






V271K






PTHR1




SEQ.ID.NO.:562




SEQ.ID.NO.:563






T410P






PTHR2




SEQ.ID.NO.:564




SEQ.ID.NO.:565






T365P






SCTR




SEQ ID.NO.:566




SEQ.ID.NO.:567






T344P






SST1




SEQ.ID.NO.:568




SEQ.ID.NO.:569






T290K






SST2




SEQ.ID.NO.:570




SEQ.ID.NO.:571






T255K






SST3




SEQ.ID.NO.:572




SEQ.ID.NO.:573






T256K






SST4




SEQ.ID.NO.:574




SEQ.ID.NO.:575






T258K






SST5




SEQ.ID.NO.:576




SEQ.ID.NO.:577






T247K






TSHR






V509A




SEQ.ID.NO.:394




SEQ.ID.NO.:395






D619G




SEQ.ID.NO.:398




SEQ.ID.NO.:399






A623I




SEQ.ID.NO.:402




SEQ.ID.NO.:403






A623K




SEQ.ID.NO.:406




SEQ.ID.NO.:407






C672Y




SEQ.ID.NO.:410




SEQ.ID.NO.:411






D619G/A623K




SEQ.ID.NO.:414




SEQ.ID.NO.:415






V509A/C672Y




SEQ.ID.NO.:418




SEQ.ID.NO.:419






V509A/A623K1C672Y




SEQ.ID.NO.:422




SEQ ID.NO.:423






VIPR




SEQ.ID.NO.:578




SEQ.ID.NO.:579






T343P






VIPR2




SEQ.ID.NO.:580




SEQ.ID.NO.:581






T330P














Assessment of constitutive activity of the non-endogenous versions of the known GPCRs can then be accomplished.




Example 3




Receptor Expression




Although a variety of cells are available to the art for the expression of proteins, it is most preferred that mammalian cells be utilized. The primary reason for this is predicated upon practicalities, i.e., utilization of, e.g., yeast cells for the expression of a GPCR, while possible, introduces into the protocol a non-mammalian cell which may not (indeed, in the case of yeast, does not) include the receptor-coupling, genetic-mechanism and secretary pathways that have evolved for mammalian systems—thus, results obtained in non-mammalian cells, while of potential use, are not as preferred as that obtained from mammalian cells. Of the mammalian cells, COS-7, Hek-293 and Hek-293T cells are particularly preferred, although the specific mammalian cell utilized can be predicated upon the particular needs of the artisan. The following approach was used for the indicated receptors, and can also be applied with respect to other receptors disclosed herein.




On day one, 2×10


4


Hek-293T cells well were plated out. On day two, two reaction tubes were prepared (the proportions to follow for each tube are per plate): tube A was prepared by mixing 20 μg DNA (e.g., pCMV vector; pCMV vector with receptor cDNA, etc.) in 1.2 ml serum free DMEM (Irvine Scientific, Irvine, Calif.); tube B was prepared by mixing 120 μl lipofectamine (Gibco BRL) in 1.2 ml serum free DMEM. Tubes A and B were admixed by inversions (several times), followed by incubation at room temperature for 30-45 min. The admixture is referred to as the “transfection mixture”. Plated Hek-293T cells were washed with 1×PBS, followed by addition of 10 ml serum free DMEM. 2.4 ml of the transfection mixture were added to the cells, followed by incubation for 4 hrs at 37° C./5% CO


2


. The transfection mixture was removed by aspiration, followed by the addition of 25 ml of DMEM/10% Fetal Bovine Serum. Cells were incubated at 37° C./5% CO


2


. After 72 hr incubation, cells were harvested and utilized for analysis.




Example 4




Assays for Determination of Constitutive Activity of Non-Endogenous GPCRS




A variety of approaches are available for assessment of constitutive activity of the non-endogenous versions of known GPCRs. The following are illustrative; those of ordinary skill in the art are credited with the ability to determine those techniques that are preferentially beneficial for the needs of the artisan.




1. Membrane Binding Assays: [


35


S]GTPγS Assay




When a G protein-coupled receptor is in its active state, either as a result of ligand binding or constitutive activation, the receptor couples to a G protein and stimulates the release of GDP and subsequent binding of GTP to the G protein. The alpha subunit of the G protein-receptor complex acts as a GTPase and slowly hydrolyzes the GTP to GDP, at which point the receptor normally is deactivated. Constitutively activated receptors continue to exchange GDP for GTP. The non-hydrolyzable GTP analog, [


35


5]GTPγS, can be utilized to demonstrate enhanced binding of [


35


S]GTPγS to membranes expressing constitutively activated receptors. The advantage of using [


35


S]GTPγS binding to measure constitutive activation is that: (a) it is generically applicable to all G protein-coupled receptors; (b) it is proximal at the membrane surface making it less likely to pick-up molecules which affect the intracellular cascade.




The assay utilizes the ability of G protein coupled receptors to stimulate [


35


S]GTPγS binding to membranes expressing the relevant receptors. The assay can, therefore, be used in the direct identification method to screen candidate compounds to known, and constitutively activated G protein-coupled receptors. The assay is generic and has application to drug discovery at all G protein-coupled receptors.




The [


35


S]GTPγS assay can be incubated in 20 mM HEPES and between 1 and about 20 mM MgCl


2


(this amount can be adjusted for optimization of results, although 20 mM is preferred) pH 7.4, binding buffer with between about 0.3 and about 1.2 nM [


35


S]GTPγS (this amount can be adjusted for optimization of results, although 1.2 is preferred) and 12.5 to 75 μg membrane protein (e.g. COS-7 cells expressing the receptor; this amount can be adjusted for optimization, although 75 μg is preferred) and 1 μM GDP (this amount can be changed for optimization) for 1 hour. Wheatgerm agglutinin beads (25 μl; Amersham) should then be added and the mixture incubated for another 30 minutes at room temperature. The tubes are then centrifuged at 1500×g for 5 minutes at room temperature and then counted in a scintillation counter.




