The present disclosure relates to a grid for sampling a liquid specimen. The grid may be for sampling a liquid specimen for transmission electron microscopy (TEM) analysis.
Samples for single-particle cryo-electron microscopy are conventionally prepared by manually pipetting buffer solution containing proteins on a TEM grid carrier. The grid is subsequently blotted by filter paper and vitrified in liquid ethane. In this process, a few microliters of sample may be applied to wet the entire grid, of which 99.99% is then removed. In addition, different blotting conditions (for example, variations in blot force and the irregular pattern of fibers in filter paper) may lead to unpredictable sample thickness.
Alternative ways of preparing samples have been developed to eliminate the blotting step. Some technologies dispense liquid in a controlled way but very locally, such as piezoelectric inkjet dispensing, pin printing technology, and microcapillary writing. Other technologies cover the entire grid using sprays, but they may suffer from distributions in droplet size and location, and sample losses.
In one implementation, the disclosure provides a grid for sampling a liquid specimen. The grid includes a first layer and a backing material supporting the first layer. The first layer includes a plurality of lanes, each lane having a first end configured to receive a droplet of the liquid specimen, a second end opposite the first end, and a length extending from the first end to the second end.
In another implementation, the disclosure provides a transmission electron microscopy (TEM) sample preparation system including a grid and an applicator. The grid is configured for sampling a liquid specimen. The grid includes a first layer having a plurality of lanes and a backing material supporting the first layer, each lane having a first end configured to receive the liquid specimen, a second end opposite the first end, and a length extending from the first end to the second end. The backing material defines a bottom of each lane. The applicator is configured to apply a droplet of the liquid specimen onto each lane such that spontaneous capillary flow of the liquid specimen occurs.
In another implementation, the disclosure provides a method of preparing a liquid specimen. The method includes providing a grid. The grid includes a first layer having a plurality of lanes and a backing material supporting the first layer, each lane having a first end configured to receive the liquid specimen, a second end opposite the first end, and a length extending from the first end to the second end. The backing material defines a bottom of each lane. The method also includes applying droplets of the liquid specimen onto the first end of each of the plurality of lanes such that the plurality of lanes is filled via spontaneous capillary flow.
Other aspects of the disclosure will become apparent by consideration of the detailed description and accompanying drawings.
Before any implementations of the disclosure are explained in detail, it is to be understood that the disclosure is not limited in its application to the details of construction and the arrangement of components set forth in the following description or illustrated in the following drawings. The disclosure is capable of other implementations and of being practiced or of being carried out in various ways.
The present disclosure relates to a sample preparation system 10 for sampling a liquid specimen 14. The sample preparation system 10 is configured to prepare the liquid specimen 14 for analysis in charged particular microscopy, such as by a transmission electron microscope (TEM). The illustrated application is only one example, and the sample preparation system 10 may be utilized in any sampling application, especially when sampling a liquid specimen 14.
As illustrated in
The grid 22 includes a backing material 40 and a first layer 42. The backing material 40 may be any of a plurality of different materials (e.g., foil, metal, plastic, ceramic, silicon nitride). The backing material 40 defines the back side 38 of the grid 22, and the first layer 42 defines the front side 34 of the grid 22. The backing material 40 and the first layer 42 are substantially the same shape and size. In the illustrated embodiment, both the backing material 40 and the first layer 42 are circular in shape. In alternate embodiments, the first layer 42 and the backing material 40 may be a different shape (e.g., square, rectangular, trapezoidal, etc.), or the first layer 42 may have a different shape from the backing material 40 (e.g., the first layer 42 may be circular and the backing material 40 may be square).
In the illustrated embodiment, the first layer 42 is hydrophilic and the backing material 40 is hydrophilic. In alternate embodiments, the first layer 42 may not be hydrophilic and/or the backing material 40 may not be hydrophilic.