A less costly but equally applicable alternative has been identified which also meets the needs of large scale screening. FLASH PLATES™ and WALLAC™ scintistrips may be utilized to format a high throughput [


35


S]GTPγS binding assay. Furthermore, using this technique, the assay can be utilized for known GPCRs to simultaneously monitor tritiated ligand binding to the receptor at the same time as monitoring the efficacy via [


35


S]GTPγS binding. This is possible because the Wallac beta counter can switch energy windows to look at both tritium and


35


S-labeled probes. This assay may also be used to detect other types of membrane activation events resulting in receptor activation. For example, the assay may be used to monitor


32


P phosphorylation of a variety of receptors (both G protein coupled and tyrosine kinase receptors). When the membranes are centrifuged to the bottom of the well, the bound [


35


S]GTPγS or the


32


P-phosphorylated receptor will activate the scintillant which is coated of the wells. Scinti® strips (Wallac) have been used to demonstrate this principle. In addition, the assay also has utility for measuring ligand binding to receptors using radioactively labeled ligands. In a similar manner, when the radiolabeled bound ligand is centrifuged to the bottom of the well, the scintistrip label comes into proximity with the radiolabeled ligand resulting in activation and detection.




2. Membrane-Based cAMP




A FLASH PLATE™ Adenylyl Cyclase kit (New England Nuclear; Cat. No. SMP004A) designed for cell-based assays can be modified for use with crude plasma membranes. The Flash Plate wells contain a scintillant coating which also contains a specific antibody recognizing cAMP. The cAMP generated in the wells was quantitated by a direct competition for binding of radioactive cAMP tracer to the cAMP antibody. The following serves as a brief protocol for the measurement of changes in cAMP levels in membranes that express the receptors.




Transfected cells are harvested approximately three days after transfection. Membranes were prepared by homogenization of suspended cells in buffer containing 20 mM HEPES, pH 7.4 and 10 mM MgCl


2


. Homogenization is performed on ice using a Brinkman POLYTRON™ for approximately 10 seconds. The resulting homogenate is centrifuged at 49,000×g for 15 minutes at 4° C. The resulting pellet is then resuspended in buffer containing 20 mM HEPES, pH 7.4 and 0.1 mM EDTA, homogenized for 10 seconds, followed by centrifugation at 49,000×g for 15 minutes at 4° C. The resulting pellet can be stored at −80° C. until utilized. On the day of measurement, the membrane pellet is slowly thawed at room temperature, resuspended in buffer containing 20 mM HEPES, pH 7.4 and 10 mM MgCl


2


(these amounts can be optimized, although the values listed herein are preferred), to yield a final protein concentration of 0.60 mg/ml (the resuspended membranes were placed on ice until use).




cAMP standards and Detection Buffer (comprising 2 μCi of tracer [


125


I cAMP (100 μl)] to 11 ml Detection Buffer) are prepared and maintained in accordance with the manufacturer's instructions. Assay Buffer is prepared fresh for screening and contained 20 mM HEPES, pH 7.4, 10 mM MgCl


2


, 20 mM (Sigma), 0.1 units/ml creatine phosphokinase (Sigma), 50 μM GTP (Sigma), and 0.2 mM ATP (Sigma); Assay Buffer can be stored on ice until utilized. The assay is initiated by the addition of 50 μL of assay buffer followed by addition of 50 μL of membrane suspension to the NEN Flash Plate. The resultant assay mixture is incubated for 60 minutes at room temperature followed by addition of 100 μL of detection buffer. Plates are then incubated an additional 2-4 hours followed by counting in a Wallac MicroBeta™ scintillation counter. Values of cAMP/well are extrapolated from a standard cAMP curve that is contained within each assay plate.




3. Cell-Based cAMP for Gi Coupled Target GPCRs




TSHR is a Gs coupled GPCR that causes the accumulation of cAMP upon activation. TSHR was constitutively activated by mutating amino acid residue 623 (i.e., changing an alanine residue to an isoleucine residue). See, SEQ. ID. NO.:402 for nucleic acid sequence and SEQ. ID. NO.:403 for deduced amino acid sequence. A Gi coupled receptor is expected to inhibit adenylyl cyclase, and, therefore, decrease the level of cAMP production, which can make assessment of cAMP levels challenging. An effective technique for measuring the decrease in production of cAMP as an indication of constitutive activation of a Gi coupled receptor can be accomplished by co-transfecting, most preferably, non-endogenous, constitutively activated TSHR (TSHR-A623I) (or an endogenous, constitutively active Gs coupled receptor) as a “signal enhancer” with a Gi linked target GPCR, such as GPR24, to establish a baseline level of cAMP. Upon creating a non-endogenous version of the Gi coupled receptor, this non-endogenous version of the target GPCR is then co-transfected with the signal enhancer, and it is this material that can be used for screening. We utilized such approach to effectively generate a signal when a cAMP assay is used; this approach is preferably used in the direct identification of candidate compounds against Gi coupled receptors. It is noted that for a Gi coupled GPCR, when this approach is used, an inverse agonist of the target GPCR will increase the cAMP signal and an agonist will decrease the cAMP signal.




On day one, 2×10


4


Hek-293 and Hek-293T cells/well were plated out. On day two, two reaction tubes were prepared (the proportions to follow for each tube are per plate): tube A was prepared by mixing 2 μg DNA of each receptor transfected into the mammalian cells, for a total of 4 μg DNA (e.g., pCMV vector; pCMV vector with mutated THSR (TSHR-A6231); TSHR-A623I and GPR24, etc.) in 1.2 ml serum free DMEM (Irvine Scientific, Irvine, Calif.); tube B was prepared by mixing 120 μl lipofectamine (Gibco BRL) in 1.2 ml serum free DMEM. Tubes A and B were then admixed by inversion (several times), followed by incubation at room temperature for 30-45 min. The admixture is referred to as the “transfection mixture”. Plated Hek-293 cells were washed with 1×PBS, followed by addition of 10 ml serum free DMEM. 2.4 ml of the transfection mixture was then added to the cells, followed by incubation for 4 hrs at 37° C./5% CO


2


. The transfection mixture was then removed by aspiration, followed by the addition of 25 ml of DMEM/10% Fetal Bovine Serum. Cells were then incubated at 37° C./5% CO


2


. After 24 hr incubation, cells were then harvested and utilized for analysis.