The first layer 42 includes a plurality of slots 46. Each slot 46 defines a lane 50. The lanes 50 are configured to separate each droplet 26 of the liquid specimen 14 such that multiple specimens may be received on the grid 22. In some embodiments, each lane 50 may receive a different specimen. In other embodiments, each lane 50 may receive the same specimen. For example, a first liquid specimen may be placed in a first half 52 of the plurality of lanes 50 and a second liquid specimen may be placed in a second half 53 of the plurality of lanes 50. In some embodiments, each lane 50 may receive multiple liquid specimens 50. Alternatively, each of the plurality of lanes 50 may receive a different liquid specimen 14. In other embodiments, the two or more different liquid specimens 14 may be placed in a single lane 50. In some embodiments, the lanes 50 may have a single inlet configured to be fed by a single droplet 26. Alternately, multiple inlets may be configured to be fed by different droplets 26 and lead the droplets 26 to a single lane 50. Evaporation may be closely monitored and controlled while the printer 18 prints the droplets 26 into each lane 50 to inhibit one lane 50 from drying out before the next lane 50 is filled with the liquid specimen 14.
With respect to an orientation of the grid 22 shown in
Referring to
In some embodiments (See
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The mesh 42A has a mesh thickness 95, and the backing material 40 has a backing thickness 96. In the illustrated embodiment, the mesh thickness 95 is about 15 micrometers, and the backing thickness 96 is about 10 nanometers. For example, the mesh thickness 95 may be in a range from 5-35 micrometers, and the backing thickness 96 may be in a range from 5-50 nanometers. In other embodiments, the mesh thickness 95 and/or the backing thickness 96 may be thicker or thinner.
With reference to
In the embodiment shown in
The foil 42B has a foil thickness 63, the wafer 40B has a wafer thickness 64, and the lanes 50 have a lane thickness 65. In the illustrated embodiment, the foil thickness is about 350 nanometers, the wafer thickness is about 100 micrometers, and the lane thickness is about 300 nm. The foil thickness 63 may be in a range from 100 to 500 nanometers, the wafer thickness 64 may be in a range from 50 to 300 micrometers, and the lane thickness 65 may be in a range from 100 to 500 nanometers. In other embodiments, the foil thickness 63, wafer thickness 64, and/or lane thickness 65 may be thicker or thinner. The wafer thickness 64 is configured to be sizably larger than the foil thickness 63 to provide robust support and rigidity for the foil 42B.
In the present embodiment, the lane thickness 65 may be between 100 and 500 nanometers. As such, the specimen thickness 122 may similarly vary between 100 and 500 nanometers. In other embodiments, the specimen thickness 122 may have other nominal thicknesses. The specimen thickness 122 varies between the sidewalls 106 because the liquid specimen 14 defines a concave meniscus in the lane 50. In other embodiments, the specimen thickness 122 may be constant or convex (e.g., in cases of overfilling). In the present embodiment, the liquid specimen 14 may overfill the grid 22 due to the lane thickness 65.
With reference to
As shown in
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Referring to
For SFC to occur the aspect ratio may be below a critical aspect ratio which is determined by the contact angle between liquid and the walls of the lane 50. For example, assuming a constant contact angle of 30 degrees, the critical aspect ratio is estimated to be 13. Alternatively, assuming a constant contact angle of 20 degrees, the critical aspect ratio is estimated to be 31. Other critical aspect ratios are obtained for other contact angles, or heterogeneous contact angles (i.e. different contact angle of the first layer 42 and foil 40). Following the principle of SFC, the droplet 26 spreads throughout the lane 50 until the lane 50 has a substantially constant thickness of the liquid specimen 14 throughout the length of the lane 50.