A FLASH PLATE™ Adenylyl Cyclase kit (New England Nuclear; Cat. No. SMP004A) designed for cell-based assays can be modified for use with crude plasma membranes. The Flash Plate wells can contain a scintillant coating which also contains a specific antibody recognizing cAMP. The cAMP generated in the wells can be quantitated by a direct competition for binding of radioactive cAMP tracer to the cAMP antibody. The following serves as a brief protocol for the measurement of changes in cAMP levels in whole cells that express the receptors.




Transfected cells were harvested approximately twenty four hours after transient transfection. Media was carefully aspirated and discarded. Ten milliliters of PBS was gently added to each dish of cells followed by careful aspiration. One milliliter of Sigma cell dissociation buffer and 3 ml of PBS are added to each plate. Cells were pipetted off the plate and the cell suspension is collected into a 50 ml conical centrifuge tube. Cells were then centrifuged at room temperature at 1,100 rpm for 5 min. The cell pellet was carefully re-suspended into an appropriate volume of PBS (about 3 ml/plate). The cells were then counted using a hemocytometer and additional PBS is added to give the appropriate number of cells (with a final concentration of about 50 μl/well).




cAMP standards and Detection Buffer (comprising 1 μCi of tracer [


125


I cAMP (50 μl] to 11 ml Detection Buffer) was prepared and maintained in accordance with the manufacturer's instructions. Assay Buffer should be prepared fresh for screening and contained 50 μL of Stimulation Buffer, 3 μL of test compound (12 μM final assay concentration) and 50 μL cells, Assay Buffer can be stored on ice until utilized. The assay can be initiated by addition of 50 μL of cAMP standards to appropriate wells followed by addition of 50 μL of PBSA to wells H-11 and H12. Fifty μL of Stimulation Buffer was added to all wells. Selected compounds (e.g., TSH, 100 nM MCH, MCH/TSH) were added to appropriate wells using a pin tool capable of dispensing 3 μL of compound solution, with a final assay concentration of 12 μM test compound and 100 μL total assay volume. The cells were then added to the wells and incubated for 60 min at room temperature. 100 μL of Detection Mix containing tracer cAMP was then added to the wells. Plates were then incubated additional 2 hours followed by counting in a Wallac MicroBeta scintillation counter. Values of cAMP/well were then extrapolated from a standard cAMP curve which is contained within each assay plate.





FIG. 1

evidences about a 22% decrease in cAMP production of cells co-transfected with TSHR-A623I (in the presence of TSH) and non-endogenous, constitutively activated GPR24 (“24-IC3-SST2”) (262.266 pmol cAMP/well) compared to TSHR-A623I with endogenous GPR24 (“GPR24 wt”) (336.50293 pmol cAMP/well). Co-transfection of TSHR-A623I with non-endogenous, constitutively activated GPR24 (“I261Q”) evidences about a 27% decrease in production of cAMP when compared to “GPR24 wt.” Such a decrease in cAMP production signifies that non-endogenous version of GPR24 (“I261Q”) is constitutively active. Thus, a candidate compound which impacts the GPR24 receptor by increasing the cAMP signal is an inverse agonist, while a GPR24 agonist will decrease the cAMP signal. Based upon the data generated for

FIG. 1

, 24-IC3-SST2 and I261Q are most preferred non-endogenous versions of GPR24 when used in a TSHR (constitutively activated co-transfection approach using a cAMP assay.





FIG. 2

evidences about a 60% decrease in cAMP production of cells co-transfected with TSHR-A623I (in the presence of TSH) and non-endogenous, constitutively activated GPR5 (“V224K”) (23.5 pmole cAMP/well) compared to TSHR-A623I with endogenous GPR5 (“GPR5 wt”) (58.79 pmol cAMP/well). About a 78% and about a 45% decrease in production of cAMP was evidenced when comparing TSHR-A6231 co-transfected with “V225K” and TSHR-A623I co-transfected with “GPR5 wt” against pCMV co-transfected with TSHR-A623I (106.75 pmol cAMP/well), respectively. As mentioned above, a decrease in cAMP production evidences a constitutively active GPR5. Thus, a preferred candidate compound (i.e., an inverse agonist) would likely bind the Gi coupled receptor to increase the signal of activation.




Preferably, and as noted previously, to ensure that a small molecule candidate compound is targeting the Gi coupled target receptor and not, for example, the TSHR-A623I, the directly identified candidate compound is preferably screened against the signal enhancer in the absence of the target receptor.




C. Reporter-Based Assays




1. CRE-Luc Reporter Assay (Gs-Associated Receptors)




A method to detect Gs stimulation depends on the known property of the transcription factor CREB, which is activated in a cAMP-dependent manner. A PATHDETECT™ CREB trans-Reporting System (Stratagene, Catalogue #219010) can utilized to assay for Gs coupled activity in 293 or 293T cells. Cells are transfected with the plasmids components of this above system and the indicated expression plasmid encoding endogenous or mutant receptor using a Mammalian Transfection Kit (Stratagene, Catalogue #200285) according to the manufacturer's instructions. Briefly, 400 ng pFR-Luc (luciferase reporter plasmid containing GaL4 recognition sequences), 40 ng pFA2-CREB (Ga14-CREB fusion protein containing the Ga14 DNA-binding domain), 80 ng pCMV-receptor expression plasmid (comprising the receptor) and 20 ng CMV-SEAP (secreted alkaline phosphatase expression plasmid; alkaline phosphatase activity is measured in the media of transfected cells to control for variations in transfection efficiency between samples) are combined in a calcium phosphate precipitate per the Kit's instructions. Half of the precipitate is equally distributed over 3 wells in a 96-well plate, kept on the cells overnight, and replaced with fresh medium the following morning. Forty-eight (48) hr after the start of the transfection, cells are treated and assayed for, e.g., luciferase activity.




2. 8XCRE-Luc Reporter Assay




HEK-293T cells are plated-out on 96 well plates at a density of 3×10


4


cells per well and were transfected using Lipofectamine Reagent (BRL) the following day according to manufacturer instructions. A DNA/lipid mixture is prepared for each 6-well transfection as follows: 260 ng of plasmid DNA in 100 μl of DMEM were gently mixed with 2 μl of lipid in 100 μl of DMEM (the 260 ng of plasmid DNA consisted of 200 ng of a 8xCRE-Luc reporter plasmid (see below and

FIG. 1

for a representation of a portion of the plasmid), 50 ng of pCMV comprising endogenous receptor or non-endogenous receptor or pCMV alone, and long of a GPRS expression plasmid (GPRS in pcDNA3 (Invitrogen)). The 8XCRE-Luc reporter plasmid was prepared as follows: vector SRIF-β-gal was obtained by cloning the rat somatostatin promoter (−71/+51) at BglV-HindIII site in the pβgal-Basic Vector (Clontech). Eight (8) copies of cAMP response element were obtained by PCR from an adenovirus template AdpCF126CCRE8 (see, 7


Human Gene Therapy


1883 (1996)) and cloned into the SRIF-β-gal vector at the Kpn-BglV site, resulting in the 8xCRE-β-gal reporter vector. The 8xCRE-Luc reporter plasmid was generated by replacing the beta-galactosidase gene in the 8xCRE-p-gal reporter vector with the luciferase gene obtained from the pGL3-basic vector (Promega) at the HindIII-BamHI site. Following 30 min. incubation at room temperature, the DNA/lipid mixture was diluted with 400 μl of DMEM and 100 μl of the diluted mixture was added to each well. 100 μl of DMEM with 10% FCS were added to each well after a 4 hr incubation in a cell culture incubator. The following day the transfected cells were changed with 200 μl/well of DMEM with 10% FCS. Eight (8) hours later, the wells were changed to 100 μl/well of DMEM without phenol red, after one wash with PBS. Luciferase activity were measured the next day using the LucLite™ reporter gene assay kit (Packard) following manufacturer instructions and read on a 1450 MicroBeta™ scintillation and luminescence counter (Wallac).





FIG. 3A

represents about a 63% increase in activity of the non-endogenous, constitutively active version of human Dopamine D1 receptor (189270 relative light units) compared with that of the endogenous Dopamine D1 (70622 relative light units).





FIG. 3B

represents about a 48% decreases in activity of the non-endogenous, constitutively active version of human OPRM (a Gi coupled receptor; see Example 4(3)), about a 53% decrease in activity of the non-endogenous, constitutively active version of human 5-HT1A (a Gi coupled receptor; see Example 4(3)), about a 91% increase in activity of the non-endogenous, constitutively active version of human 5-HT1B, and about a 20% increase in activity of the non-endogenous, constitutively active version of human 5-HT2B over the respective endogenous version of the GPCR.





FIG. 3C

represents about a 29% increase in activity of the non-endogenous, constitutively active version of human CCR3, about a 41% increase in activity of the non-endogenous, constitutively active version of human NTSR1, about a 51% increase in activity of the non-endogenous, constitutively active version of human CB2, and about a 40% decrease in activity of the non-endogenous, constitutively active version of human CXCR4 (a Gi coupled receptor; see Example 4(3)) over the respective endogenous version of the GPCR.





FIG. 3D

represents about a 75% increase in activity of the non-endogenous, constitutively active version of human PTHR1, about a 74% increase in activity of the non-endogenous, constitutively active version of human PTHR2, about a 56% increase in activity of the non-endogenous, constitutively active version of human SCTR, about a 96% increase in activity of the non-endogenous, constitutively active version of human PACAP, about a 88% increase in activity of the non-endogenous, constitutively active version of human VIPR1, and about a 91% increase in activity of the non-endogenous, constitutively active version of human VIPR2 over the respective endogenous version of the GPCR.





FIG. 3E

represents about a 51% increase in activity of the non-endogenous, constitutively active version of human NTSR1, about a 31% decrease in activity of the non-endogenous, constitutively active version of human M1, about a 19% decrease in activity of the non-endogenous, constitutively active version of human M2, about a 32% increase in activity of the non-endogenous, constitutively active version of human M3, about a 33% decrease in activity of the non-endogenous, constitutively active version of human M4, about a 17% decrease in activity of the non-endogenous, constitutively active version of human M5, and about a 60% increase in activity of the non-endogenous, constitutively active version of human 5-HT1D over the respective endogenous version of the GPCR. M2, M4 and 5-HT1D are indicated as being Gi coupled while NTSR1, M1, M3 and M5 are indicated as being Gq coupled.




3. AP1 Reporter Assay (Gq-Associated Receptors)




A method to detect Gq stimulation depends on the known property of Gq-dependent phospholipase C to cause the activation of genes containing AP1 elements in their promoter. A PATHDETECT™ AP-1 cis-Reporting System (Stratagene, Catalog #219073) can be utilized following the protocol set forth above with respect to the CREB reporter assay, except that the components of the calcium phosphate precipitate were 410 ng pAP1-Luc, 80 ng pCMV-receptor expression plasmid, and 20 ng CMV-SEAP.




4. SRF-Luc Reporter Assay (Gq-Associated Receptors)




One method to detect Gq stimulation depends on the known property of Gq-dependent phospholipase C to cause the activation of genes containing serum response factors in their promoter. A PATHDETECT™ SRF-Luc-Reporting System (Stratagene) can be utilized to assay for Gq coupled activity in, e.g., COS7 cells. Cells are transfected with the plasmid components of the system and the indicated expression plasmid encoding endogenous or non-endogenous GPCR using a MAMMALIAN TRANSFECTION™ Kit (Stratagene, Catalogue #200285) according to the manufacturer's instructions. Briefly, 410 ng SRF-Luc, 80 ng pCMV-receptor expression plasmid and 20 ng CMV-SEAP (secreted alkaline phosphatase expression plasmid; alkaline phosphatase activity is measured in the media of transfected cells to control for variations in transfection efficiency between samples) are combined in a calcium phosphate precipitate as per the manufacturer's instructions. Half of the precipitate is equally distributed over 3 wells in a 96-well plate, kept on the cells in a serum free media for 24 hours. The last 5 hours the cells are incubated with 1 μM Angiotensin, where indicated. Cells are then lysed and assayed for luciferase activity using a LUCLITE™ Kit (Packard, Cat. #6016911) and “Trilux 1450 Microbeta” liquid scintillation and luminescence counter (Wallac) per the manufacturer's instructions. The data can be analyzed using GraphPad Prism™ 2.0a (GraphPad Software Inc.).