With reference to
As one example, the electronic controller 138 may be configured to control movement of the printer 18. For example, the electronic controller 138 may control rotation of the printer 18. The electronic controller 138 may also be configured to control the position or linear translation of the printer 18 in 3-dimensional space, e.g., to move the printer 18 to print the droplet 26 into each lane 50, which may include moving in the X-direction, the Y-direction, and/or the Z-direction, in any combination or orientation. The electronic controller 138 may further be configured to communicate with the printer 18 when it is appropriate to print (i.e., when the printer 18 is in the correct position above a lane 50). This may be done by using a sensor 158 to detect the location of the printer 18 and the corresponding lanes 50. The sensor may be an optical sensor, proximity sensor, accelerometer, or any other sensor of the like.
At step 801, a user provides the grid 22. The grid 22 includes the first layer 42 on the front side 34 and the backing material 40 on the back side 38. In the embodiment of this method, the backing material 40 is a foil. The first layer 42 defines the plurality of lanes 50, and the backing material 40 supports the first layer 42. Each lane 50 includes the first end 98 and the second end 99. The first end 98 is configured to receive the liquid specimen 14 in a later step (step 802). The second end 99 is opposite the first end 98. The length 100 extends from the first end 98 to the second end 99. The backing material 40 defines the bottom 110 of each lane 50. The lanes 50 have the height 134 and the width 130 and the aspect ratio of, for example, 20. Prior to this step, the first layer 42 and the grid 22 may be aligned by the user or by an alignment device (not shown) such as a micromanipulator.
At step 802, droplets 26 of the liquid specimen 14 are applied into each lane 50. The droplets 26 are inserted on the first layer 42 side. The droplets 26 are further inserted onto the first end 98 of each of the plurality of lanes 50. Each droplet 26 may be the same liquid specimen 14, or each droplet 26 may be a different liquid specimen 14. In some embodiments, applying the droplets 26 includes printing the droplets 26 of the liquid specimen 14 using the inkjet printer 18. The printer 18 may use the sensor 158 to detect the location of each lane 50. In other embodiments or methods, the printer 18 may print the droplet 26 into each lane 50 on the back side 38. In still other embodiments, the droplets 26 may be applied by a pipette or other suitable tool. In response to the hydrophilicity and aspect ratio of the lanes 50, each droplet 26 spontaneously spreads through each lane 50 via spontaneous capillary flow.
At step 803, the liquid specimen 14 is vitrified. In some embodiments, the liquid specimen 14 is vitrified by inserting the grid 22 into a bath of liquid ethane to complete the sample preparation process. The grid 22 may be inserted into the bath by the user, by a micromanipulator, or a manipulation tool (e.g., tweezers, clamps, etc.). Alternatively, a jet of the liquid ethane may be directed at the grid 22. In alternate embodiments, the liquid specimen 14 may be inserted into a bath of a different liquid.
After the liquid specimen is prepared, a user may analyze the liquid specimen using a charged particle microscope, such as a TEM.
The aspect ratio and hydrophilicity of the lanes 50 provide advantages. If the lanes 50 had an aspect ratio such that SCF did not occur, the liquid specimen 14 may have a non-uniform thickness 122 or the lanes 50 may not fill at all. The aspect ratio and hydrophilicity of the lanes 50 ensure that SCF occurs, which allows for a reproducible liquid specimen thickness 122. This provides for repeatability of sample thickness 122 during each sample preparation procedure. Evaporation of the liquid specimen 14 may also be taken advantage of to determine the final thickness 122. Alternately, a filter paper may be used to blot and thin the liquid specimen 14. The filter paper may be used to blot the entire lane 50 or to blot only the inlet. The inkjet printer 18 provides further advantages. If a sample (such as the liquid specimen 14) is inserted onto the grid 22 without a printer 18, sample loss may occur. The use of the inkjet printer 18 reduces sample losses by precisely printing small droplets 26 of the liquid specimen 14 into each lane 50—a precision that could not be easily replicated by another tool (e.g., a pipette).
Various features and advantages of the invention are set forth in the following claims.
This application claims priority to U.S. Provisional Patent Application No. 63/579,244 filed on Aug. 28, 2023, the entire content of which is incorporated herein by reference.
Number | Date | Country | |
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63579244 | Aug 2023 | US |