5. Intracellular IP


3


Accumulation Assay (Gq-Associated Receptors)




On day 1, cells comprising the receptors (endogenous and/or non-endogenous) can be plated onto 24 well plates, usually 1×10


5


cells/well (although this number can be optimized. On day 2 cells can be transfected by firstly mixing 0.25 μg DNA in 50 μL serum free DMEM/well and 2 μL lipofectamine in 50 μl serum-free DMEM/well. The solutions are gently mixed and incubated for 15-30 min at room temperature. Cells are washed with 0.5 ml PBS and 400 μl of serum free media is mixed with the transfection media and added to the cells. The cells are then incubated for 3-4 hrs at 37° C./5% CO


2


and then the transfection media is removed and replaced with 1 ml/well of regular growth media. On day 3 the cells are labeled with


3


H-myo-inositol. Briefly, the media is removed and the cells are washed with 0.5 ml PBS. Then 0.5 ml inositol-free/serum free media (GIBCO BRL) is added/well with 0.25 μCi of


3


H-myo-inositol/well and the cells are incubated for 16-18 hrs o/n at 37° C./5% CO


2


. On Day 4 the cells are washed with 0.5 ml PBS and 0.45 ml of assay medium is added containing inositol-free/serum free media 10 μM pargyline 10 mM lithium chloride or 0.4 ml of assay medium and 50 μL of 10× ketanserin (ket) to final concentration of 10 μM. The cells are then incubated for 30 min at 37° C. The cells are then washed with 0.5 ml PBS and 200 μL of fresh/ice cold stop solution (1M KOH; 18 mM Na-borate; 3.8 mM EDTA) is added/well. The solution is kept on ice for 5-10 min or until cells were lysed and then neutralized by 200 μl of fresh/ice cold neutralization sol. (7.5% HCL). The lysate is then transferred into 1.5 ml eppendorf tubes and 1 ml of chloroform/methanol (1:2) is added/tube. The solution is vortexed for 15 sec and the upper phase is applied to a Biorad AG1-X8™ anion exchange resin (100-200 mesh). Firstly, the resin is washed with water at 1:1.25 W/V and 0.9 ml of upper phase is loaded onto the column. The column is washed with 10 mls of 5 mM myo-inositol and 10 ml of 5 mM Na-borate/60 mM Na-formate. The inositol tris phosphates are eluted into scintillation vials containing 10 ml of scintillation cocktail with 2 ml of 0.1 M formic acid/1 M ammonium formate. The columns are regenerated by washing with 10 ml of 0.1 M formic acid/3M ammonium formate and rinsed twice with H


2


O and stored at 4° C. in water.





FIG. 4

represents two preferred non-endogenous, constitutively activated exemplary versions of GPR24, 24-IC3-SST2 and I261Q, for use in an IP3 assay. When compared to the endogenous version of GPR24 (“GPR24 wt”), 24-IC3-SST2 evidenced about a 27% increase in IP


3


accumulation, while the I26Q version represented and about a 32% increase.




Example 6




GPCR Fusion Protein Preparation




The design of the constitutively activated GPCR-G protein fusion construct was accomplished as follows: both the 5′ and 3′ ends of the rat G protein Gsoa (long form; Itoh, H. et al., 83 PNAS 3776 (1986)) were engineered to include a HindIII (5′-AAGCTT-3′) sequence thereon. Following confirmation of the correct sequence (including the flanking HindIII sequences), the entire sequence was shuttled into pcDNA3.1(−) (Invitrogen, cat. no. V795-20) by subcloning using the HindIII restriction site of that vector. The correct orientation for the Gsu. sequence was determined after subcloning into pcDNA3.1(−). The modified pcDNA3.1(−) containing the rat Gscc gene at HindIII sequence was then verified; this vector was now available as a “universal” Gscc protein vector. The pcDNA3.1 (−) vector contains a variety of well-known restriction sites upstream of the HindIII site, thus beneficially providing the ability to insert, upstream of the Gs protein, the coding sequence of an endogenous, constitutively active GPCR. This same approach can be utilized to create other “universal” G protein vectors, and, of course, other commercially available or proprietary vectors known to the artisan can be utilized—the important criteria is that the sequence for the GPCR be upstream and in-frame with that of the G protein.




1. TSHR-Gsα Fusion Protein




a. Stable Cell Line Production for TSHR




Approximately 1.2 to 1.3×10


7


HEK-293 cells are plated on a 15 cm tissue culture plate. Grown in DME High Glucose Medium containing ten percent fetal bovine serum and one percent sodium pyruvate, L-glutamine, and antibiotics. Twenty-four hours following plating of 293 cells to ˜80% confluency, the cells are transfected using 12 μg of DNA. The 12 μg of DNA is combined with 60 μL of lipofectamine and 2 mL of DME High Glucose Medium without serum. The medium is aspirated from the plates and the cells are washed once with medium without serum. The DNA, lipofectamine, and medium mixture is added to the plate along with 10 mL of medium without serum. Following incubation at 37° C. for four to five hours, the medium is aspirated and 25 ml of medium containing serum is added. Twenty-four hours following transfection, the medium is aspirated again, and fresh medium with serum is added. Forty-eight hours following transfection, the medium is aspirated and medium with serum is added containing geneticin (G418 drug) at a final concentration of 500 μg/mL. The transfected cells now undergo selection for positively transfected cells containing the G418 resistant gene. The medium is replaced every four to five days as selection occurs. During selection, cells are grown to create stable pools, or split for stable clonal selection.




b. TSHR(A623K) Fusion Protein




TSHR-Gsα Fusion Protein construct was then made as follows: primers were designed for both endogenous, constitutively activated and non-endogenous, constitutively activated TSAR were as follows:













(SEQ.ID.NO.:582; sense)    












5′-gatc[TCTAGA]ATGAGGCCGGCGGACTTGCTGC-3′



















(SEQ.ID.NO.:583; antisense)












5′-ctag[GATATC]CGCAAAACCGTTTGCATATACTC-3′.











Nucleotides in lower caps are included as spacers just before the restriction sites between the endogenous TSHR and G protein. The sense and anti-sense primers included the restriction sites for XbaI and EcorV, respectively.




PCR was then utilized to secure the respective receptor sequences for fusion within the Gsα universal vector disclosed above, using the following protocol for each: 100 ng cDNA for TSHR(A623K) was added to separate tubes containing 2 μL of each primer (sense and anti-sense), 3 μL of 10 mM dNTPs, 10 μL of 10×TaqPlus™ Precision buffer, 1 μL of TaqPlus™ Precision polymerase (Stratagene: #600211), and 80 μL of water. Reaction temperatures and cycle times for TSHR were as follows: the initial denaturing step was done at 94° C. for five minutes, and a cycle of 94° C. for 30 seconds; 55° C. for 30 seconds; 72° C. for two minutes. A final extension time was done at 72° C. for ten minutes. PCR product for was run on a 1% agarose gel and then purified (data not shown). The purified product was digested with XbaI and EcorV (New England Biolabs) and the desired inserts isolated, purified and ligated into the Gs universal vector at the respective restriction site. The positive clones were isolated following transformation and determined by restriction enzyme digest; expression using Hek-293 cells was accomplished following the protocol set forth infra. Each positive clone for TSHR: Gs-Fusion Protein was sequenced and made available for the direct identification of candidate compounds. (See, SEQ. ID. NO.:588 for nucleic acid sequence and SEQ. ID. NO.:589 for amino acid sequence).




Location of non-endogenous version of TSHR(A623K) is located upstream from the rat G protein Gsox (i.e., from nucleotide 1 through 2,292; see, SEQ. ID. NO.:586 and amino acid residue 1 through 764; see, SEQ. ID. NO.:587). TSHR(A623K) can be linked directly to the G protein, or there can be spacer residues between the two. With respect to TSHR, 24 amino acid residues (an equivalent of 72 nucleotides) were placed in between the non-endogenous GPCR and the start codon for the G protein Gsu. Therefore, the Gs protein is located at nucleotide 2,365 through 3,549 (see, SEQ. ID. NO.:586) and at amino acid residue 789 through 1,183 (see, SEQ. ID. NO.:587). Those skilled in the art are credited with the ability to select techniques for constructing a GPCR Fusion Protein where the G protein is fused to the 3′ end of the GPCR of interest.




GPCR Fusion Protein was analyzed (to stabilize the GPCR while screening for candidate compounds, as shown in Example 6) and verified to be constitutively active utilizing the protocol found in Example 4(2). In

FIG. 5

, TSHR(A623K)-Gαs:Fusion Protein evidenced about an 87% increase in cAMP when compared to the control vector (pCMV).




2. GPR24-Giα Fusion Protein




GPR24-Giα Fusion Protein construct was then made as follows: primers were designed for both endogenous, constitutively activated and non-endogenous, constitutively activated GPR24 were as follows:













(SEQ.ID.NO.:584; sense)    















5′-GTGAAGCTTGCCCGGGCAGGATGGACCTGG-3′





















(SEQ.ID.NO.:585; antisense)















5′-ATCTAGAGGTGCCTTTGCTTTCTG-3′.












The sense and anti-sense primers included the restriction sites for KB4 and XbaI, respectively.




PCR was then utilized to secure the respective receptor sequences for fusion within the Gict universal vector disclosed above, using the following protocol for each: 100 ng cDNA for GPR24 was added to separate tubes containing 2 μL of each primer (sense and anti-sense), 3 μL of 10 mM dNTPs, 10 μL of 10×TaqPlus™ Precision buffer, 1 μL of TaqPlus™ Precision polymerase (Stratagene: #600211), and 80 μL of water. Reaction temperatures and cycle times for GPR24 were as follows: the initial denaturing step was done it 94° C. for five minutes, and a cycle of 94° C. for 30 seconds; 55° C. for 30 seconds; 72° C. for two minutes. A final extension time was done at 72° C. for ten minutes. PCR product for was run on a 1% agarose gel and then purified (data not shown). The purified product was digested with KB4 and XbaI (New England Biolabs) and the desired inserts will be isolated, purified and ligated into the Gi universal vector at the respective restriction site. The positive clones was isolated following transformation and determined by restriction enzyme digest; expression using Hek-293 cells was accomplished following the protocol set forth infra. Each positive clone for GPR24: Gi-Fusion Protein was sequenced and made available for the direct identification of candidate compounds. (See, SEQ. ID. NO.:590 for nucleic acid sequence and SEQ. ID. NO.:591 for amino acid sequence).




Endogenous version of GPR24 was fused upstream from the G protein Gi and is located at nucleotide 1 through 1,059 (see, SEE. ID. NO.:588) and amino acid residue 1 through 353 (see, SEQ. ID. NO.:589). With respect to GPR24, 2 amino acid residues (an equivalent of 6 nucleotides) were placed in between the endogenous (or non-endogenous) GPCR and the start codon for the G protein Giα. Therefore, the Gi protein is located at nucleotide 1,066 through 2,133 (see, SEQ. ID. NO.:588) and at amino acid residue 356 through 711 (see, SEQ. ID. NO.:589). Those skilled in the art are credited with the ability to select techniques for constructing a GPCR Fusion Protein where the G protein is fused to the 3′ end of the GPCR of interest.




Although it is indicated above that Gi coupled receptors, such as GPR24, can be used in conjunction with a co-transfection approach, this is in the context of cAMP based assays and is predicated upon the effect of Gi on cAMP levels. However, for other types of assays, such as a GTP based assay, the co-transfection approach is not essential. Thus for assays such as a GTP based assay, the GPCR Fusion Protein approach is preferred such that, with respect to a GTP based assay for GPR24, the GPR24:Gi Fusion Protein would be preferred.




Example 6




Protocol: Direct Identification of Inverse Agonists and Agonists Using [


35


S]GTPγS




Although Endogenous GPCRs may be utilized for the direct identification of candidate compounds as, e.g., inverse agonists, for reasons that are not altogether understood, intra-assay variation can become exacerbated. Preferably, then, a GPCR Fusion Protein, as disclosed above, can also be utilized with a non-endogenous, constitutively activated GPCR. We can determine that when such a protein is used, intra-assay variation appears to be substantially stabilized, whereby an effective signal-to-noise ratio is obtained. This has the beneficial result of allowing for a more robust identification of candidate compounds. Thus, it is preferred that for direct identification, a GPCR Fusion Protein be used and that when utilized, the following assay protocols be utilized.




1. Membrane Preparation




Membranes comprising the non-endogenous, constitutively active GPCR Fusion Protein of interest and for use in the direct identification of candidate compounds as inverse agonists, agonists or partial agonists are preferably prepared as follows:




a. Materials




“Membrane Scrape Buffer” is comprised of 20 mM HEPES and 10 mM EDTA, pH 7.4; “Membrane Wash Buffer” is comprised of 20 mM HEPES and 0.1 mM EDTA, pH 7.4; “Binding Buffer” is comprised of 20 mM HEPES, 100 mM NaCl, and 10 mM MgCl


2


, pH 7.4.




b. Procedure




All materials will be kept on ice throughout the procedure. First, the media is aspirated from a confluent monolayer of cells, followed by rinse with 10 ml cold PBS, followed by a aspiration. Thereafter, 5 ml of Membrane Scrape Buffer will be added to scrape cells; this is followed by transfer of cellular extract into 50 ml centrifuge tubes (centrifuged at 20,000 rpm for 17 minutes at 4° C.). Thereafter, the supernatant is aspirated and the pellet is resuspended in 30 ml Membrane Wash Buffer followed by centrifugation at 20,000 rpm for 17 minutes at 4° C. The supernatant will then be aspirated and the pellet resuspended in Binding Buffer. This is then homogenized using a Brinkman Polytron™ homogenizer (15-20 second bursts until the all material is in suspension). This is referred to herein as “Membrane Protein”.




2. Bradford Protein Assay




Following the homogenization, protein concentration of the membranes will be determined using the Bradford Protein Assay (protein can be diluted to about 1.5 mg/ml, aliquoted and frozen (−80° C.) for later use; when frozen, protocol for use is as follows: on the day of the assay, frozen Membrane Protein is thawed at room temperature, followed by vortex and then homogenized with a Polytron at about 12×1,000 rpm for about 5-10 seconds; it is noted that for multiple preparations, the homogenizer should be thoroughly cleaned between homogenization of different preparations).




a. Materials




Binding Buffer (as per above); Bradford Dye Reagent; Bradford Protein Standard are utilized, following manufacturer instructions (Biorad, cat. no. 500-0006).




b. Procedure




Duplicate tubes will be prepared, one including the membrane, and one as a control “blank”. Each contained 800 μL Binding Buffer. Thereafter, 10 μL of Bradford Protein Standard (1 mg/ml) is added to each tube, and 10 μL of membrane Protein is then added to just one tube (not the blank). Thereafter, 200 μL of Bradford Dye Reagent is added to each tube, followed by vortex of each. After five (5) minutes, the tubes will be re-vortexed and the material therein is transferred to cuvettes. The cuvettes are then read using a CECIL 3041 spectrophotometer, at wavelength 595.




3. Direct Identification Assay




a. Materials




GDP Buffer consists of 37.5 ml Binding Buffer and 2 mg GDP (Sigma, cat. no. G-7127), followed by a series of dilutions in Binding Buffer to obtain 0.2 μM GDP (final concentration of GDP in each well was 0.1 μM GDP); each well comprising a candidate compound, will have a final volume of 200 μL consisting of 100 μL GDP Buffer (final concentration, 0.1 μM GDP), 50 μL Membrane Protein in Binding Buffer, and 50 μL [


35


S]GTPγS (0.6 nM) in Binding Buffer (2.5 μL [


35


S]GTPγS per 10 ml Binding Buffer).




b. Procedure




Candidate compounds are preferably screened using a 96-well plate format (these can be frozen at −80° C.). Membrane Protein (or membranes with expression vector excluding the GPCR Fusion Protein, as control) will be homogenized briefly until in suspension. Protein concentration is then determined using the Bradford Protein Assay set forth above. Membrane Protein (and control) is then diluted to 0.25 mg/ml in Binding Buffer (final assay concentration, 12.5 μg/well). Thereafter, 100 μL GDP Buffer will be added to each well of a Wallac Scintistrip™ (Wallac). A 5 μL pin-tool is then used to transfer 5 μL of a candidate compound into such well (i.e., 5 μL in total assay volume of 200 μL is a 1:40 ratio such that the final screening concentration of the candidate compound is 10 μM). Again, to avoid contamination, after each transfer step the pin tool should be rinsed in three reservoirs comprising water (1×), ethanol (1×) and water (2×)—excess liquid should be shaken from the tool after each rinse and dried with paper and kimwipes. Thereafter, 50 μL of Membrane Protein is added to each well (a control well comprising membranes without the GPCR Fusion Protein is also utilized), and pre-incubated for 5-10 minutes at room temperature. Thereafter, 50 μL of [


35


S]GTPγS (0.6 nM) in Binding Buffer will be added to each well, followed by incubation on a shaker for 60 minutes at room temperature (again, in this example, plates were covered with foil). The assay is then stopped by spinning of the plates at 4000 RPM for 15 minutes at 22° C. The plates will then be aspirated with an 8 channel manifold and sealed with plate covers. The plates are then read on a Wallacc 1450 using setting “Prot. #37” (per manufacturer instructions).




Example 7




Protocol: Confirmation Assay




Using an independent assay approach to provide confirmation of a directly identified candidate compound as set forth above, it is preferred that a confirmation assay then be utilized. In this case, the preferred confirmation assay is a cyclase-based assay.




A modified FLASH PLATE™ Adenylyl Cyclase kit (New England Nuclear; Cat. No. SMP004A) is preferably utilized for confirmation of candidate compounds directly identified as inverse agonists and agonists to non-endogenous, constitutively activated GPCR in accordance with the following protocol.




Transfected cells will be harvested approximately three days after transfection. Membranes are prepared by homogenization of suspended cells in buffer containing 20 mM HEPES, pH 7.4 and 10 mM MgCl


2


. Homogenization is performed on ice using a Brinkman POLYTRON™ for approximately 10 seconds. The resulting homogenate will be centrifuged at 49,000×g for 15 minutes at 4° C. The resulting pellet is then resuspended in buffer containing 20 mM IEPES, pH 7.4 and 0.1 mM EDTA, homogenized for 10 seconds, followed by centrifugation at 49,000×g for 15 minutes at 4° C. The resulting pellet can be stored at −80° C. until utilized. On the day of direct identification screening, the membrane pellet is slowly thawed at room temperature, resuspended in buffer containing 20 mM HEPES, pH 7.4 and 10 mM MgCl


2


, to yield a final protein concentration of 0.60 mg/ml (the resuspended membranes are placed on ice until use).




cAMP standards and Detection Buffer (comprising 2 μCi of tracer [


125


I cAMP (100 μl)] to 11 ml Detection Buffer) will be prepared and maintained in accordance with the manufacturer's instructions. Assay Buffer will be prepared fresh for screening and contained 20 mM HEPES, pH 7.4, 10 mM MgCl


2


, 20 mM phospocreatine (Sigma), 0.1 units/ml creatine phosphokinase (Sigma), 50 μM GTP (Sigma), and 0.2 mM ATP (Sigma); Assay Buffer can be stored on ice until utilized.




Candidate compounds identified as per above (if frozen, thawed at room temperature) will then be added, preferably, to 96-well plate wells (3 μl/well; 12 μM final assay concentration), together with 40 μl Membrane Protein (30 μg/well) and 50 μl of Assay Buffer. This mixture is then incubated for 30 minutes at room temperature, with gentle shaking.




Following the incubation, 100 μl of Detection Buffer is added to each well, followed by incubation for 2-24 hours. Plates are then counted in a Wallac MICROBETA™ plate reader using “Prot. #31” (as per manufacturer instructions).




Example 8




Ligand-Based Confirmation Assay




Membranes will be prepared from transfected Hek-293 cells (see Example 3) by homogenization in 20 mM HEPES and 10 mM EDTA, pH 7.4 and centrifuged at 49,000×g for 15 min. The pellet will be resuspended in 20 mM HEPES and 0.1 mM EDTA, pH 7.4, homogenized for 10 sec using Polytron homogenizer (Brinkman) at 5000 rpm and centrifuged at 49,000×g for 15 min. The final pellet will be resuspended in 20 mM HEPES and 10 mM MgCl


2


, pH 7.4, homogenized for 10 sec using Polytron homogenizer (Brinkman) at 5000 rpm.




Ligand-based confirmation assays will be performed in triplicate 200 μl volumes in 96 well plates. Assay buffer (20 mM HEPES and 10 mM MgCl


2


, pH 7.4) will be used to dilute membranes, tritiated inverse agonists and/or agonists and the receptor's endogenous ligand (used to define non-specific binding). Final assay concentrations will consist of 1 nM of tritiated inverse agonist and/or agonist, 50 μg membrane protein (comprising the receptor) and 100 μm of endogenous ligand. Agonist assay will be incubated for 1 hr at 37° C., while inverse agonist assays are incubated for 1 hr at room temperature. Assays will terminate by rapid filtration onto Wallac Filtermat Type B with ice cold binding buffer using Skatron cell harvester. The radioactivity will be determined in a Wallac 1205 BetaPlate counter.




Again, this approach is used merely to understand the impact of the directly identified candidate compound on ligand binding. As those in the art will appreciate, it is possible that the directly identified candidate compounds may be allosteric modulators, (i.e., compounds that affect the functional activity of the receptor but which do not inhibit the endogenous ligand from binding to the receptor. Allosteric modulators include inverse agonists, partial agonists and agonists.




References cited throughout this patent document, including co-pending and related patent applications, unless otherwise indicated, are fully incorporated herein by reference. Modifications and extension of the disclosed inventions that are within the purview of the skilled artisan are encompassed within the above disclosure and the claims that follow.




Although a variety of expression vectors are available to those in the art, for purposes of utilization for both the endogenous and non-endogenous known GPCRs, it is most preferred that the vector utilized be pCMV. This vector was deposited with the American Type Culture Collection (ATCC) on Oct. 13, 1998 (10801 University Blvd., Manassas, Va. 20110-2209 USA) under the provisions of the Budapest Treaty for the International Recognition of the Deposit of Microorganisms for the Purpose of Patent Procedure. The DNA was tested by the ATCC and determined to be. The ATCC has assigned the following deposit number to pCMV: ATCC #203351.














SEQUENCE LISTING











The patent contains a lengthy “Sequence Listing” section. A copy of the “Sequence Listing” is available in electronic form from the USPTO






web site (http://seqdata.uspto.gov/sequence.html?DocID=06806054B2). An electronic copy of the “Sequence Listing” will also be available from the






USPTO upon request and payment of the fee set forth in 37 CFR 1.19(b)(3).












Claims
  • 1. A method for directly identifying a non-endogenous compound as a compound having an activity selected from the group consisting of: inverse agonists, agonists, and partial agonists, to a non-endogenous, constitutively activated version of a known G protein-coupled receptor, said receptor comprising a transmembrane-6 region and an intracellular region, comprising the steps of:(a) selecting a non-endogenous version of a known GPCR; (b) confirming that the selected non-endogenous GPCR of step (a) is constitutively active; (c) contacting a non-endogenous candidate compound with the non-endogenous, constitutively activated GPCR of step of (b); and (d) determining, by measurement of the compound efficacy at said contacted receptor, whether said non-endogenous compound is an inverse agonist, an agonist, or a partial agonist to said receptor of step (b); wherein said receptor of step (b) comprises the amino acid sequence of SEQ ID NO:449.
  • 2. The method of claim 1 further comprising the following step:assessing, by using an endogenous ligand based assay, the impact of the non-endogenous compound of step (d) on the binding of an endogenous ligand for the known GPCR version of the non-endogenous version of said known GPCR of step (a) with said known GPCR.
  • 3. The method of claim 2 wherein said non-endogenous compound is an allosteric modulator of said known GPCR.
Parent Case Info

This patent application claims priority from U.S. Provisional Application No. 60/195,747, filed with the U.S. Patent and Trademark Office on Apr. 7, 2000, which is incorporated in its entirety by reference.

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Number Name Date Kind
6107324 Behan et al. Aug 2000 A
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WO 9500848 Jan 1995 WO
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Provisional Applications (1)
Number Date Country
60/195747 Apr 2000 US